Pregenerated sensors for CALN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060371Ensembl transcript IDs: ENSMUST00000086029.10, ENSMUST00000111287.8, ENSMUST00000111288.4, ENSMUST00000141131.5, ENSMUST00000202728.2
Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGACCGCAAGGAGCTGCACCCTGCTTAATGGCTTTCCCCCTCCATaGCTTGGTGGGAGGGGGTCTCCACTGGGTGGAGGAAGGAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: GTARSCTLLNGFPPP*LGGRGSPLGGGRKP Trigger: TGGCTTCCTTCCTCCACCCAGTGGAGACCCCCTCCCACCAAGGCATGGAGGGGGAAAGCCATTAAGCAGGGTGCAGCTCCTTGCGGTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| 3UTR TCA 90 bp | GAAGGCAGGCTGCTGCCCGGATGTTCCAGACTCCAGGCAGTTTTATaGAGTGACTCTGTGCCCCTTGGGCTTCTTGGGACCTCTGACCTG | + |
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Preference number: 1 (lower is better) Translates to: EGRLLPGCSRLQAVL*SDSVPLGLLGTSDL Trigger: CAGGTCAGAGGTCCCAAGAAGCCCAAGGGGCACAGAGTCACTTCATAAAACTGCCTGGAGTCTGGAACATCCGGGCAGCAGCCTGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR TCA 90 bp | GGTACCAATGCATCCATCCATAAAGGTCCAGATCTCCCGTGTGAATaGACAGAGTCTGCCCGCGGGGCATGCACATGCGCAGTGAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: GTNASIHKGPDLPCE*TESARGACTCAVSW Trigger: CCAGCTCACTGCGCATGTGCATGCCCCGCGGGCAGACTCTGTTCATTCACACGGGAGATCTGGACCTTTATGGATGGATGCATTGGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| 3UTR GCA 90 bp | AGGGCAGGTTTGCAAAGGGCACCGGAAGAAGGGAAGGCAGGCTGCTaGCCGGATGTTCCAGACTCCAGGCAGTTTTATGAAGTGACTCTG | + |
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Preference number: 1 (lower is better) Translates to: RAGLQRAPEEGKAGC*PDVPDSRQFYEVTL Trigger: CAGAGTCACTTCATAAAACTGCCTGGAGTCTGGAACATCCGGGCAGCAGCCTGCCTTCCCTTCTTCCGGTGCCCTTTGCAAACCTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR CCA 90 bp | CTGCCTCTGCCTCCCATGGACTGGGACTGCAGGTGTATGCCACCATaGCTGGCTCAAACAGACTCTGAGGTGAAATGGAGAAGAAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: LPLPPMDWDCRCMPP*LAQTDSEVKWRRRD Trigger: GTCCCTTCTTCTCCATTTCACCTCAGAGTCTGTTTGAGCCAGCCATGGTGGCATACACCTGCAGTCCCAGTCCATGGGAGGCAGAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR TCA 90 bp | GCTGTCCTGGTATCTGTCATTCATGGAGGTCTGGGGATGTGGAGCTaGGCTGGCAGCAAGAATGCGCCAGTCACTGAGTCATCTCATGAC | + |
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Preference number: 1 (lower is better) Translates to: AVLVSVIHGGLGMWS*AGSKNAPVTESSHD Trigger: GTCATGAGATGACTCAGTGACTGGCGCATTCTTGCTGCCAGCTCAGCTCCACATCCCCAGACCTCCATGAATGACAGATACCAGGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR GCA 90 bp | ATAAGGGCAGGTTTGCAAAGGGCACCGGAAGAAGGGAAGGCAGGCTaGTGCCCGGATGTTCCAGACTCCAGGCAGTTTTATGAAGTGACT | + |
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Preference number: 1 (lower is better) Translates to: IRAGLQRAPEEGKAG*CPDVPDSRQFYEVT Trigger: AGTCACTTCATAAAACTGCCTGGAGTCTGGAACATCCGGGCAGCAGCCTGCCTTCCCTTCTTCCGGTGCCCTTTGCAAACCTGCCCTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR TCA 90 bp | CGCGTAGAGGTGAACTGGAGGAAGACCCTATGTGGAGACCTTGCGTaGTCCAAGTCTAAGAAGGGAGTACGTAAGGAGGGAGCAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: RVEVNWRKTLCGDLA*SKSKKGVRKEGAER Trigger: TCTCTCTGCTCCCTCCTTACGTACTCCCTTCTTAGACTTGGATCACGCAAGGTCTCCACATAGGGTCTTCCTCCAGTTCACCTCTACGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR TCA 90 bp | CCTCTCCTTCAGAGGGTGTCTCAGCTGCCTATGTATGGCTTTCCTTaGGCAAGAGGAAGCAGAACTTTCTGGACCCGTCAGCCAACCAAC | + |
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Preference number: 1 (lower is better) Translates to: PLLQRVSQLPMYGFP*ARGSRTFWTRQPTN Trigger: GTTGGTTGGCTGACGGGTCCAGAAAGTTCTGCTTCCTCTTGCTCAAGGAAAGCCATACATAGGCAGCTGAGACACCCTCTGAAGGAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR TCA 90 bp | AGTCCCCTAAGTCTAAAGGACACCACTAGACCAGACTTCTTACACTaGTGCATTCAGTTCCTGTGTGCCTCGGATGCGGAGGATGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: SPLSLKDTTRPDFLH*CIQFLCASDAEDAG Trigger: CCCAGCATCCTCCGCATCCGAGGCACACAGGAACTGAATGCATCAGTGTAAGAAGTCTGGTCTAGTGGTGTCCTTTAGACTTAGGGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR TCA 90 bp | ACTGCAGGTGTATGCCACCATGGCTGGCTCAAACAGACTCTGAGGTaGAATGGAGAAGAAGGGACAAAGACTTGGGGACCCTATTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: TAGVCHHGWLKQTLR*NGEEGTKTWGPYCC Trigger: GCAGCAATAGGGTCCCCAAGTCTTTGTCCCTTCTTCTCCATTTCACCTCAGAGTCTGTTTGAGCCAGCCATGGTGGCATACACCTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR TCA 90 bp | CTGGGACTGCAGGTGTATGCCACCATGGCTGGCTCAAACAGACTCTaGGGTGAAATGGAGAAGAAGGGACAAAGACTTGGGGACCCTATT | + |
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Preference number: 1 (lower is better) Translates to: LGLQVYATMAGSNRL*GEMEKKGQRLGDPI Trigger: AATAGGGTCCCCAAGTCTTTGTCCCTTCTTCTCCATTTCACCTCAGAGTCTGTTTGAGCCAGCCATGGTGGCATACACCTGCAGTCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR GCA 90 bp | TTCTCTAATGGCAGCACAGGCAAGAAAGCTGGGAGCCAGGCTCTCTaGAGATTCCAAGATGCTGGTGCGGGATGGACTTCAGAAACAGAA | + |
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Preference number: 1 (lower is better) Translates to: FSNGSTGKKAGSQAL*RFQDAGAGWTSETE Trigger: TTCTGTTTCTGAAGTCCATCCCGCACCAGCATCTTGGAATCTGCAGAGAGCCTGGCTCCCAGCTTTCTTGCCTGTGCTGCCATTAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| 3UTR CCA 90 bp | GGGAAGGTTAGATGTGGGCCAATCTTAACTTACAGATGTCAAATATaGCGGCTCAGAGGGGCTCTGTTACTTCGGATGCCTGGGGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: GKVRCGPILTYRCQI*RLRGALLLRMPGVW Trigger: CCACACCCCAGGCATCCGAAGTAACAGAGCCCCTCTGAGCCGCCATATTTGACATCTGTAAGTTAAGATTGGCCCACATCTAACCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| 3UTR CCA 90 bp | AGGTGTATGCCACCATGGCTGGCTCAAACAGACTCTGAGGTGAAATaGAGAAGAAGGGACAAAGACTTGGGGACCCTATTGCTGCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: RCMPPWLAQTDSEVK*RRRDKDLGTLLLLP Trigger: AGGGAGCAGCAATAGGGTCCCCAAGTCTTTGTCCCTTCTTCTCCATTTCACCTCAGAGTCTGTTTGAGCCAGCCATGGTGGCATACACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR TCA 90 bp | AAGACAGCCCTTTTGTGTCCCTGCCAAGGAGATGGAGTTGATCCGTaGCCCCGGTTGCACTGCAAACTTGAGTTCTTTACTGAAGGGTAC | + |
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Preference number: 1 (lower is better) Translates to: KTALLCPCQGDGVDP*PRLHCKLEFFTEGY Trigger: GTACCCTTCAGTAAAGAACTCAAGTTTGCAGTGCAACCGGGGTCACGGATCAACTCCATCTCCTTGGCAGGGACACAAAAGGGCTGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| 3UTR GCA 90 bp | TATGAAGTGACTCTGTGCCCCTTGGGCTTCTTGGGACCTCTGACCTaGTCCCTCCTCTCTATGCTATGGCTCAAACCTAGTTTGACTTGT | + |
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Preference number: 1 (lower is better) Translates to: YEVTLCPLGFLGPLT*SLLSMLWLKPSLTC Trigger: ACAAGTCAAACTAGGTTTGAGCCATAGCATAGAGAGGAGGGAGCAGGTCAGAGGTCCCAAGAAGCCCAAGGGGCACAGAGTCACTTCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR GCA 90 bp | TCCCAAATGACAGTGCTGGTCTGTCTCCCTTTGATTTTTCTATTCTaGTTTCTGGCCCCTGCTCACAGGTCTCAGAGCTCCAGACAAGGC | + |
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Preference number: 1 (lower is better) Translates to: SQMTVLVCLPLIFLF*FLAPAHRSQSSRQG Trigger: GCCTTGTCTGGAGCTCTGAGACCTGTGAGCAGGGGCCAGAAAGCAGAATAGAAAAATCAAAGGGAGACAGACCAGCACTGTCATTTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR CCA 90 bp | CAGCAGGGAGTCTCCGTGGGTCCCTGGGTTGAAAGAATTGGGTCATaGATAGAGGTGGCTGTTGCTTATACCTGTCTTTTCTTTCTCGCT | + |
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Preference number: 1 (lower is better) Translates to: QQGVSVGPWVERIGS*IEVAVAYTCLFFLA Trigger: AGCGAGAAAGAAAAGACAGGTATAAGCAACAGCCACCTCTATCCATGACCCAATTCTTTCAACCCAGGGACCCACGGAGACTCCCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| 3UTR CCA 90 bp | AGGGAAGTAGTTGCTACCAGCTGTGCTTGCCTTCTTGCACATGTCTaGCAGAAAGAAGGCGATTGCTCCAGGAAGAAACAAAAGGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: REVVATSCACLLAHV*QKEGDCSRKKQKGW Trigger: CCACCCCTTTTGTTTCTTCCTGGAGCAATCGCCTTCTTTCTGCCAGACATGTGCAAGAAGGCAAGCACAGCTGGTAGCAACTACTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR CCA 90 bp | TGCACTATCTGGATCTTCCCACCAGACTCCCAGGAGGGGGCAGTTTaGAGGTTCAAACCCCAGCTAATAGTAGGGAAACATGATAGTAGG | + |
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Preference number: 1 (lower is better) Translates to: CTIWIFPPDSQEGAV*RFKPQLIVGKHDSR Trigger: CCTACTATCATGTTTCCCTACTATTAGCTGGGGTTTGAACCTCCAAACTGCCCCCTCCTGGGAGTCTGGTGGGAAGATCCAGATAGTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR GCA 90 bp | TTTTGTGTCCCTGCCAAGGAGATGGAGTTGATCCGTGACCCCGGTTaGACTGCAAACTTGAGTTCTTTACTGAAGGGTACCAATGCATCC | + |
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Preference number: 1 (lower is better) Translates to: FCVPAKEMELIRDPG*TANLSSLLKGTNAS Trigger: GGATGCATTGGTACCCTTCAGTAAAGAACTCAAGTTTGCAGTGCAACCGGGGTCACGGATCAACTCCATCTCCTTGGCAGGGACACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| 3UTR CCA 90 bp | TGGTGGGAACATAGCTATGATGAGCATGTGTCCAACTCTAGTCTCTaGCTATCTAAGAACGGCTGCAGATTGATGGTCCTGCACCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: WWEHSYDEHVSNSSL*LSKNGCRLMVLHPR Trigger: TCTGGGGTGCAGGACCATCAATCTGCAGCCGTTCTTAGATAGCCAGAGACTAGAGTTGGACACATGCTCATCATAGCTATGTTCCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR TCA 90 bp | AGACCAGTCTTCTCGGGGAAGAACAATGTGGTGGCCTGTGAACACTaGCTAGACCTCAGGCTGCTTCAGGAAGCAGGAAGTAGAATTTTA | + |
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Preference number: 1 (lower is better) Translates to: RPVFSGKNNVVACEH*LDLRLLQEAGSRIL Trigger: TAAAATTCTACTTCCTGCTTCCTGAAGCAGCCTGAGGTCTAGTCAGTGTTCACAGGCCACCACATTGTTCTTCCCCGAGAAGACTGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR GCA 90 bp | CTTACACTGATGCATTCAGTTCCTGTGTGCCTCGGATGCGGAGGATaGTGGGAGAATAATTTATGGACCGTCATAGGGAATCTGATCGCT | + |
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Preference number: 1 (lower is better) Translates to: LTLMHSVPVCLGCGG*WENNLWTVIGNLIA Trigger: AGCGATCAGATTCCCTATGACGGTCCATAAATTATTCTCCCAGCATCCTCCGCATCCGAGGCACACAGGAACTGAATGCATCAGTGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR GCA 90 bp | TGGAAGAAGAGGCAAGAAGCTACTGATTGGAACAGTCTTTACCTGTaGTTCAGAGACACCCAGCTTCTAGGGCTCGAATCCCAGCCATTT | + |
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Preference number: 1 (lower is better) Translates to: WKKRQEATDWNSLYL*FRDTQLLGLESQPF Trigger: AAATGGCTGGGATTCGAGCCCTAGAAGCTGGGTGTCTCTGAAGCACAGGTAAAGACTGTTCCAATCAGTAGCTTCTTGCCTCTTCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR CCA 90 bp | GTCTCTCTCCCTGCTCTTAGATTTTTCAATCACTTTGAGAGTCAATaGCTGCAGGCTAGGAAGGATGCTCTCCTCAACATAGGTGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: VSLPALRFFNHFESQ*LQARKDALLNIGGL Trigger: CAGGCCACCTATGTTGAGGAGAGCATCCTTCCTAGCCTGCAGCCATTGACTCTCAAAGTGATTGAAAAATCTAAGAGCAGGGAGAGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR CCA 90 bp | ATCGCCATGGCTTTGCCTTGGACAACTAACTTCTTTCTGAATTTGTaGAAGAGAAATCAGACTGCCGGTGAGAAGTCACTGCAGGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: IAMALPWTTNFFLNL*KRNQTAGEKSLQGS Trigger: GGACCCCTGCAGTGACTTCTCACCGGCAGTCTGATTTCTCTTCCACAAATTCAGAAAGAAGTTAGTTGTCCAAGGCAAAGCCATGGCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR GCA 90 bp | ACCAGACTTCTTACACTGATGCATTCAGTTCCTGTGTGCCTCGGATaGGGAGGATGCTGGGAGAATAATTTATGGACCGTCATAGGGAAT | + |
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Preference number: 1 (lower is better) Translates to: TRLLTLMHSVPVCLG*GGCWENNLWTVIGN Trigger: ATTCCCTATGACGGTCCATAAATTATTCTCCCAGCATCCTCCGCATCCGAGGCACACAGGAACTGAATGCATCAGTGTAAGAAGTCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR GCA 90 bp | CAGGGAGTGGGGTTCTATGGTCCTCCTGGTCATAGAAACAGTATGTaGCAAAGTCGAGAAGATTCATCGGAGCTCATTTGTAGCATCTTC | + |
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Preference number: 1 (lower is better) Translates to: QGVGFYGPPGHRNSM*QSREDSSELICSIF Trigger: GAAGATGCTACAAATGAGCTCCGATGAATCTTCTCGACTTTGGCACATACTGTTTCTATGACCAGGAGGACCATAGAACCCCACTCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR CCA 90 bp | GTTCCTGTGTGCCTCGGATGCGGAGGATGCTGGGAGAATAATTTATaGACCGTCATAGGGAATCTGATCGCTTCTTTCATGTCTTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: VPVCLGCGGCWENNL*TVIGNLIASFMSFL Trigger: AAGGAAAGACATGAAAGAAGCGATCAGATTCCCTATGACGGTCCATAAATTATTCTCCCAGCATCCTCCGCATCCGAGGCACACAGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR CCA 90 bp | CATCTGACTGGAACATTCTGGAAGAAGAGGCAAGAAGCTACTGATTaGAACAGTCTTTACCTGTGCTTCAGAGACACCCAGCTTCTAGGG | + |
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Preference number: 1 (lower is better) Translates to: HLTGTFWKKRQEATD*NSLYLCFRDTQLLG Trigger: CCCTAGAAGCTGGGTGTCTCTGAAGCACAGGTAAAGACTGTTCCAATCAGTAGCTTCTTGCCTCTTCTTCCAGAATGTTCCAGTCAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR TCA 90 bp | TTGACATCTGACTGGAACATTCTGGAAGAAGAGGCAAGAAGCTACTaGTTGGAACAGTCTTTACCTGTGCTTCAGAGACACCCAGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: LTSDWNILEEEARSY*LEQSLPVLQRHPAS Trigger: AGAAGCTGGGTGTCTCTGAAGCACAGGTAAAGACTGTTCCAATCAGTAGCTTCTTGCCTCTTCTTCCAGAATGTTCCAGTCAGATGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR GCA 90 bp | CGCCACCTAGTCCTGTCAGTAGAGAACAGGCTTTTATCACATCTCTaGTTATTGCTGATGAAATCTGAACCATGCATCTTTTGGGATCCA | + |
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Preference number: 1 (lower is better) Translates to: RHLVLSVENRLLSHL*LLLMKSEPCIFWDP Trigger: TGGATCCCAAAAGATGCATGGTTCAGATTTCATCAGCAATAAGCAGAGATGTGATAAAAGCCTGTTCTCTACTGACAGGACTAGGTGGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR CCA 90 bp | AAAGCTGCATTCTCTGAAATATTCTCTCCCAGTGAGTCTACCTTCTaGAAAATTCTAGCCTCTGCCTCCTTCCATTTAGATAGCTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: KAAFSEIFSPSESTF*KILASASFHLDSSP Trigger: TGGGGAGCTATCTAAATGGAAGGAGGCAGAGGCTAGAATTTTCCAGAAGGTAGACTCACTGGGAGAGAATATTTCAGAGAATGCAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR CCA 90 bp | TTCAGAGTCGGAATGGCTTCTGTGAGCATCGCCATGGCTTTGCCTTaGACAACTAACTTCTTTCTGAATTTGTGGAAGAGAAATCAGACT | + |
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Preference number: 1 (lower is better) Translates to: FRVGMASVSIAMALP*TTNFFLNLWKRNQT Trigger: AGTCTGATTTCTCTTCCACAAATTCAGAAAGAAGTTAGTTGTCCAAGGCAAAGCCATGGCGATGCTCACAGAAGCCATTCCGACTCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR TCA 90 bp | AAACTTTCTCTTTCTCTGGTCCAAGGATGGAGAAAACATCCTGGATaGAAGCTGCATTCTCTGAAATATTCTCTCCCAGTGAGTCTACCT | + |
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Preference number: 1 (lower is better) Translates to: KLSLSLVQGWRKHPG*KLHSLKYSLPVSLP Trigger: AGGTAGACTCACTGGGAGAGAATATTTCAGAGAATGCAGCTTTCATCCAGGATGTTTTCTCCATCCTTGGACCAGAGAAAGAGAAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR CCA 90 bp | CTAAAAACTTTCTCTTTCTCTGGTCCAAGGATGGAGAAAACATCCTaGATGAAAGCTGCATTCTCTGAAATATTCTCTCCCAGTGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: LKTFSFSGPRMEKTS*MKAAFSEIFSPSES Trigger: AGACTCACTGGGAGAGAATATTTCAGAGAATGCAGCTTTCATCCAGGATGTTTTCTCCATCCTTGGACCAGAGAAAGAGAAAGTTTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR TCA 90 bp | CAAAAGAATATAAATGAGGTACAGTGGGAAATTAAGATGCATGATTaGCATCTGACTGGAACATTCTGGAAGAAGAGGCAAGAAGCTACT | + |
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Preference number: 1 (lower is better) Translates to: QKNINEVQWEIKMHD*HLTGTFWKKRQEAT Trigger: AGTAGCTTCTTGCCTCTTCTTCCAGAATGTTCCAGTCAGATGTCAATCATGCATCTTAATTTCCCACTGTACCTCATTTATATTCTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR-3UTR TCA 90 bp | CACCGTCTCCTAAGTCCAGTCACGGGCCAGGCAGCAAAGGCTGAGCTTCTGCCTGCTTCTTGGGACCTCTaGCCTGCTCCCTCCTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: HRLLSPVTGQAAKAELLPASWDL*PAPSSL Trigger: TAGAGAGGAGGGAGCAGGTCAGAGGTCCCAAGAAGC...AGGCAGAAGCTCAGCCTTTGCTGCCTGGCCCGTGACTGGACTTAGGAGACGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCAAGGAGATGGAGTTGATCCGTGACCCCGGTTGCACTGCAAACTTGAGTCATGCACATGCGCAGTaGGCTGGCAACGCGGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: PAKEMELIRDPGCTANLSHAHAQ*AGNAVW Trigger: CCACACCGCGTTGCCAGCTCACTGCGCATGTGCATG...ACTCAAGTTTGCAGTGCAACCGGGGTCACGGATCAACTCCATCTCCTTGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| 3UTR-3UTR TCA 90 bp | CCCCTTTTCTGTAGCAACCCAGAAGTCAACTTCAGCAGGGAGTCTCCGTGGGTCCATGCACATGCGCAGTaGGCTGGCAACGCGGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: PLFCSNPEVNFSRESPWVHAHAQ*AGNAVW Trigger: CCACACCGCGTTGCCAGCTCACTGCGCATGTGCATG...GACCCACGGAGACTCCCTGCTGAAGTTGACTTCTGGGTTGCTACAGAAAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| 3UTR-3UTR CCA 90 bp | CTGAGTCATCTCATGACTGGCCTGCCTCAGTCACCGTCTCCTAAGTCCAGTCACGCACCTCCGTGTGGCTaGAGGAAAGGGGAAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LSHLMTGLPQSPSPKSSHAPPCG*RKGEGK Trigger: CTTCCCTTCCCCTTTCCTCCAGCCACACGGAGGTGC...GTGACTGGACTTAGGAGACGGTGACTGAGGCAGGCCAGTCATGAGATGACTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR-3UTR CCA 90 bp | CACCGTCTCCTAAGTCCAGTCACGGGCCAGGCAGCAAAGGCTGAGCTTCTGCCTGACAATAGGGCTGCCTaGAAAAGAAGCCCAACACCC | + |
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Preference number: 2 (lower is better) Translates to: HRLLSPVTGQAAKAELLPDNRAA*KRSPTP Trigger: GGGTGTTGGGCTTCTTTTCCAGGCAGCCCTATTGTC...AGGCAGAAGCTCAGCCTTTGCTGCCTGGCCCGTGACTGGACTTAGGAGACGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR-3UTR TCA 90 bp | CCGAGAGTGCCCCAGCTCTACCGACAAGTGTCCTGTAGAAAAGGCGATAAAGAACATGCACATGCGCAGTaGGCTGGCAACGCGGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: PRVPQLYRQVSCRKGDKEHAHAQ*AGNAVW Trigger: CCACACCGCGTTGCCAGCTCACTGCGCATGTGCATG...TTCTTTATCGCCTTTTCTACAGGACACTTGTCGGTAGAGCTGGGGCACTCTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| 3UTR-3UTR CCA 90 bp | GCTTTCCCCCTCCATGCCTTGGTGGGAGGGGGTCTCCACTGGGTGGAGGAAGGAGAAAGAATTGGGTCATaGATAGAGGTGGCTGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: AFPLHALVGGGLHWVEEGERIGS*IEVAVA Trigger: AGCAACAGCCACCTCTATCCATGACCCAATTCTTTC...TCCTTCCTCCACCCAGTGGAGACCCCCTCCCACCAAGGCATGGAGGGGGAAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR CCA 90 bp | CCGAGAGTGCCCCAGCTCTACCGACAAGTGTCCTGTAGAAAAGGCGATAAAGAAGGAGGGGGTCTCCACTaGGTGGAGGAAGGAAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PRVPQLYRQVSCRKGDKEGGGLH*VEEGSQ Trigger: CTGGCTTCCTTCCTCCACCCAGTGGAGACCCCCTCC...TTCTTTATCGCCTTTTCTACAGGACACTTGTCGGTAGAGCTGGGGCACTCTCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAAGGCGATAAAGAACAGCAGGGACCGCAAGGAGCTGCACCCTGCTTAATGGGAGGGGGTCTCCACTaGGTGGAGGAAGGAAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RKGDKEQQGPQGAAPCLMGGGLH*VEEGSQ Trigger: CTGGCTTCCTTCCTCCACCCAGTGGAGACCCCCTCC...CATTAAGCAGGGTGCAGCTCCTTGCGGTCCCTGCTGTTCTTTATCGCCTTTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR GCA 90 bp | CTATGTATGGCTTTCCTTGAGCAAGAGGAAGCAGAACTTTCTGGACCCGTCAGCGGGAAGGCAGGCTGCTaGCCGGATGTTCCAGACTCC | + |
|
Preference number: 2 (lower is better) Translates to: LCMAFLEQEEAELSGPVSGKAGC*PDVPDS Trigger: GGAGTCTGGAACATCCGGGCAGCAGCCTGCCTTCCC...GCTGACGGGTCCAGAAAGTTCTGCTTCCTCTTGCTCAAGGAAAGCCATACATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CCA 90 bp | CCCTCCCACGTGAGACCTGTCTCGTGGTGTGATTTTGTCAGGACCCGCCACCTACAGATTCCAAGATGCTaGTGCGGGATGGACTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: PSHVRPVSWCDFVRTRHLQIPRC*CGMDFR Trigger: TCTGAAGTCCATCCCGCACCAGCATCTTGGAATCTG...TAGGTGGCGGGTCCTGACAAAATCACACCACGAGACAGGTCTCACGTGGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CCA 90 bp | CTGAGTCATCTCATGACTGGCCTGCCTCAGTCACCGTCTCCTAAGTCCAGTCACCGCGTAGAGGTGAACTaGAGGAAGACCCTATGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LSHLMTGLPQSPSPKSSHRVEVN*RKTLCG Trigger: TCCACATAGGGTCTTCCTCCAGTTCACCTCTACGCG...GTGACTGGACTTAGGAGACGGTGACTGAGGCAGGCCAGTCATGAGATGACTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CAA 90 bp | GCTCAAACAGACTCTGAGGTGAAATGGAGAAGAAGGGACAAAGACTaGGGGACCCTATTGCTGCTCCCTCCCTGCCTCTTGCTATGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: AQTDSEVKWRRRDKD*GTLLLLPPCLLLWW Trigger: CCACCATAGCAAGAGGCAGGGAGGGAGCAGCAATAGGGTCCCCAAGTCTTTGTCCCTTCTTCTCCATTTCACCTCAGAGTCTGTTTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGTCATCTCATGACTGGCCTGCCTCAGTCACCGTCTCCTAAGTCCAGTCACTGTGGAGACCTTGCGTaGTCCAAGTCTAAGAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LSHLMTGLPQSPSPKSSHCGDLA*SKSKKG Trigger: TCCCTTCTTAGACTTGGATCACGCAAGGTCTCCACA...GTGACTGGACTTAGGAGACGGTGACTGAGGCAGGCCAGTCATGAGATGACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CCA 90 bp | CCCCTTTTCTGTAGCAACCCAGAAGTCAACTTCAGCAGGGAGTCTCCGTGGGTCGGCCACCATGCTATCTaGATGGCTACTGGAATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: PLFCSNPEVNFSRESPWVGHHAI*MATGIP Trigger: TGGAATTCCAGTAGCCATCCAGATAGCATGGTGGCC...GACCCACGGAGACTCCCTGCTGAAGTTGACTTCTGGGTTGCTACAGAAAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CAA 90 bp | TGCAGGCAGGTAGGGCCTAGAGTGTTCTTTAAGTGTTCCCTCTGTTaGTGCCTTGGCAAACTCAGGGTAGATGCCATGGTTGCCTTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: CRQVGPRVFFKCSLC*CLGKLRVDAMVALA Trigger: TGCCAAGGCAACCATGGCATCTACCCTGAGTTTGCCAAGGCACAAACAGAGGGAACACTTAAAGAACACTCTAGGCCCTACCTGCCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CAA 90 bp | AGGGACAAAGACTTGGGGACCCTATTGCTGCTCCCTCCCTGCCTCTaGCTATGGTGGGAACATAGCTATGATGAGCATGTGTCCAACTCT | + |
|
Preference number: 2 (lower is better) Translates to: RDKDLGTLLLLPPCL*LWWEHSYDEHVSNS Trigger: AGAGTTGGACACATGCTCATCATAGCTATGTTCCCACCATAGCAAGAGGCAGGGAGGGAGCAGCAATAGGGTCCCCAAGTCTTTGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR TCA 90 bp | AGAAAAGGCGATAAAGAACAGCAGGGACCGCAAGGAGCTGCACCCTGCTTAATGGGAAGGAAGCCAGGGTaGGATGGAAAGTCCCCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: RKGDKEQQGPQGAAPCLMGRKPG*DGKSPF Trigger: AAAAGGGGACTTTCCATCTCACCCTGGCTTCCTTCC...CATTAAGCAGGGTGCAGCTCCTTGCGGTCCCTGCTGTTCTTTATCGCCTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR GCA 90 bp | CTGAGTCATCTCATGACTGGCCTGCCTCAGTCACCGTCTCCTAAGTCCAGTCACAGAGGGTGTCTCAGCTaGCTATGTATGGCTTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LSHLMTGLPQSPSPKSSHRGCLS*LCMAFL Trigger: AAGGAAAGCCATACATAGGCAGCTGAGACACCCTCT...GTGACTGGACTTAGGAGACGGTGACTGAGGCAGGCCAGTCATGAGATGACTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR TCA 90 bp | GAAGCCAGGGTGAGATGGAAAGTCCCCTTTTCTGTAGCAACCCAGAAGTCAACTCGTGGGTCCCTGGGTTaGAAGAATTGGGTCATGGAT | + |
|
Preference number: 2 (lower is better) Translates to: EARVRWKVPFSVATQKSTRGSLG*KNWVMD Trigger: ATCCATGACCCAATTCTTTCAACCCAGGGACCCACG...AGTTGACTTCTGGGTTGCTACAGAAAAGGGGACTTTCCATCTCACCCTGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR GCA 90 bp | CCGAGAGTGCCCCAGCTCTACCGACAAGTGTCCTGTAGAAAAGGCGATAAAGAAGCCCTTTTGTGTCCCTaGCAAGGAGATGGAGTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: PRVPQLYRQVSCRKGDKEALLCP*QGDGVD Trigger: ATCAACTCCATCTCCTTGGCAGGGACACAAAAGGGC...TTCTTTATCGCCTTTTCTACAGGACACTTGTCGGTAGAGCTGGGGCACTCTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR GCA 90 bp | AGAAAAGGCGATAAAGAACAGCAGGGACCGCAAGGAGCTGCACCCTGCTTAATGGCCCTTTTGTGTCCCTaGCAAGGAGATGGAGTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: RKGDKEQQGPQGAAPCLMALLCP*QGDGVD Trigger: ATCAACTCCATCTCCTTGGCAGGGACACAAAAGGGC...CATTAAGCAGGGTGCAGCTCCTTGCGGTCCCTGCTGTTCTTTATCGCCTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR CCA 90 bp | CCCTCCCACGTGAGACCTGTCTCGTGGTGTGATTTTGTCAGGACCCGCCACCTATATCTGGATGGCTACTaGAATTCCAAGACGAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: PSHVRPVSWCDFVRTRHLYLDGY*NSKTKR Trigger: TCTTTTCGTCTTGGAATTCCAGTAGCCATCCAGATA...TAGGTGGCGGGTCCTGACAAAATCACACCACGAGACAGGTCTCACGTGGGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CAA 90 bp | CCTCTGACCTGCTCCCTCCTCTCTATGCTATGGCTCAAACCTAGTTaGACTTGTGCTCTTGGTGAATATCCACACCCTACAGTGGGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: PLTCSLLSMLWLKPS*TCALGEYPHPTVGE Trigger: TTCTCCCACTGTAGGGTGTGGATATTCACCAAGAGCACAAGTCAAACTAGGTTTGAGCCATAGCATAGAGAGGAGGGAGCAGGTCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR GCA 90 bp | GCCAGGGTGAGATGGAAAGTCCCCTTTTCTGTAGCAACCCAGAAGTCAACTTCAGCCCTTTTGTGTCCCTaGCAAGGAGATGGAGTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: ARVRWKVPFSVATQKSTSALLCP*QGDGVD Trigger: ATCAACTCCATCTCCTTGGCAGGGACACAAAAGGGC...TGAAGTTGACTTCTGGGTTGCTACAGAAAAGGGGACTTTCCATCTCACCCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR CCA 90 bp | AAGATGGCAGGCTCAACATGTGTTTTTGCCTGCCCGGTGATATGGGGTGGTTTTGATGCTGGTGCGGGATaGACTTCAGAAACAGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: KMAGSTCVFACPVIWGGFDAGAG*TSETES Trigger: GCTTTCTGTTTCTGAAGTCCATCCCGCACCAGCATC...AAAACCACCCCATATCACCGGGCAGGCAAAAACACATGTTGAGCCTGCCATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCTAGGGCTCGAATCCCAGCCATTTGCATCTGTGCTTTGAGAATAAGCTTAGATGTGGAGCTGAGCTaGCAGCAAGAATGCGCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: ASRARIPAICICALRISLDVELS*QQECAS Trigger: ACTGGCGCATTCTTGCTGCCAGCTCAGCTCCACATC...TAAGCTTATTCTCAAAGCACAGATGCAAATGGCTGGGATTCGAGCCCTAGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CAA 90 bp | GCCAAGGAGATGGAGTTGATCCGTGACCCCGGTTGCACTGCAAACTaGAGTTCTTTACTGAAGGGTACCAATGCATCCATCCATAAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: AKEMELIRDPGCTAN*SSLLKGTNASIHKG Trigger: ACCTTTATGGATGGATGCATTGGTACCCTTCAGTAAAGAACTCAAGTTTGCAGTGCAACCGGGGTCACGGATCAACTCCATCTCCTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CAA 90 bp | AGCATCGCCATGGCTTTGCCTTGGACAACTAACTTCTTTCTGAATTaGTGGAAGAGAAATCAGACTGCCGGTGAGAAGTCACTGCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SIAMALPWTTNFFLN*WKRNQTAGEKSLQG Trigger: CCCCTGCAGTGACTTCTCACCGGCAGTCTGATTTCTCTTCCACAAATTCAGAAAGAAGTTAGTTGTCCAAGGCAAAGCCATGGCGATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR TCA 90 bp | AAGATGGCAGGCTCAACATGTGTTTTTGCCTGCCCGGTGATATGGGGTGGTTTTGGCTCAAACCTAGTTTaGCTTGTGCTCTTGGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: KMAGSTCVFACPVIWGGFGSNLV*LVLLVN Trigger: ATTCACCAAGAGCACAAGTCAAACTAGGTTTGAGCC...AAAACCACCCCATATCACCGGGCAGGCAAAAACACATGTTGAGCCTGCCATCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGCCAGGGTGAGATGGAAAGTCCCCTTTTCTGTAGCAACCCAGAAGTCAACTATCTGGATGGCTACTaGAATTCCAAGACGAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: GSQGEMESPLFCSNPEVNYLDGY*NSKTKR Trigger: TCTTTTCGTCTTGGAATTCCAGTAGCCATCCAGATA...GTTGACTTCTGGGTTGCTACAGAAAAGGGGACTTTCCATCTCACCCTGGCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CAA 90 bp | CTCTGTTTGTGCCTTGGCAAACTCAGGGTAGATGCCATGGTTGCCTaGGCAACATCTTATAGATCTCATATGGAACTTGCACATCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LCLCLGKLRVDAMVA*ATSYRSHMELAHLL Trigger: CAGAAGATGTGCAAGTTCCATATGAGATCTATAAGATGTTGCCAAGGCAACCATGGCATCTACCCTGAGTTTGCCAAGGCACAAACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR TCA 90 bp | CTATGTATGGCTTTCCTTGAGCAAGAGGAAGCAGAACTTTCTGGACCCGTCAGCATTGCTGATGAAATCTaGACCATGCATCTTTTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LCMAFLEQEEAELSGPVSIADEI*TMHLLG Trigger: TCCCAAAAGATGCATGGTTCAGATTTCATCAGCAAT...GCTGACGGGTCCAGAAAGTTCTGCTTCCTCTTGCTCAAGGAAAGCCATACATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR GCA 90 bp | AAGATGGCAGGCTCAACATGTGTTTTTGCCTGCCCGGTGATATGGGGTGGTTTTGATAGAGGTGGCTGTTaGTTATACCTGTCTTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: KMAGSTCVFACPVIWGGFDRGGC*LYLSFL Trigger: AAGAAAAGACAGGTATAAGCAACAGCCACCTCTATC...AAAACCACCCCATATCACCGGGCAGGCAAAAACACATGTTGAGCCTGCCATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR GCA 90 bp | ATGTTAAGGTACAGAGGTCTGTTTTTGTGCAACTGGGGGAAAGAAACTGCTTTTGTTGTTCAGGATGGATaGTTCCCAGGGAGTGGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: MLRYRGLFLCNWGKETAFVVQDG*FPGSGV Trigger: AACCCCACTCCCTGGGAAGCATCCATCCTGAACAAC...AAAAGCAGTTTCTTTCCCCCAGTTGCACAAAAACAGACCTCTGTACCTTAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CCA 90 bp | TTCAAGCTTCTAGGTCTCCTTTTCTTAGCTGGGGAAAGGCTTGCTAATAAAGTCGATGCTGGTGCGGGATaGACTTCAGAAACAGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: FKLLGLLFLAGERLANKVDAGAG*TSETES Trigger: GCTTTCTGTTTCTGAAGTCCATCCCGCACCAGCATC...GACTTTATTAGCAAGCCTTTCCCCAGCTAAGAAAAGGAGACCTAGAAGCTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CAA 90 bp | CTAGTCCTGTCAGTAGAGAACAGGCTTTTATCACATCTCTGCTTATaGCTGATGAAATCTGAACCATGCATCTTTTGGGATCCACCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LVLSVENRLLSHLCL*LMKSEPCIFWDPPP Trigger: AGGAGGTGGATCCCAAAAGATGCATGGTTCAGATTTCATCAGCAATAAGCAGAGATGTGATAAAAGCCTGTTCTCTACTGACAGGACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR TCA 90 bp | GCTTCTAGGGCTCGAATCCCAGCCATTTGCATCTGTGCTTTGAGAATAAGCTTATGTTTGGATAACTTCTaGCAGCATATAATGCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: ASRARIPAICICALRISLCLDNF*QHIMHW Trigger: CCAGTGCATTATATGCTGTCAGAAGTTATCCAAACA...TAAGCTTATTCTCAAAGCACAGATGCAAATGGCTGGGATTCGAGCCCTAGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR GCA 90 bp | GACCCAGATATTCAGCCCCAATGTAAGTGTTCTGGGATCAGAACACTGATCAAGATCCTTCCATATTTCTaGTTCAAGCTTCTAGGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: DPDIQPQCKCSGIRTLIKILPYF*FKLLGL Trigger: GAGACCTAGAAGCTTGAAGCAGAAATATGGAAGGAT...CTTGATCAGTGTTCTGATCCCAGAACACTTACATTGGGGCTGAATATCTGGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CCA 90 bp | CTATGTATGGCTTTCCTTGAGCAAGAGGAAGCAGAACTTTCTGGACCCGTCAGCAAGAAACAAAAGGGGTaGAACATTGTGAAGTGTATT | + |
|
Preference number: 2 (lower is better) Translates to: LCMAFLEQEEAELSGPVSKKQKG*NIVKCI Trigger: AATACACTTCACAATGTTCCACCCCTTTTGTTTCTT...GCTGACGGGTCCAGAAAGTTCTGCTTCCTCTTGCTCAAGGAAAGCCATACATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR TCA 90 bp | GCTTCTAGGGCTCGAATCCCAGCCATTTGCATCTGTGCTTTGAGAATAAGCTTACACATTGGGTTGAATTaGCCATTCCTTGTAGTATTT | + |
|
Preference number: 2 (lower is better) Translates to: ASRARIPAICICALRISLHIGLN*PFLVVF Trigger: AAATACTACAAGGAATGGTCAATTCAACCCAATGTG...TAAGCTTATTCTCAAAGCACAGATGCAAATGGCTGGGATTCGAGCCCTAGAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR GCA 90 bp | AGAATAGCATCACGCGTGGAAAAGTCTCTTGTCTGTCTACGTGTCTGGGTTATAGATAGAGGTGGCTGTTaGTTATACCTGTCTTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: RIASRVEKSLVCLRVWVIDRGGC*LYLSFL Trigger: AAGAAAAGACAGGTATAAGCAACAGCCACCTCTATC...TATAACCCAGACACGTAGACAGACAAGAGACTTTTCCACGCGTGATGCTATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGAGGCCACCATGCTATCTGGATGGCTACTGGAATTCCAAGACGAAAAGAAATAATTGAGAACTCCTaGCTATTTATTGCATTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LRGHHAIWMATGIPRRKEIIENS*LFIALG Trigger: TCCCAATGCAATAAATAGCCAGGAGTTCTCAATTAT...TTCTTTTCGTCTTGGAATTCCAGTAGCCATCCAGATAGCATGGTGGCCTCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR CCA 90 bp | TTGCCTTGGCAACATCTTATAGATCTCATATGGAACTTGCACATCTTCTGGAAGGAAAGAATTGGGTCATaGATAGAGGTGGCTGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LPWQHLIDLIWNLHIFWKERIGS*IEVAVA Trigger: AGCAACAGCCACCTCTATCCATGACCCAATTCTTTC...CTTCCAGAAGATGTGCAAGTTCCATATGAGATCTATAAGATGTTGCCAAGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR GCA 90 bp | TTGCCTTGGCAACATCTTATAGATCTCATATGGAACTTGCACATCTTCTGGAAGGATATTGGGAGATGGTaGTCACACCCTTGTAGATTT | + |
|
Preference number: 2 (lower is better) Translates to: LPWQHLIDLIWNLHIFWKDIGRW*SHPCRF Trigger: AAATCTACAAGGGTGTGAGCACCATCTCCCAATATC...CTTCCAGAAGATGTGCAAGTTCCATATGAGATCTATAAGATGTTGCCAAGGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CCA 90 bp | TTCAAGCTTCTAGGTCTCCTTTTCTTAGCTGGGGAAAGGCTTGCTAATAAAGTCATAATTGAGAACTCCTaGCTATTTATTGCATTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: FKLLGLLFLAGERLANKVIIENS*LFIALG Trigger: TCCCAATGCAATAAATAGCCAGGAGTTCTCAATTAT...GACTTTATTAGCAAGCCTTTCCCCAGCTAAGAAAAGGAGACCTAGAAGCTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | GAACAGAGTCTGCCCGCGGGGCATGCACATGCGCAGTaGGCTGGCAACGCGGTGTGGCTGGTGGAAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EQSLPAGHAHAQ*AGNAVWLVEGC Trigger: GCAGCCTTCCACCAGCCACACCGCGTTGCCAGCTCACTGCGCATGTGCATGCCCCGCGGGCAGACTCTGTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | CCGCTGCTTTCCGGTCCTTTAAAGGCCTGCACTATCTaGATCTTCCCACCAGACTCCCAGGAGGGGGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PLLSGPLKACTI*IFPPDSQEGAV Trigger: AACTGCCCCCTCCTGGGAGTCTGGTGGGAAGATCCAGATAGTGCAGGCCTTTAAAGGACCGGAAAGCAGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | GCATCCATCCATAAAGGTCCAGATCTCCCGTGTGAATaGACAGAGTCTGCCCGCGGGGCATGCACATGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: ASIHKGPDLPCE*TESARGACTCA Trigger: TGCGCATGTGCATGCCCCGCGGGCAGACTCTGTTCATTCACACGGGAGATCTGGACCTTTATGGATGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | GGTTTGCAAAGGGCACCGGAAGAAGGGAAGGCAGGCTaGTGCCCGGATGTTCCAGACTCCAGGCAGTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: GLQRAPEEGKAG*CPDVPDSRQFY Trigger: ATAAAACTGCCTGGAGTCTGGAACATCCGGGCAGCAGCCTGCCTTCCCTTCTTCCGGTGCCCTTTGCAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | CCGAGAGTGCCCCAGCTCTACCGACAAGTGTCCTGTAGAAAAGGCGATAAAGAAGCCAAGGAGATGGAGTaGATCCGTGACCCCGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PRVPQLYRQVSCRKGDKEAKEME*IRDPGC Trigger: GCAACCGGGGTCACGGATCAACTCCATCTCCTTGGC...TTCTTTATCGCCTTTTCTACAGGACACTTGTCGGTAGAGCTGGGGCACTCTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | ACTCTGTGCCCCTTGGGCTTCTTGGGACCTCTGACCTaGTCCCTCCTCTCTATGCTATGGCTCAAACCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: TLCPLGFLGPLT*SLLSMLWLKPS Trigger: ACTAGGTTTGAGCCATAGCATAGAGAGGAGGGAGCAGGTCAGAGGTCCCAAGAAGCCCAAGGGGCACAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | TTGCAAAGGGCACCGGAAGAAGGGAAGGCAGGCTGCTaGCCGGATGTTCCAGACTCCAGGCAGTTTTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: LQRAPEEGKAGC*PDVPDSRQFYE Trigger: TTCATAAAACTGCCTGGAGTCTGGAACATCCGGGCAGCAGCCTGCCTTCCCTTCTTCCGGTGCCCTTTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | GCATGGTATCCGCTGCTTTCCGGTCCTTTAAAGGCCTaGACTATCTGGATCTTCCCACCAGACTCCCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: AWYPLLSGPLKA*TIWIFPPDSQE Trigger: CTCCTGGGAGTCTGGTGGGAAGATCCAGATAGTGCAGGCCTTTAAAGGACCGGAAAGCAGCGGATACCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | AAAACCTACCCAGCAGAATGTAGAGAGCAAAGCTGCTaGCACCTCCGTGTGGCTGGAGGAAAGGGGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KTYPAECREQSC*HLRVAGGKGKG Trigger: TCCCTTCCCCTTTCCTCCAGCCACACGGAGGTGCCAGCAGCTTTGCTCTCTACATTCTGCTGGGTAGGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | CCTCCCATGGACTGGGACTGCAGGTGTATGCCACCATaGCTGGCTCAAACAGACTCTGAGGTGAAATGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PPMDWDCRCMPP*LAQTDSEVKWR Trigger: TCTCCATTTCACCTCAGAGTCTGTTTGAGCCAGCCATGGTGGCATACACCTGCAGTCCCAGTCCATGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTCCCCCTCCATGCCTTGGTGGGAGGGGGTCTCCACTGGGTGGAGGAAGGAACTCCTGGCTATTTATaGCATTGGGAAACAAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: AFPLHALVGGGLHWVEEGTPGYL*HWETKP Trigger: TGGTTTTGTTTCCCAATGCAATAAATAGCCAGGAGT...TCCTTCCTCCACCCAGTGGAGACCCCCTCCCACCAAGGCATGGAGGGGGAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | GTATCTGTCATTCATGGAGGTCTGGGGATGTGGAGCTaGGCTGGCAGCAAGAATGCGCCAGTCACTGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: VSVIHGGLGMWS*AGSKNAPVTES Trigger: TGACTCAGTGACTGGCGCATTCTTGCTGCCAGCTCAGCTCCACATCCCCAGACCTCCATGAATGACAGATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | ACCAGTCTTCTCGGGGAAGAACAATGTGGTGGCCTGTaGACACTGACTAGACCTCAGGCTGCTTCAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TSLLGEEQCGGL*TLTRPQAASGS Trigger: GCTTCCTGAAGCAGCCTGAGGTCTAGTCAGTGTTCACAGGCCACCACATTGTTCTTCCCCGAGAAGACTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | GGCAGGACCAGACCTTCAGAGTCGGAATGGCTTCTGTaGGCATCGCCATGGCTTTGCCTTGGACAACTAACT | + |
|
Preference number: 3 (lower is better) Translates to: GRTRPSESEWLL*ASPWLCLGQLT Trigger: AGTTAGTTGTCCAAGGCAAAGCCATGGCGATGCTCACAGAAGCCATTCCGACTCTGAAGGTCTGGTCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | GAAAGCTGGGAGCCAGGCTCTCTGCAGATTCCAAGATaGTGGTGCGGGATGGACTTCAGAAACAGAAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ESWEPGSLQIPR*WCGMDFRNRKP Trigger: TGGCTTTCTGTTTCTGAAGTCCATCCCGCACCAGCATCTTGGAATCTGCAGAGAGCCTGGCTCCCAGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTTTTCTGTAGCAACCCAGAAGTCAACTTCAGCAGGGAGTCTCCGTGGGTCTTGAAGACAGCCCTTTaGTGTCCCTGCCAAGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PLFCSNPEVNFSRESPWVLKTAL*CPCQGD Trigger: ATCTCCTTGGCAGGGACACAAAAGGGCTGTCTTCAA...GACCCACGGAGACTCCCTGCTGAAGTTGACTTCTGGGTTGCTACAGAAAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | GTATGCCACCATGGCTGGCTCAAACAGACTCTGAGGTaGAATGGAGAAGAAGGGACAAAGACTTGGGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: VCHHGWLKQTLR*NGEEGTKTWGP Trigger: GGGTCCCCAAGTCTTTGTCCCTTCTTCTCCATTTCACCTCAGAGTCTGTTTGAGCCAGCCATGGTGGCATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | TTCTCGGGGAAGAACAATGTGGTGGCCTGTGAACACTaGCTAGACCTCAGGCTGCTTCAGGAAGCAGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: FSGKNNVVACEH*LDLRLLQEAGS Trigger: ACTTCCTGCTTCCTGAAGCAGCCTGAGGTCTAGTCAGTGTTCACAGGCCACCACATTGTTCTTCCCCGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | CCTGCCAAGGAGATGGAGTTGATCCGTGACCCCGGTTaGACTGCAAACTTGAGTTCTTTACTGAAGGGTACC | + |
|
Preference number: 3 (lower is better) Translates to: PAKEMELIRDPG*TANLSSLLKGT Trigger: GGTACCCTTCAGTAAAGAACTCAAGTTTGCAGTGCAACCGGGGTCACGGATCAACTCCATCTCCTTGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | ATAAAAACCTACCCAGCAGAATGTAGAGAGCAAAGCTaGTGGCACCTCCGTGTGGCTGGAGGAAAGGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: IKTYPAECREQS*WHLRVAGGKGK Trigger: CTTCCCCTTTCCTCCAGCCACACGGAGGTGCCAGCAGCTTTGCTCTCTACATTCTGCTGGGTAGGTTTTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | AGAAGTCAACTTCAGCAGGGAGTCTCCGTGGGTCCCTaGGTTGAAAGAATTGGGTCATGGATAGAGGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RSQLQQGVSVGP*VERIGSWIEVA Trigger: AGCCACCTCTATCCATGACCCAATTCTTTCAACCCAGGGACCCACGGAGACTCCCTGCTGAAGTTGACTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | AAATTGCTGTCCTGGTATCTGTCATTCATGGAGGTCTaGGGATGTGGAGCTGAGCTGGCAGCAAGAATGCGC | + |
|
Preference number: 3 (lower is better) Translates to: KLLSWYLSFMEV*GCGAELAARMR Trigger: GCGCATTCTTGCTGCCAGCTCAGCTCCACATCCCCAGACCTCCATGAATGACAGATACCAGGACAGCAATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | GTTAACAGTTCCAGTATAGGGACTCAGTCTACATCCAGGGCAGTGAGGGAACGGTTGAAGACAGCCCTTTaGTGTCCCTGCCAAGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VNSSSIGTQSTSRAVRERLKTAL*CPCQGD Trigger: ATCTCCTTGGCAGGGACACAAAAGGGCTGTCTTCAA...CCGTTCCCTCACTGCCCTGGATGTAGACTGAGTCCCTATACTGGAACTGTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCCCACGTGAGACCTGTCTCGTGGTGTGATTTTGTCAGGACCCGCCACCTAAAAACCATGAAAGCATaGAAGACAGCCCTTTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PSHVRPVSWCDFVRTRHLKTMKA*KTALLC Trigger: ACACAAAAGGGCTGTCTTCAATGCTTTCATGGTTTT...TAGGTGGCGGGTCCTGACAAAATCACACCACGAGACAGGTCTCACGTGGGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | GTGAACTGGAGGAAGACCCTATGTGGAGACCTTGCGTaGTCCAAGTCTAAGAAGGGAGTACGTAAGGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VNWRKTLCGDLA*SKSKKGVRKEG Trigger: TCCCTCCTTACGTACTCCCTTCTTAGACTTGGATCACGCAAGGTCTCCACATAGGGTCTTCCTCCAGTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | CAGGTGTATGCCACCATGGCTGGCTCAAACAGACTCTaGGGTGAAATGGAGAAGAAGGGACAAAGACTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QVYATMAGSNRL*GEMEKKGQRLG Trigger: CCCAAGTCTTTGTCCCTTCTTCTCCATTTCACCTCAGAGTCTGTTTGAGCCAGCCATGGTGGCATACACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | ACAGTGCTGGTCTGTCTCCCTTTGATTTTTCTATTCTaGTTTCTGGCCCCTGCTCACAGGTCTCAGAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TVLVCLPLIFLF*FLAPAHRSQSS Trigger: GGAGCTCTGAGACCTGTGAGCAGGGGCCAGAAAGCAGAATAGAAAAATCAAAGGGAGACAGACCAGCACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | GGTACTAACCTCCTATTGGCATCCACAGAGCTGTGCTaGGAATATGTTGATAGGCAGTGCCTGACAGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GTNLLLASTELC*EYVDRQCLTGH Trigger: ATGCCCTGTCAGGCACTGCCTATCAACATATTCCCAGCACAGCTCTGTGGATGCCAATAGGAGGTTAGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTTCCATATTTCTGCTTCAAGCTTCTAGGTCTCCTTTTCTTAGCTGGGGAAGCCAAGGAGATGGAGTaGATCCGTGACCCCGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: ILPYFCFKLLGLLFLAGEAKEME*IRDPGC Trigger: GCAACCGGGGTCACGGATCAACTCCATCTCCTTGGC...TTCCCCAGCTAAGAAAAGGAGACCTAGAAGCTTGAAGCAGAAATATGGAAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCTAGGGCTCGAATCCCAGCCATTTGCATCTGTGCTTTGAGAATAAGCTTACCCGTCTCTGTGAACTaGTACCAGAGGCTGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ASRARIPAICICALRISLPVSVN*YQRLRE Trigger: CTCTCTCAGCCTCTGGTACAAGTTCACAGAGACGGG...TAAGCTTATTCTCAAAGCACAGATGCAAATGGCTGGGATTCGAGCCCTAGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | CTTTTGTGTCCCTGCCAAGGAGATGGAGTTGATCCGTaGCCCCGGTTGCACTGCAAACTTGAGTTCTTTACT | + |
|
Preference number: 3 (lower is better) Translates to: LLCPCQGDGVDP*PRLHCKLEFFT Trigger: AGTAAAGAACTCAAGTTTGCAGTGCAACCGGGGTCACGGATCAACTCCATCTCCTTGGCAGGGACACAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | AGTCTAAAGGACACCACTAGACCAGACTTCTTACACTaGTGCATTCAGTTCCTGTGTGCCTCGGATGCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLKDTTRPDFLH*CIQFLCASDAE Trigger: CTCCGCATCCGAGGCACACAGGAACTGAATGCATCAGTGTAAGAAGTCTGGTCTAGTGGTGTCCTTTAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | CTGCCCTTGAACTTGCTCCACAGTCCAGGCAGATGTTaGACTTTAATGCTTCTGCCTCAGTTTGCCAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LPLNLLHSPGRC*TLMLLPQFAKC Trigger: GCACTTGGCAAACTGAGGCAGAAGCATTAAAGTTCAACATCTGCCTGGACTGTGGAGCAAGTTCAAGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | CTTTCTGAATTTGTGGAAGAGAAATCAGACTGCCGGTaGGAAGTCACTGCAGGGGTCCCTAAGGATTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LSEFVEEKSDCR*EVTAGVPKDSP Trigger: TGGGGAATCCTTAGGGACCCCTGCAGTGACTTCTCACCGGCAGTCTGATTTCTCTTCCACAAATTCAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | CTTACACTGATGCATTCAGTTCCTGTGTGCCTCGGATaGGGAGGATGCTGGGAGAATAATTTATGGACCGTC | + |
|
Preference number: 3 (lower is better) Translates to: LTLMHSVPVCLG*GGCWENNLWTV Trigger: GACGGTCCATAAATTATTCTCCCAGCATCCTCCGCATCCGAGGCACACAGGAACTGAATGCATCAGTGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | GTCTCCGTGGGTCCCTGGGTTGAAAGAATTGGGTCATaGATAGAGGTGGCTGTTGCTTATACCTGTCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VSVGPWVERIGS*IEVAVAYTCLF Trigger: GAAAAGACAGGTATAAGCAACAGCCACCTCTATCCATGACCCAATTCTTTCAACCCAGGGACCCACGGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | GTTGCTACCAGCTGTGCTTGCCTTCTTGCACATGTCTaGCAGAAAGAAGGCGATTGCTCCAGGAAGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: VATSCACLLAHV*QKEGDCSRKKQ Trigger: TTGTTTCTTCCTGGAGCAATCGCCTTCTTTCTGCCAGACATGTGCAAGAAGGCAAGCACAGCTGGTAGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | AATTCTTGGAGGTTAATTTCCCATCTCAGCAGGAGATaGATTCTGGGAGTCATAGTGCAGGCAGGTAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: NSWRLISHLSRR*ILGVIVQAGRA Trigger: GGCCCTACCTGCCTGCACTATGACTCCCAGAATCCATCTCCTGCTGAGATGGGAAATTAACCTCCAAGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAAGGCGATAAAGAACAGCAGGGACCGCAAGGAGCTGCACCCTGCTTAATGGGTTGCACTGCAAACTaGAGTTCTTTACTGAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RKGDKEQQGPQGAAPCLMGCTAN*SSLLKG Trigger: ACCCTTCAGTAAAGAACTCAAGTTTGCAGTGCAACC...CATTAAGCAGGGTGCAGCTCCTTGCGGTCCCTGCTGTTCTTTATCGCCTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | GCCATGGAAACCAACCGAGAGTGCCCCAGCTCTACCGACAAGTGTCCTGTAGAAACTCCTGGCTATTTATaGCATTGGGAAACAAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: AMETNRECPSSTDKCPVETPGYL*HWETKP Trigger: TGGTTTTGTTTCCCAATGCAATAAATAGCCAGGAGT...TTCTACAGGACACTTGTCGGTAGAGCTGGGGCACTCTCGGTTGGTTTCCATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | CTATGTATGGCTTTCCTTGAGCAAGAGGAAGCAGAACTTTCTGGACCCGTCAGCTCCAGAGTAAGCAATTaGGGGAGAATAGCATCACGC | + |
|
Preference number: 3 (lower is better) Translates to: LCMAFLEQEEAELSGPVSSRVSN*GRIASR Trigger: GCGTGATGCTATTCTCCCCAAATTGCTTACTCTGGA...GCTGACGGGTCCAGAAAGTTCTGCTTCCTCTTGCTCAAGGAAAGCCATACATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | GCTCCCTCCTCTCTATGCTATGGCTCAAACCTAGTTTaGCTTGTGCTCTTGGTGAATATCCACACCCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: APSSLCYGSNLV*LVLLVNIHTLQ Trigger: CTGTAGGGTGTGGATATTCACCAAGAGCACAAGTCAAACTAGGTTTGAGCCATAGCATAGAGAGGAGGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | ATGCATTCAGTTCCTGTGTGCCTCGGATGCGGAGGATaGTGGGAGAATAATTTATGGACCGTCATAGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: MHSVPVCLGCGG*WENNLWTVIGN Trigger: ATTCCCTATGACGGTCCATAAATTATTCTCCCAGCATCCTCCGCATCCGAGGCACACAGGAACTGAATGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | TATCCATCACCCAGAACGTTCCACAATCACTGTGCCTaGCCAAGAACTCATGAGCACCATAGTTCACCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: YPSPRTFHNHCA*PRTHEHHSSPL Trigger: AAGAGGTGAACTATGGTGCTCATGAGTTCTTGGGCAGGCACAGTGATTGTGGAACGTTCTGGGTGATGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | TCCACAGAGCTGTGCTGGGAATATGTTGATAGGCAGTaGCTGACAGGGCATCCCTTGGACATTCTTAAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: STELCWEYVDRQ*LTGHPLDILKV Trigger: TACTTTAAGAATGTCCAAGGGATGCCCTGTCAGGCACTGCCTATCAACATATTCCCAGCACAGCTCTGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | TGCCTCGGATGCGGAGGATGCTGGGAGAATAATTTATaGACCGTCATAGGGAATCTGATCGCTTCTTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: CLGCGGCWENNL*TVIGNLIASFM Trigger: CATGAAAGAAGCGATCAGATTCCCTATGACGGTCCATAAATTATTCTCCCAGCATCCTCCGCATCCGAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | TCAGCTTGTCTTTCTGTCCCAGGTAAATTGCTGTCCTaGTATCTGTCATTCATGGAGGTCTGGGGATGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SACLSVPGKLLS*YLSFMEVWGCG Trigger: TCCACATCCCCAGACCTCCATGAATGACAGATACCAGGACAGCAATTTACCTGGGACAGAAAGACAAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAAGCCAGGGTGAGATGGAAAGTCCCCTTTTCTGTAGCAACCCAGAAGTCAGGTTGCACTGCAAACTaGAGTTCTTTACTGAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: KEARVRWKVPFSVATQKSGCTAN*SSLLKG Trigger: ACCCTTCAGTAAAGAACTCAAGTTTGCAGTGCAACC...TGACTTCTGGGTTGCTACAGAAAAGGGGACTTTCCATCTCACCCTGGCTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTGCTTATACCTGTCTTTTCTTTCTCGCTCTCAGAGGCCACCATGCTATCTTTGAAGACAGCCCTTTaGTGTCCCTGCCAAGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LLLIPVFSFSLSEATMLSLKTAL*CPCQGD Trigger: ATCTCCTTGGCAGGGACACAAAAGGGCTGTCTTCAA...AGATAGCATGGTGGCCTCTGAGAGCGAGAAAGAAAAGACAGGTATAAGCAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | TACCTGTCTTTTCTTTCTCGCTCTCAGAGGCCACCATaGTATCTGGATGGCTACTGGAATTCCAAGACGAAA | + |
|
Preference number: 3 (lower is better) Translates to: YLSFLSRSQRPP*YLDGYWNSKTK Trigger: TTTCGTCTTGGAATTCCAGTAGCCATCCAGATAGCATGGTGGCCTCTGAGAGCGAGAAAGAAAAGACAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | CGCTCTCAGAGGCCACCATGCTATCTGGATGGCTACTaGAATTCCAAGACGAAAAGAAAGCAGTATTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RSQRPPCYLDGY*NSKTKRKQYFS Trigger: GGAAAAATACTGCTTTCTTTTCGTCTTGGAATTCCAGTAGCCATCCAGATAGCATGGTGGCCTCTGAGAGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | TCTTTCTCGCTCTCAGAGGCCACCATGCTATCTGGATaGCTACTGGAATTCCAAGACGAAAAGAAAGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SFSLSEATMLSG*LLEFQDEKKAV Trigger: TACTGCTTTCTTTTCGTCTTGGAATTCCAGTAGCCATCCAGATAGCATGGTGGCCTCTGAGAGCGAGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | CTTTTCTTTCTCGCTCTCAGAGGCCACCATGCTATCTaGATGGCTACTGGAATTCCAAGACGAAAAGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LFFLALRGHHAI*MATGIPRRKES Trigger: GCTTTCTTTTCGTCTTGGAATTCCAGTAGCCATCCAGATAGCATGGTGGCCTCTGAGAGCGAGAAAGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | CATAGCTATGATGAGCATGTGTCCAACTCTAGTCTCTaGCTATCTAAGAACGGCTGCAGATTGATGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: HSYDEHVSNSSL*LSKNGCRLMVL Trigger: CAGGACCATCAATCTGCAGCCGTTCTTAGATAGCCAGAGACTAGAGTTGGACACATGCTCATCATAGCTATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | GGAACATTCTGGAAGAAGAGGCAAGAAGCTACTGATTaGAACAGTCTTTACCTGTGCTTCAGAGACACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GTFWKKRQEATD*NSLYLCFRDTQ Trigger: CTGGGTGTCTCTGAAGCACAGGTAAAGACTGTTCCAATCAGTAGCTTCTTGCCTCTTCTTCCAGAATGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTGCTTATACCTGTCTTTTCTTTCTCGCTCTCAGAGGCCACCATGCTATCTGGTTGCACTGCAAACTaGAGTTCTTTACTGAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LLLIPVFSFSLSEATMLSGCTAN*SSLLKG Trigger: ACCCTTCAGTAAAGAACTCAAGTTTGCAGTGCAACC...AGATAGCATGGTGGCCTCTGAGAGCGAGAAAGAAAAGACAGGTATAAGCAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGGGTGAGATGGAAAGTCCCCTTTTCTGTAGCAACCCAGAAGTCAACTTCAAAAACCATGAAAGCATaGAAGACAGCCCTTTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: ARVRWKVPFSVATQKSTSKTMKA*KTALLC Trigger: ACACAAAAGGGCTGTCTTCAATGCTTTCATGGTTTT...TGAAGTTGACTTCTGGGTTGCTACAGAAAAGGGGACTTTCCATCTCACCCTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAAGCCAGGGTGAGATGGAAAGTCCCCTTTTCTGTAGCAACCCAGAAGTCAACTCCTGGCTATTTATaGCATTGGGAAACAAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: KEARVRWKVPFSVATQKSTPGYL*HWETKP Trigger: TGGTTTTGTTTCCCAATGCAATAAATAGCCAGGAGT...TGACTTCTGGGTTGCTACAGAAAAGGGGACTTTCCATCTCACCCTGGCTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTAAGGTACAGAGGTCTGTTTTTGTGCAACTGGGGGAAAGAAACTGCTTTTGCAATAAGGGCAGGTTaGCAAAGGGCACCGGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: MLRYRGLFLCNWGKETAFAIRAG*QRAPEE Trigger: TTCTTCCGGTGCCCTTTGCAAACCTGCCCTTATTGC...AAAAGCAGTTTCTTTCCCCCAGTTGCACAAAAACAGACCTCTGTACCTTAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | TTAGCACTTTCCACAAAGAGTGAAACCAAGGGCACATaGGGAAACAGTTCCACATACAACATGCAGCTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LALSTKSETKGT*GNSSTYNMQLG Trigger: GCCTAGCTGCATGTTGTATGTGGAACTGTTTCCTCATGTGCCCTTGGTTTCACTCTTTGTGGAAAGTGCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | ATAGGCATGCCCCACTACTCCTGTTTGGATAACTTCTaGCAGCATATAATGCACTGGTTCGGAAGCCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: IGMPHYSCLDNF*QHIMHWFGSQD Trigger: ATCTTGGCTTCCGAACCAGTGCATTATATGCTGTCAGAAGTTATCCAAACAGGAGTAGTGGGGCATGCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | TCGCCATGGCTTTGCCTTGGACAACTAACTTCTTTCTaGATTTGTGGAAGAGAAATCAGACTGCCGGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SPWLCLGQLTSF*ICGREIRLPVR Trigger: TCTCACCGGCAGTCTGATTTCTCTTCCACAAATTCAGAAAGAAGTTAGTTGTCCAAGGCAAAGCCATGGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | TCACATCTCTGCTTATTGCTGATGAAATCTGAACCATaGATCTTTTGGGATCCACCTCCTTCAGTTTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SHLCLLLMKSEP*IFWDPPPSVWG Trigger: GCCCCAAACTGAAGGAGGTGGATCCCAAAAGATGCATGGTTCAGATTTCATCAGCAATAAGCAGAGATGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | CATGTAAACTTTGAGCTAGGAGCAGATAATGGAAGATaGCCAGGGAAGGCTCCTATCTCTGCATATCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: HVNFELGADNGR*PGKAPISAYPS Trigger: TGATGGATATGCAGAGATAGGAGCCTTCCCTGGGCATCTTCCATTATCTGCTCCTAGCTCAAAGTTTACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | GGGTTCTATGGTCCTCCTGGTCATAGAAACAGTATGTaGCAAAGTCGAGAAGATTCATCGGAGCTCATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GFYGPPGHRNSM*QSREDSSELIC Trigger: ACAAATGAGCTCCGATGAATCTTCTCGACTTTGGCACATACTGTTTCTATGACCAGGAGGACCATAGAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | TGCTTATTGCTGATGAAATCTGAACCATGCATCTTTTaGGATCCACCTCCTTCAGTTTGGGGCAGATCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: CLLLMKSEPCIF*DPPPSVWGRSC Trigger: GCAAGATCTGCCCCAAACTGAAGGAGGTGGATCCCAAAAGATGCATGGTTCAGATTTCATCAGCAATAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | CCTTTATTTGGGGGTTTCCAGGTAAGCATCCTCAGATaGATTCAGGGAACATTGTTTTTAGGGAATCCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PLFGGFQVSILR*IQGTLFLGNPA Trigger: AGCCGGATTCCCTAAAAACAATGTTCCCTGAATCCATCTGAGGATGCTTACCTGGAAACCCCCAAATAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | GGAATGGCTTCTGTGAGCATCGCCATGGCTTTGCCTTaGACAACTAACTTCTTTCTGAATTTGTGGAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GMASVSIAMALP*TTNFFLNLWKR Trigger: TCTCTTCCACAAATTCAGAAAGAAGTTAGTTGTCCAAGGCAAAGCCATGGCGATGCTCACAGAAGCCATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | AGGCAGATGTTGAACTTTAATGCTTCTGCCTCAGTTTaGCAAGTGCCAGGAATTAAAAGCATGTTCTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RQMLNFNASASV*QVPGIKSMFSH Trigger: GTGGGAGAACATGCTTTTAATTCCTGGCACTTGGCAAACTGAGGCAGAAGCATTAAAGTTCAACATCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | GAACCATGCATCTTTTGGGATCCACCTCCTTCAGTTTaGGGCAGATCTTGCAGAAAAGCAACATTTGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: EPCIFWDPPPSV*GRSCRKATFEE Trigger: TTCTTCAAATGTTGCTTTTCTGCAAGATCTGCCCCAAACTGAAGGAGGTGGATCCCAAAAGATGCATGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CCA 72 bp | TTCTCTTTCTCTGGTCCAAGGATGGAGAAAACATCCTaGATGAAAGCTGCATTCTCTGAAATATTCTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: FSFSGPRMEKTS*MKAAFSEIFSP Trigger: GGGAGAGAATATTTCAGAGAATGCAGCTTTCATCCAGGATGTTTTCTCCATCCTTGGACCAGAGAAAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | TGTGACATTTACATGATCATTGGCATGGGGACAAGATaGGGTGGCCTAGCTTCTTATTCTATTCATGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: CDIYMIIGMGTR*GGLASYSIHVY Trigger: ATAGACATGAATAGAATAAGAAGCTAGGCCACCTCATCTTGTCCCCATGCCAATGATCATGTAAATGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR GCA 72 bp | GTCCTGTCAGTAGAGAACAGGCTTTTATCACATCTCTaGTTATTGCTGATGAAATCTGAACCATGCATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VLSVENRLLSHL*LLLMKSEPCIF Trigger: AAAGATGCATGGTTCAGATTTCATCAGCAATAAGCAGAGATGTGATAAAAGCCTGTTCTCTACTGACAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | ATAAATGAGGTACAGTGGGAAATTAAGATGCATGATTaGCATCTGACTGGAACATTCTGGAAGAAGAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: INEVQWEIKMHD*HLTGTFWKKRQ Trigger: TTGCCTCTTCTTCCAGAATGTTCCAGTCAGATGTCAATCATGCATCTTAATTTCCCACTGTACCTCATTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR TCA 72 bp | TTCAAAACAACAAAGTACACAATATTCTTTGATTTATaGCCTGAGTCTGGACTTGAGCACATAGAAGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: FKTTKYTIFFDL*PESGLEHIEGV Trigger: AACTCCTTCTATGTGCTCAAGTCCAGACTCAGGTCATAAATCAAAGAATATTGTGTACTTTGTTGTTTTGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCGCGGGGCATGCACATGCGCAGTGAGCTGGCAACGCGGTGTGGCTGGTGGGGAAGTCAGGGGCTaGGCTTCTCCGTGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SARGACTCAVSWQRGVAGGEVRG*ASPWLL Trigger: GAGGAGCCACGGAGAAGCCCAGCCCCTGACTTCCCC...ACCAGCCACACCGCGTTGCCAGCTCACTGCGCATGTGCATGCCCCGCGGGCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086029.10 |
||
| CDS-3UTR GCA 90 bp | CCCCTCCATGCCTTGGTGGGAGGGGGTCTCCACTGGGTGGAGGAAGGAAGCCAGACTGCTCGCTGTCACTaGCTGCAGACAGAGATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLHALVGGGLHWVEEGSQTARCH*LQTEIG Trigger: ACCGATCTCTGTCTGCAGGCAGTGACAGCGAGCAGT...CTGGCTTCCTTCCTCCACCCAGTGGAGACCCCCTCCCACCAAGGCATGGAGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR GCA 90 bp | ACAGAGTCTGCCCGCGGGGCATGCACATGCGCAGTGAGCTGGCAACGCGGTGTGGCGTGGTACAGGATGTaGTTCAGCTCTTCCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TESARGACTCAVSWQRGVAWYRM*FSSSSV Trigger: CACGCTGGAAGAGCTGAAGCACATCCTGTACCACGC...CACACCGCGTTGCCAGCTCACTGCGCATGTGCATGCCCCGCGGGCAGACTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR CCA 90 bp | CCCCTCCATGCCTTGGTGGGAGGGGGTCTCCACTGGGTGGAGGAAGGAAGCCAGCCTTCAAACTCTGTCTaGCAGTTCCCCGAGGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PLHALVGGGLHWVEEGSQPSNSV*QFPEVS Trigger: CGAGACCTCGGGGAACTGCCAGACAGAGTTTGAAGG...CTGGCTTCCTTCCTCCACCCAGTGGAGACCCCCTCCCACCAAGGCATGGAGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR TCA 90 bp | ACAGAGTCTGCCCGCGGGGCATGCACATGCGCAGTGAGCTGGCAACGCGGTGTGCAGACAGAGATCGGTTaGGGTAATTCCCCTTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: TESARGACTCAVSWQRGVQTEIG*GNSPCT Trigger: TGTACAAGGGGAATTACCTCAACCGATCTCTGTCTG...CACACCGCGTTGCCAGCTCACTGCGCATGTGCATGCCCCGCGGGCAGACTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR GCA 90 bp | TTTCCCCCTCCATGCCTTGGTGGGAGGGGGTCTCCACTGGGTGGAGGAAGGAAGCAGGATCTGGTTGGCTaGGATCAGCATGACGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FPPPCLGGRGSPLGGGRKQDLVG*DQHDAY Trigger: ATAAGCGTCATGCTGATCGCAGCCAACCAGATCCTG...CTTCCTTCCTCCACCCAGTGGAGACCCCCTCCCACCAAGGCATGGAGGGGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR TCA 90 bp | TCTGCCCGCGGGGCATGCACATGCGCAGTGAGCTGGCAACGCGGTGTGGCTGGTGCCCAAGAATCGTCATaGATTCATCAAAATCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: SARGACTCAVSWQRGVAGAQESS*IHQNLP Trigger: AGGTAGATTTTGATGAATTCATGACGATTCTTGGGC...ACCAGCCACACCGCGTTGCCAGCTCACTGCGCATGTGCATGCCCCGCGGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CAA 72 bp | GACTCCAGGCAGTTTTATGAAGTGACTCTGTGCCCCTaGGGCTTCTTGGGACCTCTGACCTGCTCCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DSRQFYEVTLCP*GFLGPLTCSLL Trigger: GAGGAGGGAGCAGGTCAGAGGTCCCAAGAAGCCCAAGGGGCACAGAGTCACTTCATAAAACTGCCTGGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CAA 72 bp | GTGACTCAGCCTAGGGAAGAAGCAATAAGGGCAGGTTaGCAAAGGGCACCGGAAGAAGGGAAGGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTQPREEAIRAG*QRAPEEGKAGC Trigger: GCAGCCTGCCTTCCCTTCTTCCGGTGCCCTTTGCAAACCTGCCCTTATTGCTTCTTCCCTAGGCTGAGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| CDS-3UTR GCA 90 bp | AAAGGCGATAAAGAACAGCAGGGACCGCAAGGAGCTGCACCCTGCTTAATGGCTCTCGCTGTCACTGCCTaGAGACAGAGATCGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KGDKEQQGPQGAAPCLMALAVTA*RQRSVE Trigger: CTCAACCGATCTCTGTCTGCAGGCAGTGACAGCGAG...AGCCATTAAGCAGGGTGCAGCTCCTTGCGGTCCCTGCTGTTCTTTATCGCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CAA 72 bp | AGACAGCCCTTTTGTGTCCCTGCCAAGGAGATGGAGTaGATCCGTGACCCCGGTTGCACTGCAAACTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQPFCVPAKEME*IRDPGCTANLS Trigger: ACTCAAGTTTGCAGTGCAACCGGGGTCACGGATCAACTCCATCTCCTTGGCAGGGACACAAAAGGGCTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CAA 72 bp | CTCATGCTAGCCCAGAGCTCTGTATGTAGCCCAGGCTaGCCTGAAACTTCACCATGGAACTCAGACTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LMLAQSSVCSPG*PETSPWNSDCP Trigger: AGGGCAGTCTGAGTTCCATGGTGAAGTTTCAGGCAAGCCTGGGCTACATACAGAGCTCTGGGCTAGCATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| CDS-3UTR TCA 90 bp | CCCAGAAGTCAACTTCAGCAGGGAGTCTCCGTGGGTCCCTGGGTTGAAAGAATTTCCTTCATCGTTAAGTaGTCCCGGAAGGCGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PRSQLQQGVSVGPWVERISFIVK*SRKAWY Trigger: GTACCACGCCTTCCGGGATCACTTAACGATGAAGGA...AATTCTTTCAACCCAGGGACCCACGGAGACTCCCTGCTGAAGTTGACTTCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGGCCACCATGCTATCTGGATGGCTACTGGAATTCCAAGACGAAAAGAAGCATCTTTTCCCAGGTaGGGAAGTCAGGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRGHHAIWMATGIPRRKEASFPR*GSQGLG Trigger: GCCCAGCCCCTGACTTCCCCACCTGGGAAAAGATGC...TTCTTTTCGTCTTGGAATTCCAGTAGCCATCCAGATAGCATGGTGGCCTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086029.10 |
||
| CDS-3UTR TCA 90 bp | GGAAGCCAGGGTGAGATGGAAAGTCCCCTTTTCTGTAGCAACCCAGAAGTCAACTCCTTCATCGTTAAGTaGTCCCGGAAGGCGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GSQGEMESPLFCSNPEVNSFIVK*SRKAWY Trigger: GTACCACGCCTTCCGGGATCACTTAACGATGAAGGA...GTTGACTTCTGGGTTGCTACAGAAAAGGGGACTTTCCATCTCACCCTGGCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR GCA 90 bp | AAAGGCGATAAAGAACAGCAGGGACCGCAAGGAGCTGCACCCTGCTTAATGGCTGAGATATTAGCCAACTaGTCGCTGTCACTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KGDKEQQGPQGAAPCLMAEILAN*SLSLPA Trigger: TGCAGGCAGTGACAGCGAGCAGTTGGCTAATATCTC...AGCCATTAAGCAGGGTGCAGCTCCTTGCGGTCCCTGCTGTTCTTTATCGCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGAAGTCAACTTCAGCAGGGAGTCTCCGTGGGTCCCTGGGTTGAAAGAATTTCCATGTCCAAACGCTaGATGATGATAGCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRSQLQQGVSVGPWVERISMSKR*MMIASS Trigger: GGAGCTGGCTATCATCATGCAGCGTTTGGACATGGA...AATTCTTTCAACCCAGGGACCCACGGAGACTCCCTGCTGAAGTTGACTTCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR GCA 90 bp | CTCTCAGAGGCCACCATGCTATCTGGATGGCTACTGGAATTCCAAGACGAAAAGGCGTGGTACAGGATGTaGTTCAGCTCTTCCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSEATMLSGWLLEFQDEKAWYRM*FSSSSV Trigger: CACGCTGGAAGAGCTGAAGCACATCCTGTACCACGC...CTTTTCGTCTTGGAATTCCAGTAGCCATCCAGATAGCATGGTGGCCTCTGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR CCA 90 bp | GAAGCCAGGGTGAGATGGAAAGTCCCCTTTTCTGTAGCAACCCAGAAGTCAACTCCTTCAAACTCTGTCTaGCAGTTCCCCGAGGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EARVRWKVPFSVATQKSTPSNSV*QFPEVS Trigger: CGAGACCTCGGGGAACTGCCAGACAGAGTTTGAAGG...AGTTGACTTCTGGGTTGCTACAGAAAAGGGGACTTTCCATCTCACCCTGGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGCCAGGGTGAGATGGAAAGTCCCCTTTTCTGTAGCAACCCAGAAGTCATCCTTCATCGTTAAGTaGTCCCGGAAGGCGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KEARVRWKVPFSVATQKSSFIVK*SRKAWY Trigger: GTACCACGCCTTCCGGGATCACTTAACGATGAAGGA...TGACTTCTGGGTTGCTACAGAAAAGGGGACTTTCCATCTCACCCTGGCTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR GCA 90 bp | CCCCGGTTGCACTGCAAACTTGAGTTCTTTACTGAAGGGTACCAATGCATCCATCTCGCTGTCACTGCCTaGAGACAGAGATCGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRLHCKLEFFTEGYQCIHLAVTA*RQRSVE Trigger: CTCAACCGATCTCTGTCTGCAGGCAGTGACAGCGAG...ATGGATGCATTGGTACCCTTCAGTAAAGAACTCAAGTTTGCAGTGCAACCGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR GCA 90 bp | GGAAGCCAGGGTGAGATGGAAAGTCCCCTTTTCTGTAGCAACCCAGAAGTCAACTCCATGTCCAAACGCTaGATGATGATAGCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSQGEMESPLFCSNPEVNSMSKR*MMIASS Trigger: GGAGCTGGCTATCATCATGCAGCGTTTGGACATGGA...GTTGACTTCTGGGTTGCTACAGAAAAGGGGACTTTCCATCTCACCCTGGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGGCGATAAAGAACAGCAGGGACCGCAAGGAGCTGCACCCTGCTTAATGCTTTCGGGGGTTTCTTaGTCCCCCTTTGTCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: RKGDKEQQGPQGAAPCLMLSGVS*SPFVSF Trigger: GAATGAGACAAAGGGGGACCAAGAAACCCCCGAAAG...CATTAAGCAGGGTGCAGCTCCTTGCGGTCCCTGCTGTTCTTTATCGCCTTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000086029.10 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGCCAGGGTGAGATGGAAAGTCCCCTTTTCTGTAGCAACCCAGAAGTCACCAGCGGTTACATGGTaGAACGGCATCTTTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KEARVRWKVPFSVATQKSPAVTW*NGIFSQ Trigger: CTGGGAAAAGATGCCGTTCCACCATGTAACCGCTGG...TGACTTCTGGGTTGCTACAGAAAAGGGGACTTTCCATCTCACCCTGGCTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086029.10 |
||
| CDS-3UTR GCA 90 bp | GCCAGGGTGAGATGGAAAGTCCCCTTTTCTGTAGCAACCCAGAAGTCAACTTCAGAGATATTAGCCAACTaGTCGCTGTCACTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARVRWKVPFSVATQKSTSEILAN*SLSLPA Trigger: TGCAGGCAGTGACAGCGAGCAGTTGGCTAATATCTC...TGAAGTTGACTTCTGGGTTGCTACAGAAAAGGGGACTTTCCATCTCACCCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR GCA 90 bp | GAAGCCAGGGTGAGATGGAAAGTCCCCTTTTCTGTAGCAACCCAGAAGTCAACTTCCATGTCCAAACGCTaGATGATGATAGCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EARVRWKVPFSVATQKSTSMSKR*MMIASS Trigger: GGAGCTGGCTATCATCATGCAGCGTTTGGACATGGA...AGTTGACTTCTGGGTTGCTACAGAAAAGGGGACTTTCCATCTCACCCTGGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR GCA 90 bp | CTATGTATGGCTTTCCTTGAGCAAGAGGAAGCAGAACTTTCTGGACCCGTCAGCCAGGATCTGGTTGGCTaGGATCAGCATGACGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LCMAFLEQEEAELSGPVSQDLVG*DQHDAY Trigger: ATAAGCGTCATGCTGATCGCAGCCAACCAGATCCTG...GCTGACGGGTCCAGAAAGTTCTGCTTCCTCTTGCTCAAGGAAAGCCATACATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| CDS-3UTR GCA 90 bp | CCCCGGTTGCACTGCAAACTTGAGTTCTTTACTGAAGGGTACCAATGCATCCATCAGGATCTGGTTGGCTaGGATCAGCATGACGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PRLHCKLEFFTEGYQCIHQDLVG*DQHDAY Trigger: ATAAGCGTCATGCTGATCGCAGCCAACCAGATCCTG...ATGGATGCATTGGTACCCTTCAGTAAAGAACTCAAGTTTGCAGTGCAACCGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| CDS-3UTR CCA 90 bp | CCCACTTCAGAGTTGCTACTGGCGGTTGAAGCAATAATTGAGAACTCCTGGCTAAAGCCAGCGGTTACATaGTGGAACGGCATCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTSELLLAVEAIIENSWLKPAVT*WNGIFS Trigger: GGAAAAGATGCCGTTCCACCATGTAACCGCTGGCTT...TAGCCAGGAGTTCTCAATTATTGCTTCAACCGCCAGTAGCAACTCTGAAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086029.10 |
||
| 3UTR CAA 72 bp | ATGGAGTTGATCCGTGACCCCGGTTGCACTGCAAACTaGAGTTCTTTACTGAAGGGTACCAATGCATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: MELIRDPGCTAN*SSLLKGTNASI Trigger: GATGGATGCATTGGTACCCTTCAGTAAAGAACTCAAGTTTGCAGTGCAACCGGGGTCACGGATCAACTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CAA 72 bp | ACTGCCCTTGAACTTGCTCCACAGTCCAGGCAGATGTaGAACTTTAATGCTTCTGCCTCAGTTTGCCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TALELAPQSRQM*NFNASASVCQV Trigger: CACTTGGCAAACTGAGGCAGAAGCATTAAAGTTCAACATCTGCCTGGACTGTGGAGCAAGTTCAAGGGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| CDS-3UTR TCA 90 bp | AGGCCACCATGCTATCTGGATGGCTACTGGAATTCCAAGACGAAAAGAAAGCAGCAGACAGAGATCGGTTaGGGTAATTCCCCTTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RPPCYLDGYWNSKTKRKQQTEIG*GNSPCT Trigger: TGTACAAGGGGAATTACCTCAACCGATCTCTGTCTG...CTGCTTTCTTTTCGTCTTGGAATTCCAGTAGCCATCCAGATAGCATGGTGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR GCA 90 bp | ATCCTTCCATATTTCTGCTTCAAGCTTCTAGGTCTCCTTTTCTTAGCTGGGGAACTCGCTGTCACTGCCTaGAGACAGAGATCGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILPYFCFKLLGLLFLAGELAVTA*RQRSVE Trigger: CTCAACCGATCTCTGTCTGCAGGCAGTGACAGCGAG...TTCCCCAGCTAAGAAAAGGAGACCTAGAAGCTTGAAGCAGAAATATGGAAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR GCA 90 bp | CGGTTGCACTGCAAACTTGAGTTCTTTACTGAAGGGTACCAATGCATCCATCCAGAGATATTAGCCAACTaGTCGCTGTCACTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLHCKLEFFTEGYQCIHPEILAN*SLSLPA Trigger: TGCAGGCAGTGACAGCGAGCAGTTGGCTAATATCTC...TGGATGGATGCATTGGTACCCTTCAGTAAAGAACTCAAGTTTGCAGTGCAACCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CAA 72 bp | CTGTCTCTCTCCCTGCTCTTAGATTTTTCAATCACTTaGAGAGTCAATGGCTGCAGGCTAGGAAGGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLLLDFSIT*RVNGCRLGRML Trigger: GAGCATCCTTCCTAGCCTGCAGCCATTGACTCTCAAAGTGATTGAAAAATCTAAGAGCAGGGAGAGAGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CAA 72 bp | AGAGTCGGAATGGCTTCTGTGAGCATCGCCATGGCTTaGCCTTGGACAACTAACTTCTTTCTGAATTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVGMASVSIAMA*PWTTNFFLNLW Trigger: CCACAAATTCAGAAAGAAGTTAGTTGTCCAAGGCAAAGCCATGGCGATGCTCACAGAAGCCATTCCGACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| CDS-3UTR TCA 90 bp | AGAATAGCATCACGCGTGGAAAAGTCTCTTGTCTGTCTACGTGTCTGGGTTATACAGACAGAGATCGGTTaGGGTAATTCCCCTTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RIASRVEKSLVCLRVWVIQTEIG*GNSPCT Trigger: TGTACAAGGGGAATTACCTCAACCGATCTCTGTCTG...TATAACCCAGACACGTAGACAGACAAGAGACTTTTCCACGCGTGATGCTATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CAA 72 bp | TCAGTCTACATCCAGGGCAGTGAGGGAACGGTTTGTTaGAAAGTTAAAGGGTTGAGAGTCAGCTTGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVYIQGSEGTVC*KVKGLRVSLSF Trigger: GAAAGACAAGCTGACTCTCAACCCTTTAACTTTCAAACAAACCGTTCCCTCACTGCCCTGGATGTAGACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| CDS-3UTR TCA 90 bp | GTTGCTTATACCTGTCTTTTCTTTCTCGCTCTCAGAGGCCACCATGCTATCTGGGCCCAAGAATCGTCATaGATTCATCAAAATCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: VAYTCLFFLALRGHHAIWAQESS*IHQNLP Trigger: AGGTAGATTTTGATGAATTCATGACGATTCTTGGGC...CCAGATAGCATGGTGGCCTCTGAGAGCGAGAAAGAAAAGACAGGTATAAGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR GCA 90 bp | GAAGCAATAATTGAGAACTCCTGGCTATTTATTGCATTGGGAAACAAAACCATGACTGCTCGCTGTCACTaGCTGCAGACAGAGATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: EAIIENSWLFIALGNKTMTARCH*LQTEIG Trigger: ACCGATCTCTGTCTGCAGGCAGTGACAGCGAGCAGT...CATGGTTTTGTTTCCCAATGCAATAAATAGCCAGGAGTTCTCAATTATTGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CAA 72 bp | GAGATAGAGAACAGATTCACGTCCAGAGTAAGCAATTaGGGGAGAATAGCATCACGCGTGGAAAAGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EIENRFTSRVSN*GRIASRVEKSL Trigger: AAGAGACTTTTCCACGCGTGATGCTATTCTCCCCAAATTGCTTACTCTGGACGTGAATCTGTTCTCTATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| 3UTR CAA 72 bp | TCTGATCGCTTCTTTCATGTCTTTCCTTCCATGATATaGGGAGATGGTGCTCACACCCTTGTAGATTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SDRFFHVFPSMI*GDGAHTLVDFS Trigger: GCTAAAATCTACAAGGGTGTGAGCACCATCTCCCAATATCATGGAAGGAAAGACATGAAAGAAGCGATCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CAA 72 bp | TTGCCTTGGCAACATCTTATAGATCTCATATGGAACTaGCACATCTTCTGGAAGTCGCTGTTAACAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPWQHLIDLIWN*HIFWKSLLTVP Trigger: TGGAACTGTTAACAGCGACTTCCAGAAGATGTGCAAGTTCCATATGAGATCTATAAGATGTTGCCAAGGCAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CAA 72 bp | AATATAATAGGAAAAGGCAGGGAAGCCATACAATTCTaGGAGGTTAATTTCCCATCTCAGCAGGAGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NIIGKGREAIQF*EVNFPSQQEMD Trigger: ATCCATCTCCTGCTGAGATGGGAAATTAACCTCCAAGAATTGTATGGCTTCCCTGCCTTTTCCTATTATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| 3UTR CAA 72 bp | TGTGTGTGTGTTCATTCACATGTAGCTCTGTCTATCTaGTTCTGTAGTAAGAGAAACCTTGAACTCCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVHSHVALSI*FCSKRNLELLG Trigger: TCCTAGGAGTTCAAGGTTTCTCTTACTACAGAACAAGATAGACAGAGCTACATGTGAATGAACACACACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
||
| 3UTR CAA 72 bp | TCAGTAGAGAACAGGCTTTTATCACATCTCTGCTTATaGCTGATGAAATCTGAACCATGCATCTTTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVENRLLSHLCL*LMKSEPCIFWD Trigger: ATCCCAAAAGATGCATGGTTCAGATTTCATCAGCAATAAGCAGAGATGTGATAAAAGCCTGTTCTCTACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| CDS-3UTR CAA 90 bp | ACAGAGTCTGCCCGCGGGGCATGCACATGCGCAGTGAGCTGGCAACGCGGTGTGGCGCATATGAGGCTCTaGCGGACGCAGGTCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TESARGACTCAVSWQRGVAHMRL*RTQVCR Trigger: CCGACAGACCTGCGTCCGCAAGAGCCTCATATGCGC...CACACCGCGTTGCCAGCTCACTGCGCATGTGCATGCCCCGCGGGCAGACTCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| CDS-3UTR CAA 90 bp | TCTGCCCGCGGGGCATGCACATGCGCAGTGAGCTGGCAACGCGGTGTGGCTGGTCTCCGCAGGATCTGGTaGGCTGCGATCAGCATGACG | + |
|
Preference number: 5 (lower is better) Translates to: SARGACTCAVSWQRGVAGLRRIW*AAISMT Trigger: CGTCATGCTGATCGCAGCCAACCAGATCCTGCGGAG...ACCAGCCACACCGCGTTGCCAGCTCACTGCGCATGTGCATGCCCCGCGGGCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| CDS-3UTR CAA 90 bp | CAGATCTCCCGTGTGAATGAACAGAGTCTGCCCGCGGGGCATGCACATGCGCAGCTCCGCAGGATCTGGTaGGCTGCGATCAGCATGACG | + |
|
Preference number: 5 (lower is better) Translates to: QISRVNEQSLPAGHAHAQLRRIW*AAISMT Trigger: CGTCATGCTGATCGCAGCCAACCAGATCCTGCGGAG...CTGCGCATGTGCATGCCCCGCGGGCAGACTCTGTTCATTCACACGGGAGATCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| CDS-3UTR CAA 90 bp | TTTCCCCCTCCATGCCTTGGTGGGAGGGGGTCTCCACTGGGTGGAGGAAGGAAGCCTTTCGGGGGTTTCTaGGTCCCCCTTTGTCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: FPPPCLGGRGSPLGGGRKPFGGF*VPLCLI Trigger: AATGAGACAAAGGGGGACCAAGAAACCCCCGAAAGG...CTTCCTTCCTCCACCCAGTGGAGACCCCCTCCCACCAAGGCATGGAGGGGGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000086029.10 |
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| CDS-3UTR CAA 90 bp | GCTTTCCCCCTCCATGCCTTGGTGGGAGGGGGTCTCCACTGGGTGGAGGAAGGATTGGAGATGAAGCCGTaGCCATCTCTGTCCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: AFPLHALVGGGLHWVEEGLEMKP*PSLSRT Trigger: TGTTCTGGACAGAGATGGCAACGGCTTCATCTCCAA...TCCTTCCTCCACCCAGTGGAGACCCCCTCCCACCAAGGCATGGAGGGGGAAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| CDS-3UTR CAA 90 bp | GCCATGGAAACCAACCGAGAGTGCCCCAGCTCTACCGACAAGTGTCCTGTAGAAGCGCATATGAGGCTCTaGCGGACGCAGGTCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: AMETNRECPSSTDKCPVEAHMRL*RTQVCR Trigger: CCGACAGACCTGCGTCCGCAAGAGCCTCATATGCGC...TTCTACAGGACACTTGTCGGTAGAGCTGGGGCACTCTCGGTTGGTTTCCATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| CDS-3UTR CAA 90 bp | TTTCCCCCTCCATGCCTTGGTGGGAGGGGGTCTCCACTGGGTGGAGGAAGGAAGTTGGAGATGAAGCCGTaGCCATCTCTGTCCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: FPPPCLGGRGSPLGGGRKLEMKP*PSLSRT Trigger: TGTTCTGGACAGAGATGGCAACGGCTTCATCTCCAA...CTTCCTTCCTCCACCCAGTGGAGACCCCCTCCCACCAAGGCATGGAGGGGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| CDS-3UTR CAA 90 bp | ACTTCTTACACTGATGCATTCAGTTCCTGTGTGCCTCGGATGCGGAGGATGCTGGCGCATATGAGGCTCTaGCGGACGCAGGTCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TSYTDAFSSCVPRMRRMLAHMRL*RTQVCR Trigger: CCGACAGACCTGCGTCCGCAAGAGCCTCATATGCGC...CAGCATCCTCCGCATCCGAGGCACACAGGAACTGAATGCATCAGTGTAAGAAGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111288.4 |
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| CDS-3UTR CAA 90 bp | GCTTTCCCCCTCCATGCCTTGGTGGGAGGGGGTCTCCACTGGGTGGAGGAAGGAAAACTCTCCTCCTCGTaGATGATAATGTTCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: AFPLHALVGGGLHWVEEGKLSSS*MIMFSM Trigger: CATTGAGAACATTATCATCAACGAGGAGGAGAGTTT...TCCTTCCTCCACCCAGTGGAGACCCCCTCCCACCAAGGCATGGAGGGGGAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| CDS-3UTR CAA 90 bp | AAGGAAGCCAGGGTGAGATGGAAAGTCCCCTTTTCTGTAGCAACCCAGAAGTCACTCCGCAGGATCTGGTaGGCTGCGATCAGCATGACG | + |
|
Preference number: 5 (lower is better) Translates to: KEARVRWKVPFSVATQKSLRRIW*AAISMT Trigger: CGTCATGCTGATCGCAGCCAACCAGATCCTGCGGAG...TGACTTCTGGGTTGCTACAGAAAAGGGGACTTTCCATCTCACCCTGGCTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| CDS-3UTR CAA 90 bp | AAAGGCGATAAAGAACAGCAGGGACCGCAAGGAGCTGCACCCTGCTTAATGGCTTTTCTTGGTCCCCCTTaGTCTCATTCTCAGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KGDKEQQGPQGAAPCLMAFLGPP*SHSQAS Trigger: GGAAGCCTGAGAATGAGACAAAGGGGGACCAAGAAA...AGCCATTAAGCAGGGTGCAGCTCCTTGCGGTCCCTGCTGTTCTTTATCGCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086029.10 |
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| CDS GCA 90 bp | CAGTTCTTCCACGGAGATATTAGCCAACTGCTCGCTGTCACTGCCTaGAGACAGAGATCGGTTGAGGTAATTCCCCTTGTACAACAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QFFHGDISQLLAVTA*RQRSVEVIPLVQQA Trigger: GGCTTGTTGTACAAGGGGAATTACCTCAACCGATCTCTGTCTGCAGGCAGTGACAGCGAGCAGTTGGCTAATATCTCCGTGGAAGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 ENSMUST00000141131.5 |
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| CDS-3UTR CAA 90 bp | GGAAGCCAGGGTGAGATGGAAAGTCCCCTTTTCTGTAGCAACCCAGAAGTCAACTTGGAGATGAAGCCGTaGCCATCTCTGTCCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: GSQGEMESPLFCSNPEVNLEMKP*PSLSRT Trigger: TGTTCTGGACAGAGATGGCAACGGCTTCATCTCCAA...GTTGACTTCTGGGTTGCTACAGAAAAGGGGACTTTCCATCTCACCCTGGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| CDS TCA 90 bp | CATCCCGACCTTCTGATGACACCAGCTTGGGCCCAAGAATCGTCATaGATTCATCAAAATCTACCTGCCCATCTCCGTCCATGTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HPDLLMTPAWAQESS*IHQNLPAHLRPCPN Trigger: GTTTGGACATGGACGGAGATGGGCAGGTAGATTTTGATGAATTCATGACGATTCTTGGGCCCAAGCTGGTGTCATCAGAAGGTCGGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| CDS GCA 90 bp | AAGGCGTGGTACAGGATGTGCTTCAGCTCTTCCAGCGTGACTCTCTaGATGTCGAACTGCCAGAAGATACTGTCTATCGTATTTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KAWYRMCFSSSSVTL*MSNCQKILSIVFPR Trigger: TCTTGGAAATACGATAGACAGTATCTTCTGGCAGTTCGACATGCAGAGAGTCACGCTGGAAGAGCTGAAGCACATCCTGTACCACGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR CAA 90 bp | GCCATGGAAACCAACCGAGAGTGCCCCAGCTCTACCGACAAGTGTCCTGTAGAAAAACTCTCCTCCTCGTaGATGATAATGTTCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: AMETNRECPSSTDKCPVEKLSSS*MIMFSM Trigger: CATTGAGAACATTATCATCAACGAGGAGGAGAGTTT...TTCTACAGGACACTTGTCGGTAGAGCTGGGGCACTCTCGGTTGGTTTCCATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS-3UTR CAA 90 bp | CCCACTTCAGAGTTGCTACTGGCGGTTGAAGCAATAATTGAGAACTCCTGGCTAAAACTCTCCTCCTCGTaGATGATAATGTTCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: PTSELLLAVEAIIENSWLKLSSS*MIMFSM Trigger: CATTGAGAACATTATCATCAACGAGGAGGAGAGTTT...TAGCCAGGAGTTCTCAATTATTGCTTCAACCGCCAGTAGCAACTCTGAAGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS CCA 72 bp | CAGCGGTTACATGGTGGAACGGCATCTTTTCCCAGGTaGGGAAGTCAGGGGCTGGGCTTCTCCGTGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QRLHGGTASFPR*GSQGLGFSVAP Trigger: AGGAGCCACGGAGAAGCCCAGCCCCTGACTTCCCCACCTGGGAAAAGATGCCGTTCCACCATGTAACCGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086029.10 ENSMUST00000202728.2 |
||
| CDS GCA 72 bp | AAATCTACCTGCCCATCTCCGTCCATGTCCAAACGCTaGATGATGATAGCCAGCTCCACTTCGCTCGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: KSTCPSPSMSKR*MMIASSTSLGM Trigger: CATGCCGAGCGAAGTGGAGCTGGCTATCATCATGCAGCGTTTGGACATGGACGGAGATGGGCAGGTAGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
||
| CDS TCA 72 bp | ACTGCTCGCTGTCACTGCCTGCAGACAGAGATCGGTTaGGGTAATTCCCCTTGTACAACAAGCCAGCGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: TARCHCLQTEIG*GNSPCTTSQRL Trigger: TAACCGCTGGCTTGTTGTACAAGGGGAATTACCTCAACCGATCTCTGTCTGCAGGCAGTGACAGCGAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 ENSMUST00000141131.5 ENSMUST00000202728.2 |
||
| CDS GCA 72 bp | CACGGAGATATTAGCCAACTGCTCGCTGTCACTGCCTaGAGACAGAGATCGGTTGAGGTAATTCCCCTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: HGDISQLLAVTA*RQRSVEVIPLV Trigger: TACAAGGGGAATTACCTCAACCGATCTCTGTCTGCAGGCAGTGACAGCGAGCAGTTGGCTAATATCTCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 ENSMUST00000141131.5 |
||
| CDS GCA 72 bp | ATTTCATCCAGTTCTTCCACGGAGATATTAGCCAACTaGTCGCTGTCACTGCCTGCAGACAGAGATCGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ISSSSSTEILAN*SLSLPADRDRL Trigger: CAACCGATCTCTGTCTGCAGGCAGTGACAGCGAGCAGTTGGCTAATATCTCCGTGGAAGAACTGGATGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 ENSMUST00000141131.5 |
||
| CDS TCA 72 bp | CTTCTGATGACACCAGCTTGGGCCCAAGAATCGTCATaGATTCATCAAAATCTACCTGCCCATCTCCGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LLMTPAWAQESS*IHQNLPAHLRP Trigger: TGGACGGAGATGGGCAGGTAGATTTTGATGAATTCATGACGATTCTTGGGCCCAAGCTGGTGTCATCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| CDS CAA 90 bp | ATCGTATTTCCAAGAAAACCATCCCGACCTTCTGATGACACCAGCTaGGGCCCAAGAATCGTCATGAATTCATCAAAATCTACCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: IVFPRKPSRPSDDTS*GPRIVMNSSKSTCP Trigger: TGGGCAGGTAGATTTTGATGAATTCATGACGATTCTTGGGCCCAAGCTGGTGTCATCAGAAGGTCGGGATGGTTTTCTTGGAAATACGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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| CDS CAA 72 bp | CCAAGAAAACCATCCCGACCTTCTGATGACACCAGCTaGGGCCCAAGAATCGTCATGAATTCATCAAAATCT | + |
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Preference number: 6 (lower is better) Translates to: PRKPSRPSDDTS*GPRIVMNSSKS Trigger: AGATTTTGATGAATTCATGACGATTCTTGGGCCCAAGCTGGTGTCATCAGAAGGTCGGGATGGTTTTCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086029.10 ENSMUST00000111287.8 ENSMUST00000111288.4 |
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