Pregenerated sensors for CALML4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032246Ensembl transcript IDs: ENSMUST00000034777.14, ENSMUST00000163820.3, ENSMUST00000213643.2, ENSMUST00000214633.2, ENSMUST00000215870.2, ENSMUST00000215968.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCCCTGGCCCACGTCCGCCTCTCCCCTCTGGTTCAGCCTGGCTTaGCTTCTGGGCCATTCATCATCTTGCCGTCTGCACAGCCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: LPWPTSASPLWFSLA*LLGHSSSCRLHSLG Trigger: CCCAAGGCTGTGCAGACGGCAAGATGATGAATGGCCCAGAAGTCAAGCCAGGCTGAACCAGAGGGGAGAGGCGGACGTGGGCCAGGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| 3UTR TCA 90 bp | AGTGGCTGCATTACTAGCCACTCTGAGCCACACTGGGATCCTCGGTaGGAGCTTGAACGAAGTGAACCCTGGCAGATGCCGGGACTGTCT | + |
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Preference number: 1 (lower is better) Translates to: SGCITSHSEPHWDPR*ELERSEPWQMPGLS Trigger: AGACAGTCCCGGCATCTGCCAGGGTTCACTTCGTTCAAGCTCTCACCGAGGATCCCAGTGTGGCTCAGAGTGGCTAGTAATGCAGCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| 3UTR CCA 90 bp | TTGAGAAGTACAATGGGTGAGGGGATGATGTTGCAGAGGCAGCACTaGCACACAACCCTGACTACAAATCATAGGGCTAGACTATGCTGC | + |
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Preference number: 1 (lower is better) Translates to: LRSTMGEGMMLQRQH*HTTLTTNHRARLCC Trigger: GCAGCATAGTCTAGCCCTATGATTTGTAGTCAGGGTTGTGTGCCAGTGCTGCCTCTGCAACATCATCCCCTCACCCATTGTACTTCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| 3UTR CCA 90 bp | GTGGGGCAAACCCTACCCAAGAAGTCATCTCTCCAGCCCCTATCTTaGGGCTATGTCTTTGACATTGTGACACATTATCACCTACAAAGC | + |
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Preference number: 1 (lower is better) Translates to: VGQTLPKKSSLQPLS*GYVFDIVTHYHLQS Trigger: GCTTTGTAGGTGATAATGTGTCACAATGTCAAAGACATAGCCCCAAGATAGGGGCTGGAGAGATGACTTCTTGGGTAGGGTTTGCCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| 3UTR CCA 90 bp | CGCACAGGAATGGTGATCCTCTGGATAAACGTGTCATATTTCACTTaGCCGTTTGGTTCAATGCCTGCTTCCTTGAAAAGATCATCCACT | + |
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Preference number: 1 (lower is better) Translates to: RTGMVILWINVSYFT*PFGSMPASLKRSST Trigger: AGTGGATGATCTTTTCAAGGAAGCAGGCATTGAACCAAACGGCCAAGTGAAATATGACACGTTTATCCAGAGGATCACCATTCCTGTGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214633.2 |
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| 3UTR TCA 90 bp | ACCCAAGAAGTCATCTCTCCAGCCCCTATCTTGGGGCTATGTCTTTaGCATTGTGACACATTATCACCTACAAAGCTGACATTTGATAAC | + |
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Preference number: 1 (lower is better) Translates to: TQEVISPAPILGLCL*HCDTLSPTKLTFDN Trigger: GTTATCAAATGTCAGCTTTGTAGGTGATAATGTGTCACAATGTCAAAGACATAGCCCCAAGATAGGGGCTGGAGAGATGACTTCTTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| 3UTR GCA 90 bp | ATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTATaGCATGCAGTGGTTGTGTCATCTCTAGACTTCCCTTACAAAAAG | + |
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Preference number: 1 (lower is better) Translates to: ITVIQCHGYIIYWYL*HAVVVSSLDFPYKK Trigger: CTTTTTGTAAGGGAAGTCTAGAGATGACACAACCACTGCATGGCATAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| 3UTR-3UTR CCA 90 bp | CACACCAGTAAAGTTCTAAAACCAAAAGTGGCTGCATTACTAGCCACTCTGAGCGCTGACCCTCTCCCCTaGCCCACGTCCGCCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: HTSKVLKPKVAALLATLSADPLP*PTSASP Trigger: GGGAGAGGCGGACGTGGGCCAGGGGAGAGGGTCAGC...GCTCAGAGTGGCTAGTAATGCAGCCACTTTTGGTTTTAGAACTTTACTGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCAGCCCCTATCTTGGGGCTATGTCTTTGACATTGTGACACATTATCACCTAGGACTGTCTCAGAGCTaGCCCTCTCCCCTGGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: LQPLSWGYVFDIVTHYHLGLSQS*PSPLAH Trigger: GTGGGCCAGGGGAGAGGGTCAGCTCTGAGACAGTCC...TAGGTGATAATGTGTCACAATGTCAAAGACATAGCCCCAAGATAGGGGCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| 3UTR-3UTR TCA 90 bp | AAACCAAAAGTGGCTGCATTACTAGCCACTCTGAGCCACACTGGGATCCTCGGTTGGTTCAGCCTGGCTTaGCTTCTGGGCCATTCATCA | + |
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Preference number: 2 (lower is better) Translates to: KPKVAALLATLSHTGILGWFSLA*LLGHSS Trigger: TGATGAATGGCCCAGAAGTCAAGCCAGGCTGAACCA...ACCGAGGATCCCAGTGTGGCTCAGAGTGGCTAGTAATGCAGCCACTTTTGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| 3UTR CAA 90 bp | TCGCACAGGAATGGTGATCCTCTGGATAAACGTGTCATATTTCACTaGGCCGTTTGGTTCAATGCCTGCTTCCTTGAAAAGATCATCCAC | + |
|
Preference number: 2 (lower is better) Translates to: SHRNGDPLDKRVIFH*AVWFNACFLEKIIH Trigger: GTGGATGATCTTTTCAAGGAAGCAGGCATTGAACCAAACGGCCAAGTGAAATATGACACGTTTATCCAGAGGATCACCATTCCTGTGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214633.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTTTGAGAAGTACAATGGGTGAGGGGATGATGTTGCAGAGGCAGCACTGGAGTTATCCAATGCCATaGCTACATCATTTATTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: KALRSTMGEGMMLQRQHWSYPMP*LHHLLV Trigger: TACCAATAAATGATGTAGCCATGGCATTGGATAACT...CCAGTGCTGCCTCTGCAACATCATCCCCTCACCCATTGTACTTCTCAAAGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTTGAAGTTGCCAACCATTTATTTTCAGTCACAATCTTCATCCTTATGAGGTTGCAGAGGCAGCACTaGCACACAACCCTGACTACA | + |
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Preference number: 2 (lower is better) Translates to: CFEVANHLFSVTIFILMRLQRQH*HTTLTT Trigger: TGTAGTCAGGGTTGTGTGCCAGTGCTGCCTCTGCAA...CCTCATAAGGATGAAGATTGTGACTGAAAATAAATGGTTGGCAACTTCAAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034777.14 |
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| 3UTR-3UTR GCA 90 bp | CTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTATGCCATCCGAAGGCTCTCATCTaGTCTCTTGATCTTGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: LITVIQCHGYIIYWYLCHPKALI*SLDLGS Trigger: GGAGCCAAGATCAAGAGAGCAGATGAGAGCCTTCGG...ATGGCATAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTACCGAAGGCTCTCATCTaGTCTCTTGATCTTGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: TDLITVIQCHGYIIYWYLPKALI*SLDLGS Trigger: GGAGCCAAGATCAAGAGAGCAGATGAGAGCCTTCGG...TAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTTGAAGTTGCCAACCATTTATTTTCAGTCACAATCTTCATCCTTATGAGGATTTATTGGTACTTATaGCATGCAGTGGTTGTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: CFEVANHLFSVTIFILMRIYWYL*HAVVVS Trigger: TGACACAACCACTGCATGGCATAAGTACCAATAAAT...CCTCATAAGGATGAAGATTGTGACTGAAAATAAATGGTTGGCAACTTCAAAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034777.14 |
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| 3UTR TCA 72 bp | CCCACGTCCGCCTCTCCCCTCTGGTTCAGCCTGGCTTaGCTTCTGGGCCATTCATCATCTTGCCGTCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: PTSASPLWFSLA*LLGHSSSCRLH Trigger: GTGCAGACGGCAAGATGATGAATGGCCCAGAAGTCAAGCCAGGCTGAACCAGAGGGGAGAGGCGGACGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| 3UTR GCA 72 bp | CTCGGTGAGAGCTTGAACGAAGTGAACCCTGGCAGATaGCGGGACTGTCTCAGAGCTGACCCTCTCCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: LGESLNEVNPGR*RDCLRADPLPW Trigger: CCAGGGGAGAGGGTCAGCTCTGAGACAGTCCCGGCATCTGCCAGGGTTCACTTCGTTCAAGCTCTCACCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| 3UTR CCA 72 bp | CCGCCTCTCCCCTCTGGTTCAGCCTGGCTTGACTTCTaGGCCATTCATCATCTTGCCGTCTGCACAGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: PPLPSGSAWLDF*AIHHLAVCTAL Trigger: CAAGGCTGTGCAGACGGCAAGATGATGAATGGCCCAGAAGTCAAGCCAGGCTGAACCAGAGGGGAGAGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| 3UTR TCA 72 bp | ATTACTAGCCACTCTGAGCCACACTGGGATCCTCGGTaGGAGCTTGAACGAAGTGAACCCTGGCAGATGCCG | + |
|
Preference number: 3 (lower is better) Translates to: ITSHSEPHWDPR*ELERSEPWQMP Trigger: CGGCATCTGCCAGGGTTCACTTCGTTCAAGCTCTCACCGAGGATCCCAGTGTGGCTCAGAGTGGCTAGTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| 3UTR-3UTR CAA 90 bp | CCAAACTCTGATCTTCATGCTTGTGGGGCAAACCCTACCCAAGAAGTCATCTCTCTGGTTCAGCCTGGCTaGACTTCTGGGCCATTCATC | + |
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Preference number: 3 (lower is better) Translates to: PNSDLHACGANPTQEVISLVQPG*TSGPFI Trigger: GATGAATGGCCCAGAAGTCAAGCCAGGCTGAACCAG...AGAGATGACTTCTTGGGTAGGGTTTGCCCCACAAGCATGAAGATCAGAGTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| 3UTR CCA 72 bp | ACAATGGGTGAGGGGATGATGTTGCAGAGGCAGCACTaGCACACAACCCTGACTACAAATCATAGGGCTAGA | + |
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Preference number: 3 (lower is better) Translates to: TMGEGMMLQRQH*HTTLTTNHRAR Trigger: TCTAGCCCTATGATTTGTAGTCAGGGTTGTGTGCCAGTGCTGCCTCTGCAACATCATCCCCTCACCCATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| 3UTR GCA 72 bp | ATCCAATGCCATGGCTACATCATTTATTGGTACTTATaGCATGCAGTGGTTGTGTCATCTCTAGACTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: IQCHGYIIYWYL*HAVVVSSLDFP Trigger: AGGGAAGTCTAGAGATGACACAACCACTGCATGGCATAAGTACCAATAAATGATGTAGCCATGGCATTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| 3UTR GCA 72 bp | ATGCCATGGCTACATCATTTATTGGTACTTATGCCATaGAGTGGTTGTGTCATCTCTAGACTTCCCTTACAA | + |
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Preference number: 3 (lower is better) Translates to: MPWLHHLLVLMP*SGCVISRLPLQ Trigger: TTGTAAGGGAAGTCTAGAGATGACACAACCACTGCATGGCATAAGTACCAATAAATGATGTAGCCATGGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| 3UTR TCA 72 bp | CCAACCATTTATTTTCAGTCACAATCTTCATCCTTATaGGGTCCAAAGGCTTTGAGAAGTACAATGGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: PTIYFQSQSSSL*GPKALRSTMGE Trigger: CTCACCCATTGTACTTCTCAAAGCCTTTGGACCTCATAAGGATGAAGATTGTGACTGAAAATAAATGGTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| 3UTR CCA 72 bp | ATTACAGTTATCCAATGCCATGGCTACATCATTTATTaGTACTTATGCCATGCAGTGGTTGTGTCATCTCTA | + |
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Preference number: 3 (lower is better) Translates to: ITVIQCHGYIIY*YLCHAVVVSSL Trigger: TAGAGATGACACAACCACTGCATGGCATAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| 3UTR CCA 72 bp | AATCAAGACAGACCTTATTACAGTTATCCAATGCCATaGCTACATCATTTATTGGTACTTATGCCATGCAGT | + |
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Preference number: 3 (lower is better) Translates to: NQDRPYYSYPMP*LHHLLVLMPCS Trigger: ACTGCATGGCATAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGTCTTGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| CDS-3UTR GCA 90 bp | CTCTCCCCTCTGGTTCAGCCTGGCTTGACTTCTGGGCCATTCATCATCTTGCCGGTCTGCAGGTGCCGCTaGACTTCCCCAGGCGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LSPLVQPGLTSGPFIILPVCRCR*TSPGVG Trigger: CCCCACGCCTGGGGAAGTGCAGCGGCACCTGCAGAC...CGGCAAGATGATGAATGGCCCAGAAGTCAAGCCAGGCTGAACCAGAGGGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| 3UTR CAA 72 bp | GCCCACGTCCGCCTCTCCCCTCTGGTTCAGCCTGGCTaGACTTCTGGGCCATTCATCATCTTGCCGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: AHVRLSPLVQPG*TSGPFIILPSA Trigger: TGCAGACGGCAAGATGATGAATGGCCCAGAAGTCAAGCCAGGCTGAACCAGAGGGGAGAGGCGGACGTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| CDS-3UTR CCA 90 bp | AAACCAAAAGTGGCTGCATTACTAGCCACTCTGAGCCACACTGGGATCCTCGGTGCACTTCCCCAGGCGTaGGGCTGGCCCCTAGGCACC | + |
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Preference number: 4 (lower is better) Translates to: KPKVAALLATLSHTGILGALPQA*GWPLGT Trigger: GGTGCCTAGGGGCCAGCCCCACGCCTGGGGAAGTGC...ACCGAGGATCCCAGTGTGGCTCAGAGTGGCTAGTAATGCAGCCACTTTTGGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| 3UTR CAA 72 bp | GCCACTCTGAGCCACACTGGGATCCTCGGTGAGAGCTaGAACGAAGTGAACCCTGGCAGATGCCGGGACTGT | + |
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Preference number: 4 (lower is better) Translates to: ATLSHTGILGES*NEVNPGRCRDC Trigger: ACAGTCCCGGCATCTGCCAGGGTTCACTTCGTTCAAGCTCTCACCGAGGATCCCAGTGTGGCTCAGAGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| CDS-3UTR TCA 90 bp | CTAGCCACTCTGAGCCACACTGGGATCCTCGGTGAGAGCTTGAACGAAGTGAACTTCTTGTCTATCCCATaGGTCTGCAGGTGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LATLSHTGILGESLNEVNFLSIP*VCRCRC Trigger: GCAGCGGCACCTGCAGACTCATGGGATAGACAAGAA...GTTCACTTCGTTCAAGCTCTCACCGAGGATCCCAGTGTGGCTCAGAGTGGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| CDS-3UTR GCA 90 bp | GTTCAGCCTGGCTTGACTTCTGGGCCATTCATCATCTTGCCGTCTGCACAGCCTTTGATCTTCCCTCTCTaGTGCTTGTCGTACAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: VQPGLTSGPFIILPSAQPLIFPL*CLSYRE Trigger: CTCCCTGTACGACAAGCAGCAGAGAGGGAAGATCAA...AGGCTGTGCAGACGGCAAGATGATGAATGGCCCAGAAGTCAAGCCAGGCTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| CDS-3UTR TCA 90 bp | AAACCAAAAGTGGCTGCATTACTAGCCACTCTGAGCCACACTGGGATCCTCGGTGAAGATCTGTGGCCTTaGTCTTCCCTCTCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: KPKVAALLATLSHTGILGEDLWP*SSLSAA Trigger: AGCAGCAGAGAGGGAAGATCAAGGCCACAGATCTTC...ACCGAGGATCCCAGTGTGGCTCAGAGTGGCTAGTAATGCAGCCACTTTTGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| CDS-3UTR TCA 90 bp | AAGGCTTTGAGAAGTACAATGGGTGAGGGGATGATGTTGCAGAGGCAGCACTGGTCTCTCCCAGTTTCATaGGTTTCGACCGCAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: KALRSTMGEGMMLQRQHWSLPVS*VSTAAQ Trigger: CTGAGCTGCGGTCGAAACTCATGAAACTGGGAGAGA...CCAGTGCTGCCTCTGCAACATCATCCCCTCACCCATTGTACTTCTCAAAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| CDS-3UTR TCA 90 bp | AAACCAAAAGTGGCTGCATTACTAGCCACTCTGAGCCACACTGGGATCCTCGGTCTGGTACCTTCCTTGTaGGTGAGCTTCTCTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: KPKVAALLATLSHTGILGLVPSL*VSFSPS Trigger: ACTGGGAGAGAAGCTCACTCACAAGGAAGGTACCAG...ACCGAGGATCCCAGTGTGGCTCAGAGTGGCTAGTAATGCAGCCACTTTTGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| CDS-3UTR TCA 90 bp | AAGGCTTTGAGAAGTACAATGGGTGAGGGGATGATGTTGCAGAGGCAGCACTGGGCAGCTCAGACGCCATaGTGTAACCTTTCTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KALRSTMGEGMMLQRQHWAAQTP*CNLSSP Trigger: AGGAGAAGAAAGGTTACATCATGGCGTCTGAGCTGC...CCAGTGCTGCCTCTGCAACATCATCCCCTCACCCATTGTACTTCTCAAAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| CDS-3UTR TCA 90 bp | AAGGCTTTGAGAAGTACAATGGGTGAGGGGATGATGTTGCAGAGGCAGCACTGGCCACTTCCTTGTGAGTaGGCTTCTCTCCCAGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: KALRSTMGEGMMLQRQHWPLPCE*ASLPVS Trigger: TGAAACTGGGAGAGAAGCTCACTCACAAGGAAGTGG...CCAGTGCTGCCTCTGCAACATCATCCCCTCACCCATTGTACTTCTCAAAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| CDS-3UTR GCA 90 bp | AAGGCTTTGAGAAGTACAATGGGTGAGGGGATGATGTTGCAGAGGCAGCACTGGTTGATCTTCCCTCTCTaGTGCTTGTCGTACAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: KALRSTMGEGMMLQRQHWLIFPL*CLSYRE Trigger: CTCCCTGTACGACAAGCAGCAGAGAGGGAAGATCAA...CCAGTGCTGCCTCTGCAACATCATCCCCTCACCCATTGTACTTCTCAAAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034777.14 |
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| CDS-3UTR CCA 90 bp | GACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTATGCGCACTTCCCCAGGCGTaGGGCTGGCCCCTAGGCACC | + |
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Preference number: 4 (lower is better) Translates to: DLITVIQCHGYIIYWYLCALPQA*GWPLGT Trigger: GGTGCCTAGGGGCCAGCCCCACGCCTGGGGAAGTGC...GCATAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034777.14 |
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| 3UTR CAA 72 bp | AAGGCTTTGAGAAGTACAATGGGTGAGGGGATGATGTaGCAGAGGCAGCACTGGCACACAACCCTGACTACA | + |
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Preference number: 4 (lower is better) Translates to: KALRSTMGEGMM*QRQHWHTTLTT Trigger: TGTAGTCAGGGTTGTGTGCCAGTGCTGCCTCTGCAACATCATCCCCTCACCCATTGTACTTCTCAAAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| CDS-3UTR GCA 90 bp | TGCTTTGAAGTTGCCAACCATTTATTTTCAGTCACAATCTTCATCCTTATGAGGGTCTGCAGGTGCCGCTaGACTTCCCCAGGCGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: CFEVANHLFSVTIFILMRVCRCR*TSPGVG Trigger: CCCCACGCCTGGGGAAGTGCAGCGGCACCTGCAGAC...CCTCATAAGGATGAAGATTGTGACTGAAAATAAATGGTTGGCAACTTCAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034777.14 |
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| CDS-3UTR TCA 90 bp | AAGGCTTTGAGAAGTACAATGGGTGAGGGGATGATGTTGCAGAGGCAGCACTGGCAATGCCTGCTTCCTTaGAAAGATCATCCACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: KALRSTMGEGMMLQRQHWQCLLP*KDHPLP Trigger: AGGAAGTGGATGATCTTTTCAAGGAAGCAGGCATTG...CCAGTGCTGCCTCTGCAACATCATCCCCTCACCCATTGTACTTCTCAAAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| CDS-3UTR GCA 90 bp | GTTCAGCCTGGCTTGACTTCTGGGCCATTCATCATCTTGCCGTCTGCACAGCCTTTCTTTGGGTCCTCTTaGTTGATTTGCATATGCATG | + |
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Preference number: 4 (lower is better) Translates to: VQPGLTSGPFIILPSAQPFFGSS*LICICM Trigger: CATGCATATGCAAATCAAGCAAGAGGACCCAAAGAA...AGGCTGTGCAGACGGCAAGATGATGAATGGCCCAGAAGTCAAGCCAGGCTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| CDS-3UTR CCA 90 bp | AAGGCTTTGAGAAGTACAATGGGTGAGGGGATGATGTTGCAGAGGCAGCACTGGTTTCACTTGGCCGTTTaGTTCAATGCCTGCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: KALRSTMGEGMMLQRQHWFHLAV*FNACFL Trigger: AAGGAAGCAGGCATTGAACCAAACGGCCAAGTGAAA...CCAGTGCTGCCTCTGCAACATCATCCCCTCACCCATTGTACTTCTCAAAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| CDS-3UTR TCA 90 bp | CACACCAGTAAAGTTCTAAAACCAAAAGTGGCTGCATTACTAGCCACTCTGAGCTCTCTCCCAGTTTCATaGGTTTCGACCGCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTSKVLKPKVAALLATLSSLPVS*VSTAAQ Trigger: CTGAGCTGCGGTCGAAACTCATGAAACTGGGAGAGA...GCTCAGAGTGGCTAGTAATGCAGCCACTTTTGGTTTTAGAACTTTACTGGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
||
| CDS-3UTR TCA 90 bp | GATAAACGTGTCATATTTCACTTGGCCGTTTGGTTCAATGCCTGCTTCCTTGAATCTCTCCCAGTTTCATaGGTTTCGACCGCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DKRVIFHLAVWFNACFLESLPVS*VSTAAQ Trigger: CTGAGCTGCGGTCGAAACTCATGAAACTGGGAGAGA...TTCAAGGAAGCAGGCATTGAACCAAACGGCCAAGTGAAATATGACACGTTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214633.2 |
||
| CDS-3UTR TCA 90 bp | CACTTGGCCGTTTGGTTCAATGCCTGCTTCCTTGAAAAGATCATCCACTGCAATCACATTACTTCCTTGTaGGTGAGCTTCTCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLAVWFNACFLEKIIHCNHITSL*VSFSPS Trigger: ACTGGGAGAGAAGCTCACTCACAAGGAAGTAATGTG...ATTGCAGTGGATGATCTTTTCAAGGAAGCAGGCATTGAACCAAACGGCCAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214633.2 |
||
| CDS-3UTR TCA 90 bp | CTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTATGCCATTTCTTGTCTATCCCATaGGTCTGCAGGTGCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LITVIQCHGYIIYWYLCHFLSIP*VCRCRC Trigger: GCAGCGGCACCTGCAGACTCATGGGATAGACAAGAA...ATGGCATAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034777.14 |
||
| CDS-3UTR TCA 90 bp | GACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTTCTCTCCCAGTTTCATaGGTTTCGACCGCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DRPYYSYPMPWLHHLLVLSLPVS*VSTAAQ Trigger: CTGAGCTGCGGTCGAAACTCATGAAACTGGGAGAGA...AAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
||
| 3UTR CAA 72 bp | AATGGTGATCCTCTGGATAAACGTGTCATATTTCACTaGGCCGTTTGGTTCAATGCCTGCTTCCTTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NGDPLDKRVIFH*AVWFNACFLEK Trigger: CTTTTCAAGGAAGCAGGCATTGAACCAAACGGCCAAGTGAAATATGACACGTTTATCCAGAGGATCACCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214633.2 |
||
| CDS-3UTR TCA 90 bp | ACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTAGAAGATCTGTGGCCTTaGTCTTCCCTCTCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDLITVIQCHGYIIYWYLEDLWP*SSLSAA Trigger: AGCAGCAGAGAGGGAAGATCAAGGCCACAGATCTTC...TAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034777.14 |
||
| CDS-3UTR TCA 90 bp | GACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTATGCCCACTTCCTTGTGAGTaGGCTTCTCTCCCAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLITVIQCHGYIIYWYLCPLPCE*ASLPVS Trigger: TGAAACTGGGAGAGAAGCTCACTCACAAGGAAGTGG...GCATAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTTGAAGTTGCCAACCATTTATTTTCAGTCACAATCTTCATCCTTATGAGGTCATCCACTTCCTTGTaGGTGAGCTTCTCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CFEVANHLFSVTIFILMRSSTSL*VSFSPS Trigger: ACTGGGAGAGAAGCTCACTCACAAGGAAGTGGATGA...CCTCATAAGGATGAAGATTGTGACTGAAAATAAATGGTTGGCAACTTCAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034777.14 |
||
| CDS-3UTR TCA 90 bp | GACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTTCATCCACTTCCTTGTaGGTGAGCTTCTCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DRPYYSYPMPWLHHLLVLSSTSL*VSFSPS Trigger: ACTGGGAGAGAAGCTCACTCACAAGGAAGTGGATGA...AAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
||
| CDS-3UTR TCA 90 bp | ATAAACGTGTCATATTTCACTTGGCCGTTTGGTTCAATGCCTGCTTCCTTGAAATTACTTCCTTGTGAGTaGGCTTCTCTCCCAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: INVSYFTWPFGSMPASLKLLPCE*ASLPVS Trigger: TGAAACTGGGAGAGAAGCTCACTCACAAGGAAGTAA...TTTCAAGGAAGCAGGCATTGAACCAAACGGCCAAGTGAAATATGACACGTTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214633.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCCCCTATCTTGGGGCTATGTCTTTGACATTGTGACACATTATCACCTATTGTACTCATTAATTTaGTCCTGGGAAAGGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQPLSWGYVFDIVTHYHLLYSLI*SWERNL Trigger: CAAGTTCCTTTCCCAGGACCAAATTAATGAGTACAA...TAGGTGATAATGTGTCACAATGTCAAAGACATAGCCCCAAGATAGGGGCTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
||
| CDS-3UTR TCA 90 bp | CTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTATGCCATCCACTTCCTTGTGAGTaGGCTTCTCTCCCAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LITVIQCHGYIIYWYLCHPLPCE*ASLPVS Trigger: TGAAACTGGGAGAGAAGCTCACTCACAAGGAAGTGG...ATGGCATAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
||
| CDS-3UTR TCA 90 bp | CTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTATGCCATTCATCCACTTCCTTGTaGGTGAGCTTCTCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LITVIQCHGYIIYWYLCHSSTSL*VSFSPS Trigger: ACTGGGAGAGAAGCTCACTCACAAGGAAGTGGATGA...ATGGCATAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
||
| CDS-3UTR GCA 90 bp | AATGGTGATCCTCTGGATAAACGTGTCATATTTCACTTGGCCGTTTGGTTCAATTTCTTTGGGTCCTCTTaGTTGATTTGCATATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: NGDPLDKRVIFHLAVWFNFFGSS*LICICM Trigger: CATGCATATGCAAATCAAGCAAGAGGACCCAAAGAA...ATTGAACCAAACGGCCAAGTGAAATATGACACGTTTATCCAGAGGATCACCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214633.2 |
||
| CDS-3UTR CCA 90 bp | GACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTATGCTGTCTGCCATCAGCATaGCCAGAAGGATTTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DLITVIQCHGYIIYWYLCCLPSA*PEGFLS Trigger: AGAAAGAAATCCTTCTGGCCATGCTGATGGCAGACA...GCATAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
||
| CDS-3UTR CCA 90 bp | GACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTATGCTTTCACTTGGCCGTTTaGTTCAATGCCTGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DLITVIQCHGYIIYWYLCFHLAV*FNACFL Trigger: AAGGAAGCAGGCATTGAACCAAACGGCCAAGTGAAA...GCATAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
||
| CDS-3UTR CCA 90 bp | GATAAACGTGTCATATTTCACTTGGCCGTTTGGTTCAATGCCTGCTTCCTTGAATTCTTGTCATTAATTTaGTCCTGGGAAAGGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: DKRVIFHLAVWFNACFLEFLSLI*SWERNL Trigger: CAAGTTCCTTTCCCAGGACCAAATTAATGACAAGAA...TTCAAGGAAGCAGGCATTGAACCAAACGGCCAAGTGAAATATGACACGTTTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214633.2 |
||
| CDS-3UTR TCA 90 bp | ACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTACAATGCCTGCTTCCTTaGAAAGATCATCCACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDLITVIQCHGYIIYWYLQCLLP*KDHPLP Trigger: AGGAAGTGGATGATCTTTTCAAGGAAGCAGGCATTG...TAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTTGAAGTTGCCAACCATTTATTTTCAGTCACAATCTTCATCCTTATGAGGTGCTTGATTTGCATATaGATGATGGTCAGGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CFEVANHLFSVTIFILMRCLICI*MMVRKV Trigger: CACCTTCCTGACCATCATGCATATGCAAATCAAGCA...CCTCATAAGGATGAAGATTGTGACTGAAAATAAATGGTTGGCAACTTCAAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034777.14 |
||
| 3UTR CAA 72 bp | TATTACAGTTATCCAATGCCATGGCTACATCATTTATaGGTACTTATGCCATGCAGTGGTTGTGTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YYSYPMPWLHHL*VLMPCSGCVIS Trigger: AGAGATGACACAACCACTGCATGGCATAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
||
| CDS-3UTR GCA 90 bp | GACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTGTTTGGTTCAATGCCTaGTTCCTTGAAAAGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: DRPYYSYPMPWLHHLLVLVWFNA*FLEKII Trigger: GATGATCTTTTCAAGGAAGCAGGCATTGAACCAAAC...AAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
||
| CDS-3UTR GCA 90 bp | ACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTATTCTTTGGGTCCTCTTaGTTGATTTGCATATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TDLITVIQCHGYIIYWYLFFGSS*LICICM Trigger: CATGCATATGCAAATCAAGCAAGAGGACCCAAAGAA...TAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 |
||
| CDS-3UTR GCA 90 bp | ACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTAGTTTGGTTCAATGCCTaGTTCCTTGAAAAGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: TDLITVIQCHGYIIYWYLVWFNA*FLEKII Trigger: GATGATCTTTTCAAGGAAGCAGGCATTGAACCAAAC...TAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
||
| CDS-3UTR CCA 90 bp | GACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTTTGTACTCATTAATTTaGTCCTGGGAAAGGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRPYYSYPMPWLHHLLVLLYSLI*SWERNL Trigger: CAAGTTCCTTTCCCAGGACCAAATTAATGAGTACAA...AAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034777.14 |
||
| CDS-3UTR CCA 90 bp | GACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTTTCTTGTCATTAATTTaGTCCTGGGAAAGGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRPYYSYPMPWLHHLLVLFLSLI*SWERNL Trigger: CAAGTTCCTTTCCCAGGACCAAATTAATGACAAGAA...AAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163820.3 |
||
| CDS CCA 90 bp | TGTCTATCCCATGAGTCTGCAGGTGCCGCTGCACTTCCCCAGGCGTaGGGCTGGCCCCTAGGCACCTCATGGACACCAGAAGATCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CLSHESAGAAALPQA*GWPLGTSWTPEDLW Trigger: CCACAGATCTTCTGGTGTCCATGAGGTGCCTAGGGGCCAGCCCCACGCCTGGGGAAGTGCAGCGGCACCTGCAGACTCATGGGATAGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034777.14 ENSMUST00000215870.2 |
||
| CDS TCA 90 bp | CCACGGTTCCCTCGCTCAGAGCCCACCAGGCTGGTACCTTCCTTGTaGGTGAGCTTCTCTCCCAGTTTCATGAGTTTCGACCGCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRFPRSEPTRLVPSL*VSFSPSFMSFDRSS Trigger: TGAGCTGCGGTCGAAACTCATGAAACTGGGAGAGAAGCTCACTCACAAGGAAGGTACCAGCCTGGTGGGCTCTGAGCGAGGGAACCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCCCCTCTGGTTCAGCCTGGCTTGACTTCTGGGCCATTCATCATCTTGCCGTTCCCTCTCTGCTGCTaGTCGTACAGGGAGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LSPLVQPGLTSGPFIILPFPLCC*SYREKH Trigger: GTGCTTCTCCCTGTACGACAAGCAGCAGAGAGGGAA...CGGCAAGATGATGAATGGCCCAGAAGTCAAGCCAGGCTGAACCAGAGGGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
||
| CDS-3UTR CAA 90 bp | TTGAACGAAGTGAACCCTGGCAGATGCCGGGACTGTCTCAGAGCTGACCCTCTCAGGGAGAAGCACTCCTaGTACTCATTAATTTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LNEVNPGRCRDCLRADPLREKHS*YSLIWS Trigger: GGACCAAATTAATGAGTACAAGGAGTGCTTCTCCCT...GAGAGGGTCAGCTCTGAGACAGTCCCGGCATCTGCCAGGGTTCACTTCGTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
||
| CDS-3UTR CAA 90 bp | AACGAAGTGAACCCTGGCAGATGCCGGGACTGTCTCAGAGCTGACCCTCTCCCCTTTCTTTGGGTCCTCTaGCTTGATTTGCATATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: NEVNPGRCRDCLRADPLPFLWVL*LDLHMH Trigger: ATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAA...GGGGAGAGGGTCAGCTCTGAGACAGTCCCGGCATCTGCCAGGGTTCACTTCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
||
| CDS GCA 90 bp | CGACCGCAGCTCAGACGCCATGATGTAACCTTTCTTCTCCTTGTCTaGCATCAGCATGGCCAGAAGGATTTCTTTCTTTGGGTCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RPQLRRHDVTFLLLV*HQHGQKDFFLWVLL Trigger: CAAGAGGACCCAAAGAAAGAAATCCTTCTGGCCATGCTGATGGCAGACAAGGAGAAGAAAGGTTACATCATGGCGTCTGAGCTGCGGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 ENSMUST00000214633.2 ENSMUST00000215870.2 ENSMUST00000215968.2 |
||
| CDS GCA 90 bp | CTCATGGACACCAGAAGATCTGTGGCCTTGATCTTCCCTCTCTGCTaGTTGTCGTACAGGGAGAAGCACTCCTTGTACTCATTAATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LMDTRRSVALIFPLC*LSYREKHSLYSLIW Trigger: CCAAATTAATGAGTACAAGGAGTGCTTCTCCCTGTACGACAAGCAGCAGAGAGGGAAGATCAAGGCCACAGATCTTCTGGTGTCCATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034777.14 ENSMUST00000215870.2 |
||
| CDS GCA 90 bp | CACCTCATGGACACCAGAAGATCTGTGGCCTTGATCTTCCCTCTCTaGTGCTTGTCGTACAGGGAGAAGCACTCCTTGTACTCATTAATT | + |
|
Preference number: 5 (lower is better) Translates to: HLMDTRRSVALIFPL*CLSYREKHSLYSLI Trigger: AATTAATGAGTACAAGGAGTGCTTCTCCCTGTACGACAAGCAGCAGAGAGGGAAGATCAAGGCCACAGATCTTCTGGTGTCCATGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034777.14 ENSMUST00000215870.2 |
||
| CDS GCA 90 bp | AGCATGGCCAGAAGGATTTCTTTCTTTGGGTCCTCTTGCTTGATTTaGATATGCATGATGGTCAGGAAGGTGGAGAAGTCCAGCTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SMARRISFFGSSCLI*ICMMVRKVEKSSSP Trigger: CGGAGAGCTGGACTTCTCCACCTTCCTGACCATCATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAAGAAATCCTTCTGGCCATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000214633.2 ENSMUST00000215870.2 ENSMUST00000215968.2 |
||
| CDS-3UTR CAA 90 bp | AAACCAAAAGTGGCTGCATTACTAGCCACTCTGAGCCACACTGGGATCCTCGGTGTCCTCTTGCTTGATTaGCATATGCATGATGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KPKVAALLATLSHTGILGVLLLD*HMHDGQ Trigger: CTGACCATCATGCATATGCAAATCAAGCAAGAGGAC...ACCGAGGATCCCAGTGTGGCTCAGAGTGGCTAGTAATGCAGCCACTTTTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCTTTGAGAAGTACAATGGGTGAGGGGATGATGTTGCAGAGGCAGCACTGGTCAATGCCTGCTTCCTaGAAAAGATCATCCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KALRSTMGEGMMLQRQHWSMPAS*KRSSTS Trigger: GGAAGTGGATGATCTTTTCAAGGAAGCAGGCATTGA...CCAGTGCTGCCTCTGCAACATCATCCCCTCACCCATTGTACTTCTCAAAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
||
| CDS GCA 90 bp | GCCAGAAGGATTTCTTTCTTTGGGTCCTCTTGCTTGATTTGCATATaGATGATGGTCAGGAAGGTGGAGAAGTCCAGCTCTCCGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ARRISFFGSSCLICI*MMVRKVEKSSSPFL Trigger: CAAGAACGGAGAGCTGGACTTCTCCACCTTCCTGACCATCATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAAGAAATCCTTCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000214633.2 ENSMUST00000215870.2 ENSMUST00000215968.2 |
||
| CDS GCA 90 bp | TCTGCCATCAGCATGGCCAGAAGGATTTCTTTCTTTGGGTCCTCTTaGTTGATTTGCATATGCATGATGGTCAGGAAGGTGGAGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAISMARRISFFGSS*LICICMMVRKVEKS Trigger: GGACTTCTCCACCTTCCTGACCATCATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAAGAAATCCTTCTGGCCATGCTGATGGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000214633.2 ENSMUST00000215870.2 ENSMUST00000215968.2 |
||
| CDS GCA 90 bp | CTGGATAAACGTGTCATATTTCACTTGGCCGTTTGGTTCAATGCCTaGTTCCTTGAAAAGATCATCCACTTCCTTGTGAGTGAGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LDKRVIFHLAVWFNA*FLEKIIHFLVSELL Trigger: GAGAAGCTCACTCACAAGGAAGTGGATGATCTTTTCAAGGAAGCAGGCATTGAACCAAACGGCCAAGTGAAATATGACACGTTTATCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 ENSMUST00000215968.2 |
||
| CDS-3UTR CAA 90 bp | TGCTTTGAAGTTGCCAACCATTTATTTTCAGTCACAATCTTCATCCTTATGAGGTTCCCTCTCTGCTGCTaGTCGTACAGGGAGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CFEVANHLFSVTIFILMRFPLCC*SYREKH Trigger: GTGCTTCTCCCTGTACGACAAGCAGCAGAGAGGGAA...CCTCATAAGGATGAAGATTGTGACTGAAAATAAATGGTTGGCAACTTCAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034777.14 |
||
| CDS-3UTR CAA 90 bp | CACTTGGCCGTTTGGTTCAATGCCTGCTTCCTTGAAAAGATCATCCACTGCAATTTTCTTTGGGTCCTCTaGCTTGATTTGCATATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HLAVWFNACFLEKIIHCNFLWVL*LDLHMH Trigger: ATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAA...ATTGCAGTGGATGATCTTTTCAAGGAAGCAGGCATTGAACCAAACGGCCAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214633.2 |
||
| CDS-3UTR CAA 90 bp | CTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTATGCCATAGAAGATCTGTGGCCTaGATCTTCCCTCTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LITVIQCHGYIIYWYLCHRRSVA*IFPLCC Trigger: GCAGCAGAGAGGGAAGATCAAGGCCACAGATCTTCT...ATGGCATAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034777.14 |
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| CDS-3UTR CAA 90 bp | AATGGTGATCCTCTGGATAAACGTGTCATATTTCACTTGGCCGTTTGGTTCAATGTCCTCTTGCTTGATTaGCATATGCATGATGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: NGDPLDKRVIFHLAVWFNVLLLD*HMHDGQ Trigger: CTGACCATCATGCATATGCAAATCAAGCAAGAGGAC...ATTGAACCAAACGGCCAAGTGAAATATGACACGTTTATCCAGAGGATCACCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214633.2 |
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| CDS-3UTR CAA 90 bp | GACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTCGTGTCATATTTCACTaGGCCGTTTGGTTCAATGCC | + |
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Preference number: 5 (lower is better) Translates to: DRPYYSYPMPWLHHLLVLRVIFH*AVWFNA Trigger: GGCATTGAACCAAACGGCCAAGTGAAATATGACACG...AAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| CDS-3UTR CAA 90 bp | GACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTATGCCGTGTCATATTTCACTaGGCCGTTTGGTTCAATGCC | + |
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Preference number: 5 (lower is better) Translates to: DLITVIQCHGYIIYWYLCRVIFH*AVWFNA Trigger: GGCATTGAACCAAACGGCCAAGTGAAATATGACACG...GCATAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| CDS-3UTR CAA 90 bp | GACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTAGGGAGAAGCACTCCTaGTACTCATTAATTTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: DRPYYSYPMPWLHHLLVLREKHS*YSLIWS Trigger: GGACCAAATTAATGAGTACAAGGAGTGCTTCTCCCT...AAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034777.14 |
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| CDS-3UTR CAA 90 bp | TGCTTTGAAGTTGCCAACCATTTATTTTCAGTCACAATCTTCATCCTTATGAGGGTCCTCTTGCTTGATTaGCATATGCATGATGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: CFEVANHLFSVTIFILMRVLLLD*HMHDGQ Trigger: CTGACCATCATGCATATGCAAATCAAGCAAGAGGAC...CCTCATAAGGATGAAGATTGTGACTGAAAATAAATGGTTGGCAACTTCAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034777.14 |
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| CDS-3UTR CAA 90 bp | GACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTATGCGTCCTCTTGCTTGATTaGCATATGCATGATGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: DLITVIQCHGYIIYWYLCVLLLD*HMHDGQ Trigger: CTGACCATCATGCATATGCAAATCAAGCAAGAGGAC...GCATAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 |
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| CDS-3UTR CAA 90 bp | GACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTTCAATGCCTGCTTCCTaGAAAAGATCATCCACTTCC | + |
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Preference number: 5 (lower is better) Translates to: DRPYYSYPMPWLHHLLVLSMPAS*KRSSTS Trigger: GGAAGTGGATGATCTTTTCAAGGAAGCAGGCATTGA...AAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| CDS-3UTR CAA 90 bp | ACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTACGTGTCATATTTCACTaGGCCGTTTGGTTCAATGCC | + |
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Preference number: 5 (lower is better) Translates to: TDLITVIQCHGYIIYWYLRVIFH*AVWFNA Trigger: GGCATTGAACCAAACGGCCAAGTGAAATATGACACG...TAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| CDS-3UTR CAA 90 bp | ACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTATCAATGCCTGCTTCCTaGAAAAGATCATCCACTTCC | + |
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Preference number: 5 (lower is better) Translates to: TDLITVIQCHGYIIYWYLSMPAS*KRSSTS Trigger: GGAAGTGGATGATCTTTTCAAGGAAGCAGGCATTGA...TAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| CDS-3UTR CAA 90 bp | GACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTTTTCTTTGGGTCCTCTaGCTTGATTTGCATATGCAT | + |
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Preference number: 5 (lower is better) Translates to: DRPYYSYPMPWLHHLLVLFLWVL*LDLHMH Trigger: ATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAA...AAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| CDS-3UTR CAA 90 bp | ACAGACCTTATTACAGTTATCCAATGCCATGGCTACATCATTTATTGGTACTTATTTCTTTGGGTCCTCTaGCTTGATTTGCATATGCAT | + |
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Preference number: 5 (lower is better) Translates to: TDLITVIQCHGYIIYWYLFLWVL*LDLHMH Trigger: ATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAA...TAAGTACCAATAAATGATGTAGCCATGGCATTGGATAACTGTAATAAGGTCTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 |
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| CDS TCA 72 bp | CCTCGCTCAGAGCCCACCAGGCTGGTACCTTCCTTGTaGGTGAGCTTCTCTCCCAGTTTCATGAGTTTCGAC | + |
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Preference number: 6 (lower is better) Translates to: PRSEPTRLVPSL*VSFSPSFMSFD Trigger: GTCGAAACTCATGAAACTGGGAGAGAAGCTCACTCACAAGGAAGGTACCAGCCTGGTGGGCTCTGAGCGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215870.2 |
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| CDS GCA 72 bp | GACACCAGAAGATCTGTGGCCTTGATCTTCCCTCTCTaGTGCTTGTCGTACAGGGAGAAGCACTCCTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: DTRRSVALIFPL*CLSYREKHSLY Trigger: GTACAAGGAGTGCTTCTCCCTGTACGACAAGCAGCAGAGAGGGAAGATCAAGGCCACAGATCTTCTGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034777.14 ENSMUST00000215870.2 |
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| CDS CAA 90 bp | ATGGACACCAGAAGATCTGTGGCCTTGATCTTCCCTCTCTGCTGCTaGTCGTACAGGGAGAAGCACTCCTTGTACTCATTAATTTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: MDTRRSVALIFPLCC*SYREKHSLYSLIWS Trigger: GGACCAAATTAATGAGTACAAGGAGTGCTTCTCCCTGTACGACAAGCAGCAGAGAGGGAAGATCAAGGCCACAGATCTTCTGGTGTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034777.14 ENSMUST00000215870.2 |
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| CDS CAA 90 bp | CAGCATGGCCAGAAGGATTTCTTTCTTTGGGTCCTCTTGCTTGATTaGCATATGCATGATGGTCAGGAAGGTGGAGAAGTCCAGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QHGQKDFFLWVLLLD*HMHDGQEGGEVQLS Trigger: GGAGAGCTGGACTTCTCCACCTTCCTGACCATCATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAAGAAATCCTTCTGGCCATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000214633.2 ENSMUST00000215870.2 ENSMUST00000215968.2 |
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| CDS CAA 90 bp | GCCATCAGCATGGCCAGAAGGATTTCTTTCTTTGGGTCCTCTTGCTaGATTTGCATATGCATGATGGTCAGGAAGGTGGAGAAGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: AISMARRISFFGSSC*ICICMMVRKVEKSS Trigger: GCTGGACTTCTCCACCTTCCTGACCATCATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAAGAAATCCTTCTGGCCATGCTGATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000214633.2 ENSMUST00000215870.2 ENSMUST00000215968.2 |
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| CDS CAA 90 bp | GTCTGCCATCAGCATGGCCAGAAGGATTTCTTTCTTTGGGTCCTCTaGCTTGATTTGCATATGCATGATGGTCAGGAAGGTGGAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: VCHQHGQKDFFLWVL*LDLHMHDGQEGGEV Trigger: GACTTCTCCACCTTCCTGACCATCATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAAGAAATCCTTCTGGCCATGCTGATGGCAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000214633.2 ENSMUST00000215870.2 ENSMUST00000215968.2 |
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| CDS GCA 72 bp | AGCATGGCCAGAAGGATTTCTTTCTTTGGGTCCTCTTaGTTGATTTGCATATGCATGATGGTCAGGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SMARRISFFGSS*LICICMMVRKV Trigger: CACCTTCCTGACCATCATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAAGAAATCCTTCTGGCCATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000214633.2 ENSMUST00000215870.2 ENSMUST00000215968.2 |
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| CDS CAA 72 bp | ATGGCCAGAAGGATTTCTTTCTTTGGGTCCTCTTGCTaGATTTGCATATGCATGATGGTCAGGAAGGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: MARRISFFGSSC*ICICMMVRKVE Trigger: CTCCACCTTCCTGACCATCATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAAGAAATCCTTCTGGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000214633.2 ENSMUST00000215870.2 ENSMUST00000215968.2 |
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| CDS CAA 72 bp | CAGCATGGCCAGAAGGATTTCTTTCTTTGGGTCCTCTaGCTTGATTTGCATATGCATGATGGTCAGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: QHGQKDFFLWVL*LDLHMHDGQEG Trigger: ACCTTCCTGACCATCATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAAGAAATCCTTCTGGCCATGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000214633.2 ENSMUST00000215870.2 ENSMUST00000215968.2 |
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| CDS GCA 72 bp | ATTTCTTTCTTTGGGTCCTCTTGCTTGATTTGCATATaGATGATGGTCAGGAAGGTGGAGAAGTCCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ISFFGSSCLICI*MMVRKVEKSSS Trigger: AGAGCTGGACTTCTCCACCTTCCTGACCATCATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000214633.2 ENSMUST00000215870.2 ENSMUST00000215968.2 |
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| CDS GCA 72 bp | AGAAGGATTTCTTTCTTTGGGTCCTCTTGCTTGATTTaGATATGCATGATGGTCAGGAAGGTGGAGAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: RRISFFGSSCLI*ICMMVRKVEKS Trigger: GGACTTCTCCACCTTCCTGACCATCATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAAGAAATCCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000214633.2 ENSMUST00000215870.2 ENSMUST00000215968.2 |
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| CDS GCA 72 bp | CGTGTCATATTTCACTTGGCCGTTTGGTTCAATGCCTaGTTCCTTGAAAAGATCATCCACTTCCTTGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: RVIFHLAVWFNA*FLEKIIHFLVS Trigger: ACTCACAAGGAAGTGGATGATCTTTTCAAGGAAGCAGGCATTGAACCAAACGGCCAAGTGAAATATGACACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000213643.2 ENSMUST00000215968.2 |
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| CDS CAA 72 bp | CAGAAGGATTTCTTTCTTTGGGTCCTCTTGCTTGATTaGCATATGCATGATGGTCAGGAAGGTGGAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: QKDFFLWVLLLD*HMHDGQEGGEV Trigger: GACTTCTCCACCTTCCTGACCATCATGCATATGCAAATCAAGCAAGAGGACCCAAAGAAAGAAATCCTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034777.14 ENSMUST00000163820.3 ENSMUST00000214633.2 ENSMUST00000215870.2 ENSMUST00000215968.2 |
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