Pregenerated sensors for CALHM4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039508Ensembl transcript IDs: ENSMUST00000048052.7, ENSMUST00000218239.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAAGCTATAGGGACCCTGTGAGGTGTCACCCACACATAGAAGATTaGGTACAGAGATTTCTCTCCAGTCCTGACACGAAGGGATACGAA | + |
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Preference number: 1 (lower is better) Translates to: GSYRDPVRCHPHIED*VQRFLSSPDTKGYE Trigger: TTCGTATCCCTTCGTGTCAGGACTGGAGAGAAATCTCTGTACCCAATCTTCTATGTGTGGGTGACACCTCACAGGGTCCCTATAGCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR TCA 90 bp | TCACCCACACATAGAAGATTGGGTACAGAGATTTCTCTCCAGTCCTaGCACGAAGGGATACGAATATGTTTGATGTCTTCACTCCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SPTHRRLGTEISLQS*HEGIRICLMSSLPG Trigger: TCCTGGGAGTGAAGACATCAAACATATTCGTATCCCTTCGTGTCAGGACTGGAGAGAAATCTCTGTACCCAATCTTCTATGTGTGGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR GCA 90 bp | ATGGGTATTATAAACCAAACTCAGGTTCTTCAGCAGAGAAGTATTTaGTCTTACCCAATGAGCCATCCTTCCAGCATCTCTCCCTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: MGIINQTQVLQQRSI*SYPMSHPSSISPSH Trigger: ATGAGAGGGAGAGATGCTGGAAGGATGGCTCATTGGGTAAGAGCAAATACTTCTCTGCTGAAGAACCTGAGTTTGGTTTATAATACCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR GCA 90 bp | CAGGCTCATGTCTTCCTCCTGTACCATCTCCCTGACTCTAATCTGTaGATGTATGCTACATTTAGAACCACCACTGGAGATTTTAAAAAC | + |
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Preference number: 1 (lower is better) Translates to: QAHVFLLYHLPDSNL*MYATFRTTTGDFKN Trigger: GTTTTTAAAATCTCCAGTGGTGGTTCTAAATGTAGCATACATGCACAGATTAGAGTCAGGGAGATGGTACAGGAGGAAGACATGAGCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR TCA 90 bp | GGCCCAGGAGCCAGGTGCTTAAGTGAACATGACAGAAGTCAGGTTTaGAACAACTCTAATCAAGACATATTTTCTAATGTCTATCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: GPGARCLSEHDRSQV*NNSNQDIFSNVYLA Trigger: GGCAAGATAGACATTAGAAAATATGTCTTGATTAGAGTTGTTTCAAACCTGACTTCTGTCATGTTCACTTAAGCACCTGGCTCCTGGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR GCA 90 bp | CCAATGAGCCATCCTTCCAGCATCTCTCCCTCTCATTGTGTCTGCTaGTTTGAGTTTGAGAAACAACTAGAAATTGTAAAACTTCATTCC | + |
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Preference number: 1 (lower is better) Translates to: PMSHPSSISPSHCVC*FEFEKQLEIVKLHS Trigger: GGAATGAAGTTTTACAATTTCTAGTTGTTTCTCAAACTCAAAGCAGCAGACACAATGAGAGGGAGAGATGCTGGAAGGATGGCTCATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR TCA 90 bp | CTGACTCTGGTTTTTCTCTTACAAGCCTTCACAAGCTCGTCTTTCTaGGCTGGTTTTGTGATTAGTCAACACAAACTAACAAACAACAAA | + |
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Preference number: 1 (lower is better) Translates to: LTLVFLLQAFTSSSF*AGFVISQHKLTNNK Trigger: TTTGTTGTTTGTTAGTTTGTGTTGACTAATCACAAAACCAGCTCAGAAAGACGAGCTTGTGAAGGCTTGTAAGAGAAAAACCAGAGTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR TCA 90 bp | AGTTCATTTTCTCATCCACAACCATTTAAGAGACAGATTCTCTTATaGTCTCCTTTCACAGTTAGGAGTGGGAAGCATGGAAAAGTACAA | + |
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Preference number: 1 (lower is better) Translates to: SSFSHPQPFKRQILL*SPFTVRSGKHGKVQ Trigger: TTGTACTTTTCCATGCTTCCCACTCCTAACTGTGAAAGGAGATCATAAGAGAATCTGTCTCTTAAATGGTTGTGGATGAGAAAATGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTGGAGAGCAGGAGAGCAATGGTTGCCAAAACGACCAGAATCCAGCCCAGCCAGCTAAATTCCAATTaGCTTAAATTCCCATGCCCA | + |
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Preference number: 2 (lower is better) Translates to: HLESRRAMVAKTTRIQPSQLNSN*LKFPCP Trigger: TGGGCATGGGAATTTAAGTCAATTGGAATTTAGCTG...GCTGGGCTGGATTCTGGTCGTTTTGGCAACCATTGCTCTCCTGCTCTCCAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR-3UTR TCA 90 bp | GGACCCTGTGAGGTGTCACCCACACATAGAAGATTGGGTACAGAGATTTCTCTCACACAACAGTCATCATaGGCATGTGATGGAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: GPCEVSPTHRRLGTEISLTQQSS*ACDGTV Trigger: TACAGTTCCATCACATGCTCATGATGACTGTTGTGT...GAGAGAAATCTCTGTACCCAATCTTCTATGTGTGGGTGACACCTCACAGGGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGAGAGCTTCTCACTCTATATATTGATTTCGGAAATAGGACTTTGGATGGAGGGGTTATGGTCCTGTaGGACAGGTACCTGTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: DGELLTLYIDFGNRTLDGGVMVL*DRYLWR Trigger: CCTCCACAGGTACCTGTCTCACAGGACCATAACCCC...TCCATCCAAAGTCCTATTTCCGAAATCAATATATAGAGTGAGAAGCTCTCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR TCA 90 bp | GGACCCTGTGAGGTGTCACCCACACATAGAAGATTGGGTACAGAGATTTCTCTCACAAGCTCGTCTTTCTaGGCTGGTTTTGTGATTAGT | + |
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Preference number: 2 (lower is better) Translates to: GPCEVSPTHRRLGTEISLTSSSF*AGFVIS Trigger: ACTAATCACAAAACCAGCTCAGAAAGACGAGCTTGT...GAGAGAAATCTCTGTACCCAATCTTCTATGTGTGGGTGACACCTCACAGGGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR-3UTR GCA 90 bp | GGACCCTGTGAGGTGTCACCCACACATAGAAGATTGGGTACAGAGATTTCTCTCTCGACTGGGTATTATTaGAGCATTTCAGGATTCTGC | + |
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Preference number: 2 (lower is better) Translates to: GPCEVSPTHRRLGTEISLSTGYY*SISGFC Trigger: GCAGAATCCTGAAATGCTGCAATAATACCCAGTCGA...GAGAGAAATCTCTGTACCCAATCTTCTATGTGTGGGTGACACCTCACAGGGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR-3UTR CCA 90 bp | GGACCCTGTGAGGTGTCACCCACACATAGAAGATTGGGTACAGAGATTTCTCTCTCCAATCTTGCTTCTTaGTCATTAGGTATGGACCCA | + |
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Preference number: 2 (lower is better) Translates to: GPCEVSPTHRRLGTEISLSNLAS*SLGMDP Trigger: TGGGTCCATACCTAATGACCAAGAAGCAAGATTGGA...GAGAGAAATCTCTGTACCCAATCTTCTATGTGTGGGTGACACCTCACAGGGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR CAA 90 bp | CATGGGTATTATAAACCAAACTCAGGTTCTTCAGCAGAGAAGTATTaGCTCTTACCCAATGAGCCATCCTTCCAGCATCTCTCCCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: HGYYKPNSGSSAEKY*LLPNEPSFQHLSLS Trigger: TGAGAGGGAGAGATGCTGGAAGGATGGCTCATTGGGTAAGAGCAAATACTTCTCTGCTGAAGAACCTGAGTTTGGTTTATAATACCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR TCA 90 bp | GAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTCTATATATTGATGATGCTGCAGAGAGGTaGGGGGAGAGCAACATCTTG | + |
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Preference number: 2 (lower is better) Translates to: EHVMELYKDGELLTLYIDDAAER*GESNIL Trigger: CAAGATGTTGCTCTCCCCTCACCTCTCTGCAGCATC...ATCAATATATAGAGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTTTGATGTCTTCACTCCCAGGAACGAAGCCAAATACTTTCTTGATTCGATGGGGAGAGCAACATCTTaGCAGACATTTGGAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: MFDVFTPRNEAKYFLDSMGRATS*QTFGEQ Trigger: CTGCTCTCCAAATGTCTGGCAAGATGTTGCTCTCCC...CATCGAATCAAGAAAGTATTTGGCTTCGTTCCTGGGAGTGAAGACATCAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTCTATATATTGATGTGTACAGTCACAGGTaGGCAGCACAGATGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: EHVMELYKDGELLTLYIDVYSHR*AAQMSS Trigger: AGAGGACATCTGTGCTGCCCACCTGTGACTGTACAC...ATCAATATATAGAGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR-3UTR TCA 90 bp | AACAGTCATCATGAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTAAAAATCAGGCACCCTaGACTTTGAAAGGTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: NSHHEHVMELYKDGELLTKNQAP*TLKGAA Trigger: AGCTGCACCTTTCAAAGTTCAGGGTGCCTGATTTTT...AGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTCATGATGACTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAATCAACAAATTAGGCCCCATAGAGATGGTCTGACTTTCATAAGGTTATCAGAGGATAGAGGAAAGTaGTGCTGGTTTGTGGTCACC | + |
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Preference number: 2 (lower is better) Translates to: TNQQIRPHRDGLTFIRLSEDRGK*CWFVVT Trigger: GGTGACCACAAACCAGCATCACTTTCCTCTATCCTC...TGATAACCTTATGAAAGTCAGACCATCTCTATGGGGCCTAATTTGTTGATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR TCA 90 bp | TATTTGATAATAAATGGTGGTGAAGATGACGCTGTGATGGACACTAATGGCAGCAGCACAGATGTCCTCTaGCTCTGGTTTTTCTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: YLIINGGEDDAVMDTNGSSTDVL*LWFFSY Trigger: GTAAGAGAAAAACCAGAGTCAGAGGACATCTGTGCT...GCTGCCATTAGTGTCCATCACAGCGTCATCTTCACCACCATTTATTATCAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR-3UTR CCA 90 bp | AACAGTCATCATGAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTGCTTTTCAACCTGTGTaGCACGACTCCTTAAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: NSHHEHVMELYKDGELLTAFQPV*HDSLRV Trigger: AACTCTTAAGGAGTCGTGCCACACAGGTTGAAAAGC...AGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTCATGATGACTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR TCA 90 bp | TATTTGATAATAAATGGTGGTGAAGATGACGCTGTGATGGACACTAATGGCAGCAATGGAAACTTCCTCTaGCTTTTTCTTCGACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: YLIINGGEDDAVMDTNGSNGNFL*LFLRLG Trigger: ACCCAGTCGAAGAAAAAGTCAGAGGAAGTTTCCATT...GCTGCCATTAGTGTCCATCACAGCGTCATCTTCACCACCATTTATTATCAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAATCAACAAATTAGGCCCCATAGAGATGGTCTGACTTTCATAAGGTTATCAATCTCAATAGCTCTCTaGGGGAGCTATTATGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: TNQQIRPHRDGLTFIRLSISIAL*GSYYGH Trigger: ATGCCCATAATAGCTCCCTCAGAGAGCTATTGAGAT...TGATAACCTTATGAAAGTCAGACCATCTCTATGGGGCCTAATTTGTTGATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR TCA 90 bp | CATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTCTATATATTGATTTCAAAAATCAGGCACCCTaGACTTTGAAAGGTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: HVMELYKDGELLTLYIDFKNQAP*TLKGAA Trigger: AGCTGCACCTTTCAAAGTTCAGGGTGCCTGATTTTT...GAAATCAATATATAGAGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTCTATATATTGATACACAACAGTCATCATaGGCATGTGATGGAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: EHVMELYKDGELLTLYIDTQQSS*ACDGTV Trigger: TACAGTTCCATCACATGCTCATGATGACTGTTGTGT...ATCAATATATAGAGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTCTATATATTGATCCCTCTCATTGTGTCTaGTGCTTTGAGTTTGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: EHVMELYKDGELLTLYIDPSHCV*CFEFEK Trigger: TTTCTCAAACTCAAAGCAGCAGACACAATGAGAGGG...ATCAATATATAGAGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR GCA 90 bp | GATGGAGAGCTTCTCACTCTATATATTGATTTCGGAAATAGGACTTTGGATGGAAAAACTGTATACCAGTaGTTTTCAACCTGTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: DGELLTLYIDFGNRTLDGKTVYQ*FSTCVA Trigger: TGCCACACAGGTTGAAAAGCACTGGTATACAGTTTT...TCCATCCAAAGTCCTATTTCCGAAATCAATATATAGAGTGAGAAGCTCTCCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR GCA 90 bp | GATGGAGAGCTTCTCACTCTATATATTGATTTCGGAAATAGGACTTTGGATGGACTGAACTTTGAAAGGTaGAGCTCTCAAGGTTTCATT | + |
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Preference number: 2 (lower is better) Translates to: DGELLTLYIDFGNRTLDGLNFER*SSQGFI Trigger: AATGAAACCTTGAGAGCTGCACCTTTCAAAGTTCAG...TCCATCCAAAGTCCTATTTCCGAAATCAATATATAGAGTGAGAAGCTCTCCATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGAGAGCTTCTCACTCTATATATTGATTTCGGAAATAGGACTTTGGATGGAATGACCATCAGCAGTTaGTTCTCTGGCAATCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: DGELLTLYIDFGNRTLDGMTISS*FSGNQK Trigger: TTTTTGATTGCCAGAGAACCAACTGCTGATGGTCAT...TCCATCCAAAGTCCTATTTCCGAAATCAATATATAGAGTGAGAAGCTCTCCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR TCA 90 bp | ACAAATCAACAAATTAGGCCCCATAGAGATGGTCTGACTTTCATAAGGTTATCAGACAGAAGTCAGGTTTaGAACAACTCTAATCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: TNQQIRPHRDGLTFIRLSDRSQV*NNSNQD Trigger: GTCTTGATTAGAGTTGTTTCAAACCTGACTTCTGTC...TGATAACCTTATGAAAGTCAGACCATCTCTATGGGGCCTAATTTGTTGATTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR TCA 90 bp | ACAAATCAACAAATTAGGCCCCATAGAGATGGTCTGACTTTCATAAGGTTATCAAAAGCTCCCAGAATTTaGCACAAAATAGAACCTCTC | + |
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Preference number: 2 (lower is better) Translates to: TNQQIRPHRDGLTFIRLSKAPRI*HKIEPL Trigger: GAGAGGTTCTATTTTGTGTCAAATTCTGGGAGCTTT...TGATAACCTTATGAAAGTCAGACCATCTCTATGGGGCCTAATTTGTTGATTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR TCA 90 bp | GAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTCTATATATTGATCTGCTCTGTATCCATTaGTTAACCTACATAACAGTG | + |
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Preference number: 2 (lower is better) Translates to: EHVMELYKDGELLTLYIDLLCIH*LTYITV Trigger: CACTGTTATGTAGGTTAATCAATGGATACAGAGCAG...ATCAATATATAGAGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR GCA 90 bp | GATGGAGAGCTTCTCACTCTATATATTGATTTCGGAAATAGGACTTTGGATGGACTTCCAAAAGCAGAATaGCAGTTGATGTCTTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: DGELLTLYIDFGNRTLDGLPKAE*QLMSFR Trigger: TCTAAAAGACATCAACTGGCATTCTGCTTTTGGAAG...TCCATCCAAAGTCCTATTTCCGAAATCAATATATAGAGTGAGAAGCTCTCCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR GCA 90 bp | GATGGAGAGCTTCTCACTCTATATATTGATTTCGGAAATAGGACTTTGGATGGAAGGTCTTCAGTGACTTaGTATCAAGTATTCATTCAC | + |
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Preference number: 2 (lower is better) Translates to: DGELLTLYIDFGNRTLDGRSSVT*YQVFIH Trigger: GTGAATGAATACTTGATAGCAAGTCACTGAAGACCT...TCCATCCAAAGTCCTATTTCCGAAATCAATATATAGAGTGAGAAGCTCTCCATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR CAA 90 bp | AGGGTCCCAGGATTAGGAGGGTTGAAAACCACTGCTCTGTATCCATaGATTAACCTACATAACAGTGAATATAAACATTTTATCAGATTA | + |
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Preference number: 2 (lower is better) Translates to: RVPGLGGLKTTALYP*INLHNSEYKHFIRL Trigger: TAATCTGATAAAATGTTTATATTCACTGTTATGTAGGTTAATCAATGGATACAGAGCAGTGGTTTTCAACCCTCCTAATCCTGGGACCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCTTAAAGAGGTTTGGGAACATAAAGGAACAATTTGACAAGGAAAAGTTAGTCATCATGAGCATGTaGTGGAACTGTATAAAGATG | + |
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Preference number: 2 (lower is better) Translates to: RSLKRFGNIKEQFDKEKLVIMSM*WNCIKM Trigger: CATCTTTATACAGTTCCATCACATGCTCATGATGAC...TAACTTTTCCTTGTCAAATTGTTCCTTTATGTTCCCAAACCTCTTTAAGGACCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCTTAAAGAGGTTTGGGAACATAAAGGAACAATTTGACAAGGAAAAGTTACAGCTAAATTCCAATTaGCTTAAATTCCCATGCCCA | + |
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Preference number: 2 (lower is better) Translates to: RSLKRFGNIKEQFDKEKLQLNSN*LKFPCP Trigger: TGGGCATGGGAATTTAAGTCAATTGGAATTTAGCTG...TAACTTTTCCTTGTCAAATTGTTCCTTTATGTTCCCAAACCTCTTTAAGGACCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR GCA 90 bp | ACAAATCAACAAATTAGGCCCCATAGAGATGGTCTGACTTTCATAAGGTTATCATCTCATTGTGTCTGCTaGTTTGAGTTTGAGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: TNQQIRPHRDGLTFIRLSSHCVC*FEFEKQ Trigger: TTGTTTCTCAAACTCAAAGCAGCAGACACAATGAGA...TGATAACCTTATGAAAGTCAGACCATCTCTATGGGGCCTAATTTGTTGATTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR CAA 90 bp | TGTCACACTAAGCAATGTTCTATCAGGGAAACTCCTGAAAGGATTTaGTTTTCTCAAAAATCCCTTCTTACTTGTTTCTGTCAAGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: CHTKQCSIRETPERI*FSQKSLLTCFCQVK Trigger: TTTGACTTGACAGAAACAAGTAAGAAGGGATTTTTGAGAAAACAAAATCCTTTCAGGAGTTTCCCTGATAGAACATTGCTTAGTGTGACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR CCA 90 bp | GAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTCTATATATTGATGTCCTTAAAGAGGTTTaGGAACATAAAGGAACAATT | + |
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Preference number: 2 (lower is better) Translates to: EHVMELYKDGELLTLYIDVLKEV*EHKGTI Trigger: AATTGTTCCTTTATGTTCCCAAACCTCTTTAAGGAC...ATCAATATATAGAGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR-3UTR CCA 90 bp | ACAAATCAACAAATTAGGCCCCATAGAGATGGTCTGACTTTCATAAGGTTATCACAGCAGTTGGTTCTCTaGCAATCAAAAATAATTTTG | + |
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Preference number: 2 (lower is better) Translates to: TNQQIRPHRDGLTFIRLSQQLVL*QSKIIL Trigger: CAAAATTATTTTTGATTGCCAGAGAACCAACTGCTG...TGATAACCTTATGAAAGTCAGACCATCTCTATGGGGCCTAATTTGTTGATTTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR TCA 72 bp | GGAGGTGATTGGTCCAATAGTGATGCTGCAGAGAGGTaGGGGGAGAGCAACATCTTGCCAGACATTTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: GGDWSNSDAAER*GESNILPDIWR Trigger: TCTCCAAATGTCTGGCAAGATGTTGCTCTCCCCTCACCTCTCTGCAGCATCACTATTGGACCAATCACCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR GCA 72 bp | TCTTGCCAGACATTTGGAGAGCAGGAGAGCAATGGTTaGCAAAACGACCAGAATCCAGCCCAGCATCTACAC | + |
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Preference number: 3 (lower is better) Translates to: SCQTFGEQESNG*QNDQNPAQHLH Trigger: GTGTAGATGCTGGGCTGGATTCTGGTCGTTTTGGCAACCATTGCTCTCCTGCTCTCCAAATGTCTGGCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR CCA 72 bp | AGGGACCCTGTGAGGTGTCACCCACACATAGAAGATTaGGTACAGAGATTTCTCTCCAGTCCTGACACGAAG | + |
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Preference number: 3 (lower is better) Translates to: RDPVRCHPHIED*VQRFLSSPDTK Trigger: CTTCGTGTCAGGACTGGAGAGAAATCTCTGTACCCAATCTTCTATGTGTGGGTGACACCTCACAGGGTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| 3UTR CCA 72 bp | AACATCTTGCCAGACATTTGGAGAGCAGGAGAGCAATaGTTGCCAAAACGACCAGAATCCAGCCCAGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: NILPDIWRAGEQ*LPKRPESSPAS Trigger: AGATGCTGGGCTGGATTCTGGTCGTTTTGGCAACCATTGCTCTCCTGCTCTCCAAATGTCTGGCAAGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTTGGAGAGCAGGAGAGCAATGGTTGCCAAAACGACCAGAATCCAGCCCAGCAAGGTCTTCAGTGACTaGCTATCAAGTATTCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: HLESRRAMVAKTTRIQPSKVFSD*LSSIHS Trigger: TGAATGAATACTTGATAGCAAGTCACTGAAGACCTT...GCTGGGCTGGATTCTGGTCGTTTTGGCAACCATTGCTCTCCTGCTCTCCAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| 3UTR TCA 72 bp | TTTCAACCTGTGTGGCACGACTCCTTAAGAGTTGAATaGCACGTTCACAGGGGTCACCTAAGACCATTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FQPVWHDSLRVE*HVHRGHLRPLE Trigger: TTCCAATGGTCTTAGGTGACCCCTGTGAACGTGTCATTCAACTCTTAAGGAGTCGTGCCACACAGGTTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR TCA 72 bp | TGCTTTTCAACCTGTGTGGCACGACTCCTTAAGAGTTaGATGACACGTTCACAGGGGTCACCTAAGACCATT | + |
|
Preference number: 3 (lower is better) Translates to: CFSTCVARLLKS*MTRSQGSPKTI Trigger: AATGGTCTTAGGTGACCCCTGTGAACGTGTCATTCAACTCTTAAGGAGTCGTGCCACACAGGTTGAAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR GCA 72 bp | GACACTAATGGCAGCCTCCCAAGGTCTTCAGTGACTTaGTATCAAGTATTCATTCACACACACGTCTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: DTNGSLPRSSVT*YQVFIHTHVFL Trigger: CAGGAAGACGTGTGTGTGAATGAATACTTGATAGCAAGTCACTGAAGACCTTGGGAGGCTGCCATTAGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAGTCATCATGAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTGGGGAGAGCAACATCTaGCCAGACATTTGGAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: NSHHEHVMELYKDGELLTGESNI*PDIWRA Trigger: TGCTCTCCAAATGTCTGGCAAGATGTTGCTCTCCCC...AGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTCATGATGACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| 3UTR TCA 72 bp | ATTATGTGTATGTTTCTCTGTGGGGTTATGGTCCTGTaGGACAGGTACCTGTGGAGGCCAGAAGTGTTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: IMCMFLCGVMVL*DRYLWRPEVLD Trigger: ATCTAACACTTCTGGCCTCCACAGGTACCTGTCTCACAGGACCATAACCCCACAGAGAAACATACACATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR TCA 72 bp | CTCTCCAGTCCTGACACGAAGGGATACGAATATGTTTaGTGTCTTCACTCCCAGGAACGAAGCCAAATACTT | + |
|
Preference number: 3 (lower is better) Translates to: LSSPDTKGYEYV*CLHSQERSQIL Trigger: AAGTATTTGGCTTCGTTCCTGGGAGTGAAGACATCAAACATATTCGTATCCCTTCGTGTCAGGACTGGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| 3UTR GCA 72 bp | GTCTTCCTCCTGTACCATCTCCCTGACTCTAATCTGTaGATGTATGCTACATTTAGAACCACCACTGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VFLLYHLPDSNL*MYATFRTTTGD Trigger: ATCTCCAGTGGTGGTTCTAAATGTAGCATACATGCACAGATTAGAGTCAGGGAGATGGTACAGGAGGAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTTGATGTCTTCACTCCCAGGAACGAAGCCAAATACTTTCTTGATTCGATGCATCTTGCCAGACATTaGGAGAGCAGGAGAGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: MFDVFTPRNEAKYFLDSMHLARH*ESRRAM Trigger: CATTGCTCTCCTGCTCTCCAAATGTCTGGCAAGATG...CATCGAATCAAGAAAGTATTTGGCTTCGTTCCTGGGAGTGAAGACATCAAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| 3UTR TCA 72 bp | CCAGTATCGAGCCGAGCAACACAGCTAAATTCCAATTaGCTTAAATTCCCATGCCCATACAAATTGGACGGT | + |
|
Preference number: 3 (lower is better) Translates to: PVSSRATQLNSN*LKFPCPYKLDG Trigger: ACCGTCCAATTTGTATGGGCATGGGAATTTAAGTCAATTGGAATTTAGCTGTGTTGCTCGGCTCGATACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
||
| 3UTR TCA 72 bp | ATTATGGGCATAGGACAAAATAGCACTCCAAATTATTaGTGCTTGCACCAGTATCGAGCCGAGCAACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: IMGIGQNSTPNY*CLHQYRAEQHS Trigger: GCTGTGTTGCTCGGCTCGATACTGGTGCAAGCATCAATAATTTGGAGTGCTATTTTGTCCTATGCCCATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR TCA 72 bp | ACAAGTAATTTTACTGGTTGGGGGATCATCACAACATaGGGAACTGTATTAAAGGGTCCCAGGATTAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TSNFTGWGIITT*GTVLKGPRIRR Trigger: CCTCCTAATCCTGGGACCCTTTAATACAGTTCCTCATGTTGTGATGATCCCCCAACCAGTAAAATTACTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR GCA 72 bp | ATAAACCAAACTCAGGTTCTTCAGCAGAGAAGTATTTaGTCTTACCCAATGAGCCATCCTTCCAGCATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: INQTQVLQQRSI*SYPMSHPSSIS Trigger: AGAGATGCTGGAAGGATGGCTCATTGGGTAAGAGCAAATACTTCTCTGCTGAAGAACCTGAGTTTGGTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR GCA 72 bp | ACTTTCTTGATTCGATGTCTAATAAGAAGTTGGGAATaGTCCTCAGCAGCTTTCTCAAAGAGCACTCTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: TFLIRCLIRSWE*SSAAFSKSTLS Trigger: CGAGAGAGTGCTCTTTGAGAAAGCTGCTGAGGAGCATTCCCAACTTCTTATTAGACATCGAATCAAGAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTCTATATATTGATTCACTGACTTTCCTATaGGAGGGAACTGAGTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: EHVMELYKDGELLTLYIDSLTFL*EGTEWP Trigger: AGGCCACTCAGTTCCCTCCAATAGGAAAGTCAGTGA...ATCAATATATAGAGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR TCA 72 bp | GTCCTTAAAGAGGTTTGGGAACATAAAGGAACAATTTaGCAAGGAAAAGTTACAGTTGGGACCCCTGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VLKEVWEHKGTI*QGKVTVGTPVV Trigger: CACAACAGGGGTCCCAACTGTAACTTTTCCTTGTCAAATTGTTCCTTTATGTTCCCAAACCTCTTTAAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR-3UTR CAA 90 bp | TATTTGATAATAAATGGTGGTGAAGATGACGCTGTGATGGACACTAATGGCAGCTTCGACTGGGTATTATaGCAGCATTTCAGGATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: YLIINGGEDDAVMDTNGSFDWVL*QHFRIL Trigger: CAGAATCCTGAAATGCTGCAATAATACCCAGTCGAA...GCTGCCATTAGTGTCCATCACAGCGTCATCTTCACCACCATTTATTATCAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| 3UTR-3UTR CAA 90 bp | GATGGAGAGCTTCTCACTCTATATATTGATTTCGGAAATAGGACTTTGGATGGACTTAACGTAAAAGTATaGCAGGCTCATGTCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DGELLTLYIDFGNRTLDGLNVKV*QAHVFL Trigger: GAGGAAGACATGAGCCTGCAATACTTTTACGTTAAG...TCCATCCAAAGTCCTATTTCCGAAATCAATATATAGAGTGAGAAGCTCTCCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| 3UTR CCA 72 bp | CCAAATACTTTCTTGATTCGATGTCTAATAAGAAGTTaGGAATGCTCCTCAGCAGCTTTCTCAAAGAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: PNTFLIRCLIRS*ECSSAAFSKST Trigger: AGTGCTCTTTGAGAAAGCTGCTGAGGAGCATTCCCAACTTCTTATTAGACATCGAATCAAGAAAGTATTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAATCAACAAATTAGGCCCCATAGAGATGGTCTGACTTTCATAAGGTTATCAGAAAGTGATGCTGGTTaGTGGTCACCATATGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TNQQIRPHRDGLTFIRLSESDAG*WSPYEK Trigger: CTTTTCATATGGTGACCACAAACCAGCATCACTTTC...TGATAACCTTATGAAAGTCAGACCATCTCTATGGGGCCTAATTTGTTGATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR TCA 72 bp | GTTTTTCTCTTACAAGCCTTCACAAGCTCGTCTTTCTaGGCTGGTTTTGTGATTAGTCAACACAAACTAACA | + |
|
Preference number: 3 (lower is better) Translates to: VFLLQAFTSSSF*AGFVISQHKLT Trigger: TGTTAGTTTGTGTTGACTAATCACAAAACCAGCTCAGAAAGACGAGCTTGTGAAGGCTTGTAAGAGAAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTCTATATATTGATAAAGCAGAATGCCAGTaGATGTCTTTTAGAGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: EHVMELYKDGELLTLYIDKAECQ*MSFRES Trigger: GCTTTCTCTAAAAGACATCAACTGGCATTCTGCTTT...ATCAATATATAGAGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR GCA 72 bp | AAACTTCCTCTGACTTTTTCTTCGACTGGGTATTATTaGAGCATTTCAGGATTCTGCGTCTTGATTTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: KLPLTFSSTGYY*SISGFCVLILF Trigger: AAATAAAATCAAGACGCAGAATCCTGAAATGCTGCAATAATACCCAGTCGAAGAAAAAGTCAGAGGAAGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| 3UTR TCA 72 bp | CTTACTTGTTTCTGTCAAGTCAAAGCTCCCAGAATTTaGCACAAAATAGAACCTCTCATAACTGTATACAAA | + |
|
Preference number: 3 (lower is better) Translates to: LTCFCQVKAPRI*HKIEPLITVYK Trigger: TTTGTATACAGTTATGAGAGGTTCTATTTTGTGTCAAATTCTGGGAGCTTTGACTTGACAGAAACAAGTAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR CAA 72 bp | AGAGAGGTGAGGGGAGAGCAACATCTTGCCAGACATTaGGAGAGCAGGAGAGCAATGGTTGCCAAAACGACC | + |
|
Preference number: 4 (lower is better) Translates to: REVRGEQHLARH*ESRRAMVAKTT Trigger: GGTCGTTTTGGCAACCATTGCTCTCCTGCTCTCCAAATGTCTGGCAAGATGTTGCTCTCCCCTCACCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| 3UTR CAA 72 bp | CTGGCTCAGAAGGTAAGCTTTCTCTGTTTGAGTTTGTaGAGGAGAGGGCTTCAGAAGCCGTCAGAGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LAQKVSFLCLSL*RRGLQKPSEAV Trigger: AACAGCCTCTGACGGCTTCTGAAGCCCTCTCCTCAACAAACTCAAACAGAGAAAGCTTACCTTCTGAGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR CAA 72 bp | ATCTTGCCAGACATTTGGAGAGCAGGAGAGCAATGGTaGCCAAAACGACCAGAATCCAGCCCAGCATCTACA | + |
|
Preference number: 4 (lower is better) Translates to: ILPDIWRAGEQW*PKRPESSPAST Trigger: TGTAGATGCTGGGCTGGATTCTGGTCGTTTTGGCAACCATTGCTCTCCTGCTCTCCAAATGTCTGGCAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| CDS-3UTR GCA 90 bp | AACAGTCATCATGAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTTCCTCTCCAGAGGGCTaGTTCTCCGGTATGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSHHEHVMELYKDGELLTSSPEG*FSGMEG Trigger: CCCCTCCATACCGGAGAAGCAGCCCTCTGGAGAGGA...AGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTCATGATGACTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
||
| CDS-3UTR CCA 90 bp | TATTTGATAATAAATGGTGGTGAAGATGACGCTGTGATGGACACTAATGGCAGCGCTGCTTCTCCGGTATaGAGGGGTACAGCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YLIINGGEDDAVMDTNGSAASPV*RGTAAA Trigger: TGCTGCAGCTGTACCCCTCCATACCGGAGAAGCAGC...GCTGCCATTAGTGTCCATCACAGCGTCATCTTCACCACCATTTATTATCAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| CDS-3UTR CCA 90 bp | AACAGTCATCATGAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTCGTCAACCATGTCAGTaGAGCAACCAGAGCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NSHHEHVMELYKDGELLTRQPCQ*SNQSPP Trigger: GGGAGGGCTCTGGTTGCTCCACTGACATGGTTGACG...AGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTCATGATGACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
||
| CDS-3UTR TCA 90 bp | AACAGTCATCATGAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTGATGCTGCAGAGAGGTaGGGGGAGAGCAACATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NSHHEHVMELYKDGELLTDAAER*GESNIL Trigger: CAAGATGTTGCTCTCCCCTCACCTCTCTGCAGCATC...AGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTCATGATGACTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| CDS-3UTR GCA 90 bp | TTCCTTAGGTCCTTAAAGAGGTTTGGGAACATAAAGGAACAATTTGACAAGGAATCCTCTCCAGAGGGCTaGTTCTCCGGTATGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLRSLKRFGNIKEQFDKESSPEG*FSGMEG Trigger: CCCCTCCATACCGGAGAAGCAGCCCTCTGGAGAGGA...TTCCTTGTCAAATTGTTCCTTTATGTTCCCAAACCTCTTTAAGGACCTAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| CDS-3UTR CCA 90 bp | AACAGTCATCATGAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTAGCAGCAGTACTCGCTaGCAACTGTCCACATTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSHHEHVMELYKDGELLTSSSTR*QLSTFG Trigger: GCCAAATGTGGACAGTTGCCAGCGAGTACTGCTGCT...AGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTCATGATGACTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
||
| 3UTR CAA 72 bp | GAGAGGGCTTCAGAAGCCGTCAGAGGCTGTTTCCTATaGTTAAGTCCTAAGCAACTATTAATCTTCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ERASEAVRGCFL*LSPKQLLIFLV Trigger: CACCAGGAAGATTAATAGTTGCTTAGGACTTAACAATAGGAAACAGCCTCTGACGGCTTCTGAAGCCCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| CDS-3UTR TCA 90 bp | GATGGAGAGCTTCTCACTCTATATATTGATTTCGGAAATAGGACTTTGGATGGACACATCAGAGGGAGCTaGCGTGTAGCATGGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: DGELLTLYIDFGNRTLDGHIRGS*RVAWKS Trigger: GGATTTCCATGCTACACGTCAGCTCCCTCTGATGTG...TCCATCCAAAGTCCTATTTCCGAAATCAATATATAGAGTGAGAAGCTCTCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCCTTAAAGAGGTTTGGGAACATAAAGGAACAATTTGACAAGGAAAAGTTAGCTGCTTCTCCGGTATaGAGGGGTACAGCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSLKRFGNIKEQFDKEKLAASPV*RGTAAA Trigger: TGCTGCAGCTGTACCCCTCCATACCGGAGAAGCAGC...TAACTTTTCCTTGTCAAATTGTTCCTTTATGTTCCCAAACCTCTTTAAGGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR CAA 72 bp | CCCCATAGAGATGGTCTGACTTTCATAAGGTTATCATaGGTTGACAGTGAGTTCAGGACAATTTCCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHRDGLTFIRLS*VDSEFRTISWP Trigger: TGGCCAGGAAATTGTCCTGAACTCACTGTCAACCAATGATAACCTTATGAAAGTCAGACCATCTCTATGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| CDS-3UTR CCA 90 bp | TTCCTTAGGTCCTTAAAGAGGTTTGGGAACATAAAGGAACAATTTGACAAGGAAAGCAGCAGTACTCGCTaGCAACTGTCCACATTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLRSLKRFGNIKEQFDKESSSTR*QLSTFG Trigger: GCCAAATGTGGACAGTTGCCAGCGAGTACTGCTGCT...TTCCTTGTCAAATTGTTCCTTTATGTTCCCAAACCTCTTTAAGGACCTAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR CAA 72 bp | TATAAACCAAACTCAGGTTCTTCAGCAGAGAAGTATTaGCTCTTACCCAATGAGCCATCCTTCCAGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: YKPNSGSSAEKY*LLPNEPSFQHL Trigger: GAGATGCTGGAAGGATGGCTCATTGGGTAAGAGCAAATACTTCTCTGCTGAAGAACCTGAGTTTGGTTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR CAA 72 bp | GCCAAATACTTTCTTGATTCGATGTCTAATAAGAAGTaGGGAATGCTCCTCAGCAGCTTTCTCAAAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKYFLDSMSNKK*GMLLSSFLKEH Trigger: GTGCTCTTTGAGAAAGCTGCTGAGGAGCATTCCCAACTTCTTATTAGACATCGAATCAAGAAAGTATTTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
||
| CDS-3UTR GCA 90 bp | CATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTCTATATATTGATTTCGGGAGAGCAACATCTTaGCAGACATTTGGAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HVMELYKDGELLTLYIDFGRATS*QTFGEQ Trigger: CTGCTCTCCAAATGTCTGGCAAGATGTTGCTCTCCC...GAAATCAATATATAGAGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| CDS-3UTR CCA 90 bp | GAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTCTATATATTGATATCTTGCCAGACATTTaGAGAGCAGGAGAGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: EHVMELYKDGELLTLYIDILPDI*RAGEQW Trigger: CCATTGCTCTCCTGCTCTCCAAATGTCTGGCAAGAT...ATCAATATATAGAGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR CAA 72 bp | AACATAAAGGAACAATTTGACAAGGAAAAGTTACAGTaGGGACCCCTGTTGTGGATCATAGAAGGGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NIKEQFDKEKLQ*GPLLWIIEGKL Trigger: AAGCTTCCCTTCTATGATCCACAACAGGGGTCCCAACTGTAACTTTTCCTTGTCAAATTGTTCCTTTATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| CDS-3UTR TCA 90 bp | TTCCTTAGGTCCTTAAAGAGGTTTGGGAACATAAAGGAACAATTTGACAAGGAAGGATACGAATATGTTTaGTGTCTTCACTCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLRSLKRFGNIKEQFDKEGYEYV*CLHSQE Trigger: TTCCTGGGAGTGAAGACATCAAACATATTCGTATCC...TTCCTTGTCAAATTGTTCCTTTATGTTCCCAAACCTCTTTAAGGACCTAAGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| CDS-3UTR GCA 90 bp | AGGTCCTTAAAGAGGTTTGGGAACATAAAGGAACAATTTGACAAGGAAAAGTTAAGAGGCAAACTCACTTaGTGCACATTCATAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSLKRFGNIKEQFDKEKLRGKLT*CTFIVG Trigger: ACCTACTATGAATGTGCAGCAAGTGAGTTTGCCTCT...TAACTTTTCCTTGTCAAATTGTTCCTTTATGTTCCCAAACCTCTTTAAGGACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| CDS-3UTR GCA 90 bp | CATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTCTATATATTGATTTCAGAGGCAAACTCACTTaGTGCACATTCATAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HVMELYKDGELLTLYIDFRGKLT*CTFIVG Trigger: ACCTACTATGAATGTGCAGCAAGTGAGTTTGCCTCT...GAAATCAATATATAGAGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCCTTAAAGAGGTTTGGGAACATAAAGGAACAATTTGACAAGGAAAAGTTACCACACATAGAAGATTaGGTACAGAGATTTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSLKRFGNIKEQFDKEKLPHIED*VQRFLS Trigger: GGAGAGAAATCTCTGTACCCAATCTTCTATGTGTGG...TAACTTTTCCTTGTCAAATTGTTCCTTTATGTTCCCAAACCTCTTTAAGGACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
||
| 3UTR CAA 72 bp | CTTCTCACTCTATATATTGATTTCGGAAATAGGACTTaGGATGGACTTCTGTCCATAAGTGTCAGAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLTLYIDFGNRT*DGLLSISVREK Trigger: TTTCTCTCTGACACTTATGGACAGAAGTCCATCCAAAGTCCTATTTCCGAAATCAATATATAGAGTGAGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| 3UTR CAA 72 bp | GTTGATCTCCTTGAAAGTCAAGATGACCATCAGCAGTaGGTTCTCTGGCAATCAAAAATAATTTTGGCTAAA | + |
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Preference number: 4 (lower is better) Translates to: VDLLESQDDHQQ*VLWQSKIILAK Trigger: TTTAGCCAAAATTATTTTTGATTGCCAGAGAACCAACTGCTGATGGTCATCTTGACTTTCAAGGAGATCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR CAA 72 bp | TCTTACTTGTTTCTGTCAAGTCAAAGCTCCCAGAATTaGACACAAAATAGAACCTCTCATAACTGTATACAA | + |
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Preference number: 4 (lower is better) Translates to: SYLFLSSQSSQN*TQNRTSHNCIQ Trigger: TTGTATACAGTTATGAGAGGTTCTATTTTGTGTCAAATTCTGGGAGCTTTGACTTGACAGAAACAAGTAAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| 3UTR CAA 72 bp | GGATTAGGAGGGTTGAAAACCACTGCTCTGTATCCATaGATTAACCTACATAACAGTGAATATAAACATTTT | + |
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Preference number: 4 (lower is better) Translates to: GLGGLKTTALYP*INLHNSEYKHF Trigger: AAAATGTTTATATTCACTGTTATGTAGGTTAATCAATGGATACAGAGCAGTGGTTTTCAACCCTCCTAATCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| CDS CCA 90 bp | CATGAGGCAAGCCAATCTCCTCTCCAGAGGGCTGCTTCTCCGGTATaGAGGGGTACAGCTGCAGCAGCAGTACTCGCTGGCAACTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: HEASQSPLQRAASPV*RGTAAAAVLAGNCP Trigger: TGGACAGTTGCCAGCGAGTACTGCTGCTGCAGCTGTACCCCTCCATACCGGAGAAGCAGCCCTCTGGAGAGGAGATTGGCTTGCCTCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS GCA 90 bp | ATCTCCTCTCCAGAGGGCTGCTTCTCCGGTATGGAGGGGTACAGCTaGAGCAGCAGTACTCGCTGGCAACTGTCCACATTTGGCCTCGTA | + |
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Preference number: 5 (lower is better) Translates to: ISSPEGCFSGMEGYS*SSSTRWQLSTFGLV Trigger: TACGAGGCCAAATGTGGACAGTTGCCAGCGAGTACTGCTGCTGCAGCTGTACCCCTCCATACCGGAGAAGCAGCCCTCTGGAGAGGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS CCA 90 bp | TGCTTCTCCGGTATGGAGGGGTACAGCTGCAGCAGCAGTACTCGCTaGCAACTGTCCACATTTGGCCTCGTAGAGCATAGCCAGCAATCA | + |
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Preference number: 5 (lower is better) Translates to: CFSGMEGYSCSSSTR*QLSTFGLVEHSQQS Trigger: TGATTGCTGGCTATGCTCTACGAGGCCAAATGTGGACAGTTGCCAGCGAGTACTGCTGCTGCAGCTGTACCCCTCCATACCGGAGAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS CCA 90 bp | TTCATAGTAGGTACCTGTCAGCAGGGTCACCGTCAACCATGTCAGTaGAGCAACCAGAGCCCTCCCAGTGATGTCGAAGAACATGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: FIVGTCQQGHRQPCQ*SNQSPPSDVEEHEA Trigger: TGCCTCATGTTCTTCGACATCACTGGGAGGGCTCTGGTTGCTCCACTGACATGGTTGACGGTGACCCTGCTGACAGGTACCTACTATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS GCA 90 bp | ATTAGCAAACATCGGGTATTGGTCCACAGAGGCAAACTCACTTGCTaGACATTCATAGTAGGTACCTGTCAGCAGGGTCACCGTCAACCA | + |
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Preference number: 5 (lower is better) Translates to: ISKHRVLVHRGKLTC*TFIVGTCQQGHRQP Trigger: TGGTTGACGGTGACCCTGCTGACAGGTACCTACTATGAATGTGCAGCAAGTGAGTTTGCCTCTGTGGACCAATACCCGATGTTTGCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS GCA 90 bp | GACATTAGCAAACATCGGGTATTGGTCCACAGAGGCAAACTCACTTaGTGCACATTCATAGTAGGTACCTGTCAGCAGGGTCACCGTCAA | + |
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Preference number: 5 (lower is better) Translates to: DISKHRVLVHRGKLT*CTFIVGTCQQGHRQ Trigger: TTGACGGTGACCCTGCTGACAGGTACCTACTATGAATGTGCAGCAAGTGAGTTTGCCTCTGTGGACCAATACCCGATGTTTGCTAATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS-3UTR CAA 90 bp | GGACCCTGTGAGGTGTCACCCACACATAGAAGATTGGGTACAGAGATTTCTCTCATAAGAGGAGAACAGTaGCTGTCCGCAAACAGTCAA | + |
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Preference number: 5 (lower is better) Translates to: GPCEVSPTHRRLGTEISLIRGEQ*LSANSQ Trigger: TTGACTGTTTGCGGACAGCAACTGTTCTCCTCTTAT...GAGAGAAATCTCTGTACCCAATCTTCTATGTGTGGGTGACACCTCACAGGGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218239.2 |
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| CDS-3UTR CAA 90 bp | AACAGTCATCATGAGCATGTGATGGAACTGTATAAAGATGGAGAGCTTCTCACTCAGAGGCAAACTCACTaGCTGCACATTCATAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: NSHHEHVMELYKDGELLTQRQTH*LHIHSR Trigger: CCTACTATGAATGTGCAGCAAGTGAGTTTGCCTCTG...AGTGAGAAGCTCTCCATCTTTATACAGTTCCATCACATGCTCATGATGACTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS-3UTR CAA 90 bp | TTCCTTAGGTCCTTAAAGAGGTTTGGGAACATAAAGGAACAATTTGACAAGGAAGGGGAGAGCAACATCTaGCCAGACATTTGGAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: FLRSLKRFGNIKEQFDKEGESNI*PDIWRA Trigger: TGCTCTCCAAATGTCTGGCAAGATGTTGCTCTCCCC...TTCCTTGTCAAATTGTTCCTTTATGTTCCCAAACCTCTTTAAGGACCTAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| CDS-3UTR CAA 90 bp | GATGGAGAGCTTCTCACTCTATATATTGATTTCGGAAATAGGACTTTGGATGGACAGAGGCAAACTCACTaGCTGCACATTCATAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: DGELLTLYIDFGNRTLDGQRQTH*LHIHSR Trigger: CCTACTATGAATGTGCAGCAAGTGAGTTTGCCTCTG...TCCATCCAAAGTCCTATTTCCGAAATCAATATATAGAGTGAGAAGCTCTCCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS-3UTR CAA 90 bp | TTCCTTAGGTCCTTAAAGAGGTTTGGGAACATAAAGGAACAATTTGACAAGGAACATCTTGCCAGACATTaGGAGAGCAGGAGAGCAATG | + |
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Preference number: 5 (lower is better) Translates to: FLRSLKRFGNIKEQFDKEHLARH*ESRRAM Trigger: CATTGCTCTCCTGCTCTCCAAATGTCTGGCAAGATG...TTCCTTGTCAAATTGTTCCTTTATGTTCCCAAACCTCTTTAAGGACCTAAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| CDS-3UTR CAA 90 bp | GATGGAGAGCTTCTCACTCTATATATTGATTTCGGAAATAGGACTTTGGATGGAAGCATCTCTTCTCGTTaGCTAGGAGTGACATTAGCA | + |
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Preference number: 5 (lower is better) Translates to: DGELLTLYIDFGNRTLDGSISSR*LGVTLA Trigger: TGCTAATGTCACTCCTAGCAAACGAGAAGAGATGCT...TCCATCCAAAGTCCTATTTCCGAAATCAATATATAGAGTGAGAAGCTCTCCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS-3UTR CAA 90 bp | TTCCTTAGGTCCTTAAAGAGGTTTGGGAACATAAAGGAACAATTTGACAAGGAAATAAGAGGAGAACAGTaGCTGTCCGCAAACAGTCAA | + |
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Preference number: 5 (lower is better) Translates to: FLRSLKRFGNIKEQFDKEIRGEQ*LSANSQ Trigger: TTGACTGTTTGCGGACAGCAACTGTTCTCCTCTTAT...TTCCTTGTCAAATTGTTCCTTTATGTTCCCAAACCTCTTTAAGGACCTAAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| CDS-3UTR CAA 90 bp | ACAAATCAACAAATTAGGCCCCATAGAGATGGTCTGACTTTCATAAGGTTATCAATGTCTAATAAGAAGTaGGGAATGCTCCTCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TNQQIRPHRDGLTFIRLSMSNKK*GMLLSS Trigger: GCTGCTGAGGAGCATTCCCAACTTCTTATTAGACAT...TGATAACCTTATGAAAGTCAGACCATCTCTATGGGGCCTAATTTGTTGATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| CDS-3UTR CAA 90 bp | AGGTCCTTAAAGAGGTTTGGGAACATAAAGGAACAATTTGACAAGGAAAAGTTAGGGATACGAATATGTTaGATGTCTTCACTCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: RSLKRFGNIKEQFDKEKLGIRIC*MSSLPG Trigger: TCCTGGGAGTGAAGACATCAAACATATTCGTATCCC...TAACTTTTCCTTGTCAAATTGTTCCTTTATGTTCCCAAACCTCTTTAAGGACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| CDS CCA 72 bp | AGCCAATCTCCTCTCCAGAGGGCTGCTTCTCCGGTATaGAGGGGTACAGCTGCAGCAGCAGTACTCGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SQSPLQRAASPV*RGTAAAAVLAG Trigger: GCCAGCGAGTACTGCTGCTGCAGCTGTACCCCTCCATACCGGAGAAGCAGCCCTCTGGAGAGGAGATTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS GCA 72 bp | CCAGAGGGCTGCTTCTCCGGTATGGAGGGGTACAGCTaGAGCAGCAGTACTCGCTGGCAACTGTCCACATTT | + |
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Preference number: 6 (lower is better) Translates to: PEGCFSGMEGYS*SSSTRWQLSTF Trigger: AAATGTGGACAGTTGCCAGCGAGTACTGCTGCTGCAGCTGTACCCCTCCATACCGGAGAAGCAGCCCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS CCA 72 bp | GGTATGGAGGGGTACAGCTGCAGCAGCAGTACTCGCTaGCAACTGTCCACATTTGGCCTCGTAGAGCATAGC | + |
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Preference number: 6 (lower is better) Translates to: GMEGYSCSSSTR*QLSTFGLVEHS Trigger: GCTATGCTCTACGAGGCCAAATGTGGACAGTTGCCAGCGAGTACTGCTGCTGCAGCTGTACCCCTCCATACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS GCA 72 bp | CATCGGGTATTGGTCCACAGAGGCAAACTCACTTGCTaGACATTCATAGTAGGTACCTGTCAGCAGGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: HRVLVHRGKLTC*TFIVGTCQQGH Trigger: GTGACCCTGCTGACAGGTACCTACTATGAATGTGCAGCAAGTGAGTTTGCCTCTGTGGACCAATACCCGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS CAA 90 bp | GAGAGCAACATCTTGCCAGACATTTGGAGAGCAGGAGAGCAATGGTaGCCAAAACGACCAGAATCCAGCCCAGCATTTGTGACTGGTATC | + |
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Preference number: 6 (lower is better) Translates to: ESNILPDIWRAGEQW*PKRPESSPAFVTGI Trigger: GATACCAGTCACAAATGCTGGGCTGGATTCTGGTCGTTTTGGCAACCATTGCTCTCCTGCTCTCCAAATGTCTGGCAAGATGTTGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| CDS CAA 72 bp | CAAACATCGGGTATTGGTCCACAGAGGCAAACTCACTaGCTGCACATTCATAGTAGGTACCTGTCAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: QTSGIGPQRQTH*LHIHSRYLSAG Trigger: CCCTGCTGACAGGTACCTACTATGAATGTGCAGCAAGTGAGTTTGCCTCTGTGGACCAATACCCGATGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS CAA 72 bp | ATCTTGCCAGACATTTGGAGAGCAGGAGAGCAATGGTaGCCAAAACGACCAGAATCCAGCCCAGCATTTGTG | + |
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Preference number: 6 (lower is better) Translates to: ILPDIWRAGEQW*PKRPESSPAFV Trigger: CACAAATGCTGGGCTGGATTCTGGTCGTTTTGGCAACCATTGCTCTCCTGCTCTCCAAATGTCTGGCAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| CDS GCA 72 bp | AAACATCGGGTATTGGTCCACAGAGGCAAACTCACTTaGTGCACATTCATAGTAGGTACCTGTCAGCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: KHRVLVHRGKLT*CTFIVGTCQQG Trigger: ACCCTGCTGACAGGTACCTACTATGAATGTGCAGCAAGTGAGTTTGCCTCTGTGGACCAATACCCGATGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS CCA 72 bp | AACATCTTGCCAGACATTTGGAGAGCAGGAGAGCAATaGTTGCCAAAACGACCAGAATCCAGCCCAGCATTT | + |
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Preference number: 6 (lower is better) Translates to: NILPDIWRAGEQ*LPKRPESSPAF Trigger: AAATGCTGGGCTGGATTCTGGTCGTTTTGGCAACCATTGCTCTCCTGCTCTCCAAATGTCTGGCAAGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| CDS CCA 72 bp | CGTTTGCTAGGAGTGACATTAGCAAACATCGGGTATTaGTCCACAGAGGCAAACTCACTTGCTGCACATTCA | + |
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Preference number: 6 (lower is better) Translates to: RLLGVTLANIGY*STEANSLAAHS Trigger: TGAATGTGCAGCAAGTGAGTTTGCCTCTGTGGACCAATACCCGATGTTTGCTAATGTCACTCCTAGCAAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS CAA 72 bp | TCGTTTGCTAGGAGTGACATTAGCAAACATCGGGTATaGGTCCACAGAGGCAAACTCACTTGCTGCACATTC | + |
|
Preference number: 6 (lower is better) Translates to: SFARSDISKHRV*VHRGKLTCCTF Trigger: GAATGTGCAGCAAGTGAGTTTGCCTCTGTGGACCAATACCCGATGTTTGCTAATGTCACTCCTAGCAAACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS CAA 90 bp | CATCTCTTCTCGTTTGCTAGGAGTGACATTAGCAAACATCGGGTATaGGTCCACAGAGGCAAACTCACTTGCTGCACATTCATAGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: HLFSFARSDISKHRV*VHRGKLTCCTFIVG Trigger: ACCTACTATGAATGTGCAGCAAGTGAGTTTGCCTCTGTGGACCAATACCCGATGTTTGCTAATGTCACTCCTAGCAAACGAGAAGAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS CCA 72 bp | GCCAAAACGACCAGAATCCAGCCCAGCATTTGTGACTaGTATCTGTGTAGAAGAGCCACTTCATCTCTTATT | + |
|
Preference number: 6 (lower is better) Translates to: AKTTRIQPSICD*YLCRRATSSLI Trigger: AATAAGAGATGAAGTGGCTCTTCTACACAGATACCAGTCACAAATGCTGGGCTGGATTCTGGTCGTTTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048052.7 |
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| CDS CAA 72 bp | TGCTGTCCGCAAACAGTCAAAATCGCTATCAAAGAATaGATGCACGGTTCACTTCTGAGCAGAGAAGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: CCPQTVKIAIKE*MHGSLLSREDE Trigger: TTCATCTTCTCTGCTCAGAAGTGAACCGTGCATCAATTCTTTGATAGCGATTTTGACTGTTTGCGGACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS CAA 90 bp | GAGAACAGTTGCTGTCCGCAAACAGTCAAAATCGCTATCAAAGAATaGATGCACGGTTCACTTCTGAGCAGAGAAGATGAAATACAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ENSCCPQTVKIAIKE*MHGSLLSREDEIQL Trigger: CAACTGTATTTCATCTTCTCTGCTCAGAAGTGAACCGTGCATCAATTCTTTGATAGCGATTTTGACTGTTTGCGGACAGCAACTGTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS CAA 72 bp | TTGACACGGACAACTGAATGTATAAGAGGAGAACAGTaGCTGTCCGCAAACAGTCAAAATCGCTATCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LTRTTECIRGEQ*LSANSQNRYQR Trigger: TCTTTGATAGCGATTTTGACTGTTTGCGGACAGCAACTGTTCTCCTCTTATACATTCAGTTGTCCGTGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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| CDS CAA 90 bp | TTTTCCGACTTGACACGGACAACTGAATGTATAAGAGGAGAACAGTaGCTGTCCGCAAACAGTCAAAATCGCTATCAAAGAATTGATGCA | + |
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Preference number: 6 (lower is better) Translates to: FSDLTRTTECIRGEQ*LSANSQNRYQRIDA Trigger: TGCATCAATTCTTTGATAGCGATTTTGACTGTTTGCGGACAGCAACTGTTCTCCTCTTATACATTCAGTTGTCCGTGTCAAGTCGGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048052.7 ENSMUST00000218239.2 |
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