Pregenerated sensors for CALR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019732Ensembl transcript IDs: ENSMUST00000019876.12, ENSMUST00000109974.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGTGTCTCACTATGTGTCCCAGGCTGTCCTAGAACTCACTACATaGACCAGGCTGATGTGGAAATCCCAGATCTGTCTGCTTCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: TVSHYVSQAVLELTT*TRLMWKSQICLLLP Trigger: AGGCAGAAGCAGACAGATCTGGGATTTCCACATCAGCCTGGTCCATGTAGTGAGTTCTAGGACAGCCTGGGACACATAGTGAGACACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGGCTGTCCTAGAACTCACTACATGGACCAGGCTGATGTGGAAATCCCAGGAGATTAAAGGAGTGTaGCACCACATGCCGTCAACA | + |
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Preference number: 2 (lower is better) Translates to: SQAVLELTTWTRLMWKSQEIKGV*HHMPST Trigger: TGTTGACGGCATGTGGTGGCACACTCCTTTAATCTC...CTGGGATTTCCACATCAGCCTGGTCCATGTAGTGAGTTCTAGGACAGCCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAATTTAAACAGTGTCTCACTATGTGTCCCAGGCTGTCCTAGAACTCACTACTCAACAGAAACTTATTaGAGACCCTGGGGTCATAGG | + |
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Preference number: 2 (lower is better) Translates to: KNLNSVSLCVPGCPRTHYSTETY*RPWGHR Trigger: CCTATGACCCCAGGGTCTGCAATAAGTTTCTGTTGA...GTAGTGAGTTCTAGGACAGCCTGGGACACATAGTGAGACACTGTTTAAATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| 3UTR CCA 72 bp | GCTGTCCTAGAACTCACTACATGGACCAGGCTGATGTaGAAATCCCAGATCTGTCTGCTTCTGCCTCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: AVLELTTWTRLM*KSQICLLLPLK Trigger: CTTGAGAGGCAGAAGCAGACAGATCTGGGATTTCCACATCAGCCTGGTCCATGTAGTGAGTTCTAGGACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| 3UTR CCA 72 bp | CACTATGTGTCCCAGGCTGTCCTAGAACTCACTACATaGACCAGGCTGATGTGGAAATCCCAGATCTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: HYVSQAVLELTT*TRLMWKSQICL Trigger: CAGACAGATCTGGGATTTCCACATCAGCCTGGTCCATGTAGTGAGTTCTAGGACAGCCTGGGACACATAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| 3UTR GCA 72 bp | TGCTTCTGCCTCTCAAGTCCTGAGATTAAAGGAGTGTaGCACCACATGCCGTCAACAGAAACTTATTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: CFCLSSPEIKGV*HHMPSTETYCR Trigger: TCTGCAATAAGTTTCTGTTGACGGCATGTGGTGGCACACTCCTTTAATCTCAGGACTTGAGAGGCAGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| 3UTR-3UTR CAA 90 bp | AATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCAACACAAACAGGGGATaGTTTTTCAGAAACTGGACA | + |
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Preference number: 3 (lower is better) Translates to: NPRSVCFCLSSPEIKGVCNTNRG*FFRNWT Trigger: TGTCCAGTTTCTGAAAAACAATCCCCTGTTTGTGTT...GCACACTCCTTTAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR GCA 90 bp | CTATGTGTCCCAGGCTGTCCTAGAACTCACTACATGGACCAGGCTGATGTGGAAGAGTCATTGGTGGACTaGACCCAGCGGTTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LCVPGCPRTHYMDQADVEESLVD*TQRFLQ Trigger: CTGGAGGAACCGCTGGGTGCAGTCCACCAATGACTC...TTCCACATCAGCCTGGTCCATGTAGTGAGTTCTAGGACAGCCTGGGACACATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS-3UTR CCA 90 bp | CCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCCACGCCATCCTCATATGGTaGCTTCTGCAGCCAGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: PRSVCFCLSSPEIKGVCHAILIW*LLQPVP Trigger: GGGGACTGGCTGCAGAAGCCACCATATGAGGATGGC...GTGGCACACTCCTTTAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CCA 90 bp | ACATGGACCAGGCTGATGTGGAAATCCCAGATCTGTCTGCTTCTGCCTCTCAAGGGTCTCATCTTCTGGTaGAGCCACACGTCCTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: TWTRLMWKSQICLLLPLKGLIFW*SHTSLS Trigger: CGACAAGGACGTGTGGCTCCACCAGAAGATGAGACC...CTTGAGAGGCAGAAGCAGACAGATCTGGGATTTCCACATCAGCCTGGTCCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR GCA 90 bp | TCCCAGGCTGTCCTAGAACTCACTACATGGACCAGGCTGATGTGGAAATCCCAGCCACAGTCCATCTTCTaGTCATGCTTCACCGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: SQAVLELTTWTRLMWKSQPQSIF*SCFTVY Trigger: GTACACGGTGAAGCATGAGCAGAAGATGGACTGTGG...CTGGGATTTCCACATCAGCCTGGTCCATGTAGTGAGTTCTAGGACAGCCTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS-3UTR CCA 90 bp | AATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCGCCATCCTCATATGGTaGCTTCTGCAGCCAGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: NPRSVCFCLSSPEIKGVCAILIW*LLQPVP Trigger: GGGGACTGGCTGCAGAAGCCACCATATGAGGATGGC...GCACACTCCTTTAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CCA 90 bp | ATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCCGGTCTCATCTTCTGGTaGAGCCACACGTCCTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: IPDLSASASQVLRLKECAGLIFW*SHTSLS Trigger: CGACAAGGACGTGTGGCTCCACCAGAAGATGAGACC...GGCACACTCCTTTAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CCA 90 bp | TCCCAGGCTGTCCTAGAACTCACTACATGGACCAGGCTGATGTGGAAATCCCAGAGTTCGCCCTGCCTGTaGAATCTGCTGAAATGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SQAVLELTTWTRLMWKSQSSPCL*NLLKWL Trigger: CAACCATTTCAGCAGATTCCACAGGCAGGGCGAACT...CTGGGATTTCCACATCAGCCTGGTCCATGTAGTGAGTTCTAGGACAGCCTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CCA 90 bp | GACCAGGCTGATGTGGAAATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGTTCGCCCTGCCTGTaGAATCTGCTGAAATGGTTG | + |
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Preference number: 4 (lower is better) Translates to: DQADVEIPDLSASASQVLSSPCL*NLLKWL Trigger: CAACCATTTCAGCAGATTCCACAGGCAGGGCGAACT...CAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGATTTCCACATCAGCCTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR TCA 90 bp | CCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCCACCAGACGGAAACACCTTaGTGTAACCACCACCACAGT | + |
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Preference number: 4 (lower is better) Translates to: PRSVCFCLSSPEIKGVCHQTETP*CNHHHS Trigger: ACTGTGGTGGTGGTTACATCAAGGTGTTTCCGTCTG...GTGGCACACTCCTTTAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS-3UTR TCA 90 bp | CCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCCACGCCTGTGGAATCTGCTaGAATGGTTGTGCCTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: PRSVCFCLSSPEIKGVCHACGIC*NGCACE Trigger: TTCACAGGCACAACCATTTCAGCAGATTCCACAGGC...GTGGCACACTCCTTTAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR GCA 90 bp | TGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCCACCACATGCCGTCAACAGAACCCGCATCCAGAAAGTaGTTTTCCCAATCCTGGACT | + |
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Preference number: 4 (lower is better) Translates to: CLSSPEIKGVCHHMPSTEPASRK*FSQSWT Trigger: AGTCCAGGATTGGGAAAAGCACTTTCTGGATGCGGG...TTCTGTTGACGGCATGTGGTGGCACACTCCTTTAATCTCAGGACTTGAGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CCA 90 bp | ACATGGACCAGGCTGATGTGGAAATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTGCTTTTCCCAATCCTaGACTTTACTGCCTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: TWTRLMWKSQICLLLPLKCFSQS*TLLPST Trigger: GGTGGAAGGCAGTAAAGTCCAGGATTGGGAAAAGCA...CTTGAGAGGCAGAAGCAGACAGATCTGGGATTTCCACATCAGCCTGGTCCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CCA 90 bp | GACCAGGCTGATGTGGAAATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGATCCATCTCCTTTTCTaGACCCTTAGTTTCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: DQADVEIPDLSASASQVLIHLLF*TLSFSP Trigger: TGGGGAGAAACTAAGGGTCCAGAAAAGGAGATGGAT...CAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGATTTCCACATCAGCCTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CCA 90 bp | ACATGGACCAGGCTGATGTGGAAATCCCAGATCTGTCTGCTTCTGCCTCTCAAGCTTCCTTGGCCTGTATaGCATCCATCTCCTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TWTRLMWKSQICLLLPLKLPWPV*HPSPFL Trigger: CAGAAAAGGAGATGGATGCCATACAGGCCAAGGAAG...CTTGAGAGGCAGAAGCAGACAGATCTGGGATTTCCACATCAGCCTGGTCCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR TCA 90 bp | TGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCCACCACATGCCGTCAACAGAAAAATGGTTGTGCCTGTaGAACTTCCCCATCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: CLSSPEIKGVCHHMPSTEKWLCL*NFPISR Trigger: TCTGCTGATGGGGAAGTTTCACAGGCACAACCATTT...TTCTGTTGACGGCATGTGGTGGCACACTCCTTTAATCTCAGGACTTGAGAGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR TCA 90 bp | ATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCCAAATGGTTGTGCCTGTaGAACTTCCCCATCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: IPDLSASASQVLRLKECAKWLCL*NFPISR Trigger: TCTGCTGATGGGGAAGTTTCACAGGCACAACCATTT...GGCACACTCCTTTAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR TCA 90 bp | GCTGATGTGGAAATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAGCCTGTGGAATCTGCTaGAATGGTTGTGCCTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: ADVEIPDLSASASQVLRLACGIC*NGCACE Trigger: TTCACAGGCACAACCATTTCAGCAGATTCCACAGGC...TAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGATTTCCACATCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR GCA 90 bp | GCTGATGTGGAAATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTACTCCCCAGGTGGCCTTaGCAAACTTCTCTGCATATT | + |
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Preference number: 4 (lower is better) Translates to: ADVEIPDLSASASQVLRLLPRWP*QTSLHI Trigger: AATATGCAGAGAAGTTTGGCAAGGCCACCTGGGGAG...TAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGATTTCCACATCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR TCA 90 bp | CCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCCACCATCCACCTTGCATCTaGTTGGCTTCTTGTTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: PRSVCFCLSSPEIKGVCHHPPCI*LASCFH Trigger: ATGAAAACAAGAAGCCAATCAGATGCAAGGTGGATG...GTGGCACACTCCTTTAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CCA 90 bp | AAAAATTTAAACAGTGTCTCACTATGTGTCCCAGGCTGTCCTAGAACTCACTACACTGGGAGTCATTGGTaGACTGCACCCAGCGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: KNLNSVSLCVPGCPRTHYTGSHW*TAPSGS Trigger: GGAACCGCTGGGTGCAGTCCACCAATGACTCCCAGT...GTAGTGAGTTCTAGGACAGCCTGGGACACATAGTGAGACACTGTTTAAATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS-3UTR CCA 90 bp | ATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCCACAGCTCTAGACCAATaGCGCCAATGTTCTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: IPDLSASASQVLRLKECATALDQ*RQCSQT Trigger: AGTTTGAGAACATTGGCGCCATTGGTCTAGAGCTGT...GGCACACTCCTTTAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CCA 90 bp | AATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCCTTCCTTGGCCTGTATaGCATCCATCTCCTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: NPRSVCFCLSSPEIKGVCLPWPV*HPSPFL Trigger: CAGAAAAGGAGATGGATGCCATACAGGCCAAGGAAG...GCACACTCCTTTAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CCA 90 bp | GCTGATGTGGAAATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAACAGCTCTAGACCAATaGCGCCAATGTTCTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: ADVEIPDLSASASQVLRLTALDQ*RQCSQT Trigger: AGTTTGAGAACATTGGCGCCATTGGTCTAGAGCTGT...TAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGATTTCCACATCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CCA 90 bp | ATTAAAGGAGTGTGCCACCACATGCCGTCAACAGAAACTTATTGCAGACCCTGGATCCATCTCCTTTTCTaGACCCTTAGTTTCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: IKGVCHHMPSTETYCRPWIHLLF*TLSFSP Trigger: TGGGGAGAAACTAAGGGTCCAGAAAAGGAGATGGAT...CCAGGGTCTGCAATAAGTTTCTGTTGACGGCATGTGGTGGCACACTCCTTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR TCA 90 bp | CCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCCACTATCAGGTCCAAACATaGTGTAGTACTGAGATTTTC | + |
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Preference number: 4 (lower is better) Translates to: PRSVCFCLSSPEIKGVCHYQVQT*CSTEIF Trigger: GAAAATCTCAGTACTACATCATGTTTGGACCTGATA...GTGGCACACTCCTTTAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS-3UTR CCA 90 bp | AGTCCTGAGATTAAAGGAGTGTGCCACCACATGCCGTCAACAGAAACTTATTGCTCTAGAAACTCCTCCTaGAAGTACACAGTGGCTAGT | + |
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Preference number: 4 (lower is better) Translates to: SPEIKGVCHHMPSTETYCSRNSS*KYTVAS Trigger: ACTAGCCACTGTGTACTTCCAGGAGGAGTTTCTAGA...GCAATAAGTTTCTGTTGACGGCATGTGGTGGCACACTCCTTTAATCTCAGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS-3UTR CCA 90 bp | GGATTGTTTTTCAGAAACTGGACAAATGACCATGTAGATGTGATCATTCAAATGCAAACTGGGAGTCATTaGTGGACTGCACCCAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: GLFFRNWTNDHVDVIIQMQTGSH*WTAPSG Trigger: ACCGCTGGGTGCAGTCCACCAATGACTCCCAGTTTG...CATTTGAATGATCACATCTACATGGTCATTTGTCCAGTTTCTGAAAAACAATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS-3UTR CCA 90 bp | CATGTAGATGTGATCATTCAAATGTGTATTATTAGAGTTGCAGCTGGGCCACTCCCCTTTGTTGCTGAATaGCTTGAAGCTCGCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: HVDVIIQMCIIRVAAGPLPFVAE*LEARRD Trigger: ATCTCTGCGAGCTTCAAGCCATTCAGCAACAAAGGG...GAGTGGCCCAGCTGCAACTCTAATAATACACATTTGAATGATCACATCTACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS-3UTR GCA 90 bp | CATGTAGATGTGATCATTCAAATGTGTATTATTAGAGTTGCAGCTGGGCCACTCTCCATCTTCTGCTCATaGTTCACCGTGTACTGGATT | + |
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Preference number: 4 (lower is better) Translates to: HVDVIIQMCIIRVAAGPLSIFCS*FTVYWI Trigger: AATCCAGTACACGGTGAAGCATGAGCAGAAGATGGA...GAGTGGCCCAGCTGCAACTCTAATAATACACATTTGAATGATCACATCTACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS-3UTR CCA 90 bp | AGGGGATTGTTTTTCAGAAACTGGACAAATGACCATGTAGATGTGATCATTCAATTTTCACTTCTTCCTTaGCCTGTATGGCATCCATCT | + |
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Preference number: 4 (lower is better) Translates to: RGLFFRNWTNDHVDVIIQFSLLP*PVWHPS Trigger: AGATGGATGCCATACAGGCCAAGGAAGAAGTGAAAA...TTGAATGATCACATCTACATGGTCATTTGTCCAGTTTCTGAAAAACAATCCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CCA 90 bp | GGATTGTTTTTCAGAAACTGGACAAATGACCATGTAGATGTGATCATTCAAATGTTTTCACTTCTTCCTTaGCCTGTATGGCATCCATCT | + |
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Preference number: 4 (lower is better) Translates to: GLFFRNWTNDHVDVIIQMFSLLP*PVWHPS Trigger: AGATGGATGCCATACAGGCCAAGGAAGAAGTGAAAA...CATTTGAATGATCACATCTACATGGTCATTTGTCCAGTTTCTGAAAAACAATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS CCA 90 bp | TGCACCCAGCGGTTCCTCCAGCGCTCTCCGTCTAGAAACTCCTCCTaGAAGTACACAGTGGCTAGTGCCACGCGCAGCACACAGATGGCC | + |
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Preference number: 5 (lower is better) Translates to: CTQRFLQRSPSRNSS*KYTVASATRSTQMA Trigger: GGCCATCTGTGTGCTGCGCGTGGCACTAGCCACTGTGTACTTCCAGGAGGAGTTTCTAGACGGAGAGCGCTGGAGGAACCGCTGGGTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS GCA 90 bp | CCCGATGAGACTCTGAAGTGCCCAAACTGGGAGTCATTGGTGGACTaGACCCAGCGGTTCCTCCAGCGCTCTCCGTCTAGAAACTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: PDETLKCPNWESLVD*TQRFLQRSPSRNSS Trigger: GGAGGAGTTTCTAGACGGAGAGCGCTGGAGGAACCGCTGGGTGCAGTCCACCAATGACTCCCAGTTTGGGCACTTCAGAGTCTCATCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS CCA 90 bp | TCCTCCAGCGCTCTCCGTCTAGAAACTCCTCCTGGAAGTACACAGTaGCTAGTGCCACGCGCAGCACACAGATGGCCCAGAGCAATGCAC | + |
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Preference number: 5 (lower is better) Translates to: SSSALRLETPPGSTQ*LVPRAAHRWPRAMH Trigger: GTGCATTGCTCTGGGCCATCTGTGTGCTGCGCGTGGCACTAGCCACTGTGTACTTCCAGGAGGAGTTTCTAGACGGAGAGCGCTGGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS GCA 90 bp | AGCCAGCAGGTCTCATCTTCTGGTGGAGCCACACGTCCTTGTCGATaGCCTCAGCTTTCAGGCCATCCTCATATGGTGGCTTCTGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: SQQVSSSGGATRPCR*PQLSGHPHMVASAA Trigger: GGCTGCAGAAGCCACCATATGAGGATGGCCTGAAAGCTGAGGGCATCGACAAGGACGTGTGGCTCCACCAGAAGATGAGACCTGCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS CCA 90 bp | CCACACGTCCTTGTCGATGCCCTCAGCTTTCAGGCCATCCTCATATaGTGGCTTCTGCAGCCAGTCCCCATCCAGCTCACTGTTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: PHVLVDALSFQAILI*WLLQPVPIQLTVPV Trigger: GACTGGAACAGTGAGCTGGATGGGGACTGGCTGCAGAAGCCACCATATGAGGATGGCCTGAAAGCTGAGGGCATCGACAAGGACGTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS GCA 90 bp | TCTGCAGCCAGTCCCCATCCAGCTCACTGTTCCAGTCACTCGGCTTaGTGGCACCCGCATCCAGAAAGTGCTTTTCCCAATCCTGGACTT | + |
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Preference number: 5 (lower is better) Translates to: SAASPHPAHCSSHSA*WHPHPESAFPNPGL Trigger: AAGTCCAGGATTGGGAAAAGCACTTTCTGGATGCGGGTGCCAGCAAGCCGAGTGACTGGAACAGTGAGCTGGATGGGGACTGGCTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS GCA 90 bp | TTGTCGATGCCCTCAGCTTTCAGGCCATCCTCATATGGTGGCTTCTaGAGCCAGTCCCCATCCAGCTCACTGTTCCAGTCACTCGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LSMPSAFRPSSYGGF*SQSPSSSLFQSLGL Trigger: CAAGCCGAGTGACTGGAACAGTGAGCTGGATGGGGACTGGCTGCAGAAGCCACCATATGAGGATGGCCTGAAAGCTGAGGGCATCGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS CCA 90 bp | GCAGCCAGTCCCCATCCAGCTCACTGTTCCAGTCACTCGGCTTGCTaGCACCCGCATCCAGAAAGTGCTTTTCCCAATCCTGGACTTTAC | + |
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Preference number: 5 (lower is better) Translates to: AASPHPAHCSSHSAC*HPHPESAFPNPGLY Trigger: GTAAAGTCCAGGATTGGGAAAAGCACTTTCTGGATGCGGGTGCCAGCAAGCCGAGTGACTGGAACAGTGAGCTGGATGGGGACTGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS CCA 90 bp | CACGTCCTTGTCGATGCCCTCAGCTTTCAGGCCATCCTCATATGGTaGCTTCTGCAGCCAGTCCCCATCCAGCTCACTGTTCCAGTCACT | + |
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Preference number: 5 (lower is better) Translates to: HVLVDALSFQAILIW*LLQPVPIQLTVPVT Trigger: AGTGACTGGAACAGTGAGCTGGATGGGGACTGGCTGCAGAAGCCACCATATGAGGATGGCCTGAAAGCTGAGGGCATCGACAAGGACGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGGCTGTCCTAGAACTCACTACATGGACCAGGCTGATGTGGAAATCCCAGCCAAACTGGGAGTCATaGGTGGACTGCACCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SQAVLELTTWTRLMWKSQPNWES*VDCTQR Trigger: CCGCTGGGTGCAGTCCACCAATGACTCCCAGTTTGG...CTGGGATTTCCACATCAGCCTGGTCCATGTAGTGAGTTCTAGGACAGCCTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS-3UTR CAA 90 bp | TCCCAGGCTGTCCTAGAACTCACTACATGGACCAGGCTGATGTGGAAATCCCAGTTCCAGTCACTCGGCTaGCTGGCACCCGCATCCAGA | + |
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Preference number: 5 (lower is better) Translates to: SQAVLELTTWTRLMWKSQFQSLG*LAPASR Trigger: TCTGGATGCGGGTGCCAGCAAGCCGAGTGACTGGAA...CTGGGATTTCCACATCAGCCTGGTCCATGTAGTGAGTTCTAGGACAGCCTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CAA 90 bp | CTCTCAAGTCCTGAGATTAAAGGAGTGTGCCACCACATGCCGTCAACAGAAACTTTCCAGTCACTCGGCTaGCTGGCACCCGCATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSSPEIKGVCHHMPSTETFQSLG*LAPASR Trigger: TCTGGATGCGGGTGCCAGCAAGCCGAGTGACTGGAA...AGTTTCTGTTGACGGCATGTGGTGGCACACTCCTTTAATCTCAGGACTTGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CAA 90 bp | GACCAGGCTGATGTGGAAATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGTCTCCCCAGGTGGCCTaGCCAAACTTCTCTGCATAT | + |
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Preference number: 5 (lower is better) Translates to: DQADVEIPDLSASASQVLSPQVA*PNFSAY Trigger: ATATGCAGAGAAGTTTGGCAAGGCCACCTGGGGAGA...CAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGATTTCCACATCAGCCTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS TCA 90 bp | TATAGTTCGCCCTGCCTGTGGAATCTGCTGAAATGGTTGTGCCTGTaGAACTTCCCCATCAGCAGATCCTCCTCATCTTCTTCACGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YSSPCLWNLLKWLCL*NFPISRSSSSSSRA Trigger: GGCCCGTGAAGAAGATGAGGAGGATCTGCTGATGGGGAAGTTTCACAGGCACAACCATTTCAGCAGATTCCACAGGCAGGGCGAACTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CAA 90 bp | GACCAGGCTGATGTGGAAATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGGTGAAGCCATCCACCTaGCATCTGATTGGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DQADVEIPDLSASASQVLVKPST*HLIGFL Trigger: CAAGAAGCCAATCAGATGCAAGGTGGATGGCTTCAC...CAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGATTTCCACATCAGCCTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS TCA 90 bp | CTTTGTCTTTCTCTTTATGCCCATAGAACTTCCCCGATGAGACTCTaGAGTGCCCAAACTGGGAGTCATTGGTGGACTGCACCCAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LCLSLYAHRTSPMRL*SAQTGSHWWTAPSG Trigger: ACCGCTGGGTGCAGTCCACCAATGACTCCCAGTTTGGGCACTTCAGAGTCTCATCGGGGAAGTTCTATGGGCATAAAGAGAAAGACAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS TCA 90 bp | CTGCAGGCCTTTGTCTTTCTCTTTATGCCCATAGAACTTCCCCGATaGGACTCTGAAGTGCCCAAACTGGGAGTCATTGGTGGACTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LQAFVFLFMPIELPR*DSEVPKLGVIGGLH Trigger: GTGCAGTCCACCAATGACTCCCAGTTTGGGCACTTCAGAGTCTCATCGGGGAAGTTCTATGGGCATAAAGAGAAAGACAAAGGCCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS-3UTR CAA 90 bp | CCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCCACTTGTTGCTGAATGGCTaGAAGCTCGCAGAGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PRSVCFCLSSPEIKGVCHLLLNG*KLAEMA Trigger: TGCCATCTCTGCGAGCTTCAAGCCATTCAGCAACAA...GTGGCACACTCCTTTAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS TCA 90 bp | CTGGACTTTACTGCCTTCCACCTGATCCCAGTCCCTAGAGTCCAGTaGTGTCTTTTCCGTTTTCCTCAGCGATGTCAGGTTCCAGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: LDFTAFHLIPVPRVQ*CLFRFPQRCQVPVI Trigger: TATGACTGGAACCTGACATCGCTGAGGAAAACGGAAAAGACATCACTGGACTCTAGGGACTGGGATCAGGTGGAAGGCAGTAAAGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CAA 90 bp | CTATGTGTCCCAGGCTGTCCTAGAACTCACTACATGGACCAGGCTGATGTGGAAGTAGTCTGCAGGCCTTaGTCTTTCTCTTTATGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LCVPGCPRTHYMDQADVEVVCRP*SFSLCP Trigger: TGGGCATAAAGAGAAAGACAAAGGCCTGCAGACTAC...TTCCACATCAGCCTGGTCCATGTAGTGAGTTCTAGGACAGCCTGGGACACATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS-3UTR CAA 90 bp | ATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCCAGGGTCTTCCCTTTGTaGCTGAATGGCTTGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IPDLSASASQVLRLKECARVFPL*LNGLKL Trigger: GAGCTTCAAGCCATTCAGCAACAAAGGGAAGACCCT...GGCACACTCCTTTAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS-3UTR CAA 90 bp | AATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTAAAGGAGTGTGCTCTCCCCAGGTGGCCTaGCCAAACTTCTCTGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: NPRSVCFCLSSPEIKGVCSPQVA*PNFSAY Trigger: ATATGCAGAGAAGTTTGGCAAGGCCACCTGGGGAGA...GCACACTCCTTTAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGGCTGTCCTAGAACTCACTACATGGACCAGGCTGATGTGGAAATCCCAGTTTTTCACTTCTTCCTaGGCCTGTATGGCATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SQAVLELTTWTRLMWKSQFFTSS*ACMASI Trigger: GATGGATGCCATACAGGCCAAGGAAGAAGTGAAAAA...CTGGGATTTCCACATCAGCCTGGTCCATGTAGTGAGTTCTAGGACAGCCTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS CCA 90 bp | TCAGCGATGTCAGGTTCCAGTCATACTCAATGCTGCCAGACTCAATaGACTGGCCATCGACTTTTACCTCGTAAGAAAGATCTGGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SAMSGSSHTQCCQTQ*TGHRLLPRKKDLVL Trigger: TAAGACCAGATCTTTCTTACGAGGTAAAAGTCGATGGCCAGTCCATTGAGTCTGGCAGCATTGAGTATGACTGGAACCTGACATCGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS-3UTR CAA 90 bp | GCTGATGTGGAAATCCCAGATCTGTCTGCTTCTGCCTCTCAAGTCCTGAGATTATTTTTCACTTCTTCCTaGGCCTGTATGGCATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: ADVEIPDLSASASQVLRLFFTSS*ACMASI Trigger: GATGGATGCCATACAGGCCAAGGAAGAAGTGAAAAA...TAATCTCAGGACTTGAGAGGCAGAAGCAGACAGATCTGGGATTTCCACATCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS GCA 72 bp | ACTCTGAAGTGCCCAAACTGGGAGTCATTGGTGGACTaGACCCAGCGGTTCCTCCAGCGCTCTCCGTCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: TLKCPNWESLVD*TQRFLQRSPSR Trigger: TCTAGACGGAGAGCGCTGGAGGAACCGCTGGGTGCAGTCCACCAATGACTCCCAGTTTGGGCACTTCAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS CCA 72 bp | GCTCTCCGTCTAGAAACTCCTCCTGGAAGTACACAGTaGCTAGTGCCACGCGCAGCACACAGATGGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ALRLETPPGSTQ*LVPRAAHRWPR Trigger: TCTGGGCCATCTGTGTGCTGCGCGTGGCACTAGCCACTGTGTACTTCCAGGAGGAGTTTCTAGACGGAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS CAA 90 bp | TTCTGCAGCCAGTCCCCATCCAGCTCACTGTTCCAGTCACTCGGCTaGCTGGCACCCGCATCCAGAAAGTGCTTTTCCCAATCCTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: FCSQSPSSSLFQSLG*LAPASRKCFSQSWT Trigger: AGTCCAGGATTGGGAAAAGCACTTTCTGGATGCGGGTGCCAGCAAGCCGAGTGACTGGAACAGTGAGCTGGATGGGGACTGGCTGCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS GCA 72 bp | CCCTCAGCTTTCAGGCCATCCTCATATGGTGGCTTCTaGAGCCAGTCCCCATCCAGCTCACTGTTCCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PSAFRPSSYGGF*SQSPSSSLFQS Trigger: TGACTGGAACAGTGAGCTGGATGGGGACTGGCTGCAGAAGCCACCATATGAGGATGGCCTGAAAGCTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS CCA 72 bp | GTCGATGCCCTCAGCTTTCAGGCCATCCTCATATGGTaGCTTCTGCAGCCAGTCCCCATCCAGCTCACTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VDALSFQAILIW*LLQPVPIQLTV Trigger: AACAGTGAGCTGGATGGGGACTGGCTGCAGAAGCCACCATATGAGGATGGCCTGAAAGCTGAGGGCATCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS CCA 72 bp | CTTGTCGATGCCCTCAGCTTTCAGGCCATCCTCATATaGTGGCTTCTGCAGCCAGTCCCCATCCAGCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: LVDALSFQAILI*WLLQPVPIQLT Trigger: AGTGAGCTGGATGGGGACTGGCTGCAGAAGCCACCATATGAGGATGGCCTGAAAGCTGAGGGCATCGACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS CAA 72 bp | CAGTCCCCATCCAGCTCACTGTTCCAGTCACTCGGCTaGCTGGCACCCGCATCCAGAAAGTGCTTTTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: QSPSSSLFQSLG*LAPASRKCFSQ Trigger: TTGGGAAAAGCACTTTCTGGATGCGGGTGCCAGCAAGCCGAGTGACTGGAACAGTGAGCTGGATGGGGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS GCA 72 bp | CAGTCACTCGGCTTGCTGGCACCCGCATCCAGAAAGTaGTTTTCCCAATCCTGGACTTTACTGCCTTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: QSLGLLAPASRK*FSQSWTLLPST Trigger: GGTGGAAGGCAGTAAAGTCCAGGATTGGGAAAAGCACTTTCTGGATGCGGGTGCCAGCAAGCCGAGTGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS GCA 72 bp | AGTCCCCATCCAGCTCACTGTTCCAGTCACTCGGCTTaGTGGCACCCGCATCCAGAAAGTGCTTTTCCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SPHPAHCSSHSA*WHPHPESAFPN Trigger: ATTGGGAAAAGCACTTTCTGGATGCGGGTGCCAGCAAGCCGAGTGACTGGAACAGTGAGCTGGATGGGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS GCA 72 bp | GTCTCATCTTCTGGTGGAGCCACACGTCCTTGTCGATaGCCTCAGCTTTCAGGCCATCCTCATATGGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VSSSGGATRPCR*PQLSGHPHMVA Trigger: AGCCACCATATGAGGATGGCCTGAAAGCTGAGGGCATCGACAAGGACGTGTGGCTCCACCAGAAGATGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS TCA 72 bp | ACTGCCTTCCACCTGATCCCAGTCCCTAGAGTCCAGTaGTGTCTTTTCCGTTTTCCTCAGCGATGTCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: TAFHLIPVPRVQ*CLFRFPQRCQV Trigger: AACCTGACATCGCTGAGGAAAACGGAAAAGACATCACTGGACTCTAGGGACTGGGATCAGGTGGAAGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS TCA 72 bp | CCCTGCCTGTGGAATCTGCTGAAATGGTTGTGCCTGTaGAACTTCCCCATCAGCAGATCCTCCTCATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PCLWNLLKWLCL*NFPISRSSSSS Trigger: AGAAGATGAGGAGGATCTGCTGATGGGGAAGTTTCACAGGCACAACCATTTCAGCAGATTCCACAGGCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS CAA 72 bp | TGCTTCACCGTGTACTGGATTACCAGGGTCTTCCCTTaGTTGCTGAATGGCTTGAAGCTCGCAGAGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CFTVYWITRVFP*LLNGLKLAEMA Trigger: TGCCATCTCTGCGAGCTTCAAGCCATTCAGCAACAAAGGGAAGACCCTGGTAATCCAGTACACGGTGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS TCA 72 bp | TCTCTTTATGCCCATAGAACTTCCCCGATGAGACTCTaGAGTGCCCAAACTGGGAGTCATTGGTGGACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLYAHRTSPMRL*SAQTGSHWWTA Trigger: TGCAGTCCACCAATGACTCCCAGTTTGGGCACTTCAGAGTCTCATCGGGGAAGTTCTATGGGCATAAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS TCA 72 bp | TGCTTTTCCCAATCCTGGACTTTACTGCCTTCCACCTaGTCCCAGTCCCTAGAGTCCAGTGATGTCTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CFSQSWTLLPST*SQSLESSDVFS Trigger: GGAAAAGACATCACTGGACTCTAGGGACTGGGATCAGGTGGAAGGCAGTAAAGTCCAGGATTGGGAAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS CCA 72 bp | TGGTTCCAGATCTCACCTGCCACAGCTCTAGACCAATaGCGCCAATGTTCTCAAACTCTGAGAGGTCATACT | + |
|
Preference number: 6 (lower is better) Translates to: WFQISPATALDQ*RQCSQTLRGHT Trigger: AGTATGACCTCTCAGAGTTTGAGAACATTGGCGCCATTGGTCTAGAGCTGTGGCAGGTGAGATCTGGAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS CAA 72 bp | TCCTCATCTTCTTCACGGGCCTTTTTCACTTCTTCCTaGGCCTGTATGGCATCCATCTCCTTTTCTGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSRAFFTSS*ACMASISFSGP Trigger: GGGTCCAGAAAAGGAGATGGATGCCATACAGGCCAAGGAAGAAGTGAAAAAGGCCCGTGAAGAAGATGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS CAA 90 bp | GCATCCATCTCCTTTTCTGGACCCTTAGTTTCTCCCCAGGTGGCCTaGCCAAACTTCTCTGCATATTCTTCATCATCTGTGATCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ASISFSGPLVSPQVA*PNFSAYSSSSVIRK Trigger: CTTCCTGATCACAGATGATGAAGAATATGCAGAGAAGTTTGGCAAGGCCACCTGGGGAGAAACTAAGGGTCCAGAAAAGGAGATGGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS CAA 90 bp | AGCAGATCCTCCTCATCTTCTTCACGGGCCTTTTTCACTTCTTCCTaGGCCTGTATGGCATCCATCTCCTTTTCTGGACCCTTAGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRSSSSSSRAFFTSS*ACMASISFSGPLVS Trigger: AGAAACTAAGGGTCCAGAAAAGGAGATGGATGCCATACAGGCCAAGGAAGAAGTGAAAAAGGCCCGTGAAGAAGATGAGGAGGATCTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS CAA 72 bp | CTTGAAGCTCGCAGAGATGGCATAGAATCGGCTGTTTaGGGTAGTCTGCAGGCCTTTGTCTTTCTCTTTATG | + |
|
Preference number: 6 (lower is better) Translates to: LEARRDGIESAV*GSLQAFVFLFM Trigger: CATAAAGAGAAAGACAAAGGCCTGCAGACTACCCAAAACAGCCGATTCTATGCCATCTCTGCGAGCTTCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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| CDS CAA 72 bp | TCCTTTTCTGGACCCTTAGTTTCTCCCCAGGTGGCCTaGCCAAACTTCTCTGCATATTCTTCATCATCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SFSGPLVSPQVA*PNFSAYSSSSV Trigger: CACAGATGATGAAGAATATGCAGAGAAGTTTGGCAAGGCCACCTGGGGAGAAACTAAGGGTCCAGAAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019876.12 ENSMUST00000109974.2 |
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| CDS TCA 72 bp | TTTGTCTTTCTCTTTATGCCCATAGAACTTCCCCGATaGGACTCTGAAGTGCCCAAACTGGGAGTCATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: FVFLFMPIELPR*DSEVPKLGVIG Trigger: ACCAATGACTCCCAGTTTGGGCACTTCAGAGTCTCATCGGGGAAGTTCTATGGGCATAAAGAGAAAGACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019876.12 |
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