Pregenerated sensors for CALM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001175Ensembl transcript IDs: ENSMUST00000001204.8, ENSMUST00000110082.11
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGTTAGCCCCGAGTGCACCCACGTGGTTGCCAAGGGCTTCTCATTaGCTTGCTAGAAGCCTGCAGCTCCGACACCCCCGAACTTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: RLAPSAPTWLPRASH*LARSLQLRHPRTWK Trigger: CTTCCAAGTTCGGGGGTGTCGGAGCTGCAGGCTTCTAGCAAGGCAATGAGAAGCCCTTGGCAACCACGTGGGTGCACTCGGGGCTAACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR GCA 90 bp | GGTACTGCCTTGACACCCCACTCTTTCTATCTCACGAACTCAAACTaGCAACACCAAGCCCTGGGCTGCCTGTGCCCCAGGATGCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: GTALTPHSFYLTNSN*QHQALGCLCPRMPE Trigger: TTCTGGCATCCTGGGGCACAGGCAGCCCAGGGCTTGGTGTTGGCAGTTTGAGTTCGTGAGATAGAAAGAGTGGGGTGTCAAGGCAGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR GCA 90 bp | TGGTTTCAGGAGTTGTGGCTAGAGAACCTGGTGGGAAATCCAGCTTaGACTGGATGTTGCGTGTCTCTGTGTATGCTGACCTCCCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: WFQELWLENLVGNPA*TGCCVSLCMLTSPP Trigger: TGGAGGGGAGGTCAGCATACACAGAGACACGCAACATCCAGTGCAAGCTGGATTTCCCACCAGGTTCTCTAGCCACAACTCCTGAAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR CCA 90 bp | TCTCATTGCCTTGCTAGAAGCCTGCAGCTCCGACACCCCCGAACTTaGAAGCCAAAGCTCCTTGCTAGTCAGATACAACCAGTTAACACC | + |
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Preference number: 1 (lower is better) Translates to: SHCLARSLQLRHPRT*KPKLLASQIQPVNT Trigger: GGTGTTAACTGGTTGTATCTGACTAGCAAGGAGCTTTGGCTTCCAAGTTCGGGGGTGTCGGAGCTGCAGGCTTCTAGCAAGGCAATGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR TCA 90 bp | GGACAGTTTACAGGAAAGTGTTATCTGACCTCAGGGGTACTGCCTTaGCACCCCACTCTTTCTATCTCACGAACTCAAACTGCCAACACC | + |
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Preference number: 1 (lower is better) Translates to: GQFTGKCYLTSGVLP*HPTLSISRTQTANT Trigger: GGTGTTGGCAGTTTGAGTTCGTGAGATAGAAAGAGTGGGGTGTCAAGGCAGTACCCCTGAGGTCAGATAACACTTTCCTGTAAACTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR TCA 90 bp | GATTTACACAACGTCCAAGTACAACTCTTTGTCAAACAGCCACAGTaGAGGGTGACTTCGGTAACAGAAGGACCACCACCATCCTTGCTA | + |
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Preference number: 1 (lower is better) Translates to: DLHNVQVQLFVKQPQ*RVTSVTEGPPPSLL Trigger: TAGCAAGGATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACAAAGAGTTGTACTTGGACGTTGTGTAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR CCA 90 bp | AAACTTATTTACAATTTCCATAGAGTTGGTCCCCCGTCAGAGAGGTaGTTAAATCTCCAAAACAGTTTATCTCAAGATTTACACAACGTC | + |
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Preference number: 1 (lower is better) Translates to: KLIYNFHRVGPPSER*LNLQNSLSQDLHNV Trigger: GACGTTGTGTAAATCTTGAGATAAACTGTTTTGGAGATTTAACCACCTCTCTGACGGGGGACCAACTCTATGGAAATTGTAAATAAGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCGCCCTGGGCTGCCTGTaGCCCAGGATGCCAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: CQTATVKGDFGNRRTTTIALGCL*PRMPEG Trigger: GCCTTCTGGCATCCTGGGGCACAGGCAGCCCAGGGC...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR CAA 90 bp | GTTGTGGCTAGAGAACCTGGTGGGAAATCCAGCTTGCACTGGATGTaGCGTGTCTCTGTGTATGCTGACCTCCCCTCCAGCGGCCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: VVAREPGGKSSLHWM*RVSVYADLPSSGLG Trigger: GCCAAGGCCGCTGGAGGGGAGGTCAGCATACACAGAGACACGCAACATCCAGTGCAAGCTGGATTTCCCACCAGGTTCTCTAGCCACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR TCA 90 bp | TTCTATCTCACGAACTCAAACTGCCAACACCAAGCCCTGGGCTGCCTGTGCCCCCACCCAGTCCAAGGATaGGCAGAGGTGCTCAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: FYLTNSNCQHQALGCLCPHPVQG*AEVLRQ Trigger: TTGCCTGAGCACCTCTGCTCATCCTTGGACTGGGTG...GGGGCACAGGCAGCCCAGGGCTTGGTGTTGGCAGTTTGAGTTCGTGAGATAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | TTCTATCTCACGAACTCAAACTGCCAACACCAAGCCCTGGGCTGCCTGTGCCCCTGTCTTCCTCTCTACTaGTCGGACCCATCCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: FYLTNSNCQHQALGCLCPCLPLY*SDPSLW Trigger: CCAGAGGGATGGGTCCGAGCAGTAGAGAGGAAGACA...GGGGCACAGGCAGCCCAGGGCTTGGTGTTGGCAGTTTGAGTTCGTGAGATAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | AGCAGAGGTGCTCAGGCAATGTCTTCCTCTCTACTGCTCGGACCCATCCCTCTGCCAAGGGCTTCTCATTaGCTTGCTAGAAGCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: SRGAQAMSSSLLLGPIPLPRASH*LARSLQ Trigger: CTGCAGGCTTCTAGCAAGGCAATGAGAAGCCCTTGG...CAGAGGGATGGGTCCGAGCAGTAGAGAGGAAGACATTGCCTGAGCACCTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR TCA 90 bp | AGCAGAGGTGCTCAGGCAATGTCTTCCTCTCTACTGCTCGGACCCATCCCTCTGACCAGGGCTCTAGTCTaGACATCACCTGACTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: SRGAQAMSSSLLLGPIPLTRALV*TSPDCD Trigger: ATCACAGTCAGGTGATGTTCAGACTAGAGCCCTGGT...CAGAGGGATGGGTCCGAGCAGTAGAGAGGAAGACATTGCCTGAGCACCTCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | TTCTATCTCACGAACTCAAACTGCCAACACCAAGCCCTGGGCTGCCTGTGCCCCCCTTCCCCCATTCTCTaGACATCAATCATCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: FYLTNSNCQHQALGCLCPPSPIL*TSIILR Trigger: CCTCAGGATGATTGATGTGCAGAGAATGGGGGAAGG...GGGGCACAGGCAGCCCAGGGCTTGGTGTTGGCAGTTTGAGTTCGTGAGATAGAA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | AGCAGAGGTGCTCAGGCAATGTCTTCCTCTCTACTGCTCGGACCCATCCCTCTGCACCTGACTGTGATCTaGGCATGTGCACACAACACA | + |
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Preference number: 2 (lower is better) Translates to: SRGAQAMSSSLLLGPIPLHLTVI*ACAHNT Trigger: TGTGTTGTGTGCACATGCGCAGATCACAGTCAGGTG...CAGAGGGATGGGTCCGAGCAGTAGAGAGGAAGACATTGCCTGAGCACCTCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCGTGCACCCACGTGGTTaGCAAGGGCTTCTCATTGCC | + |
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Preference number: 2 (lower is better) Translates to: CQTATVKGDFGNRRTTTIVHPRG*QGLLIA Trigger: GGCAATGAGAAGCCCTTGGCAACCACGTGGGTGCAC...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR CAA 90 bp | GGATGTTGCGTGTCTCTGTGTATGCTGACCTCCCCTCCAGCGGCCTaGGCCTTGTCCCCCTTCCAATCTCAGCTTTACAAAGCATTTAAC | + |
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Preference number: 2 (lower is better) Translates to: GCCVSLCMLTSPPAA*ALSPFQSQLYKAFN Trigger: GTTAAATGCTTTGTAAAGCTGAGATTGGAAGGGGGACAAGGCCAAGGCCGCTGGAGGGGAGGTCAGCATACACAGAGACACGCAACATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR TCA 90 bp | TCATGTCTCCCGCACAGATGGCCTCATGTAGTTACAACAGGTCAGCAGCAGCACGGACAGAGGGGCTTCTaGCATTCAGCTTCGCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: SCLPHRWPHVVTTGQQQHGQRGF*HSASLD Trigger: ATCTAGCGAAGCTGAATGTCAGAAGCCCCTCTGTCC...GTGCTGCTGCTGACCTGTTGTAACTACATGAGGCCATCTGTGCGGGAGACATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | AGCAGAGGTGCTCAGGCAATGTCTTCCTCTCTACTGCTCGGACCCATCCCTCTGAATCATCAAGCTGCATaGATGAGAAACTGGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: SRGAQAMSSSLLLGPIPLNHQAA*MRNWPA Trigger: GGCTGGCCAGTTTCTCATGCATGCAGCTTGATGATT...CAGAGGGATGGGTCCGAGCAGTAGAGAGGAAGACATTGCCTGAGCACCTCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCTGTCTTCCTCTCTACTaGTCGGACCCATCCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: CQTATVKGDFGNRRTTTICLPLY*SDPSLW Trigger: CCAGAGGGATGGGTCCGAGCAGTAGAGAGGAAGACA...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGGTGCTCAGGCAATGTCTTCCTCTCTACTGCTCGGACCCATCCCTCTGAACTCCGAGTCTGTCTaGTTTCAGGAGTTGTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: SRGAQAMSSSLLLGPIPLNSESV*FQELWL Trigger: TAGCCACAACTCCTGAAACCAGACAGACTCGGAGTT...CAGAGGGATGGGTCCGAGCAGTAGAGAGGAAGACATTGCCTGAGCACCTCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGGTGCTCAGGCAATGTCTTCCTCTCTACTGCTCGGACCCATCCCTCTGGGTAGTGTCTTTGTCTaGCCTGCTTTTGCCATACAC | + |
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Preference number: 2 (lower is better) Translates to: SRGAQAMSSSLLLGPIPLGSVFV*PAFAIH Trigger: GTGTATGGCAAAAGCAGGCCAGACAAAGACACTACC...CAGAGGGATGGGTCCGAGCAGTAGAGAGGAAGACATTGCCTGAGCACCTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR TCA 90 bp | AACCTGGTGGGAAATCCAGCTTGCACTGGATGTTGCGTGTCTCTGTGTATGCTGGGACAGAGGGGCTTCTaGCATTCAGCTTCGCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: NLVGNPACTGCCVSLCMLGQRGF*HSASLD Trigger: ATCTAGCGAAGCTGAATGTCAGAAGCCCCTCTGTCC...CAGCATACACAGAGACACGCAACATCCAGTGCAAGCTGGATTTCCCACCAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR TCA 90 bp | TCATGTCTCCCGCACAGATGGCCTCATGTAGTTACAACAGGTCAGCAGCAGCACATGTGTGGGATTTGGTaGCAGCCTTGTTGTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: SCLPHRWPHVVTTGQQQHMCGIW*QPCCSV Trigger: GACTGAACAACAAGGCTGTCACCAAATCCCACACAT...GTGCTGCTGCTGACCTGTTGTAACTACATGAGGCCATCTGTGCGGGAGACATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCCACCTGACTGTGATCTaGGCATGTGCACACAACACA | + |
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Preference number: 2 (lower is better) Translates to: CQTATVKGDFGNRRTTTIHLTVI*ACAHNT Trigger: TGTGTTGTGTGCACATGCGCAGATCACAGTCAGGTG...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCAAGGATGAGCAGAGGTaGTCAGGCAATGTCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: CQTATVKGDFGNRRTTTIKDEQR*SGNVFL Trigger: GAGGAAGACATTGCCTGAGCACCTCTGCTCATCCTT...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR TCA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCGCTATTCCTCTTGTGTaGCATAACACTAGGCCTACC | + |
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Preference number: 2 (lower is better) Translates to: CQTATVKGDFGNRRTTTIAIPLV*HNTRPT Trigger: GGTAGGCCTAGTGTTATGTCACACAAGAGGAATAGC...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | GAACTCCGAGTCTGTCTGGTTTCAGGAGTTGTGGCTAGAGAACCTGGTGGGAAACCACCGACCAATACATaGAGACTTTGTGTGTGGACA | + |
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Preference number: 2 (lower is better) Translates to: ELRVCLVSGVVAREPGGKPPTNT*RLCVWT Trigger: TGTCCACACACAAAGTCTGCATGTATTGGTCGGTGG...TTTCCCACCAGGTTCTCTAGCCACAACTCCTGAAACCAGACAGACTCGGAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR CCA 90 bp | TTCTATCTCACGAACTCAAACTGCCAACACCAAGCCCTGGGCTGCCTGTGCCCCTTGCTTGCAGTAAACTaGCTGCTGACAATTTATCTG | + |
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Preference number: 2 (lower is better) Translates to: FYLTNSNCQHQALGCLCPLLAVN*LLTIYL Trigger: CAGATAAATTGTCAGCAGCCAGTTTACTGCAAGCAA...GGGGCACAGGCAGCCCAGGGCTTGGTGTTGGCAGTTTGAGTTCGTGAGATAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR CCA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCAACTCCGAGTCTGTCTaGTTTCAGGAGTTGTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: CQTATVKGDFGNRRTTTINSESV*FQELWL Trigger: TAGCCACAACTCCTGAAACCAGACAGACTCGGAGTT...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR CAA 90 bp | GGGACAGTTTACAGGAAAGTGTTATCTGACCTCAGGGGTACTGCCTaGACACCCCACTCTTTCTATCTCACGAACTCAAACTGCCAACAC | + |
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Preference number: 2 (lower is better) Translates to: GTVYRKVLSDLRGTA*TPHSFYLTNSNCQH Trigger: GTGTTGGCAGTTTGAGTTCGTGAGATAGAAAGAGTGGGGTGTCAAGGCAGTACCCCTGAGGTCAGATAACACTTTCCTGTAAACTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR TCA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCAGGAGCACACATCCCTaGTTTCTTACTCAAAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: CQTATVKGDFGNRRTTTIRSTHP*FLTQRD Trigger: ATCCCTTTGAGTAAGAAATCAGGGATGTGTGCTCCT...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | AGCAGAGGTGCTCAGGCAATGTCTTCCTCTCTACTGCTCGGACCCATCCCTCTGAACACAGTCCAAAAATaGTCCCTTAGGAAACATTTC | + |
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Preference number: 2 (lower is better) Translates to: SRGAQAMSSSLLLGPIPLNTVQK*SLRKHF Trigger: GAAATGTTTCCTAAGGGAGCATTTTTGGACTGTGTT...CAGAGGGATGGGTCCGAGCAGTAGAGAGGAAGACATTGCCTGAGCACCTCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | GTAGTTATAAGTGAGGGACAGTTTACAGGAAAGTGTTATCTGACCTCAGGGGTAGTGCACCCACGTGGTTaGCAAGGGCTTCTCATTGCC | + |
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Preference number: 2 (lower is better) Translates to: VVISEGQFTGKCYLTSGVVHPRG*QGLLIA Trigger: GGCAATGAGAAGCCCTTGGCAACCACGTGGGTGCAC...TACCCCTGAGGTCAGATAACACTTTCCTGTAAACTGTCCCTCACTTATAACTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR TCA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCAGATGGCAAATAATCTaGCTTCTACCGGACAACTTC | + |
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Preference number: 2 (lower is better) Translates to: CQTATVKGDFGNRRTTTIRWQII*LLPDNF Trigger: GAAGTTGTCCGGTAGAAGTCAGATTATTTGCCATCT...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | GTAGTTATAAGTGAGGGACAGTTTACAGGAAAGTGTTATCTGACCTCAGGGGTACCAAGGGCTTCTCATTaGCTTGCTAGAAGCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: VVISEGQFTGKCYLTSGVPRASH*LARSLQ Trigger: CTGCAGGCTTCTAGCAAGGCAATGAGAAGCCCTTGG...TACCCCTGAGGTCAGATAACACTTTCCTGTAAACTGTCCCTCACTTATAACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR CCA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCTTGCTTGCAGTAAACTaGCTGCTGACAATTTATCTG | + |
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Preference number: 2 (lower is better) Translates to: CQTATVKGDFGNRRTTTILLAVN*LLTIYL Trigger: CAGATAAATTGTCAGCAGCCAGTTTACTGCAAGCAA...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | GTAGTTATAAGTGAGGGACAGTTTACAGGAAAGTGTTATCTGACCTCAGGGGTAAAGGATGAGCAGAGGTaGTCAGGCAATGTCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: VVISEGQFTGKCYLTSGVKDEQR*SGNVFL Trigger: GAGGAAGACATTGCCTGAGCACCTCTGCTCATCCTT...TACCCCTGAGGTCAGATAACACTTTCCTGTAAACTGTCCCTCACTTATAACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | GTAGTTATAAGTGAGGGACAGTTTACAGGAAAGTGTTATCTGACCTCAGGGGTACCACCGACCAATACATaGAGACTTTGTGTGTGGACA | + |
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Preference number: 2 (lower is better) Translates to: VVISEGQFTGKCYLTSGVPPTNT*RLCVWT Trigger: TGTCCACACACAAAGTCTGCATGTATTGGTCGGTGG...TACCCCTGAGGTCAGATAACACTTTCCTGTAAACTGTCCCTCACTTATAACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | GTAGTTATAAGTGAGGGACAGTTTACAGGAAAGTGTTATCTGACCTCAGGGGTAAATCATCAAGCTGCATaGATGAGAAACTGGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: VVISEGQFTGKCYLTSGVNHQAA*MRNWPA Trigger: GGCTGGCCAGTTTCTCATGCATGCAGCTTGATGATT...TACCCCTGAGGTCAGATAACACTTTCCTGTAAACTGTCCCTCACTTATAACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | AGAAAAAGCCTTCCCTGGCAACAGTACATTAAAGCCCATCTGAACTATCAAGATGCTTGCACTGGATGTTaGGTGTCTCTGTGTATGCTG | + |
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Preference number: 2 (lower is better) Translates to: RKSLPWQQYIKAHLNYQDACTGC*VSLCML Trigger: CAGCATACACAGAGACACGCAACATCCAGTGCAAGC...ATCTTGATAGTTCAGATGGGCTTTAATGTACTGTTGCCAGGGAAGGCTTTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR TCA 90 bp | AGAAAAAGCCTTCCCTGGCAACAGTACATTAAAGCCCATCTGAACTATCAAGATATGTGTGGGATTTGGTaGCAGCCTTGTTGTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: RKSLPWQQYIKAHLNYQDMCGIW*QPCCSV Trigger: GACTGAACAACAAGGCTGTCACCAAATCCCACACAT...ATCTTGATAGTTCAGATGGGCTTTAATGTACTGTTGCCAGGGAAGGCTTTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR GCA 90 bp | GTAGTTATAAGTGAGGGACAGTTTACAGGAAAGTGTTATCTGACCTCAGGGGTAACAAGACATATCCACTaGCATTCACTTCTTCACACC | + |
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Preference number: 2 (lower is better) Translates to: VVISEGQFTGKCYLTSGVTRHIH*HSLLHT Trigger: GGTGTGAAGAAGTGAATGGCAGTGGATATGTCTTGT...TACCCCTGAGGTCAGATAACACTTTCCTGTAAACTGTCCCTCACTTATAACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR-3UTR TCA 90 bp | GTAGTTATAAGTGAGGGACAGTTTACAGGAAAGTGTTATCTGACCTCAGGGGTAAACCAGTTAACACCCTaGAAAATGTATAAGGCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: VVISEGQFTGKCYLTSGVNQLTP*KMYKAL Trigger: AAGGGCCTTATACATTTTTCAGGGTGTTAACTGGTT...TACCCCTGAGGTCAGATAACACTTTCCTGTAAACTGTCCCTCACTTATAACTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR GCA 90 bp | AGAAAAAGCCTTCCCTGGCAACAGTACATTAAAGCCCATCTGAACTATCAAGATAACACAGTCCAAAAATaGTCCCTTAGGAAACATTTC | + |
|
Preference number: 2 (lower is better) Translates to: RKSLPWQQYIKAHLNYQDNTVQK*SLRKHF Trigger: GAAATGTTTCCTAAGGGAGCATTTTTGGACTGTGTT...ATCTTGATAGTTCAGATGGGCTTTAATGTACTGTTGCCAGGGAAGGCTTTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR GCA 72 bp | CCGAGTGCACCCACGTGGTTGCCAAGGGCTTCTCATTaGCTTGCTAGAAGCCTGCAGCTCCGACACCCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: PSAPTWLPRASH*LARSLQLRHPR Trigger: TCGGGGGTGTCGGAGCTGCAGGCTTCTAGCAAGGCAATGAGAAGCCCTTGGCAACCACGTGGGTGCACTCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | TTCTATCTCACGAACTCAAACTGCCAACACCAAGCCCTGGGCTGCCTGTGCCCCTCCCCTCCAGCGGCCTaGGCCTTGTCCCCCTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: FYLTNSNCQHQALGCLCPSPPAA*ALSPFQ Trigger: TTGGAAGGGGGACAAGGCCAAGGCCGCTGGAGGGGA...GGGGCACAGGCAGCCCAGGGCTTGGTGTTGGCAGTTTGAGTTCGTGAGATAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGAGGTGCTCAGGCAATGTCTTCCTCTCTACTGCTCGGACCCATCCCTCTGCCAGCGGCCTTGGCCTaGTCCCCCTTCCAATCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SRGAQAMSSSLLLGPIPLPAALA*SPFQSQ Trigger: CTGAGATTGGAAGGGGGACAAGGCCAAGGCCGCTGG...CAGAGGGATGGGTCCGAGCAGTAGAGAGGAAGACATTGCCTGAGCACCTCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | TTCTATCTCACGAACTCAAACTGCCAACACCAAGCCCTGGGCTGCCTGTGCCCCCCGACACCCCCGAACTaGGAAGCCAAAGCTCCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: FYLTNSNCQHQALGCLCPPTPPN*EAKAPC Trigger: GCAAGGAGCTTTGGCTTCCAAGTTCGGGGGTGTCGG...GGGGCACAGGCAGCCCAGGGCTTGGTGTTGGCAGTTTGAGTTCGTGAGATAGAA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | GAACTCCGAGTCTGTCTGGTTTCAGGAGTTGTGGCTAGAGAACCTGGTGGGAAATCCCCTCCAGCGGCCTaGGCCTTGTCCCCCTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: ELRVCLVSGVVAREPGGKSPPAA*ALSPFQ Trigger: TTGGAAGGGGGACAAGGCCAAGGCCGCTGGAGGGGA...TTTCCCACCAGGTTCTCTAGCCACAACTCCTGAAACCAGACAGACTCGGAGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR GCA 72 bp | GAGAACCTGGTGGGAAATCCAGCTTGCACTGGATGTTaGGTGTCTCTGTGTATGCTGACCTCCCCTCCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: ENLVGNPACTGC*VSLCMLTSPPA Trigger: CGCTGGAGGGGAGGTCAGCATACACAGAGACACGCAACATCCAGTGCAAGCTGGATTTCCCACCAGGTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR TCA 72 bp | ACGCTGGAGACGCCTTCTCTCACCAGGGCTCTAGTCTaGACATCACCTGACTGTGATCTGCGCATGTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: TLETPSLTRALV*TSPDCDLRMCT Trigger: TGTGCACATGCGCAGATCACAGTCAGGTGATGTTCAGACTAGAGCCCTGGTGAGAGAAGGCGTCTCCAGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR CCA 72 bp | GTGGCTAGAGAACCTGGTGGGAAATCCAGCTTGCACTaGATGTTGCGTGTCTCTGTGTATGCTGACCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VAREPGGKSSLH*MLRVSVYADLP Trigger: GGGGAGGTCAGCATACACAGAGACACGCAACATCCAGTGCAAGCTGGATTTCCCACCAGGTTCTCTAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | TTCTATCTCACGAACTCAAACTGCCAACACCAAGCCCTGGGCTGCCTGTGCCCCCAATACATGCAGACTTaGTGTGTGGACAGAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FYLTNSNCQHQALGCLCPQYMQT*CVDRGA Trigger: AGCCCCTCTGTCCACACACAAAGTCTGCATGTATTG...GGGGCACAGGCAGCCCAGGGCTTGGTGTTGGCAGTTTGAGTTCGTGAGATAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | TTCTATCTCACGAACTCAAACTGCCAACACCAAGCCCTGGGCTGCCTGTGCCCCAGCTTGCACTGGATGTaGCGTGTCTCTGTGTATGCT | + |
|
Preference number: 3 (lower is better) Translates to: FYLTNSNCQHQALGCLCPSLHWM*RVSVYA Trigger: AGCATACACAGAGACACGCAACATCCAGTGCAAGCT...GGGGCACAGGCAGCCCAGGGCTTGGTGTTGGCAGTTTGAGTTCGTGAGATAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR TCA 72 bp | TGTTGTTCAGTCACTCCAATGCAATGCGCACAGCAATaGACCATCACACTCGGGCTCGCCACCAGGGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CCSVTPMQCAQQ*TITLGLATRVS Trigger: TGACACCCTGGTGGCGAGCCCGAGTGTGATGGTTCATTGCTGTGCGCATTGCATTGGAGTGACTGAACAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR TCA 72 bp | AAGTCATCAGCCTGTGCCAACCACCCAGTCCAAGGATaGGCAGAGGTGCTCAGGCAATGTCTTCCTCTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: KSSACANHPVQG*AEVLRQCLPLY Trigger: GTAGAGAGGAAGACATTGCCTGAGCACCTCTGCTCATCCTTGGACTGGGTGGTTGGCACAGGCTGATGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR CCA 72 bp | CTTGCTAGAAGCCTGCAGCTCCGACACCCCCGAACTTaGAAGCCAAAGCTCCTTGCTAGTCAGATACAACCA | + |
|
Preference number: 3 (lower is better) Translates to: LARSLQLRHPRT*KPKLLASQIQP Trigger: TGGTTGTATCTGACTAGCAAGGAGCTTTGGCTTCCAAGTTCGGGGGTGTCGGAGCTGCAGGCTTCTAGCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | TTCTATCTCACGAACTCAAACTGCCAACACCAAGCCCTGGGCTGCCTGTGCCCCCACCTCCAAACCCCTTaGAAATCACCAAGAGGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: FYLTNSNCQHQALGCLCPHLQTP*KSPRGY Trigger: GTAACCTCTTGGTGATTTCAAAGGGGTTTGGAGGTG...GGGGCACAGGCAGCCCAGGGCTTGGTGTTGGCAGTTTGAGTTCGTGAGATAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR GCA 72 bp | GAGTTGTGGCTAGAGAACCTGGTGGGAAATCCAGCTTaGACTGGATGTTGCGTGTCTCTGTGTATGCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: ELWLENLVGNPA*TGCCVSLCMLT Trigger: GGTCAGCATACACAGAGACACGCAACATCCAGTGCAAGCTGGATTTCCCACCAGGTTCTCTAGCCACAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | TCATGTCTCCCGCACAGATGGCCTCATGTAGTTACAACAGGTCAGCAGCAGCACAGCTTGCACTGGATGTaGCGTGTCTCTGTGTATGCT | + |
|
Preference number: 3 (lower is better) Translates to: SCLPHRWPHVVTTGQQQHSLHWM*RVSVYA Trigger: AGCATACACAGAGACACGCAACATCCAGTGCAAGCT...GTGCTGCTGCTGACCTGTTGTAACTACATGAGGCCATCTGTGCGGGAGACATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCGTCTGGTTTCAGGAGTaGTGGCTAGAGAACCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CQTATVKGDFGNRRTTTIVWFQE*WLENLV Trigger: CACCAGGTTCTCTAGCCACAACTCCTGAAACCAGAC...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | TTCTATCTCACGAACTCAAACTGCCAACACCAAGCCCTGGGCTGCCTGTGCCCCTTGTCTGGCCTGCTTTaGCCATACACAGTGAGTATA | + |
|
Preference number: 3 (lower is better) Translates to: FYLTNSNCQHQALGCLCPLSGLL*PYTVSI Trigger: TATACTCACTGTGTATGGCAAAAGCAGGCCAGACAA...GGGGCACAGGCAGCCCAGGGCTTGGTGTTGGCAGTTTGAGTTCGTGAGATAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | GAACTCCGAGTCTGTCTGGTTTCAGGAGTTGTGGCTAGAGAACCTGGTGGGAAACAATACATGCAGACTTaGTGTGTGGACAGAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ELRVCLVSGVVAREPGGKQYMQT*CVDRGA Trigger: AGCCCCTCTGTCCACACACAAAGTCTGCATGTATTG...TTTCCCACCAGGTTCTCTAGCCACAACTCCTGAAACCAGACAGACTCGGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR CCA 72 bp | GCAAAGAACTCCGAGTCTGTCTGGTTTCAGGAGTTGTaGCTAGAGAACCTGGTGGGAAATCCAGCTTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: AKNSESVWFQEL*LENLVGNPACT Trigger: AGTGCAAGCTGGATTTCCCACCAGGTTCTCTAGCCACAACTCCTGAAACCAGACAGACTCGGAGTTCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTTATAAGTGAGGGACAGTTTACAGGAAAGTGTTATCTGACCTCAGGGGTACCGACACCCCCGAACTaGGAAGCCAAAGCTCCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VVISEGQFTGKCYLTSGVPTPPN*EAKAPC Trigger: GCAAGGAGCTTTGGCTTCCAAGTTCGGGGGTGTCGG...TACCCCTGAGGTCAGATAACACTTTCCTGTAAACTGTCCCTCACTTATAACTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCCACCTCCAAACCCCTTaGAAATCACCAAGAGGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: CQTATVKGDFGNRRTTTIHLQTP*KSPRGY Trigger: GTAACCTCTTGGTGATTTCAAAGGGGTTTGGAGGTG...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR GCA 72 bp | AACGATTCAGATACCAAAGTCAAAGTCATCAGCCTGTaGCAACCACCCAGTCCAAGGATGAGCAGAGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: NDSDTKVKVISL*QPPSPRMSRGA Trigger: AGCACCTCTGCTCATCCTTGGACTGGGTGGTTGGCACAGGCTGATGACTTTGACTTTGGTATCTGAATCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGAGGTGCTCAGGCAATGTCTTCCTCTCTACTGCTCGGACCCATCCCTCTGTATTGTTTCGTTTCTTaGCTCTCAAGCTACAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SRGAQAMSSSLLLGPIPLYCFVS*LSSYSV Trigger: AACACTGTAGCTTGAGAGCAAAGAAACGAAACAATA...CAGAGGGATGGGTCCGAGCAGTAGAGAGGAAGACATTGCCTGAGCACCTCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGAGGTGCTCAGGCAATGTCTTCCTCTCTACTGCTCGGACCCATCCCTCTGATTCATTCTGGGATATaGTTTCGTTTCTTTGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SRGAQAMSSSLLLGPIPLIHSGI*FRFFAL Trigger: GAGAGCAAAGAAACGAAACAATATCCCAGAATGAAT...CAGAGGGATGGGTCCGAGCAGTAGAGAGGAAGACATTGCCTGAGCACCTCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR TCA 72 bp | AACGTCCAAGTACAACTCTTTGTCAAACAGCCACAGTaGAGGGTGACTTCGGTAACAGAAGGACCACCACCA | + |
|
Preference number: 3 (lower is better) Translates to: NVQVQLFVKQPQ*RVTSVTEGPPP Trigger: TGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACAAAGAGTTGTACTTGGACGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR CCA 72 bp | GAATACAGACACACTAAATCATGTCTCCCGCACAGATaGCCTCATGTAGTTACAACAGGTCAGCAGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: EYRHTKSCLPHR*PHVVTTGQQQH Trigger: GTGCTGCTGCTGACCTGTTGTAACTACATGAGGCCATCTGTGCGGGAGACATGATTTAGTGTGTCTGTATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAAAGCCTTCCCTGGCAACAGTACATTAAAGCCCATCTGAACTATCAAGATCTCAGGGGTACTGCCTaGACACCCCACTCTTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: RKSLPWQQYIKAHLNYQDLRGTA*TPHSFY Trigger: ATAGAAAGAGTGGGGTGTCAAGGCAGTACCCCTGAG...ATCTTGATAGTTCAGATGGGCTTTAATGTACTGTTGCCAGGGAAGGCTTTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCGAACTAAGAGTTGACTaGACCAAATTTACAGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CQTATVKGDFGNRRTTTIELRVD*TKFTVF Trigger: GAAGACTGTAAATTTGGTCAAGTCAACTCTTAGTTC...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTTATAAGTGAGGGACAGTTTACAGGAAAGTGTTATCTGACCTCAGGGGTATCAAAGGTAGTGTCTTaGTCTGGCCTGCTTTTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VVISEGQFTGKCYLTSGVSKVVS*SGLLLP Trigger: TGGCAAAAGCAGGCCAGACAAAGACACTACCTTTGA...TACCCCTGAGGTCAGATAACACTTTCCTGTAAACTGTCCCTCACTTATAACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR TCA 72 bp | AAAGCCTTCCCTGGCAACAGTACATTAAAGCCCATCTaGACTATCAAGATGTTTGCCTTGTTCAACAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KAFPGNSTLKPI*TIKMFALFNSS Trigger: GGAGCTGTTGAACAAGGCAAACATCTTGATAGTTCAGATGGGCTTTAATGTACTGTTGCCAGGGAAGGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR TCA 72 bp | TTACAGTCTTCATTCAAGAAGAAGTTCCCAGGATGCTaGGGGGCGAATGATAGATGCTATTCCTCTTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LQSSFKKKFPGC*GANDRCYSSCV Trigger: CACACAAGAGGAATAGCATCTATCATTCGCCCCTCAGCATCCTGGGAACTTCTTCTTGAATGAAGACTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTTATAAGTGAGGGACAGTTTACAGGAAAGTGTTATCTGACCTCAGGGGTATTGTCTGGCCTGCTTTaGCCATACACAGTGAGTATA | + |
|
Preference number: 3 (lower is better) Translates to: VVISEGQFTGKCYLTSGVLSGLL*PYTVSI Trigger: TATACTCACTGTGTATGGCAAAAGCAGGCCAGACAA...TACCCCTGAGGTCAGATAACACTTTCCTGTAAACTGTCCCTCACTTATAACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTTATAAGTGAGGGACAGTTTACAGGAAAGTGTTATCTGACCTCAGGGGTAATTCATTCTGGGATATaGTTTCGTTTCTTTGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VVISEGQFTGKCYLTSGVIHSGI*FRFFAL Trigger: GAGAGCAAAGAAACGAAACAATATCCCAGAATGAAT...TACCCCTGAGGTCAGATAACACTTTCCTGTAAACTGTCCCTCACTTATAACTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR CCA 72 bp | TACAATTTCCATAGAGTTGGTCCCCCGTCAGAGAGGTaGTTAAATCTCCAAAACAGTTTATCTCAAGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: YNFHRVGPPSER*LNLQNSLSQDL Trigger: TAAATCTTGAGATAAACTGTTTTGGAGATTTAACCACCTCTCTGACGGGGGACCAACTCTATGGAAATTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR CAA 72 bp | CACCAGGGTGTCACTGTCACCATGGGACTGGGGCACTaGATGAGGACTGTCCTACTTCTGGGGCTGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HQGVTVTMGLGH*MRTVLLLGLCL Trigger: GAGACACAGCCCCAGAAGTAGGACAGTCCTCATCAAGTGCCCCAGTCCCATGGTGACAGTGACACCCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGGTGCTCAGGCAATGTCTTCCTCTCTACTGCTCGGACCCATCCCTCTGGCAGTTCTGCCGCACTaGTGTAACCATTCCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRGAQAMSSSLLLGPIPLAVLPH*CNHSHP Trigger: AGGATGGGAATGGTTACATCAGTGCGGCAGAACTGC...CAGAGGGATGGGTCCGAGCAGTAGAGAGGAAGACATTGCCTGAGCACCTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR CAA 72 bp | GTGTCTCTGTGTATGCTGACCTCCCCTCCAGCGGCCTaGGCCTTGTCCCCCTTCCAATCTCAGCTTTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSLCMLTSPPAA*ALSPFQSQLYK Trigger: TTTGTAAAGCTGAGATTGGAAGGGGGACAAGGCCAAGGCCGCTGGAGGGGAGGTCAGCATACACAGAGACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR CAA 72 bp | AGAGAACCTGGTGGGAAATCCAGCTTGCACTGGATGTaGCGTGTCTCTGTGTATGCTGACCTCCCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: REPGGKSSLHWM*RVSVYADLPSS Trigger: GCTGGAGGGGAGGTCAGCATACACAGAGACACGCAACATCCAGTGCAAGCTGGATTTCCCACCAGGTTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR CAA 72 bp | GGAGTTGTGGCTAGAGAACCTGGTGGGAAATCCAGCTaGCACTGGATGTTGCGTGTCTCTGTGTATGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GVVAREPGGKSS*HWMLRVSVYAD Trigger: GTCAGCATACACAGAGACACGCAACATCCAGTGCAAGCTGGATTTCCCACCAGGTTCTCTAGCCACAACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| 3UTR CAA 72 bp | ACGGCAAAGAACTCCGAGTCTGTCTGGTTTCAGGAGTaGTGGCTAGAGAACCTGGTGGGAAATCCAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TAKNSESVWFQE*WLENLVGNPAC Trigger: GCAAGCTGGATTTCCCACCAGGTTCTCTAGCCACAACTCCTGAAACCAGACAGACTCGGAGTTCTTTGCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| CDS-3UTR TCA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCGCAGTTCTGCCGCACTaGTGTAACCATTCCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: CQTATVKGDFGNRRTTTIAVLPH*CNHSHP Trigger: AGGATGGGAATGGTTACATCAGTGCGGCAGAACTGC...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| CDS-3UTR GCA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCGACGTGGCGCAGTTCTaGCGCACTGATGTAACCATT | + |
|
Preference number: 4 (lower is better) Translates to: CQTATVKGDFGNRRTTTIDVAQF*RTDVTI Trigger: AATGGTTACATCAGTGCGGCAGAACTGCGCCACGTC...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| CDS-3UTR GCA 90 bp | TCATGTCTCCCGCACAGATGGCCTCATGTAGTTACAACAGGTCAGCAGCAGCACAGTCAATGGTGCCATTaGCATCAGCATCCACTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SCLPHRWPHVVTTGQQQHSQWCH*HQHPLR Trigger: ACGAAGTGGATGCTGATGGCAATGGCACCATTGACT...GTGCTGCTGCTGACCTGTTGTAACTACATGAGGCCATCTGTGCGGGAGACATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
||
| CDS-3UTR TCA 90 bp | TCATGTCTCCCGCACAGATGGCCTCATGTAGTTACAACAGGTCAGCAGCAGCACCGAATTCTTCATAGTTaGCTTGTCCGTCGCCATCAA | + |
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Preference number: 4 (lower is better) Translates to: SCLPHRWPHVVTTGQQQHRILHS*LVRRHQ Trigger: TTGATGGCGACGGACAAGTCAACTATGAAGAATTCG...GTGCTGCTGCTGACCTGTTGTAACTACATGAGGCCATCTGTGCGGGAGACATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| CDS-3UTR GCA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCAGTCAATGGTGCCATTaGCATCAGCATCCACTTCGT | + |
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Preference number: 4 (lower is better) Translates to: CQTATVKGDFGNRRTTTISQWCH*HQHPLR Trigger: ACGAAGTGGATGCTGATGGCAATGGCACCATTGACT...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| CDS-3UTR CCA 90 bp | AACCTGGTGGGAAATCCAGCTTGCACTGGATGTTGCGTGTCTCTGTGTATGCTGACTCTGGGAAGTCAATaGTGCCATTGCCATCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: NLVGNPACTGCCVSLCMLTLGSQ*CHCHQH Trigger: ATGCTGATGGCAATGGCACCATTGACTTCCCAGAGT...CAGCATACACAGAGACACGCAACATCCAGTGCAAGCTGGATTTCCCACCAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| CDS-3UTR TCA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCCGAATTCTTCATAGTTaGCTTGTCCGTCGCCATCAA | + |
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Preference number: 4 (lower is better) Translates to: CQTATVKGDFGNRRTTTIRILHS*LVRRHQ Trigger: TTGATGGCGACGGACAAGTCAACTATGAAGAATTCG...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| CDS-3UTR GCA 90 bp | GTAGTTATAAGTGAGGGACAGTTTACAGGAAAGTGTTATCTGACCTCAGGGGTAGACGTGGCGCAGTTCTaGCGCACTGATGTAACCATT | + |
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Preference number: 4 (lower is better) Translates to: VVISEGQFTGKCYLTSGVDVAQF*RTDVTI Trigger: AATGGTTACATCAGTGCGGCAGAACTGCGCCACGTC...TACCCCTGAGGTCAGATAACACTTTCCTGTAAACTGTCCCTCACTTATAACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| 3UTR CAA 72 bp | ACTGAATCAAAGGTAGTGTCTTTGTCTGGCCTGCTTTaGCCATACACAGTGAGTATAGGAATACAGACACAC | + |
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Preference number: 4 (lower is better) Translates to: TESKVVSLSGLL*PYTVSIGIQTH Trigger: GTGTGTCTGTATTCCTATACTCACTGTGTATGGCAAAAGCAGGCCAGACAAAGACACTACCTTTGATTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| CDS-3UTR CAA 90 bp | AGCAGAGGTGCTCAGGCAATGTCTTCCTCTCTACTGCTCGGACCCATCCCTCTGACGGTCCCCAGTTCCTaGGTTGTGATGGTGCCGTCA | + |
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Preference number: 5 (lower is better) Translates to: SRGAQAMSSSLLLGPIPLTVPSS*VVMVPS Trigger: TGACGGCACCATCACAACCAAGGAACTGGGGACCGT...CAGAGGGATGGGTCCGAGCAGTAGAGAGGAAGACATTGCCTGAGCACCTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110082.11 |
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| CDS-3UTR CAA 90 bp | TGTCAAACAGCCACAGTGAAGGGTGACTTCGGTAACAGAAGGACCACCACCATCGCAGCTCGGCTTCTGTaGGGTTCTGACCCAGTGACC | + |
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Preference number: 5 (lower is better) Translates to: CQTATVKGDFGNRRTTTIAARLL*GSDPVT Trigger: GGTCACTGGGTCAGAACCCAACAGAAGCCGAGCTGC...GATGGTGGTGGTCCTTCTGTTACCGAAGTCACCCTTCACTGTGGCTGTTTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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| CDS-3UTR CAA 90 bp | GAACTCCGAGTCTGTCTGGTTTCAGGAGTTGTGGCTAGAGAACCTGGTGGGAAAGCAGCTCGGCTTCTGTaGGGTTCTGACCCAGTGACC | + |
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Preference number: 5 (lower is better) Translates to: ELRVCLVSGVVAREPGGKAARLL*GSDPVT Trigger: GGTCACTGGGTCAGAACCCAACAGAAGCCGAGCTGC...TTTCCCACCAGGTTCTCTAGCCACAACTCCTGAAACCAGACAGACTCGGAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001204.8 ENSMUST00000110082.11 |
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