Pregenerated sensors for CALR4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028558Ensembl transcript IDs: ENSMUST00000030285.8, ENSMUST00000106628.8, ENSMUST00000106629.8, ENSMUST00000106631.9
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAGGGCCATTTCATGAGATAAAATTATCATTCCCTTTCTACCAATaGGCAAATAGAGCAGGGAAGGGGAGTAGAACTATAAATCCAAAG | + |
|
Preference number: 1 (lower is better) Translates to: QGPFHEIKLSFPFYQ*ANRAGKGSRTINPK Trigger: CTTTGGATTTATAGTTCTACTCCCCTTCCCTGCTCTATTTGCTCATTGGTAGAAAGGGAATGATAATTTTATCTCATGAAATGGCCCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATTCTCTAAGCACCGTCTCTaGCTTCGGCCACACCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: RHCLIQSQGPFHEIKLSFSKHRL*LRPHPV Trigger: CACTGGGTGTGGCCGAAGTCAGAGACGGTGCTTAGA...GAATGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| 3UTR-3UTR TCA 90 bp | TACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATCTAAGCACCGTCTCTaGCTTCGGCCACACCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: YRHCLIQSQGPFHEIKLSSKHRL*LRPHPV Trigger: CACTGGGTGTGGCCGAAGTCAGAGACGGTGCTTAGA...TGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| 3UTR-3UTR TCA 90 bp | AACATAAGGCAAGAGCAGCAGGCAAACAAGGTGACTTTCATGAAGTATTTTTCCTCTAAGCACCGTCTCTaGCTTCGGCCACACCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: NIRQEQQANKVTFMKYFSSKHRL*LRPHPV Trigger: CACTGGGTGTGGCCGAAGTCAGAGACGGTGCTTAGA...GGAAAAATACTTCATGAAAGTCACCTTGTTTGCCTGCTGCTCTTGCCTTATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106631.9 |
||
| 3UTR-3UTR CCA 90 bp | ACTTTCATGAAGTATTTTTCCAAACGTCCAAAGGATGTTCTGCTTTTGGCTTTATACAAGTATTTACTTTaGGCATGTTACAGGCATTGC | + |
|
Preference number: 2 (lower is better) Translates to: TFMKYFSKRPKDVLLLALYKYLL*ACYRHC Trigger: GCAATGCCTGTAACATGCCCAAAGTAAATACTTGTA...TAAAGCCAAAAGCAGAACATCCTTTGGACGTTTGGAAAAATACTTCATGAAAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106631.9 |
||
| 3UTR GCA 72 bp | TTTTACAAGTATTTACTTTGGGCATGTTACAGGCATTaGCTCATTCAGTCCCAAGGGCCATTTCATGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: FYKYLLWACYRH*LIQSQGPFHEI Trigger: TATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTTGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR GCA 90 bp | CAAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCGTCCTCCTGGTTCAGTaGGGCAGGAAAGAGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVFTLGMLQALPHSVPRAVLLVQ*GRKEFH Trigger: GTGAAACTCTTTCCTGCCGCACTGAACCAGGAGGAC...GGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS-3UTR GCA 90 bp | AAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCACTTGAGCCTTTCCTCTaGTTCCTCCTCGTCGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KYLLWACYRHCLIQSQGPLEPFL*FLLVVL Trigger: GAGGACGACGAGGAGGAAGCAGAGGAAAGGCTCAAG...TGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR GCA 90 bp | AAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCACTGCCTGATTTCACCTaGCAAAGATCCAGACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KYLLWACYRHCLIQSQGPLPDFT*QRSRPR Trigger: CCTTGGTCTGGATCTTTGGCAGGTGAAATCAGGCAG...TGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR GCA 90 bp | CAAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCTACAGCTCTCTCCACTaGTGCTCCACATCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVFTLGMLQALPHSVPRAYSSLH*CSTSFL Trigger: AAGAAAGGATGTGGAGCAGCAGTGGAGAGAGCTGTA...GGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CCA 90 bp | AGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATCCCATTTCCTTaGTTTCCTGGCGTAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SIYFGHVTGIASFSPKGHFIPFP*FPGVGV Trigger: GACCCCTACGCCAGGAAACCAAGGAAATGGGATGAA...ATGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CCA 90 bp | AGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCATGGTCAGGCCTGTATTTaGGGTTGTCTATCTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SIYFGHVTGIASFSPKGHGQACI*GCLSLG Trigger: ACCCAGAGATAGACAACCCCAAATACAGGCCTGACC...ATGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCCTTTGTGAGAAAGGATaGCCTGTAGTCTGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QVFTLGMLQALPHSVPRALCEKG*PVVCCC Trigger: GCAACAACAGACTACAGGTCATCCTTTCTCACAAAG...GGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCAATTGGGGTTGTCAATaGTCCGAGGTTTCCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVFTLGMLQALPHSVPRANWGCQ*SEVSIL Trigger: GAGAATGGAAACCTCGGATCATTGACAACCCCAATT...GGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR TCA 90 bp | AAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCAGTCAAAGATGCTGCCTaGTTTCACCTGCCAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: KYLLWACYRHCLIQSQGPVKDAA*FHLPKI Trigger: GATCTTTGGCAGGTGAAATCAGGCAGCATCTTTGAC...TGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR TCA 90 bp | AGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCATGTCAAAGATGCTGCCTaGTTTCACCTGCCAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SIYFGHVTGIASFSPKGHVKDAA*FHLPKI Trigger: GATCTTTGGCAGGTGAAATCAGGCAGCATCTTTGAC...ATGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR GCA 90 bp | CAAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCAGCTCTCTCCACTGCTaGTCCACATCCTTTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QVFTLGMLQALPHSVPRASSLHC*STSFLN Trigger: ATTAAGAAAGGATGTGGAGCAGCAGTGGAGAGAGCT...GGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR GCA 90 bp | AGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTACAGCTCTCTCCACTaGTGCTCCACATCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SIYFGHVTGIASFSPKGHYSSLH*CSTSFL Trigger: AAGAAAGGATGTGGAGCAGCAGTGGAGAGAGCTGTA...ATGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR GCA 90 bp | AGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATTCCTTGAGCCTTTCCTCTaGTTCCTCCTCGTCGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RHCLIQSQGPFHEIKLSFLEPFL*FLLVVL Trigger: GAGGACGACGAGGAGGAAGCAGAGGAAAGGCTCAAG...GAATGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR GCA 90 bp | TACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCACTTGAGCCTTTCCTCTaGTTCCTCCTCGTCGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YRHCLIQSQGPFHEIKLSLEPFL*FLLVVL Trigger: GAGGACGACGAGGAGGAAGCAGAGGAAAGGCTCAAG...TGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCGCATCTTCTGTGGTCTaGAGACCTTTATCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVFTLGMLQALPHSVPRAASSVV*RPLSLS Trigger: AGAGAGAGATAAAGGTCTCCAGACCACAGAAGATGC...GGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS-3UTR CCA 90 bp | AGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTGTGATAGTGACCAATaGTGGGGTCAGGCCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: SIYFGHVTGIASFSPKGHCDSDQ*WGQACI Trigger: AATACAGGCCTGACCCCACCATTGGTCACTATCACA...ATGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR TCA 90 bp | AAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCACTTTGTGAGAAAGGATaGCCTGTAGTCTGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KYLLWACYRHCLIQSQGPLCEKG*PVVCCC Trigger: GCAACAACAGACTACAGGTCATCCTTTCTCACAAAG...TGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR TCA 90 bp | AGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCATCTTTGTGAGAAAGGATaGCCTGTAGTCTGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIYFGHVTGIASFSPKGHLCEKG*PVVCCC Trigger: GCAACAACAGACTACAGGTCATCCTTTCTCACAAAG...ATGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR GCA 90 bp | AGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCATAGCTCTCTCCACTGCTaGTCCACATCCTTTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SIYFGHVTGIASFSPKGHSSLHC*STSFLN Trigger: ATTAAGAAAGGATGTGGAGCAGCAGTGGAGAGAGCT...ATGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR GCA 90 bp | CTAAAAAGAATGAGTCGTTTTACTTCCCATAATTTGCTAAGCGAGGGCCCATTTCTTGAGCCTTTCCTCTaGTTCCTCCTCGTCGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKRMSRFTSHNLLSEGPFLEPFL*FLLVVL Trigger: GAGGACGACGAGGAGGAAGCAGAGGAAAGGCTCAAG...AAATGGGCCCTCGCTTAGCAAATTATGGGAAGTAAAACGACTCATTCTTTTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CCA 90 bp | AAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCAACTTGGCATCTTCTGTaGTCTGGAGACCTTTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KYLLWACYRHCLIQSQGPTWHLL*SGDLYL Trigger: GAGATAAAGGTCTCCAGACCACAGAAGATGCCAAGT...TGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS-3UTR GCA 90 bp | AGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATTCCTGCCTGATTTCACCTaGCAAAGATCCAGACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHCLIQSQGPFHEIKLSFLPDFT*QRSRPR Trigger: CCTTGGTCTGGATCTTTGGCAGGTGAAATCAGGCAG...GAATGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTCTCATTGCTGAATaGCTTAAACCTGGTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVFTLGMLQALPHSVPRAILIAE*LKPGGK Trigger: CTTTCCACCAGGTTTAAGCCATTCAGCAATGAGAAT...GGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS-3UTR CCA 90 bp | TACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATTCATCCCATTTCCTTaGTTTCCTGGCGTAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YRHCLIQSQGPFHEIKLSFIPFP*FPGVGV Trigger: GACCCCTACGCCAGGAAACCAAGGAAATGGGATGAA...TGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CCA 90 bp | AGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATTCGGTCAGGCCTGTATTTaGGGTTGTCTATCTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RHCLIQSQGPFHEIKLSFGQACI*GCLSLG Trigger: ACCCAGAGATAGACAACCCCAAATACAGGCCTGACC...GAATGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAAACAAGGTGACTTTCATGAAGTATTTTTCCAAACGTCCAAAGGATGTGGTCAGGCCTGTATTTaGGGTTGTCTATCTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGKQGDFHEVFFQTSKGCGQACI*GCLSLG Trigger: ACCCAGAGATAGACAACCCCAAATACAGGCCTGACC...ACATCCTTTGGACGTTTGGAAAAATACTTCATGAAAGTCACCTTGTTTGCCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106631.9 |
||
| CDS-3UTR TCA 90 bp | AGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTGTTTTACTGAAAACTaGACCACCAAGGTCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SIYFGHVTGIASFSPKGHCFTEN*TTKVSF Trigger: GAATGAGACCTTGGTGGTTCAGTTTTCAGTAAAACA...ATGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS-3UTR TCA 90 bp | AGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATTCGTCAAAGATGCTGCCTaGTTTCACCTGCCAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: RHCLIQSQGPFHEIKLSFVKDAA*FHLPKI Trigger: GATCTTTGGCAGGTGAAATCAGGCAGCATCTTTGAC...GAATGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR GCA 90 bp | CTAAAAAGAATGAGTCGTTTTACTTCCCATAATTTGCTAAGCGAGGGCCCATTTCTGCCTGATTTCACCTaGCAAAGATCCAGACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKRMSRFTSHNLLSEGPFLPDFT*QRSRPR Trigger: CCTTGGTCTGGATCTTTGGCAGGTGAAATCAGGCAG...AAATGGGCCCTCGCTTAGCAAATTATGGGAAGTAAAACGACTCATTCTTTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGCAAACAAGGTGACTTTCATGAAGTATTTTTCCAAACGTCCAAAGGATGTTACAGCTCTCTCCACTaGTGCTCCACATCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGKQGDFHEVFFQTSKGCYSSLH*CSTSFL Trigger: AAGAAAGGATGTGGAGCAGCAGTGGAGAGAGCTGTA...ACATCCTTTGGACGTTTGGAAAAATACTTCATGAAAGTCACCTTGTTTGCCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106631.9 |
||
| CDS-3UTR CCA 90 bp | CTAAAAAGAATGAGTCGTTTTACTTCCCATAATTTGCTAAGCGAGGGCCCATTTTTCATCCCATTTCCTTaGTTTCCTGGCGTAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKRMSRFTSHNLLSEGPFFIPFP*FPGVGV Trigger: GACCCCTACGCCAGGAAACCAAGGAAATGGGATGAA...AAATGGGCCCTCGCTTAGCAAATTATGGGAAGTAAAACGACTCATTCTTTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CCA 90 bp | CTAAAAAGAATGAGTCGTTTTACTTCCCATAATTTGCTAAGCGAGGGCCCATTTGGTCAGGCCTGTATTTaGGGTTGTCTATCTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKRMSRFTSHNLLSEGPFGQACI*GCLSLG Trigger: ACCCAGAGATAGACAACCCCAAATACAGGCCTGACC...AAATGGGCCCTCGCTTAGCAAATTATGGGAAGTAAAACGACTCATTCTTTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CCA 90 bp | AGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATTCTGTGATAGTGACCAATaGTGGGGTCAGGCCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: RHCLIQSQGPFHEIKLSFCDSDQ*WGQACI Trigger: AATACAGGCCTGACCCCACCATTGGTCACTATCACA...GAATGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CCA 90 bp | TACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATGTGATAGTGACCAATaGTGGGGTCAGGCCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: YRHCLIQSQGPFHEIKLSCDSDQ*WGQACI Trigger: AATACAGGCCTGACCCCACCATTGGTCACTATCACA...TGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CCA 90 bp | CATGAAGTATTTTTCCAAACGTCCAAAGGATGTTCTGCTTTTGGCTTTAGGTGCTGTGATAGTGACCAATaGTGGGGTCAGGCCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: HEVFFQTSKGCSAFGFRCCDSDQ*WGQACI Trigger: AATACAGGCCTGACCCCACCATTGGTCACTATCACA...GCACCTAAAGCCAAAAGCAGAACATCCTTTGGACGTTTGGAAAAATACTTCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106631.9 |
||
| CDS-3UTR TCA 90 bp | CTAAAAAGAATGAGTCGTTTTACTTCCCATAATTTGCTAAGCGAGGGCCCATTTGTAATACTGGGATTCTaGGTGCATGTCCTCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKRMSRFTSHNLLSEGPFVILGF*VHVLLV Trigger: AACCAGGAGGACATGCACTCAGAATCCCAGTATTAC...AAATGGGCCCTCGCTTAGCAAATTATGGGAAGTAAAACGACTCATTCTTTTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS-3UTR TCA 90 bp | TACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCAAATTGGGGTTGTCAATaGTCCGAGGTTTCCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YRHCLIQSQGPFHEIKLSNWGCQ*SEVSIL Trigger: GAGAATGGAAACCTCGGATCATTGACAACCCCAATT...TGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR TCA 90 bp | AACAATTGTTTAAACATAAGGCAAGAGCAGCAGGCAAACAAGGTGACTTTCATGGTCAAAGATGCTGCCTaGTTTCACCTGCCAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: NNCLNIRQEQQANKVTFMVKDAA*FHLPKI Trigger: GATCTTTGGCAGGTGAAATCAGGCAGCATCTTTGAC...CATGAAAGTCACCTTGTTTGCCTGCTGCTCTTGCCTTATGTTTAAACAATTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106631.9 |
||
| CDS-3UTR GCA 90 bp | CTAAAAAGAATGAGTCGTTTTACTTCCCATAATTTGCTAAGCGAGGGCCCATTTTACAGCTCTCTCCACTaGTGCTCCACATCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKRMSRFTSHNLLSEGPFYSSLH*CSTSFL Trigger: AAGAAAGGATGTGGAGCAGCAGTGGAGAGAGCTGTA...AAATGGGCCCTCGCTTAGCAAATTATGGGAAGTAAAACGACTCATTCTTTTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR TCA 90 bp | CTAAAAAGAATGAGTCGTTTTACTTCCCATAATTTGCTAAGCGAGGGCCCATTTAATTGGGGTTGTCAATaGTCCGAGGTTTCCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKRMSRFTSHNLLSEGPFNWGCQ*SEVSIL Trigger: GAGAATGGAAACCTCGGATCATTGACAACCCCAATT...AAATGGGCCCTCGCTTAGCAAATTATGGGAAGTAAAACGACTCATTCTTTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR GCA 90 bp | CTAAAAAGAATGAGTCGTTTTACTTCCCATAATTTGCTAAGCGAGGGCCCATTTAGCTCTCTCCACTGCTaGTCCACATCCTTTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKRMSRFTSHNLLSEGPFSSLHC*STSFLN Trigger: ATTAAGAAAGGATGTGGAGCAGCAGTGGAGAGAGCT...AAATGGGCCCTCGCTTAGCAAATTATGGGAAGTAAAACGACTCATTCTTTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR GCA 90 bp | AACAATTGTTTAAACATAAGGCAAGAGCAGCAGGCAAACAAGGTGACTTTCATGAGCTCTCTCCACTGCTaGTCCACATCCTTTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: NNCLNIRQEQQANKVTFMSSLHC*STSFLN Trigger: ATTAAGAAAGGATGTGGAGCAGCAGTGGAGAGAGCT...CATGAAAGTCACCTTGTTTGCCTGCTGCTCTTGCCTTATGTTTAAACAATTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106631.9 |
||
| CDS-3UTR CCA 90 bp | CTAAAAAGAATGAGTCGTTTTACTTCCCATAATTTGCTAAGCGAGGGCCCATTTTTGTCCATCCATCTGTaGAGAAAGGAGAGAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKRMSRFTSHNLLSEGPFLSIHL*RKERER Trigger: TCTCTCTCTCTCCTTTCTCCACAGATGGATGGACAA...AAATGGGCCCTCGCTTAGCAAATTATGGGAAGTAAAACGACTCATTCTTTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS-3UTR TCA 90 bp | TACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCAATCAGAGTGTACAGGTaGGTGTCTTTATTAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YRHCLIQSQGPFHEIKLSIRVYR*VSLLIL Trigger: CAGGATTAATAAAGACACTCACCTGTACACTCTGAT...TGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR TCA 90 bp | AGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATTCATCAGAGTGTACAGGTaGGTGTCTTTATTAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RHCLIQSQGPFHEIKLSFIRVYR*VSLLIL Trigger: CAGGATTAATAAAGACACTCACCTGTACACTCTGAT...GAATGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR GCA 90 bp | TACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCAAATTGTCAAAGATGCTaGCTGATTTCACCTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YRHCLIQSQGPFHEIKLSNCQRC*LISPAK Trigger: TTTGGCAGGTGAAATCAGGCAGCATCTTTGACAATT...TGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CCA 90 bp | AGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATTCCCACTTGTCACCTTCTaGTTGTCAATTTTAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RHCLIQSQGPFHEIKLSFPLVTF*LSILTS Trigger: TGAGGTTAAAATTGACAACCAGAAGGTGACAAGTGG...GAATGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR TCA 90 bp | CTAAAAAGAATGAGTCGTTTTACTTCCCATAATTTGCTAAGCGAGGGCCCATTTATCAGAGTGTACAGGTaGGTGTCTTTATTAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKRMSRFTSHNLLSEGPFIRVYR*VSLLIL Trigger: CAGGATTAATAAAGACACTCACCTGTACACTCTGAT...AAATGGGCCCTCGCTTAGCAAATTATGGGAAGTAAAACGACTCATTCTTTTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR TCA 90 bp | AACAATTGTTTAAACATAAGGCAAGAGCAGCAGGCAAACAAGGTGACTTTCATGATCAGAGTGTACAGGTaGGTGTCTTTATTAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NNCLNIRQEQQANKVTFMIRVYR*VSLLIL Trigger: CAGGATTAATAAAGACACTCACCTGTACACTCTGAT...CATGAAAGTCACCTTGTTTGCCTGCTGCTCTTGCCTTATGTTTAAACAATTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106631.9 |
||
| CDS GCA 90 bp | TGGGCTTCCTTCTGGTCCAGAGACGCCCTCGCTGCACTGCCTTCCTaGTTGAGCCTTTCCTCTGCTTCCTCCTCGTCGTCCTCTTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: WASFWSRDALAALPS*LSLSSASSSSSSSA Trigger: CGCTGAAGAGGACGACGAGGAGGAAGCAGAGGAAAGGCTCAAGCAGGAAGGCAGTGCAGCGAGGGCGTCTCTGGACCAGAAGGAAGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS TCA 90 bp | TCGCCTCATTCCAGTCATCTGGCTTCTTGGCATCCGGGTCTGGGATaGATTCAGAGTCCTCCCAGTCCTCAGGTTTCTTATCGTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SPHSSHLASWHPGLG*IQSPPSPQVSYRQD Trigger: ATCCTGACGATAAGAAACCTGAGGACTGGGAGGACTCTGAATTCATCCCAGACCCGGATGCCAAGAAGCCAGATGACTGGAATGAGGCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS CCA 90 bp | ATCCATCGCCTCATTCCAGTCATCTGGCTTCTTGGCATCCGGGTCTaGGATGAATTCAGAGTCCTCCCAGTCCTCAGGTTTCTTATCGTC | + |
|
Preference number: 5 (lower is better) Translates to: IHRLIPVIWLLGIRV*DEFRVLPVLRFLIV Trigger: GACGATAAGAAACCTGAGGACTGGGAGGACTCTGAATTCATCCCAGACCCGGATGCCAAGAAGCCAGATGACTGGAATGAGGCGATGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS GCA 90 bp | TCAGTGCGGCAGGAAAGAGTTTCACGTAGCCACCGCCGCAATCGATaGCTTGCTCGTGTTTTACTGAAAACTGAACCACCAAGGTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SVRQERVSRSHRRNR*LARVLLKTEPPRSH Trigger: ATGAGACCTTGGTGGTTCAGTTTTCAGTAAAACACGAGCAAGGCATCGATTGCGGCGGTGGCTACGTGAAACTCTTTCCTGCCGCACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS-3UTR CAA 90 bp | AAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCATCCCCAGACGTCCTCTaGCCTGGCTCTCTCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KYLLWACYRHCLIQSQGPSPDVL*PGSLLF Trigger: GAAAAGGAGAGAGCCAGGCAAGAGGACGTCTGGGGA...TGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | AGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTCCCCAGACGTCCTCTaGCCTGGCTCTCTCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SIYFGHVTGIASFSPKGHSPDVL*PGSLLF Trigger: GAAAAGGAGAGAGCCAGGCAAGAGGACGTCTGGGGA...ATGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS CCA 90 bp | GTTGTCAATGATCCGAGGTTTCCATTCTCCCATGTACTTGACGTTTaGTATCAAGGGCCCTTCCCACACTCCATCCATCGCCTCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VVNDPRFPFSHVLDV*YQGPFPHSIHRLIP Trigger: TGGAATGAGGCGATGGATGGAGTGTGGGAAGGGCCCTTGATACCAAACGTCAAGTACATGGGAGAATGGAAACCTCGGATCATTGACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | CAAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCGTTCATCCCATTTCCTaGGTTTCCTGGCGTAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QVFTLGMLQALPHSVPRAVHPIS*VSWRRG Trigger: ACCCCTACGCCAGGAAACCAAGGAAATGGGATGAAC...GGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | CAAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCTTTTCCCTCTTCTTCTaGGTCTCCTCCGCCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QVFTLGMLQALPHSVPRAFSLFF*VSSASF Trigger: GAAGGAGGCGGAGGAGACCAAGAAGAAGAGGGAAAA...GGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | CAAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCACCTGTAGTCTGTTGTaGCCAAAGCCACAGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QVFTLGMLQALPHSVPRATCSLL*PKPQMS Trigger: GGACATCTGTGGCTTTGGCAACAACAGACTACAGGT...GGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | AGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCATGTTCATCCCATTTCCTaGGTTTCCTGGCGTAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SIYFGHVTGIASFSPKGHVHPIS*VSWRRG Trigger: ACCCCTACGCCAGGAAACCAAGGAAATGGGATGAAC...ATGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS TCA 90 bp | TTTCACGTAGCCACCGCCGCAATCGATGCCTTGCTCGTGTTTTACTaGAAACTGAACCACCAAGGTCTCATTCTCATTGCTGAATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FHVATAAIDALLVFY*KLNHQGLILIAEWL Trigger: AAGCCATTCAGCAATGAGAATGAGACCTTGGTGGTTCAGTTTTCAGTAAAACACGAGCAAGGCATCGATTGCGGCGGTGGCTACGTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS GCA 90 bp | GCCTCCTTCTGTTTCTCCATTTCCTCATACAGCTCTCTCCACTGCTaGTCCACATCCTTTCTTAATCCCCAGGTCATATTTCCAACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASFCFSISSYSSLHC*STSFLNPQVIFPTS Trigger: AGAGGTTGGAAATATGACCTGGGGATTAAGAAAGGATGTGGAGCAGCAGTGGAGAGAGCTGTATGAGGAAATGGAGAAACAGAAGGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | CAAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCATGACCTGTAGTCTGTaGTTGCCAAAGCCACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QVFTLGMLQALPHSVPRAMTCSL*LPKPQM Trigger: CATCTGTGGCTTTGGCAACAACAGACTACAGGTCAT...GGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | CAAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCGGGTCTTTTATTTTCTaGGGAGGCAAGAAGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QVFTLGMLQALPHSVPRAGSFIF*GGKKSQ Trigger: CTGGGACTTCTTGCCTCCCAAGAAAATAAAAGACCC...GGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | TACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATCCCCAGACGTCCTCTaGCCTGGCTCTCTCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YRHCLIQSQGPFHEIKLSSPDVL*PGSLLF Trigger: GAAAAGGAGAGAGCCAGGCAAGAGGACGTCTGGGGA...TGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | CAAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCCACTTGAGGGTCTTGTaGTTCTCATGGTATTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QVFTLGMLQALPHSVPRAHLRVL*FSWYFP Trigger: AGGGAAATACCATGAGAACAACAAGACCCTCAAGTG...GGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | CAAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCAGGATCCTCTATCTGTaGTCGTTCATCCCATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QVFTLGMLQALPHSVPRARILYL*SFIPFP Trigger: AGGAAATGGGATGAACGACAACAGATAGAGGATCCT...GGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | CTAAAAAGAATGAGTCGTTTTACTTCCCATAATTTGCTAAGCGAGGGCCCATTTTCCCCAGACGTCCTCTaGCCTGGCTCTCTCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKRMSRFTSHNLLSEGPFSPDVL*PGSLLF Trigger: GAAAAGGAGAGAGCCAGGCAAGAGGACGTCTGGGGA...AAATGGGCCCTCGCTTAGCAAATTATGGGAAGTAAAACGACTCATTCTTTTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | AGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCATCTGCACTTGAGGGTCTaGTTGTTCTCATGGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SIYFGHVTGIASFSPKGHLHLRV*LFSWYF Trigger: GAAATACCATGAGAACAACAAGACCCTCAAGTGCAG...ATGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGAGCAGCAGGCAAACAAGGTGACTTTCATGAAGTATTTTTCCAAACGTCCGGGTCTTTTATTTTCTaGGGAGGCAAGAAGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARAAGKQGDFHEVFFQTSGSFIF*GGKKSQ Trigger: CTGGGACTTCTTGCCTCCCAAGAAAATAAAAGACCC...GGACGTTTGGAAAAATACTTCATGAAAGTCACCTTGTTTGCCTGCTGCTCTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | AAGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCAAGGATCCTCTATCTGTaGTCGTTCATCCCATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KYLLWACYRHCLIQSQGPRILYL*SFIPFP Trigger: AGGAAATGGGATGAACGACAACAGATAGAGGATCCT...TGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | AGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATTCTTTTCCCTCTTCTTCTaGGTCTCCTCCGCCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RHCLIQSQGPFHEIKLSFFSLFF*VSSASF Trigger: GAAGGAGGCGGAGGAGACCAAGAAGAAGAGGGAAAA...GAATGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | TACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCAACCTGTAGTCTGTTGTaGCCAAAGCCACAGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: YRHCLIQSQGPFHEIKLSTCSLL*PKPQMS Trigger: GGACATCTGTGGCTTTGGCAACAACAGACTACAGGT...TGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | CTAAAAAGAATGAGTCGTTTTACTTCCCATAATTTGCTAAGCGAGGGCCCATTTGTTCATCCCATTTCCTaGGTTTCCTGGCGTAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LKRMSRFTSHNLLSEGPFVHPIS*VSWRRG Trigger: ACCCCTACGCCAGGAAACCAAGGAAATGGGATGAAC...AAATGGGCCCTCGCTTAGCAAATTATGGGAAGTAAAACGACTCATTCTTTTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTAAACATAAGGCAAGAGCAGCAGGCAAACAAGGTGACTTTCATGAAGTATGTTCATCCCATTTCCTaGGTTTCCTGGCGTAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CLNIRQEQQANKVTFMKYVHPIS*VSWRRG Trigger: ACCCCTACGCCAGGAAACCAAGGAAATGGGATGAAC...ATACTTCATGAAAGTCACCTTGTTTGCCTGCTGCTCTTGCCTTATGTTTAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | AACAATTGTTTAAACATAAGGCAAGAGCAGCAGGCAAACAAGGTGACTTTCATGACCTGTAGTCTGTTGTaGCCAAAGCCACAGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NNCLNIRQEQQANKVTFMTCSLL*PKPQMS Trigger: GGACATCTGTGGCTTTGGCAACAACAGACTACAGGT...CATGAAAGTCACCTTGTTTGCCTGCTGCTCTTGCCTTATGTTTAAACAATTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | AGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATTCATGACCTGTAGTCTGTaGTTGCCAAAGCCACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RHCLIQSQGPFHEIKLSFMTCSL*LPKPQM Trigger: CATCTGTGGCTTTGGCAACAACAGACTACAGGTCAT...GAATGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | TACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCAGGGTCTTTTATTTTCTaGGGAGGCAAGAAGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YRHCLIQSQGPFHEIKLSGSFIF*GGKKSQ Trigger: CTGGGACTTCTTGCCTCCCAAGAAAATAAAAGACCC...TGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | AACAATTGTTTAAACATAAGGCAAGAGCAGCAGGCAAACAAGGTGACTTTCATGATGACCTGTAGTCTGTaGTTGCCAAAGCCACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: NNCLNIRQEQQANKVTFMMTCSL*LPKPQM Trigger: CATCTGTGGCTTTGGCAACAACAGACTACAGGTCAT...CATGAAAGTCACCTTGTTTGCCTGCTGCTCTTGCCTTATGTTTAAACAATTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | AGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATTCCACTTGAGGGTCTTGTaGTTCTCATGGTATTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RHCLIQSQGPFHEIKLSFHLRVL*FSWYFP Trigger: AGGGAAATACCATGAGAACAACAAGACCCTCAAGTG...GAATGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGCAAACAAGGTGACTTTCATGAAGTATTTTTCCAAACGTCCAAAGGATGTCACTTGAGGGTCTTGTaGTTCTCATGGTATTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AGKQGDFHEVFFQTSKGCHLRVL*FSWYFP Trigger: AGGGAAATACCATGAGAACAACAAGACCCTCAAGTG...ACATCCTTTGGACGTTTGGAAAAATACTTCATGAAAGTCACCTTGTTTGCCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | TACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCACTGCACTTGAGGGTCTaGTTGTTCTCATGGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: YRHCLIQSQGPFHEIKLSLHLRV*LFSWYF Trigger: GAAATACCATGAGAACAACAAGACCCTCAAGTGCAG...TGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGCAAACAAGGTGACTTTCATGAAGTATTTTTCCAAACGTCCAAAGGATGTCTGCACTTGAGGGTCTaGTTGTTCTCATGGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGKQGDFHEVFFQTSKGCLHLRV*LFSWYF Trigger: GAAATACCATGAGAACAACAAGACCCTCAAGTGCAG...ACATCCTTTGGACGTTTGGAAAAATACTTCATGAAAGTCACCTTGTTTGCCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | TACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCAAGGATCCTCTATCTGTaGTCGTTCATCCCATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YRHCLIQSQGPFHEIKLSRILYL*SFIPFP Trigger: AGGAAATGGGATGAACGACAACAGATAGAGGATCCT...TGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | AGTATTTACTTTGGGCATGTTACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTTGTTAGAAGGAAATaGTCAAAGATGCTGCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SIYFGHVTGIASFSPKGHFVRRK*SKMLPD Trigger: ATCAGGCAGCATCTTTGACAATTTCCTTCTAACAAA...ATGGCCCTTGGGACTGAATGAGGCAATGCCTGTAACATGCCCAAAGTAAATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | TACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCAAAGGTCTCATTCTCATaGCTGAATGGCTTAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: YRHCLIQSQGPFHEIKLSKVSFS*LNGLNL Trigger: CAGGTTTAAGCCATTCAGCAATGAGAATGAGACCTT...TGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS-3UTR CAA 90 bp | CTAAAAAGAATGAGTCGTTTTACTTCCCATAATTTGCTAAGCGAGGGCCCATTTCACTTGAGGGTCTTGTaGTTCTCATGGTATTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LKRMSRFTSHNLLSEGPFHLRVL*FSWYFP Trigger: AGGGAAATACCATGAGAACAACAAGACCCTCAAGTG...AAATGGGCCCTCGCTTAGCAAATTATGGGAAGTAAAACGACTCATTCTTTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | CTAAAAAGAATGAGTCGTTTTACTTCCCATAATTTGCTAAGCGAGGGCCCATTTCTGCACTTGAGGGTCTaGTTGTTCTCATGGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKRMSRFTSHNLLSEGPFLHLRV*LFSWYF Trigger: GAAATACCATGAGAACAACAAGACCCTCAAGTGCAG...AAATGGGCCCTCGCTTAGCAAATTATGGGAAGTAAAACGACTCATTCTTTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | TACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCAATCTCTCTCTTTATCTaGATAAAATTTTCCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YRHCLIQSQGPFHEIKLSISLFI*IKFSRG Trigger: GCCTCGGGAAAATTTTATCAAGATAAAGAGAGAGAT...TGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS-3UTR CAA 90 bp | AGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATTCTTTGTTAGAAGGAAATaGTCAAAGATGCTGCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RHCLIQSQGPFHEIKLSFFVRRK*SKMLPD Trigger: ATCAGGCAGCATCTTTGACAATTTCCTTCTAACAAA...GAATGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | TACAGGCATTGCCTCATTCAGTCCCAAGGGCCATTTCATGAGATAAAATTATCATTTGTTAGAAGGAAATaGTCAAAGATGCTGCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: YRHCLIQSQGPFHEIKLSFVRRK*SKMLPD Trigger: ATCAGGCAGCATCTTTGACAATTTCCTTCTAACAAA...TGATAATTTTATCTCATGAAATGGCCCTTGGGACTGAATGAGGCAATGCCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS-3UTR CAA 90 bp | CAGGCAAACAAGGTGACTTTCATGAAGTATTTTTCCAAACGTCCAAAGGATGTTTTTGTTAGAAGGAAATaGTCAAAGATGCTGCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QANKVTFMKYFSKRPKDVFVRRK*SKMLPD Trigger: ATCAGGCAGCATCTTTGACAATTTCCTTCTAACAAA...AACATCCTTTGGACGTTTGGAAAAATACTTCATGAAAGTCACCTTGTTTGCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106631.9 |
||
| CDS GCA 72 bp | TTCTGGTCCAGAGACGCCCTCGCTGCACTGCCTTCCTaGTTGAGCCTTTCCTCTGCTTCCTCCTCGTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FWSRDALAALPS*LSLSSASSSSS Trigger: GGACGACGAGGAGGAAGCAGAGGAAAGGCTCAAGCAGGAAGGCAGTGCAGCGAGGGCGTCTCTGGACCAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS GCA 72 bp | CAAGTGGGCTTCCTTCTGGTCCAGAGACGCCCTCGCTaGACTGCCTTCCTGCTTGAGCCTTTCCTCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QVGFLLVQRRPR*TAFLLEPFLCF Trigger: GAAGCAGAGGAAAGGCTCAAGCAGGAAGGCAGTGCAGCGAGGGCGTCTCTGGACCAGAAGGAAGCCCACTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS CAA 90 bp | CCTTCCCACACTCCATCCATCGCCTCATTCCAGTCATCTGGCTTCTaGGCATCCGGGTCTGGGATGAATTCAGAGTCCTCCCAGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PSHTPSIASFQSSGF*ASGSGMNSESSQSS Trigger: TGAGGACTGGGAGGACTCTGAATTCATCCCAGACCCGGATGCCAAGAAGCCAGATGACTGGAATGAGGCGATGGATGGAGTGTGGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS CAA 72 bp | ACTCCATCCATCGCCTCATTCCAGTCATCTGGCTTCTaGGCATCCGGGTCTGGGATGAATTCAGAGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TPSIASFQSSGF*ASGSGMNSESS Trigger: GGAGGACTCTGAATTCATCCCAGACCCGGATGCCAAGAAGCCAGATGACTGGAATGAGGCGATGGATGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS CCA 72 bp | CTCATTCCAGTCATCTGGCTTCTTGGCATCCGGGTCTaGGATGAATTCAGAGTCCTCCCAGTCCTCAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LIPVIWLLGIRV*DEFRVLPVLRF Trigger: AAACCTGAGGACTGGGAGGACTCTGAATTCATCCCAGACCCGGATGCCAAGAAGCCAGATGACTGGAATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS CCA 72 bp | TGTGATAGTGACCAATGGTGGGGTCAGGCCTGTATTTaGGGTTGTCTATCTCTGGGTGAATCCACTCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CDSDQWWGQACI*GCLSLGESTRP Trigger: AGGGCGAGTGGATTCACCCAGAGATAGACAACCCCAAATACAGGCCTGACCCCACCATTGGTCACTATCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS TCA 72 bp | TCCAGTCATCTGGCTTCTTGGCATCCGGGTCTGGGATaGATTCAGAGTCCTCCCAGTCCTCAGGTTTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: SSHLASWHPGLG*IQSPPSPQVSY Trigger: ATAAGAAACCTGAGGACTGGGAGGACTCTGAATTCATCCCAGACCCGGATGCCAAGAAGCCAGATGACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS TCA 72 bp | GCCACCGCCGCAATCGATGCCTTGCTCGTGTTTTACTaGAAACTGAACCACCAAGGTCTCATTCTCATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ATAAIDALLVFY*KLNHQGLILIA Trigger: AGCAATGAGAATGAGACCTTGGTGGTTCAGTTTTCAGTAAAACACGAGCAAGGCATCGATTGCGGCGGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS TCA 72 bp | TGTTGTTGCCAAAGCCACAGATGTCCGGGCCGAACATaGTGTAATACTGGGATTCTGAGTGCATGTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CCCQSHRCPGRT*CNTGILSACPP Trigger: AGGAGGACATGCACTCAGAATCCCAGTATTACATCATGTTCGGCCCGGACATCTGTGGCTTTGGCAACAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS GCA 72 bp | CAGGAAAGAGTTTCACGTAGCCACCGCCGCAATCGATaGCTTGCTCGTGTTTTACTGAAAACTGAACCACCA | + |
|
Preference number: 6 (lower is better) Translates to: QERVSRSHRRNR*LARVLLKTEPP Trigger: TGGTGGTTCAGTTTTCAGTAAAACACGAGCAAGGCATCGATTGCGGCGGTGGCTACGTGAAACTCTTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS CAA 72 bp | TTGTCAATGATCCGAGGTTTCCATTCTCCCATGTACTaGACGTTTGGTATCAAGGGCCCTTCCCACACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSMIRGFHSPMY*TFGIKGPSHTP Trigger: TGGAGTGTGGGAAGGGCCCTTGATACCAAACGTCAAGTACATGGGAGAATGGAAACCTCGGATCATTGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS TCA 72 bp | CCGCAATCGATGCCTTGCTCGTGTTTTACTGAAAACTaGACCACCAAGGTCTCATTCTCATTGCTGAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: PQSMPCSCFTEN*TTKVSFSLLNG Trigger: GCCATTCAGCAATGAGAATGAGACCTTGGTGGTTCAGTTTTCAGTAAAACACGAGCAAGGCATCGATTGCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS CCA 72 bp | AAACTGAACCACCAAGGTCTCATTCTCATTGCTGAATaGCTTAAACCTGGTGGAAAGGGCGTAGAACTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KLNHQGLILIAE*LKPGGKGVELG Trigger: GCCAAGTTCTACGCCCTTTCCACCAGGTTTAAGCCATTCAGCAATGAGAATGAGACCTTGGTGGTTCAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS GCA 72 bp | TTCTGTTTCTCCATTTCCTCATACAGCTCTCTCCACTaGTGCTCCACATCCTTTCTTAATCCCCAGGTCATA | + |
|
Preference number: 6 (lower is better) Translates to: FCFSISSYSSLH*CSTSFLNPQVI Trigger: TATGACCTGGGGATTAAGAAAGGATGTGGAGCAGCAGTGGAGAGAGCTGTATGAGGAAATGGAGAAACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||
| CDS CCA 72 bp | ACCTGGTGGAAAGGGCGTAGAACTTGGCATCTTCTGTaGTCTGGAGACCTTTATCTCTCTCTTTATCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: TWWKGRRTWHLL*SGDLYLSLYLD Trigger: ATCAAGATAAAGAGAGAGATAAAGGTCTCCAGACCACAGAAGATGCCAAGTTCTACGCCCTTTCCACCAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030285.8 |
||
| CDS GCA 72 bp | TGTTTCTCCATTTCCTCATACAGCTCTCTCCACTGCTaGTCCACATCCTTTCTTAATCCCCAGGTCATATTT | + |
|
Preference number: 6 (lower is better) Translates to: CFSISSYSSLHC*STSFLNPQVIF Trigger: AAATATGACCTGGGGATTAAGAAAGGATGTGGAGCAGCAGTGGAGAGAGCTGTATGAGGAAATGGAGAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030285.8 ENSMUST00000106628.8 ENSMUST00000106629.8 ENSMUST00000106631.9 |
||