Pregenerated sensors for CALM5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000099269

Ensembl transcript IDs: ENSMUST00000183198.4, ENSMUST00000184271.2

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GAGATGAGAGCCTTCAGTTCCTCATGTGAGAGGTTCTTGCCCAACTaGTTCATTACATCTCCAAGTTCCTGGACGTTGATATGGCCATCC	+
Preference number: 5 (lower is better) Translates to: EMRAFSSSCERFLPN*FITSPSSWTLIWPS Trigger: GGATGGCCATATCAACGTCCAGGAACTTGGAGATGTAATGAAGCAGTTGGGCAAGAACCTCTCACATGAGGAACTGAAGGCTCTCATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184271.2
CDS CCA 90 bp	AAGCCTTCTTTGAGCTCATCCACAGTGATGTACCCATCACCATTCTaGTCAAGGACACTGAACATAGCCTGCAGCTCCTGCTCTTTAGTG	+
Preference number: 5 (lower is better) Translates to: KPSLSSSTVMYPSPF*SRTLNIACSSCSLV Trigger: CACTAAAGAGCAGGAGCTGCAGGCTATGTTCAGTGTCCTTGACCAGAATGGTGATGGGTACATCACTGTGGATGAGCTCAAAGAAGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183198.4 ENSMUST00000184271.2
CDS TCA 90 bp	ACCATCTGTGTCCAACTTGGAGATGAGAGCCTTCAGTTCCTCATGTaGGAGGTTCTTGCCCAACTGCTTCATTACATCTCCAAGTTCCTG	+
Preference number: 5 (lower is better) Translates to: TICVQLGDESLQFLM*EVLAQLLHYISKFL Trigger: CAGGAACTTGGAGATGTAATGAAGCAGTTGGGCAAGAACCTCTCACATGAGGAACTGAAGGCTCTCATCTCCAAGTTGGACACAGATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184271.2
CDS CCA 90 bp	TGTGAGAGGTTCTTGCCCAACTGCTTCATTACATCTCCAAGTTCCTaGACGTTGATATGGCCATCCTTATTCTCCTCCTTAGTAAACCCG	+
Preference number: 5 (lower is better) Translates to: CERFLPNCFITSPSS*TLIWPSLFSSLVNP Trigger: CGGGTTTACTAAGGAGGAGAATAAGGATGGCCATATCAACGTCCAGGAACTTGGAGATGTAATGAAGCAGTTGGGCAAGAACCTCTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184271.2
CDS GCA 90 bp	GTGATGTACCCATCACCATTCTGGTCAAGGACACTGAACATAGCCTaGAGCTCCTGCTCTTTAGTGTACTTTTTGATGGACTTAAAGAAT	+
Preference number: 5 (lower is better) Translates to: VMYPSPFWSRTLNIA*SSCSLVYFLMDLKN Trigger: ATTCTTTAAGTCCATCAAAAAGTACACTAAAGAGCAGGAGCTGCAGGCTATGTTCAGTGTCCTTGACCAGAATGGTGATGGGTACATCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000183198.4 ENSMUST00000184271.2
CDS GCA 90 bp	CCATCACCATTCTGGTCAAGGACACTGAACATAGCCTGCAGCTCCTaGTCTTTAGTGTACTTTTTGATGGACTTAAAGAATTCTTCAAAG	+
Preference number: 5 (lower is better) Translates to: PSPFWSRTLNIACSS*SLVYFLMDLKNSSK Trigger: CTTTGAAGAATTCTTTAAGTCCATCAAAAAGTACACTAAAGAGCAGGAGCTGCAGGCTATGTTCAGTGTCCTTGACCAGAATGGTGATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000183198.4 ENSMUST00000184271.2
CDS CAA 90 bp	AGCTCCTCCTGGGAAAGCGGCTCTCCCATCTTGGACAAGCCTTCTTaGAGCTCATCCACAGTGATGTACCCATCACCATTCTGGTCAAGG	+
Preference number: 6 (lower is better) Translates to: SSSWESGSPILDKPS*SSSTVMYPSPFWSR Trigger: CCTTGACCAGAATGGTGATGGGTACATCACTGTGGATGAGCTCAAAGAAGGCTTGTCCAAGATGGGAGAGCCGCTTTCCCAGGAGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183198.4 ENSMUST00000184271.2
CDS CAA 72 bp	TGGGAAAGCGGCTCTCCCATCTTGGACAAGCCTTCTTaGAGCTCATCCACAGTGATGTACCCATCACCATTC	+
Preference number: 6 (lower is better) Translates to: WESGSPILDKPS*SSSTVMYPSPF Trigger: GAATGGTGATGGGTACATCACTGTGGATGAGCTCAAAGAAGGCTTGTCCAAGATGGGAGAGCCGCTTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183198.4 ENSMUST00000184271.2
CDS TCA 72 bp	GTCCAACTTGGAGATGAGAGCCTTCAGTTCCTCATGTaGGAGGTTCTTGCCCAACTGCTTCATTACATCTCC	+
Preference number: 6 (lower is better) Translates to: VQLGDESLQFLM*EVLAQLLHYIS Trigger: GGAGATGTAATGAAGCAGTTGGGCAAGAACCTCTCACATGAGGAACTGAAGGCTCTCATCTCCAAGTTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184271.2
CDS CAA 72 bp	TCAAAGCTGATCTTGCCATCACCATCTGTGTCCAACTaGGAGATGAGAGCCTTCAGTTCCTCATGTGAGAGG	+
Preference number: 6 (lower is better) Translates to: SKLILPSPSVSN*EMRAFSSSCER Trigger: CCTCTCACATGAGGAACTGAAGGCTCTCATCTCCAAGTTGGACACAGATGGTGATGGCAAGATCAGCTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183198.4 ENSMUST00000184271.2
CDS CAA 72 bp	GTGACTCAAAAACTGCTCATAGTTCACCTTCCCATCTaGGTCTGCACCAAACACATGGATCATGCCCTCCAG	+
Preference number: 6 (lower is better) Translates to: VTQKLLIVHLPI*VCTKHMDHALQ Trigger: CTGGAGGGCATGATCCATGTGTTTGGTGCAGACCAAGATGGGAAGGTGAACTATGAGCAGTTTTTGAGTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000183198.4 ENSMUST00000184271.2
CDS CAA 72 bp	GAGATGAGAGCCTTCAGTTCCTCATGTGAGAGGTTCTaGCCCAACTGCTTCATTACATCTCCAAGTTCCTGG	+
Preference number: 6 (lower is better) Translates to: EMRAFSSSCERF*PNCFITSPSSW Trigger: CCAGGAACTTGGAGATGTAATGAAGCAGTTGGGCAAGAACCTCTCACATGAGGAACTGAAGGCTCTCATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184271.2
CDS CAA 90 bp	AAGAATTCTTCAAAGCTGATCTTGCCATCACCATCTGTGTCCAACTaGGAGATGAGAGCCTTCAGTTCCTCATGTGAGAGGTTCTTGCCC	+
Preference number: 6 (lower is better) Translates to: KNSSKLILPSPSVSN*EMRAFSSSCERFLP Trigger: GGGCAAGAACCTCTCACATGAGGAACTGAAGGCTCTCATCTCCAAGTTGGACACAGATGGTGATGGCAAGATCAGCTTTGAAGAATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183198.4 ENSMUST00000184271.2
CDS CAA 90 bp	TCCAACTTGGAGATGAGAGCCTTCAGTTCCTCATGTGAGAGGTTCTaGCCCAACTGCTTCATTACATCTCCAAGTTCCTGGACGTTGATA	+
Preference number: 6 (lower is better) Translates to: SNLEMRAFSSSCERF*PNCFITSPSSWTLI Trigger: TATCAACGTCCAGGAACTTGGAGATGTAATGAAGCAGTTGGGCAAGAACCTCTCACATGAGGAACTGAAGGCTCTCATCTCCAAGTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184271.2
CDS GCA 72 bp	GCCTTCAGTTCCTCATGTGAGAGGTTCTTGCCCAACTaGTTCATTACATCTCCAAGTTCCTGGACGTTGATA	+
Preference number: 6 (lower is better) Translates to: AFSSSCERFLPN*FITSPSSWTLI Trigger: TATCAACGTCCAGGAACTTGGAGATGTAATGAAGCAGTTGGGCAAGAACCTCTCACATGAGGAACTGAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184271.2
CDS CCA 72 bp	TTCTTGCCCAACTGCTTCATTACATCTCCAAGTTCCTaGACGTTGATATGGCCATCCTTATTCTCCTCCTTA	+
Preference number: 6 (lower is better) Translates to: FLPNCFITSPSS*TLIWPSLFSSL Trigger: TAAGGAGGAGAATAAGGATGGCCATATCAACGTCCAGGAACTTGGAGATGTAATGAAGCAGTTGGGCAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184271.2
CDS CAA 72 bp	CCCAACTGCTTCATTACATCTCCAAGTTCCTGGACGTaGATATGGCCATCCTTATTCTCCTCCTTAGTAAAC	+
Preference number: 6 (lower is better) Translates to: PNCFITSPSSWT*IWPSLFSSLVN Trigger: GTTTACTAAGGAGGAGAATAAGGATGGCCATATCAACGTCCAGGAACTTGGAGATGTAATGAAGCAGTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184271.2
CDS GCA 72 bp	TTCTGGTCAAGGACACTGAACATAGCCTGCAGCTCCTaGTCTTTAGTGTACTTTTTGATGGACTTAAAGAAT	+
Preference number: 6 (lower is better) Translates to: FWSRTLNIACSS*SLVYFLMDLKN Trigger: ATTCTTTAAGTCCATCAAAAAGTACACTAAAGAGCAGGAGCTGCAGGCTATGTTCAGTGTCCTTGACCAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000183198.4 ENSMUST00000184271.2
CDS CAA 90 bp	TTAGTGTACTTTTTGATGGACTTAAAGAATTCTTCAAAGCTGATCTaGCCATCACCATCTGTGTCCAACTTGGAGATGAGAGCCTTCAGT	+
Preference number: 6 (lower is better) Translates to: LVYFLMDLKNSSKLI*PSPSVSNLEMRAFS Trigger: ACTGAAGGCTCTCATCTCCAAGTTGGACACAGATGGTGATGGCAAGATCAGCTTTGAAGAATTCTTTAAGTCCATCAAAAAGTACACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000183198.4 ENSMUST00000184271.2
CDS CAA 72 bp	TTTTTGATGGACTTAAAGAATTCTTCAAAGCTGATCTaGCCATCACCATCTGTGTCCAACTTGGAGATGAGA	+
Preference number: 6 (lower is better) Translates to: FLMDLKNSSKLI*PSPSVSNLEMR Trigger: TCTCATCTCCAAGTTGGACACAGATGGTGATGGCAAGATCAGCTTTGAAGAATTCTTTAAGTCCATCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000183198.4 ENSMUST00000184271.2

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