Pregenerated sensors for CALR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003814Ensembl transcript IDs: ENSMUST00000003912.7
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGGCTGCTTTTAGCTCCTGATGTACATCCTCCCAGAGAAGGAGACACAATAGGGGCCTCAGTCCAGCCCTaGAGGCAGGTGGTGTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: RLLLAPDVHPPREGDTIGASVQP*RQVVWP Trigger: AGGCCACACCACCTGCCTTCAGGGCTGGACTGAGGC...CCCTATTGTGTCTCCTTCTCTGGGAGGATGTACATCAGGAGCTAAAAGCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTGCTTTTAGCTCCTGATGTACATCCTCCCAGAGAAGGAGACACAATAGGGACCACCCCCTTCTCCTaGCCTCCTCTGAGATGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RLLLAPDVHPPREGDTIGTTPFS*PPLRCR Trigger: CCTGCATCTCAGAGGAGGGCAGGAGAAGGGGGTGGT...CCCTATTGTGTCTCCTTCTCTGGGAGGATGTACATCAGGAGCTAAAAGCAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| 3UTR-3UTR GCA 90 bp | GACCTGATGGCTACTCTCCCATTTAGAGACTATGGGATACATATAAATGACATTGGGAGCAGCCAGCTCTaGGGCAGGGTGTTCAGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: DLMATLPFRDYGIHINDIGSSQL*GRVFRP Trigger: AGGCCTGAACACCCTGCCGCAGAGCTGGCTGCTCCC...AATGTCATTTATATGTATCCCATAGTCTCTAAATGGGAGAGTAGCCATCAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTGCTTTTAGCTCCTGATGTACATCCTCCCAGAGAAGGAGACACAATAGGGGTAGTGACCAAAAGATaGAGAAAGGGAGGGACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: RLLLAPDVHPPREGDTIGVVTKR*RKGGTE Trigger: TTCTGTCCCTCCCTTTCTCCATCTTTTGGTCACTAC...CCCTATTGTGTCTCCTTCTCTGGGAGGATGTACATCAGGAGCTAAAAGCAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGGAGAAAGGGAGGGACAGAAGGAAACCAGATGAGGGCTaGAGGAGAATTAAAGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: FLELEGSDQKMEKGRDRRKPDEG*RRIKDK Trigger: TTTGTCTTTAATTCTCCTTCAGCCCTCATCTGGTTT...CCTTCTGTCCCTCCCTTTCTCCATCTTTTGGTCACTACCCTCCAACTCTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| 3UTR-3UTR TCA 90 bp | GACCTGATGGCTACTCTCCCATTTAGAGACTATGGGATACATATAAATGACATTAAGGGAGAAAGGGGATaGGAAGAGCCCCATTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: DLMATLPFRDYGIHINDIKGERG*EEPHSS Trigger: GGAAGAATGGGGCTCTTCTCATCCCCTTTCTCCCTT...AATGTCATTTATATGTATCCCATAGTCTCTAAATGGGAGAGTAGCCATCAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| 3UTR-3UTR TCA 90 bp | GACCTGATGGCTACTCTCCCATTTAGAGACTATGGGATACATATAAATGACATTGCTGCTTTTAGCTCCTaGTGTACATCCTCCCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: DLMATLPFRDYGIHINDIAAFSS*CTSSQR Trigger: TCTCTGGGAGGATGTACATCAGGAGCTAAAAGCAGC...AATGTCATTTATATGTATCCCATAGTCTCTAAATGGGAGAGTAGCCATCAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| 3UTR TCA 72 bp | CGTCACCCGCACCTGAGAAAGGCTGCTTTTAGCTCCTaGTGTACATCCTCCCAGAGAAGGAGACACAATAGG | + |
|
Preference number: 3 (lower is better) Translates to: RHPHLRKAAFSS*CTSSQRRRHNR Trigger: CCTATTGTGTCTCCTTCTCTGGGAGGATGTACATCAGGAGCTAAAAGCAGCCTTTCTCAGGTGCGGGTGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR GCA 90 bp | GGCTTCTCCTCTACACCCCTGTTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGATAGATGGCAGGGTCTaGGGCGGCCAGGCCGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GFSSTPLFLELEGSDQKMIDGRV*GGQAEE Trigger: CTCCTCGGCCTGGCCGCCGCAGACCCTGCCATCTAT...CATCTTTTGGTCACTACCCTCCAACTCTAGGAACAGGGGTGTAGAGGAGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR GCA 90 bp | GGCTTCTCCTCTACACCCCTGTTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGTCAGGGTCAGGGATGTaGTCTGGCTTGTCCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GFSSTPLFLELEGSDQKMSGSGM*SGLSQS Trigger: GGACTGGGACAAGCCAGAGCACATCCCTGACCCTGA...CATCTTTTGGTCACTACCCTCCAACTCTAGGAACAGGGGTGTAGAGGAGAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR TCA 90 bp | TTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGGAGAAAGGGAGGGACAGAAGGATCCTCCAAGGAGCCTaGCTCCACCTGGCTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLELEGSDQKMEKGRDRRILQGA*LHLAVV Trigger: GACAACAGCCAGGTGGAGTCAGGCTCCTTGGAGGAT...CCTTCTGTCCCTCCCTTTCTCCATCTTTTGGTCACTACCCTCCAACTCTAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CCA 90 bp | GGCTTCTCCTCTACACCCCTGTTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGCCCAGTCTTCCGGCTTaGCAGCATCAGGGTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GFSSTPLFLELEGSDQKMPSLPA*QHQGPL Trigger: TAAAGGACCCTGATGCTGCCAAGCCGGAAGACTGGG...CATCTTTTGGTCACTACCCTCCAACTCTAGGAACAGGGGTGTAGAGGAGAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CCA 90 bp | AGGCTGCTTTTAGCTCCTGATGTACATCCTCCCAGAGAAGGAGACACAATAGGGGTCAGGGATGTGCTCTaGCTTGTCCCAGTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLLAPDVHPPREGDTIGVRDVL*LVPVLR Trigger: CCTGAGGACTGGGACAAGCCAGAGCACATCCCTGAC...CCCTATTGTGTCTCCTTCTCTGGGAGGATGTACATCAGGAGCTAAAAGCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR GCA 90 bp | AGGCTGCTTTTAGCTCCTGATGTACATCCTCCCAGAGAAGGAGACACAATAGGGCACCCCACGTCTCATTaGCAAACTCCTCTGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLLAPDVHPPREGDTIGHPTSH*QTPLHR Trigger: CCTATGCAGAGGAGTTTGGCAATGAGACGTGGGGTG...CCCTATTGTGTCTCCTTCTCTGGGAGGATGTACATCAGGAGCTAAAAGCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CCA 90 bp | GCAGATGAAATCTCAAGCCTAGGGCTTCTCCTCTACACCCCTGTTCCTAGAGTTAGCTCATCCTTGGCTTaGCCAGGGGATTCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ADEISSLGLLLYTPVPRVSSSLA*PGDSSS Trigger: TGAGGAAGAATCCCCTGGCCAAGCCAAGGATGAGCT...AACTCTAGGAACAGGGGTGTAGAGGAGAAGCCCTAGGCTTGAGATTTCATCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR GCA 90 bp | GCAGATGAAATCTCAAGCCTAGGGCTTCTCCTCTACACCCCTGTTCCTAGAGTTGCATCTTGGCTTGTCTaGAGCCCTTTATCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ADEISSLGLLLYTPVPRVASWLV*SPLSFS Trigger: GGAGAAGGATAAAGGGCTGCAGACAAGCCAAGATGC...AACTCTAGGAACAGGGGTGTAGAGGAGAAGCCCTAGGCTTGAGATTTCATCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR GCA 90 bp | AGGCTGCTTTTAGCTCCTGATGTACATCCTCCCAGAGAAGGAGACACAATAGGGCTCTGCTCCTCATCCTaGTTGTCCTTCATCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLLLAPDVHPPREGDTIGLCSSS*LSFICF Trigger: GAAGCAGATGAAGGACAAGCAGGATGAGGAGCAGAG...CCCTATTGTGTCTCCTTCTCTGGGAGGATGTACATCAGGAGCTAAAAGCAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGGAGAAAGGGAGGGACAGAAGGTGTACCACCAGTGTCTaGCCCTTATTGCTGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLELEGSDQKMEKGRDRRCTTSV*PLLLKG Trigger: ACCCTTCAGCAATAAGGGCCAGACACTGGTGGTACA...CCTTCTGTCCCTCCCTTTCTCCATCTTTTGGTCACTACCCTCCAACTCTAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CCA 90 bp | AGGCTGCTTTTAGCTCCTGATGTACATCCTCCCAGAGAAGGAGACACAATAGGGTGGGGTCATCGATCTTaGCTCGTTCATCCCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLLLAPDVHPPREGDTIGWGHRS*LVHPSL Trigger: AAGACTGGGATGAACGAGCCAAGATCGATGACCCCA...CCCTATTGTGTCTCCTTCTCTGGGAGGATGTACATCAGGAGCTAAAAGCAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR GCA 90 bp | TTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGGAGAAAGGGAGGGACAGAAGGGAATTTGGCGGACAGTaGGTAAAATCGGGCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLELEGSDQKMEKGRDRREFGGQ*VKSGIL Trigger: CAAGATGCCCGATTTTACGCACTGTCCGCCAAATTC...CCTTCTGTCCCTCCCTTTCTCCATCTTTTGGTCACTACCCTCCAACTCTAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTCTACACCCCTGTTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGGAGTGCTTGTCCTTCATCTaGTTCTCTGCAGCCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSSTPLFLELEGSDQKMECLSFI*FSAALV Trigger: TACCAAGGCTGCAGAGAAGCAGATGAAGGACAAGCA...CTCCATCTTTTGGTCACTACCCTCCAACTCTAGGAACAGGGGTGTAGAGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CCA 90 bp | GCAGATGAAATCTCAAGCCTAGGGCTTCTCCTCTACACCCCTGTTCCTAGAGTTCTCATAGGTGTTGTCTaGCCGCACAATCAGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ADEISSLGLLLYTPVPRVLIGVV*PHNQCV Trigger: TACACACTGATTGTGCGGCCAGACAACACCTATGAG...AACTCTAGGAACAGGGGTGTAGAGGAGAAGCCCTAGGCTTGAGATTTCATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR GCA 90 bp | TTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGGAGAAAGGGAGGGACAGAAGGTCGATATTCTGCTCATaGTTCACCGTGAACTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: FLELEGSDQKMEKGRDRRSIFCS*FTVNCT Trigger: GGTACAGTTCACGGTGAAGCATGAGCAGAATATCGA...CCTTCTGTCCCTCCCTTTCTCCATCTTTTGGTCACTACCCTCCAACTCTAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CCA 90 bp | GGCTTCTCCTCTACACCCCTGTTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGCTTTATCTTCTTGGGTaGCAGAAAGTCCCAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: GFSSTPLFLELEGSDQKMLYLLG*QKVPII Trigger: GATGATTGGGACTTTCTGCCACCCAAGAAGATAAAG...CATCTTTTGGTCACTACCCTCCAACTCTAGGAACAGGGGTGTAGAGGAGAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CCA 90 bp | GCAGATGAAATCTCAAGCCTAGGGCTTCTCCTCTACACCCCTGTTCCTAGAGTTAGGATTTTGAATCACTaGTGGTTCCCACTCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: ADEISSLGLLLYTPVPRVRILNH*WFPLSI Trigger: GATGGAGAGTGGGAACCACCAGTGATTCAAAATCCT...AACTCTAGGAACAGGGGTGTAGAGGAGAAGCCCTAGGCTTGAGATTTCATCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CCA 90 bp | GCAGATGAAATCTCAAGCCTAGGGCTTCTCCTCTACACCCCTGTTCCTAGAGTTAGGGTTGTCAATTTCTaGGTGTATCCAGGTACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ADEISSLGLLLYTPVPRVRVVNF*VYPGTL Trigger: AAGGGTACCTGGATACACCCAGAAATTGACAACCCT...AACTCTAGGAACAGGGGTGTAGAGGAGAAGCCCTAGGCTTGAGATTTCATCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR GCA 90 bp | AGGCTGCTTTTAGCTCCTGATGTACATCCTCCCAGAGAAGGAGACACAATAGGGATAGGCATAGATATTTaGATCGGGGGAGTATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLLAPDVHPPREGDTIGIGIDI*IGGVFR Trigger: CCTGAATACTCCCCCGATGCAAATATCTATGCCTAT...CCCTATTGTGTCTCCTTCTCTGGGAGGATGTACATCAGGAGCTAAAAGCAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTCTACACCCCTGTTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGGAGATTTTGAATCACTGGTaGTTCCCACTCTCCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSSTPLFLELEGSDQKMEILNHW*FPLSIH Trigger: ATGGATGGAGAGTGGGAACCACCAGTGATTCAAAAT...CTCCATCTTTTGGTCACTACCCTCCAACTCTAGGAACAGGGGTGTAGAGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR TCA 90 bp | TTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGGAGAAAGGGAGGGACAGAAGGCATGATGTTATATTCTaGGTCTCCATGCATGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLELEGSDQKMEKGRDRRHDVIF*VSMHVL Trigger: AAGGACATGCATGGAGACTCAGAATATAACATCATG...CCTTCTGTCCCTCCCTTTCTCCATCTTTTGGTCACTACCCTCCAACTCTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR TCA 90 bp | AGAATCAAAACTTACACGTCTATGAGTTTAGGATCAAGACCTGATGGCTACTCTAGATTGTCCCGGACTTaGCCTGCCAGAGATCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RIKTYTSMSLGSRPDGYSRLSRT*PARDLG Trigger: GCCTAGATCTCTGGCAGGTCAAGTCCGGGACAATCT...AGAGTAGCCATCAGGTCTTGATCCTAAACTCATAGACGTGTAAGTTTTGATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR GCA 90 bp | AGAATCAAAACTTACACGTCTATGAGTTTAGGATCAAGACCTGATGGCTACTCTCATGAACCTTCTTGGTaGCAGGACCGCAGATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RIKTYTSMSLGSRPDGYSHEPSW*QDRRCP Trigger: CGGACATCTGCGGTCCTGGCACCAAGAAGGTTCATG...AGAGTAGCCATCAGGTCTTGATCCTAAACTCATAGACGTGTAAGTTTTGATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CCA 90 bp | AGAATCAAAACTTACACGTCTATGAGTTTAGGATCAAGACCTGATGGCTACTCTCCCAGTCCTCAGGCTTaGAATCTGTGGGGTCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: RIKTYTSMSLGSRPDGYSPSPQA*NLWGHR Trigger: TCGATGACCCCACAGATTCCAAGCCTGAGGACTGGG...AGAGTAGCCATCAGGTCTTGATCCTAAACTCATAGACGTGTAAGTTTTGATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR TCA 90 bp | GACCTGATGGCTACTCTCCCATTTAGAGACTATGGGATACATATAAATGACATTTCTGGCCCTTATTGCTaGAGGGTTCGAATTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DLMATLPFRDYGIHINDISGPYC*RVRIWR Trigger: CCGCCAAATTCGAACCCTTCAGCAATAAGGGCCAGA...AATGTCATTTATATGTATCCCATAGTCTCTAAATGGGAGAGTAGCCATCAGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CCA 90 bp | AGAATCAAAACTTACACGTCTATGAGTTTAGGATCAAGACCTGATGGCTACTCTCCATGCATGTCCTTCTaGTCCAAACCACTCGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RIKTYTSMSLGSRPDGYSPCMSF*SKPLGN Trigger: GTTTCCGAGTGGTTTGGACCAGAAGGACATGCATGG...AGAGTAGCCATCAGGTCTTGATCCTAAACTCATAGACGTGTAAGTTTTGATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR TCA 90 bp | AGAATCAAAACTTACACGTCTATGAGTTTAGGATCAAGACCTGATGGCTACTCTACCGGATATCCTTGTTaGTCAGCACATTCTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RIKTYTSMSLGSRPDGYSTGYPC*SAHSCP Trigger: AGGGCAAGAATGTGCTGATCAACAAGGATATCCGGT...AGAGTAGCCATCAGGTCTTGATCCTAAACTCATAGACGTGTAAGTTTTGATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR GCA 90 bp | GACCTGATGGCTACTCTCCCATTTAGAGACTATGGGATACATATAAATGACATTCCACAGTCGATATTCTaGTCATGCTTCACCGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLMATLPFRDYGIHINDIPQSIF*SCFTVN Trigger: GTTCACGGTGAAGCATGAGCAGAATATCGACTGTGG...AATGTCATTTATATGTATCCCATAGTCTCTAAATGGGAGAGTAGCCATCAGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR GCA 90 bp | GACCTGATGGCTACTCTCCCATTTAGAGACTATGGGATACATATAAATGACATTATTGCCAAACTCCTCTaGATAGGCCTCATCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DLMATLPFRDYGIHINDIIAKLL*IGLIIG Trigger: ACCAATGATGAGGCCTATGCAGAGGAGTTTGGCAAT...AATGTCATTTATATGTATCCCATAGTCTCTAAATGGGAGAGTAGCCATCAGGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CCA 90 bp | GACCTGATGGCTACTCTCCCATTTAGAGACTATGGGATACATATAAATGACATTGGTACCCTTGTAATCTaGGTTGTCAATTTGACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLMATLPFRDYGIHINDIGTLVI*VVNLTW Trigger: CCACGTCAAATTGACAACCCAGATTACAAGGGTACC...AATGTCATTTATATGTATCCCATAGTCTCTAAATGGGAGAGTAGCCATCAGGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS GCA 90 bp | GGCATCTCCGTCCAAGAACTGCTCTTTGAAATAGATGGCAGGGTCTaGGGCGGCCAGGCCGAGGAGGCCAAGCAGGAGCGGCACCGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GISVQELLFEIDGRV*GGQAEEAKQERHRK Trigger: CTTTCGGTGCCGCTCCTGCTTGGCCTCCTCGGCCTGGCCGCCGCAGACCCTGCCATCTATTTCAAAGAGCAGTTCTTGGACGGAGATGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS GCA 90 bp | TCTTCATCCCAGTCCTCAGGCTTCTTAGCATCAGGGTCAGGGATGTaGTCTGGCTTGTCCCAGTCCTCAGGCTTGGAATCTGTGGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSQSSGFLASGSGM*SGLSQSSGLESVGS Trigger: TGACCCCACAGATTCCAAGCCTGAGGACTGGGACAAGCCAGAGCACATCCCTGACCCTGATGCTAAGAAGCCTGAGGACTGGGATGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CAA 90 bp | TTCTCCTCTACACCCCTGTTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGGAGTCCCAGTCTTCCGGCTaGGCAGCATCAGGGTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FSSTPLFLELEGSDQKMESQSSG*AASGSF Trigger: AAAGGACCCTGATGCTGCCAAGCCGGAAGACTGGGA...CTCCATCTTTTGGTCACTACCCTCCAACTCTAGGAACAGGGGTGTAGAGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS TCA 90 bp | GGTGCCAGGACCGCAGATGTCCGGACCAAACATGATGTTATATTCTaGGTCTCCATGCATGTCCTTCTGGTCCAAACCACTCGGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: GARTADVRTKHDVIF*VSMHVLLVQTTRKQ Trigger: CTGTTTCCGAGTGGTTTGGACCAGAAGGACATGCATGGAGACTCAGAATATAACATCATGTTTGGTCCGGACATCTGCGGTCCTGGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS GCA 90 bp | CAGTGTCTGGCCCTTATTGCTGAAGGGTTCGAATTTGGCGGACAGTaGGTAAAATCGGGCATCTTGGCTTGTCTGCAGCCCTTTATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QCLALIAEGFEFGGQ*VKSGILACLQPFIL Trigger: AAGGATAAAGGGCTGCAGACAAGCCAAGATGCCCGATTTTACGCACTGTCCGCCAAATTCGAACCCTTCAGCAATAAGGGCCAGACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CAA 90 bp | TTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGGAGAAAGGGAGGGACAGAAGGGTAAAATCGGGCATCTaGGCTTGTCTGCAGCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLELEGSDQKMEKGRDRRVKSGI*ACLQPF Trigger: AAAGGGCTGCAGACAAGCCAAGATGCCCGATTTTAC...CCTTCTGTCCCTCCCTTTCTCCATCTTTTGGTCACTACCCTCCAACTCTAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CAA 90 bp | TTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGGAGAAAGGGAGGGACAGAAGGCACCGGATATCCTTGTaGATCAGCACATTCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FLELEGSDQKMEKGRDRRHRISL*ISTFLP Trigger: GGGCAAGAATGTGCTGATCAACAAGGATATCCGGTG...CCTTCTGTCCCTCCCTTTCTCCATCTTTTGGTCACTACCCTCCAACTCTAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CAA 90 bp | TTCTCCTCTACACCCCTGTTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGGAGATCTGGGTTGTCAATTaGACGTGGTTTCCACTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSSTPLFLELEGSDQKMEIWVVN*TWFPLA Trigger: GGCGAGTGGAAACCACGTCAAATTGACAACCCAGAT...CTCCATCTTTTGGTCACTACCCTCCAACTCTAGGAACAGGGGTGTAGAGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CAA 90 bp | AGGCTGCTTTTAGCTCCTGATGTACATCCTCCCAGAGAAGGAGACACAATAGGGGGGGAGTATTCAGGGTaGTCAATTTCTGGGTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: RLLLAPDVHPPREGDTIGGEYSG*SISGCI Trigger: GATACACCCAGAAATTGACAACCCTGAATACTCCCC...CCCTATTGTGTCTCCTTCTCTGGGAGGATGTACATCAGGAGCTAAAAGCAGCCT 49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CAA 90 bp | GGCTTCTCCTCTACACCCCTGTTCCTAGAGTTGGAGGGTAGTGACCAAAAGATGCATAGGCATAGATATTaGCATCGGGGGAGTATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GFSSTPLFLELEGSDQKMHRHRY*HRGSIQ Trigger: CTGAATACTCCCCCGATGCAAATATCTATGCCTATG...CATCTTTTGGTCACTACCCTCCAACTCTAGGAACAGGGGTGTAGAGGAGAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CCA 90 bp | TTCAGGGTTGTCAATTTCTGGGTGTATCCAGGTACCCTTGTAATCTaGGTTGTCAATTTGACGTGGTTTCCACTCGCCCTTGTATTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FRVVNFWVYPGTLVI*VVNLTWFPLALVFR Trigger: CCTGAATACAAGGGCGAGTGGAAACCACGTCAAATTGACAACCCAGATTACAAGGGTACCTGGATACACCCAGAAATTGACAACCCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CAA 90 bp | AGGCTGCTTTTAGCTCCTGATGTACATCCTCCCAGAGAAGGAGACACAATAGGGTTACACCGGATATCCTaGTTGATCAGCACATTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLLLAPDVHPPREGDTIGLHRIS*LISTFL Trigger: CAAGAATGTGCTGATCAACAAGGATATCCGGTGTAA...CCCTATTGTGTCTCCTTCTCTGGGAGGATGTACATCAGGAGCTAAAAGCAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CAA 90 bp | AGGCTGCTTTTAGCTCCTGATGTACATCCTCCCAGAGAAGGAGACACAATAGGGCTTGTATTCAGGATTTaGAATCACTGGTGGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLLLAPDVHPPREGDTIGLVFRI*NHWWFP Trigger: TGGGAACCACCAGTGATTCAAAATCCTGAATACAAG...CCCTATTGTGTCTCCTTCTCTGGGAGGATGTACATCAGGAGCTAAAAGCAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CCA 90 bp | GGCATAGATATTTGCATCGGGGGAGTATTCAGGGTTGTCAATTTCTaGGTGTATCCAGGTACCCTTGTAATCTGGGTTGTCAATTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: GIDICIGGVFRVVNF*VYPGTLVIWVVNLT Trigger: CGTCAAATTGACAACCCAGATTACAAGGGTACCTGGATACACCCAGAAATTGACAACCCTGAATACTCCCCCGATGCAAATATCTATGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CAA 90 bp | GACCTGATGGCTACTCTCCCATTTAGAGACTATGGGATACATATAAATGACATTGTGGGGTCATCGATCTaGGCTCGTTCATCCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: DLMATLPFRDYGIHINDIVGSSI*ARSSQS Trigger: AGACTGGGATGAACGAGCCAAGATCGATGACCCCAC...AATGTCATTTATATGTATCCCATAGTCTCTAAATGGGAGAGTAGCCATCAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS-3UTR CAA 90 bp | GACCTGATGGCTACTCTCCCATTTAGAGACTATGGGATACATATAAATGACATTTTGGTGATGAGGAAATaGTCAAAGATTGTCCCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: DLMATLPFRDYGIHINDILVMRK*SKIVPD Trigger: GTCCGGGACAATCTTTGACAATTTCCTCATCACCAA...AATGTCATTTATATGTATCCCATAGTCTCTAAATGGGAGAGTAGCCATCAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CCA 72 bp | CTCAGGCTTCTTAGCATCAGGGTCAGGGATGTGCTCTaGCTTGTCCCAGTCCTCAGGCTTGGAATCTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRLLSIRVRDVL*LVPVLRLGICG Trigger: CCCACAGATTCCAAGCCTGAGGACTGGGACAAGCCAGAGCACATCCCTGACCCTGATGCTAAGAAGCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CAA 72 bp | CAGTCCTCAGGCTTGGAATCTGTGGGGTCATCGATCTaGGCTCGTTCATCCCAGTCTTCCGGCTTGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QSSGLESVGSSI*ARSSQSSGLAA Trigger: TGCTGCCAAGCCGGAAGACTGGGATGAACGAGCCAAGATCGATGACCCCACAGATTCCAAGCCTGAGGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CCA 72 bp | AGTCCTCAGGCTTGGAATCTGTGGGGTCATCGATCTTaGCTCGTTCATCCCAGTCTTCCGGCTTGGCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SPQAWNLWGHRS*LVHPSLPAWQH Trigger: ATGCTGCCAAGCCGGAAGACTGGGATGAACGAGCCAAGATCGATGACCCCACAGATTCCAAGCCTGAGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS GCA 72 bp | GCCCTTATTGCTGAAGGGTTCGAATTTGGCGGACAGTaGGTAAAATCGGGCATCTTGGCTTGTCTGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ALIAEGFEFGGQ*VKSGILACLQP Trigger: GGGCTGCAGACAAGCCAAGATGCCCGATTTTACGCACTGTCCGCCAAATTCGAACCCTTCAGCAATAAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CCA 72 bp | CTTCCGGCTTGGCAGCATCAGGGTCCTTTATCTTCTTaGGTGGCAGAAAGTCCCAATCATCCTCCAAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LPAWQHQGPLSS*VAESPNHPPRS Trigger: GCTCCTTGGAGGATGATTGGGACTTTCTGCCACCCAAGAAGATAAAGGACCCTGATGCTGCCAAGCCGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CAA 72 bp | CCAAAATCGGACTTATGTTTGGATTCGACCCAGCGGTaGGTCCAGGCATCTCCGTCCAAGAACTGCTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: PKSDLCLDSTQR*VQASPSKNCSL Trigger: CAAAGAGCAGTTCTTGGACGGAGATGCCTGGACCAACCGCTGGGTCGAATCCAAACATAAGTCCGATTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CAA 72 bp | GAACTGAGGACAAATTTGCCAAAATCGGACTTATGTTaGGATTCGACCCAGCGGTTGGTCCAGGCATCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: ELRTNLPKSDLC*DSTQRLVQASP Trigger: CGGAGATGCCTGGACCAACCGCTGGGTCGAATCCAAACATAAGTCCGATTTTGGCAAATTTGTCCTCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CAA 72 bp | TCTTCTTCTTCCTTAAGCCTCTGCTCCTCATCCTGCTaGTCCTTCATCTGCTTCTCTGCAGCCTTGGTAACA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSLSLCSSSC*SFICFSAALVT Trigger: TGTTACCAAGGCTGCAGAGAAGCAGATGAAGGACAAGCAGGATGAGGAGCAGAGGCTTAAGGAAGAAGAAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS GCA 72 bp | TTACGCTTCTTGTCCTCTTCTTCTTCCTTAAGCCTCTaGTCCTCATCCTGCTTGTCCTTCATCTGCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LRFLSSSSSLSL*SSSCLSFICFS Trigger: AGAGAAGCAGATGAAGGACAAGCAGGATGAGGAGCAGAGGCTTAAGGAAGAAGAAGAGGACAAGAAGCGTAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CCA 72 bp | GTCAATTTCTGGGTGTATCCAGGTACCCTTGTAATCTaGGTTGTCAATTTGACGTGGTTTCCACTCGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VNFWVYPGTLVI*VVNLTWFPLAL Trigger: AAGGGCGAGTGGAAACCACGTCAAATTGACAACCCAGATTACAAGGGTACCTGGATACACCCAGAAATTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CCA 72 bp | ATTTGCATCGGGGGAGTATTCAGGGTTGTCAATTTCTaGGTGTATCCAGGTACCCTTGTAATCTGGGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ICIGGVFRVVNF*VYPGTLVIWVV Trigger: GACAACCCAGATTACAAGGGTACCTGGATACACCCAGAAATTGACAACCCTGAATACTCCCCCGATGCAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CAA 72 bp | TTGGTGATGAGGAAATTGTCAAAGATTGTCCCGGACTaGACCTGCCAGAGATCTAGGCCCAGTACAGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LVMRKLSKIVPD*TCQRSRPSTAK Trigger: TTTTGCTGTACTGGGCCTAGATCTCTGGCAGGTCAAGTCCGGGACAATCTTTGACAATTTCCTCATCACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS GCA 72 bp | ATGAGGAAATTGTCAAAGATTGTCCCGGACTTGACCTaGCAGAGATCTAGGCCCAGTACAGCAAAACTATCA | + |
|
Preference number: 6 (lower is better) Translates to: MRKLSKIVPDLT*QRSRPSTAKLS Trigger: TGATAGTTTTGCTGTACTGGGCCTAGATCTCTGGCAGGTCAAGTCCGGGACAATCTTTGACAATTTCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CAA 72 bp | GTGTATCCAGGTACCCTTGTAATCTGGGTTGTCAATTaGACGTGGTTTCCACTCGCCCTTGTATTCAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: VYPGTLVIWVVN*TWFPLALVFRI Trigger: AATCCTGAATACAAGGGCGAGTGGAAACCACGTCAAATTGACAACCCAGATTACAAGGGTACCTGGATACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CAA 90 bp | AGAGATCTAGGCCCAGTACAGCAAAACTATCATAGGCATAGATATTaGCATCGGGGGAGTATTCAGGGTTGTCAATTTCTGGGTGTATCC | + |
|
Preference number: 6 (lower is better) Translates to: RDLGPVQQNYHRHRY*HRGSIQGCQFLGVS Trigger: GGATACACCCAGAAATTGACAACCCTGAATACTCCCCCGATGCAAATATCTATGCCTATGATAGTTTTGCTGTACTGGGCCTAGATCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CCA 72 bp | CCAGGTACCCTTGTAATCTGGGTTGTCAATTTGACGTaGTTTCCACTCGCCCTTGTATTCAGGATTTTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: PGTLVIWVVNLT*FPLALVFRILN Trigger: ATTCAAAATCCTGAATACAAGGGCGAGTGGAAACCACGTCAAATTGACAACCCAGATTACAAGGGTACCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CAA 72 bp | GGCCCAGTACAGCAAAACTATCATAGGCATAGATATTaGCATCGGGGGAGTATTCAGGGTTGTCAATTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GPVQQNYHRHRY*HRGSIQGCQFL Trigger: CAGAAATTGACAACCCTGAATACTCCCCCGATGCAAATATCTATGCCTATGATAGTTTTGCTGTACTGGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||
| CDS CAA 90 bp | AATTTCTGGGTGTATCCAGGTACCCTTGTAATCTGGGTTGTCAATTaGACGTGGTTTCCACTCGCCCTTGTATTCAGGATTTTGAATCAC | + |
|
Preference number: 6 (lower is better) Translates to: NFWVYPGTLVIWVVN*TWFPLALVFRILNH Trigger: GTGATTCAAAATCCTGAATACAAGGGCGAGTGGAAACCACGTCAAATTGACAACCCAGATTACAAGGGTACCTGGATACACCCAGAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003912.7 |
||