Pregenerated sensors for CALHM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033033Ensembl transcript IDs: ENSMUST00000035822.2, ENSMUST00000140512.8
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCAGAGCTCATGGAGGGTTCTGAAGGCCTGCTGCTGCAGGAGGTaGCAGACACGTGTGATTTCCCACCAGGTGGTAAAGGTGGCAGTG | + |
|
Preference number: 1 (lower is better) Translates to: LQSSWRVLKACCCRR*QTRVISHQVVKVAV Trigger: CACTGCCACCTTTACCACCTGGTGGGAAATCACACGTGTCTGTCACCTCCTGCAGCAGCAGGCCTTCAGAACCCTCCATGAGCTCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR GCA 90 bp | CCCGGACCCAGAGACGGTCTTTTACACTGGCCAGGTAACCCTTCCTaGACAGGCCTCCCGCCCTTAGTGACTGTGAACGCAGGTTTAAAG | + |
|
Preference number: 1 (lower is better) Translates to: PGPRDGLLHWPGNPS*TGLPPLVTVNAGLK Trigger: CTTTAAACCTGCGTTCACAGTCACTAAGGGCGGGAGGCCTGTGCAGGAAGGGTTACCTGGCCAGTGTAAAAGACCGTCTCTGGGTCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR TCA 90 bp | GCTGTGAGCCTTCCAAGGAGAGGATGCTCCTGTCCTTCAGACTGTTaGGTGACTCGCGGCCAAAGGATCCGGGTGTTGAGAGCAGTCAGA | + |
|
Preference number: 1 (lower is better) Translates to: AVSLPRRGCSCPSDC*VTRGQRIRVLRAVR Trigger: TCTGACTGCTCTCAACACCCGGATCCTTTGGCCGCGAGTCACTCAACAGTCTGAAGGACAGGAGCATCCTCTCCTTGGAAGGCTCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR GCA 90 bp | CCAAACTGTCTCTCATCACCTGCTATGAGGGTGCCAAGCCTGGCCTaGAGACGCACGGTGTTATCATACGGGTCAAGGACTATGGCTGCA | + |
|
Preference number: 1 (lower is better) Translates to: PNCLSSPAMRVPSLA*RRTVLSYGSRTMAA Trigger: TGCAGCCATAGTCCTTGACCCGTATGATAACACCGTGCGTCTGCAGGCCAGGCTTGGCACCCTCATAGCAGGTGATGAGAGACAGTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR GCA 90 bp | GTGTCCCAGACACTGGGAAGTAGCTCAGTGGGTAAAGGTGCTTGCTaGAGCCCGAGTCAAGTTCCCTGGTCCCTCATAGTGAAGGAAGAG | + |
|
Preference number: 1 (lower is better) Translates to: VSQTLGSSSVGKGAC*SPSQVPWSLIVKEE Trigger: CTCTTCCTTCACTATGAGGGACCAGGGAACTTGACTCGGGCTGCAGCAAGCACCTTTACCCACTGAGCTACTTCCCAGTGTCTGGGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CCA 90 bp | GCCTGGCCTGCAGACGCACGGTGTTATCATACGGGTCAAGGACTATaGCTGCATTGTGAAGTTCTACAACGATGTGCAGGGGCTAGTGCC | + |
|
Preference number: 1 (lower is better) Translates to: AWPADARCYHTGQGL*LHCEVLQRCAGASA Trigger: GGCACTAGCCCCTGCACATCGTTGTAGAACTTCACAATGCAGCCATAGTCCTTGACCCGTATGATAACACCGTGCGTCTGCAGGCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR TCA 90 bp | GTGTCGGATGCCGGGAATCAAGACAGACAGGAAGAAGGTGAGGTTTaGGAGAGTGGAGCTAGTCGATGCAGGGCTGAGAAGGGAGAAGAG | + |
|
Preference number: 1 (lower is better) Translates to: VSDAGNQDRQEEGEV*ESGASRCRAEKGEE Trigger: CTCTTCTCCCTTCTCAGCCCTGCATCGACTAGCTCCACTCTCTCAAACCTCACCTTCTTCCTGTCTGTCTTGATTCCCGGCATCCGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR TCA 90 bp | ACGTGTGATTTCCCACCAGGTGGTAAAGGTGGCAGTGCTGAGCTGTaGGCCTTCCAAGGAGAGGATGCTCCTGTCCTTCAGACTGTTGAG | + |
|
Preference number: 1 (lower is better) Translates to: TCDFPPGGKGGSAEL*AFQGEDAPVLQTVE Trigger: CTCAACAGTCTGAAGGACAGGAGCATCCTCTCCTTGGAAGGCTCACAGCTCAGCACTGCCACCTTTACCACCTGGTGGGAAATCACACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR GCA 90 bp | GAAGAGAACCTTGCTCTGAGCTGTGCACACATACATCATGCCACCTaGATACCTCCCCCACCCCAATCATACATGCACCATGGCGTGTCC | + |
|
Preference number: 1 (lower is better) Translates to: EENLALSCAHIHHAT*IPPPPQSYMHHGVS Trigger: GGACACGCCATGGTGCATGTATGATTGGGGTGGGGGAGGTATGCAGGTGGCATGATGTATGTGTGCACAGCTCAGAGCAAGGTTCTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CCA 90 bp | CTCAGTGAGATTGTCAAGAGACTCAGCCCTTGGGCATCACCTTTGTaGTCTCCTTTAGTGCCATCTCCCCTCACGTTGGGCTGTATGCCC | + |
|
Preference number: 1 (lower is better) Translates to: LSEIVKRLSPWASPL*SPLVPSPLTLGCMP Trigger: GGGCATACAGCCCAACGTGAGGGGAGATGGCACTAAAGGAGACCACAAAGGTGATGCCCAAGGGCTGAGTCTCTTGACAATCTCACTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR CCA 90 bp | GAGCAGTCAGAAGAAAACAGGAGCTGTGCGCATCGGGCAGGTACCTaGGCAGTGACCTTGTCTTACAGTGACAGTGTTCCTGGAGAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: EQSEENRSCAHRAGT*AVTLSYSDSVPGEE Trigger: TTCCTCTCCAGGAACACTGTCACTGTAAGACAAGGTCACTGCCCAGGTACCTGCCCGATGCGCACAGCTCCTGTTTTCTTCTGACTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR GCA 90 bp | GGCCTGCAGACGCACGGTGTTATCATACGGGTCAAGGACTATGGCTaGATTGTGAAGTTCTACAACGATGTGCAGGGGCTAGTGCCTAAG | + |
|
Preference number: 1 (lower is better) Translates to: GLQTHGVIIRVKDYG*IVKFYNDVQGLVPK Trigger: CTTAGGCACTAGCCCCTGCACATCGTTGTAGAACTTCACAATGCAGCCATAGTCCTTGACCCGTATGATAACACCGTGCGTCTGCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR GCA 90 bp | CCCGAGTCAAGTTCCCTGGTCCCTCATAGTGAAGGAAGAGAACCTTaGTCTGAGCTGTGCACACATACATCATGCCACCTGCATACCTCC | + |
|
Preference number: 1 (lower is better) Translates to: PESSSLVPHSEGREP*SELCTHTSCHLHTS Trigger: GGAGGTATGCAGGTGGCATGATGTATGTGTGCACAGCTCAGAGCAAGGTTCTCTTCCTTCACTATGAGGGACCAGGGAACTTGACTCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR GCA 90 bp | AAAGTGTCCCAGACACTGGGAAGTAGCTCAGTGGGTAAAGGTGCTTaGTGCAGCCCGAGTCAAGTTCCCTGGTCCCTCATAGTGAAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: KVSQTLGSSSVGKGA*CSPSQVPWSLIVKE Trigger: TTCCTTCACTATGAGGGACCAGGGAACTTGACTCGGGCTGCAGCAAGCACCTTTACCCACTGAGCTACTTCCCAGTGTCTGGGACACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR GCA 90 bp | AGTGAAGGAAGAGAACCTTGCTCTGAGCTGTGCACACATACATCATaGCACCTGCATACCTCCCCCACCCCAATCATACATGCACCATGG | + |
|
Preference number: 1 (lower is better) Translates to: SEGREPCSELCTHTS*HLHTSPTPIIHAPW Trigger: CCATGGTGCATGTATGATTGGGGTGGGGGAGGTATGCAGGTGGCATGATGTATGTGTGCACAGCTCAGAGCAAGGTTCTCTTCCTTCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR TCA 90 bp | TTCGGGTTCCTGAGGTGGCACACCAGTGGCTGTCTTGCTAACAGATaGCTTGTTGATAGCCTTTGTCTTTCCCGTAGGTTTTGCTCTGTG | + |
|
Preference number: 1 (lower is better) Translates to: FGFLRWHTSGCLANR*LVDSLCLSRRFCSV Trigger: CACAGAGCAAAACCTACGGGAAAGACAAAGGCTATCAACAAGTCATCTGTTAGCAAGACAGCCACTGGTGTGCCACCTCAGGAACCCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CCA 90 bp | AAAGTCTTATTTAAAAAGTGTCCCAGACACTGGGAAGTAGCTCAGTaGGTAAAGGTGCTTGCTGCAGCCCGAGTCAAGTTCCCTGGTCCC | + |
|
Preference number: 1 (lower is better) Translates to: KVLFKKCPRHWEVAQ*VKVLAAARVKFPGP Trigger: GGGACCAGGGAACTTGACTCGGGCTGCAGCAAGCACCTTTACCCACTGAGCTACTTCCCAGTGTCTGGGACACTTTTTAAATAAGACTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR TCA 90 bp | AAAAGATTTGCAGCTGCAATTATTAGAGATAAAAGGTCTTTGGAGTaGCCTATGGCCTTCGGGTTCCTGAGGTGGCACACCAGTGGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: KRFAAAIIRDKRSLE*PMAFGFLRWHTSGC Trigger: ACAGCCACTGGTGTGCCACCTCAGGAACCCGAAGGCCATAGGTCACTCCAAAGACCTTTTATCTCTAATAATTGCAGCTGCAAATCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CCA 90 bp | GCGTGTCCATGCCTCCCACTCTCCTACATACAAACACAAACACCATaGCGCTTATATGCCCTTGGACACACACAACAAATTAACTTCATT | + |
|
Preference number: 1 (lower is better) Translates to: ACPCLPLSYIQTQTP*RLYALGHTQQINFI Trigger: AATGAAGTTAATTTGTTGTGTGTGTCCAAGGGCATATAAGCGCCATGGTGTTTGTGTTTGTATGTAGGAGAGTGGGAGGCATGGACACGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR TCA 90 bp | GCACATCCCGGACCCAGAGACGGTCTTTTACACTGGCCAGGTAACCCTTCCTGCGGCAGTGCTGAGCTGTaGGCCTTCCAAGGAGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: AHPGPRDGLLHWPGNPSCGSAEL*AFQGED Trigger: ATCCTCTCCTTGGAAGGCTCACAGCTCAGCACTGCC...GCAGGAAGGGTTACCTGGCCAGTGTAAAAGACCGTCTCTGGGTCCGGGATGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR CCA 90 bp | GCACATCCCGGACCCAGAGACGGTCTTTTACACTGGCCAGGTAACCCTTCCTGCCTGGAATCCAGTGGATaGAGGCCCACACCAGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: AHPGPRDGLLHWPGNPSCLESSG*RPTPEK Trigger: CTTCTCTGGTGTGGGCCTCCATCCACTGGATTCCAG...GCAGGAAGGGTTACCTGGCCAGTGTAAAAGACCGTCTCTGGGTCCGGGATGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CAA 90 bp | AGCTGTGAGCCTTCCAAGGAGAGGATGCTCCTGTCCTTCAGACTGTaGAGTGACTCGCGGCCAAAGGATCCGGGTGTTGAGAGCAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SCEPSKERMLLSFRL*SDSRPKDPGVESSQ Trigger: CTGACTGCTCTCAACACCCGGATCCTTTGGCCGCGAGTCACTCAACAGTCTGAAGGACAGGAGCATCCTCTCCTTGGAAGGCTCACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTTGGAGTGACCTATGGCCTTCGGGTTCCTGAGGTGGCACACCAGTGGCTGCAGGTACCTGGGCAGTaGCCTTGTCTTACAGTGACA | + |
|
Preference number: 2 (lower is better) Translates to: VFGVTYGLRVPEVAHQWLQVPGQ*PCLTVT Trigger: TGTCACTGTAAGACAAGGTCACTGCCCAGGTACCTG...CAGCCACTGGTGTGCCACCTCAGGAACCCGAAGGCCATAGGTCACTCCAAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CAA 90 bp | AGGACCTGGAGTGATGAGGCAGTGGGCATGCGTTCCTGGTTCTGCTaGGTCCTGGTACTGATAGTTGGCTTCAGTGCCTCCTGTGTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: RTWSDEAVGMRSWFC*VLVLIVGFSASCVL Trigger: TAGCACACAGGAGGCACTGAAGCCAACTATCAGTACCAGGACCAAGCAGAACCAGGAACGCATGCCCACTGCCTCATCACTCCAGGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCCCTGGTCCCTCATAGTGAAGGAAGAGAACCTTGCTCTGAGCTGTGCACAGATCTCCCGGGTCCCTaGAGAGCTCATGGAGGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: SSLVPHSEGREPCSELCTDLPGP*RAHGGF Trigger: GAACCCTCCATGAGCTCTGCAGGGACCCGGGAGATC...TGTGCACAGCTCAGAGCAAGGTTCTCTTCCTTCACTATGAGGGACCAGGGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCCCTGGTCCCTCATAGTGAAGGAAGAGAACCTTGCTCTGAGCTGTGCACATCCCTGCAGAGCTCATaGAGGGTTCTGAAGGCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SSLVPHSEGREPCSELCTSLQSS*RVLKAC Trigger: GCAGGCCTTCAGAACCCTCCATGAGCTCTGCAGGGA...TGTGCACAGCTCAGAGCAAGGTTCTCTTCCTTCACTATGAGGGACCAGGGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGAGGGTTCTGAAGGCCTGCTGCTGCAGGAGGTGACAGACACGTGTGATTTCGACCTTGTCTTACAGTaGCAGTGTTCCTGGAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: MEGSEGLLLQEVTDTCDFDLVLQ*QCSWRG Trigger: TCCTCTCCAGGAACACTGTCACTGTAAGACAAGGTC...GAAATCACACGTGTCTGTCACCTCCTGCAGCAGCAGGCCTTCAGAACCCTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAGTTCCCTGGTCCCTCATAGTGAAGGAAGAGAACCTTGCTCTGAGCTGTGCAAACAAGGTTACAAGGTaGCTCAGCAGGCCTGAGGCG | + |
|
Preference number: 2 (lower is better) Translates to: QVPWSLIVKEENLALSCANKVTR*LSRPEA Trigger: CGCCTCAGGCCTGCTGAGTCACCTTGTAACCTTGTT...TGCACAGCTCAGAGCAAGGTTCTCTTCCTTCACTATGAGGGACCAGGGAACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTGTGTCGGATGCCGGGAATCAAGACAGACAGGAAGAAGGTGAGGTTTGAGCACTGGGAGCTGGGGTaGTCCTATGCAATTAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: WLCRMPGIKTDRKKVRFEHWELG*SYAIRH Trigger: GTGTCTAATTGCATAGGAGCACCCCAGCTCCCAGTG...CTCAAACCTCACCTTCTTCCTGTCTGTCTTGATTCCCGGCATCCGACACAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTGTGTCGGATGCCGGGAATCAAGACAGACAGGAAGAAGGTGAGGTTTGAGAGTGGAGCTAGTCGATaGAGGGCTGAGAAGGGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: WLCRMPGIKTDRKKVRFESGASR*RAEKGE Trigger: TTCTCCCTTCTCAGCCCTGCATCGACTAGCTCCACT...CTCAAACCTCACCTTCTTCCTGTCTGTCTTGATTCCCGGCATCCGACACAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR CAA 90 bp | GGCCAGGCTGCCTCTCCTCAGGTTAAATCAGGTAACTCAGTGAGATaGTCAAGAGACTCAGCCCTTGGGCATCACCTTTGTGGTCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: GQAASPQVKSGNSVR*SRDSALGHHLCGLL Trigger: AAGGAGACCACAAAGGTGATGCCCAAGGGCTGAGTCTCTTGACAATCTCACTGAGTTACCTGATTTAACCTGAGGAGAGGCAGCCTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR-3UTR TCA 90 bp | ATACGGGTCAAGGACTATGGCTGCATTGTGAAGTTCTACAACGATGTGCAGGGGTGCTGCTGCAGGAGGTaGCAGACACGTGTGATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: IRVKDYGCIVKFYNDVQGCCCRR*QTRVIS Trigger: GGAAATCACACGTGTCTGTCACCTCCTGCAGCAGCA...CCCCTGCACATCGTTGTAGAACTTCACAATGCAGCCATAGTCCTTGACCCGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGACGCACGGTGTTATCATACGGGTCAAGGACTATGGCTGCATTGTGAAGTTCAGAAAACAGGAGCTGTaGGCATCGGGCAGGTACCTG | + |
|
Preference number: 2 (lower is better) Translates to: QTHGVIIRVKDYGCIVKFRKQEL*ASGRYL Trigger: CAGGTACCTGCCCGATGCGCACAGCTCCTGTTTTCT...GAACTTCACAATGCAGCCATAGTCCTTGACCCGTATGATAACACCGTGCGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCCCTGGTCCCTCATAGTGAAGGAAGAGAACCTTGCTCTGAGCTGTGCACAATCATACATGCACCATaGCGTGTCCATGCCTCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: SSLVPHSEGREPCSELCTIIHAP*RVHASH Trigger: GTGGGAGGCATGGACACGCCATGGTGCATGTATGAT...TGTGCACAGCTCAGAGCAAGGTTCTCTTCCTTCACTATGAGGGACCAGGGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTTGCTGCAGCCCGAGTCAAGTTCCCTGGTCCCTCATAGTGAAGGAAGAGAACACTATGGCTGCATTGTaGAGTTCTACAACGATGTGC | + |
|
Preference number: 2 (lower is better) Translates to: ACCSPSQVPWSLIVKEENTMAAL*SSTTMC Trigger: GCACATCGTTGTAGAACTTCACAATGCAGCCATAGT...GTTCTCTTCCTTCACTATGAGGGACCAGGGAACTTGACTCGGGCTGCAGCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAGTTCCCTGGTCCCTCATAGTGAAGGAAGAGAACCTTGCTCTGAGCTGTGCAAAAGGATCCGGGTGTTaGGAGCAGTCAGAAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: QVPWSLIVKEENLALSCAKGSGC*EQSEEN Trigger: GTTTTCTTCTGACTGCTCTCAACACCCGGATCCTTT...TGCACAGCTCAGAGCAAGGTTCTCTTCCTTCACTATGAGGGACCAGGGAACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR GCA 90 bp | ATACGGGTCAAGGACTATGGCTGCATTGTGAAGTTCTACAACGATGTGCAGGGGCTTCCAAGGAGAGGATaGTCCTGTCCTTCAGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: IRVKDYGCIVKFYNDVQGLPRRG*SCPSDC Trigger: ACAGTCTGAAGGACAGGAGCATCCTCTCCTTGGAAG...CCCCTGCACATCGTTGTAGAACTTCACAATGCAGCCATAGTCCTTGACCCGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCCCTGGTCCCTCATAGTGAAGGAAGAGAACCTTGCTCTGAGCTGTGCACAATGCGTTCCTGGTTCTaGTTGGTCCTGGTACTGATA | + |
|
Preference number: 2 (lower is better) Translates to: SSLVPHSEGREPCSELCTMRSWF*LVLVLI Trigger: TATCAGTACCAGGACCAAGCAGAACCAGGAACGCAT...TGTGCACAGCTCAGAGCAAGGTTCTCTTCCTTCACTATGAGGGACCAGGGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR CCA 90 bp | TATGTATACAAAGGGCCCTGCATAGGACCTGGAGTGATGAGGCAGTGGGCATGCACGGGTCAAGGACTATaGCTGCATTGTGAAGTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: YVYKGPCIGPGVMRQWACTGQGL*LHCEVL Trigger: TAGAACTTCACAATGCAGCCATAGTCCTTGACCCGT...GCATGCCCACTGCCTCATCACTCCAGGTCCTATGCAGGGCCCTTTGTATACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCCCTGGTCCCTCATAGTGAAGGAAGAGAACCTTGCTCTGAGCTGTGCACAGTCAAGGACTATGGCTaGATTGTGAAGTTCTACAAC | + |
|
Preference number: 2 (lower is better) Translates to: SSLVPHSEGREPCSELCTVKDYG*IVKFYN Trigger: GTTGTAGAACTTCACAATGCAGCCATAGTCCTTGAC...TGTGCACAGCTCAGAGCAAGGTTCTCTTCCTTCACTATGAGGGACCAGGGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTTCTATGGGAAATGGCTGTGTCGGATGCCGGGAATCAAGACAGACAGGAATGGGCATCACCTTTGTaGTCTCCTTTAGTGCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: SFLWEMAVSDAGNQDRQEWASPL*SPLVPS Trigger: AGATGGCACTAAAGGAGACCACAAAGGTGATGCCCA...TTCCTGTCTGTCTTGATTCCCGGCATCCGACACAGCCATTTCCCATAGAAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR-3UTR CCA 90 bp | TATGTATACAAAGGGCCCTGCATAGGACCTGGAGTGATGAGGCAGTGGGCATGCCTCATTGTAGAAGGTTaGCTTGAGGGGCTTTTAATA | + |
|
Preference number: 2 (lower is better) Translates to: YVYKGPCIGPGVMRQWACLIVEG*LEGLLI Trigger: TATTAAAAGCCCCTCAAGCCAACCTTCTACAATGAG...GCATGCCCACTGCCTCATCACTCCAGGTCCTATGCAGGGCCCTTTGTATACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CAA 90 bp | CTTAGTGACTGTGAACGCAGGTTTAAAGGAGCAGTACACATAGAGTaGCTTTTAAGAGGAAGAGGAGGGAGCACAAATAAAGTGGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LSDCERRFKGAVHIE*LLRGRGGSTNKVGP Trigger: AGGGCCCACTTTATTTGTGCTCCCTCCTCTTCCTCTTAAAAGCAACTCTATGTGTACTGCTCCTTTAAACCTGCGTTCACAGTCACTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCATGAGAGGTTTCCAACAAATAATTGAATCCCTTGAGAATCTCGTTATAAGACTTTCCCGTAGGTTTTaGTCTGTGACCCTGAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: TMRGFQQIIESLENLVIRLSRRF*SVTLKP Trigger: TGGCTTCAGGGTCACAGAGCAAAACCTACGGGAAAG...TCTTATAACGAGATTCTCAAGGGATTCAATTATTTGTTGGAAACCTCTCATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CAA 90 bp | ATTTCTGTGAACCTTGTGGTCCACAGGATCTTTACAAACTACTGGTaGTTTTATGTCTATGCCCAAGACACTGTAGATAGCAGAAAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: ISVNLVVHRIFTNYW*FYVYAQDTVDSRKV Trigger: GACTTTTCTGCTATCTACAGTGTCTTGGGCATAGACATAAAACAACCAGTAGTTTGTAAAGATCCTGTGGACCACAAGGTTCACAGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCATGAGAGGTTTCCAACAAATAATTGAATCCCTTGAGAATCTCGTTATAAGACTCTGCCTTTGGATCTaGCCTAAGGTCTTGATGGAT | + |
|
Preference number: 2 (lower is better) Translates to: TMRGFQQIIESLENLVIRLCLWI*PKVLMD Trigger: ATCCATCAAGACCTTAGGTCAGATCCAAAGGCAGAG...TCTTATAACGAGATTCTCAAGGGATTCAATTATTTGTTGGAAACCTCTCATGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCATGAGAGGTTTCCAACAAATAATTGAATCCCTTGAGAATCTCGTTATAAGAATAAAGGCCCATAGTTaGACATTGGTGCAGATTTTT | + |
|
Preference number: 2 (lower is better) Translates to: TMRGFQQIIESLENLVIRIKAHS*TLVQIF Trigger: AAAAATCTGCACCAATGTGCAACTATGGGCCTTTAT...TCTTATAACGAGATTCTCAAGGGATTCAATTATTTGTTGGAAACCTCTCATGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR TCA 72 bp | ACAGGAGCTGTGCGCATCGGGCAGGTACCTGGGCAGTaGCCTTGTCTTACAGTGACAGTGTTCCTGGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TGAVRIGQVPGQ*PCLTVTVFLER Trigger: CCTCTCCAGGAACACTGTCACTGTAAGACAAGGTCACTGCCCAGGTACCTGCCCGATGCGCACAGCTCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR GCA 72 bp | AGAGACGGTCTTTTACACTGGCCAGGTAACCCTTCCTaGACAGGCCTCCCGCCCTTAGTGACTGTGAACGCA | + |
|
Preference number: 3 (lower is better) Translates to: RDGLLHWPGNPS*TGLPPLVTVNA Trigger: TGCGTTCACAGTCACTAAGGGCGGGAGGCCTGTGCAGGAAGGGTTACCTGGCCAGTGTAAAAGACCGTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR GCA 72 bp | CTCTCATCACCTGCTATGAGGGTGCCAAGCCTGGCCTaGAGACGCACGGTGTTATCATACGGGTCAAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: LSSPAMRVPSLA*RRTVLSYGSRT Trigger: AGTCCTTGACCCGTATGATAACACCGTGCGTCTGCAGGCCAGGCTTGGCACCCTCATAGCAGGTGATGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR TCA 72 bp | CTTCCAAGGAGAGGATGCTCCTGTCCTTCAGACTGTTaGGTGACTCGCGGCCAAAGGATCCGGGTGTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPRRGCSCPSDC*VTRGQRIRVLR Trigger: TCTCAACACCCGGATCCTTTGGCCGCGAGTCACTCAACAGTCTGAAGGACAGGAGCATCCTCTCCTTGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR GCA 72 bp | ACACTGGGAAGTAGCTCAGTGGGTAAAGGTGCTTGCTaGAGCCCGAGTCAAGTTCCCTGGTCCCTCATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TLGSSSVGKGAC*SPSQVPWSLIV Trigger: CACTATGAGGGACCAGGGAACTTGACTCGGGCTGCAGCAAGCACCTTTACCCACTGAGCTACTTCCCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR GCA 72 bp | CAGACACTGGGAAGTAGCTCAGTGGGTAAAGGTGCTTaGTGCAGCCCGAGTCAAGTTCCCTGGTCCCTCATA | + |
|
Preference number: 3 (lower is better) Translates to: QTLGSSSVGKGA*CSPSQVPWSLI Trigger: TATGAGGGACCAGGGAACTTGACTCGGGCTGCAGCAAGCACCTTTACCCACTGAGCTACTTCCCAGTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CCA 72 bp | AGGACCTGGAGTGATGAGGCAGTGGGCATGCGTTCCTaGTTCTGCTTGGTCCTGGTACTGATAGTTGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RTWSDEAVGMRS*FCLVLVLIVGF Trigger: GAAGCCAACTATCAGTACCAGGACCAAGCAGAACCAGGAACGCATGCCCACTGCCTCATCACTCCAGGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR TCA 72 bp | CATCTCTTCTCTGCCTTTGGATCTGACCTAAGGTCTTaGTGGATCTCCCGGGTCCCTGCAGAGCTCATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: HLFSAFGSDLRS*WISRVPAELME Trigger: CTCCATGAGCTCTGCAGGGACCCGGGAGATCCATCAAGACCTTAGGTCAGATCCAAAGGCAGAGAAGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CCA 72 bp | ATTGTCAAGAGACTCAGCCCTTGGGCATCACCTTTGTaGTCTCCTTTAGTGCCATCTCCCCTCACGTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: IVKRLSPWASPL*SPLVPSPLTLG Trigger: GCCCAACGTGAGGGGAGATGGCACTAAAGGAGACCACAAAGGTGATGCCCAAGGGCTGAGTCTCTTGACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR CCA 72 bp | GTGATGCTATGTATACAAAGGGCCCTGCATAGGACCTaGAGTGATGAGGCAGTGGGCATGCGTTCCTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: VMLCIQRALHRT*SDEAVGMRSWF Trigger: GAACCAGGAACGCATGCCCACTGCCTCATCACTCCAGGTCCTATGCAGGGCCCTTTGTATACATAGCATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CCA 72 bp | GGTAAAGGTGCTTGCTGCAGCCCGAGTCAAGTTCCCTaGTCCCTCATAGTGAAGGAAGAGAACCTTGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GKGACCSPSQVP*SLIVKEENLAL Trigger: CAGAGCAAGGTTCTCTTCCTTCACTATGAGGGACCAGGGAACTTGACTCGGGCTGCAGCAAGCACCTTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTGCTGCAGCCCGAGTCAAGTTCCCTGGTCCCTCATAGTGAAGGAAGAGAACACCTGGGCAGTGACCTaGTCTTACAGTGACAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ACCSPSQVPWSLIVKEENTWAVT*SYSDSV Trigger: AACACTGTCACTGTAAGACAAGGTCACTGCCCAGGT...GTTCTCTTCCTTCACTATGAGGGACCAGGGAACTTGACTCGGGCTGCAGCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR GCA 72 bp | CTTGCTCTGAGCTGTGCACACATACATCATGCCACCTaGATACCTCCCCCACCCCAATCATACATGCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: LALSCAHIHHAT*IPPPPQSYMHH Trigger: ATGGTGCATGTATGATTGGGGTGGGGGAGGTATGCAGGTGGCATGATGTATGTGTGCACAGCTCAGAGCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR GCA 72 bp | CCTCATAGTGAAGGAAGAGAACCTTGCTCTGAGCTGTaGACACATACATCATGCCACCTGCATACCTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: PHSEGREPCSEL*THTSCHLHTSP Trigger: GGGGGAGGTATGCAGGTGGCATGATGTATGTGTGCACAGCTCAGAGCAAGGTTCTCTTCCTTCACTATGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTGTGTCGGATGCCGGGAATCAAGACAGACAGGAAGAAGGTGAGGTTTGAGGGTAACTCAGTGAGATaGTCAAGAGACTCAGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: WLCRMPGIKTDRKKVRFEGNSVR*SRDSAL Trigger: AAGGGCTGAGTCTCTTGACAATCTCACTGAGTTACC...CTCAAACCTCACCTTCTTCCTGTCTGTCTTGATTCCCGGCATCCGACACAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR TCA 72 bp | AGGCTGCCTCTCCTCAGGTTAAATCAGGTAACTCAGTaGGATTGTCAAGAGACTCAGCCCTTGGGCATCACC | + |
|
Preference number: 3 (lower is better) Translates to: RLPLLRLNQVTQ*DCQETQPLGIT Trigger: GGTGATGCCCAAGGGCTGAGTCTCTTGACAATCTCACTGAGTTACCTGATTTAACCTGAGGAGAGGCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR GCA 72 bp | AGAGAACCTTGCTCTGAGCTGTGCACACATACATCATaGCACCTGCATACCTCCCCCACCCCAATCATACAT | + |
|
Preference number: 3 (lower is better) Translates to: REPCSELCTHTS*HLHTSPTPIIH Trigger: ATGTATGATTGGGGTGGGGGAGGTATGCAGGTGGCATGATGTATGTGTGCACAGCTCAGAGCAAGGTTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CCA 72 bp | GTGATAGATAACCCAGAAGTACTCACTGGAATCCAGTaGATGGAGGCCCACACCAGAGAAGTAGTGCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: VIDNPEVLTGIQ*MEAHTREVVLV Trigger: GACCAGCACTACTTCTCTGGTGTGGGCCTCCATCCACTGGATTCCAGTGAGTACTTCTGGGTTATCTATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CCA 72 bp | GCAGACGCACGGTGTTATCATACGGGTCAAGGACTATaGCTGCATTGTGAAGTTCTACAACGATGTGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ADARCYHTGQGL*LHCEVLQRCAG Trigger: CCCTGCACATCGTTGTAGAACTTCACAATGCAGCCATAGTCCTTGACCCGTATGATAACACCGTGCGTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCCCTGGTCCCTCATAGTGAAGGAAGAGAACCTTGCTCTGAGCTGTGCACACAAAGGATCCGGGTGTaGAGAGCAGTCAGAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSLVPHSEGREPCSELCTQRIRV*RAVRRK Trigger: TTTTCTTCTGACTGCTCTCAACACCCGGATCCTTTG...TGTGCACAGCTCAGAGCAAGGTTCTCTTCCTTCACTATGAGGGACCAGGGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR TCA 72 bp | TACCCCCTCCCTACCCTCACCCCACCTCAATTTCTGTaGACCTTGTGGTCCACAGGATCTTTACAAACTACT | + |
|
Preference number: 3 (lower is better) Translates to: YPLPTLTPPQFL*TLWSTGSLQTT Trigger: AGTAGTTTGTAAAGATCCTGTGGACCACAAGGTTCACAGAAATTGAGGTGGGGTGAGGGTAGGGAGGGGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR TCA 72 bp | GCAGCTGCAATTATTAGAGATAAAAGGTCTTTGGAGTaGCCTATGGCCTTCGGGTTCCTGAGGTGGCACACC | + |
|
Preference number: 3 (lower is better) Translates to: AAAIIRDKRSLE*PMAFGFLRWHT Trigger: GGTGTGCCACCTCAGGAACCCGAAGGCCATAGGTCACTCCAAAGACCTTTTATCTCTAATAATTGCAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR GCA 72 bp | ACGCACGGTGTTATCATACGGGTCAAGGACTATGGCTaGATTGTGAAGTTCTACAACGATGTGCAGGGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: THGVIIRVKDYG*IVKFYNDVQGL Trigger: TAGCCCCTGCACATCGTTGTAGAACTTCACAATGCAGCCATAGTCCTTGACCCGTATGATAACACCGTGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CCA 72 bp | TTTAAAAAGTGTCCCAGACACTGGGAAGTAGCTCAGTaGGTAAAGGTGCTTGCTGCAGCCCGAGTCAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FKKCPRHWEVAQ*VKVLAAARVKF Trigger: GAACTTGACTCGGGCTGCAGCAAGCACCTTTACCCACTGAGCTACTTCCCAGTGTCTGGGACACTTTTTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR TCA 72 bp | CTGAGGTGGCACACCAGTGGCTGTCTTGCTAACAGATaGCTTGTTGATAGCCTTTGTCTTTCCCGTAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LRWHTSGCLANR*LVDSLCLSRRF Trigger: AAACCTACGGGAAAGACAAAGGCTATCAACAAGTCATCTGTTAGCAAGACAGCCACTGGTGTGCCACCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CCA 72 bp | GCGTTCCTGGTTCTGCTTGGTCCTGGTACTGATAGTTaGCTTCAGTGCCTCCTGTGTGCTAAATATGATGTT | + |
|
Preference number: 3 (lower is better) Translates to: AFLVLLGPGTDS*LQCLLCAKYDV Trigger: AACATCATATTTAGCACACAGGAGGCACTGAAGCCAACTATCAGTACCAGGACCAAGCAGAACCAGGAACGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CCA 72 bp | CTGCACAAAGTGTACTATACAATGAAGGCTTCCCAGTaGGTTGTCAACAGGCTTCACCAGCTGATGATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LHKVYYTMKASQ*VVNRLHQLMIL Trigger: GAGAATCATCAGCTGGTGAAGCCTGTTGACAACCCACTGGGAAGCCTTCATTGTATAGTACACTTTGTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR GCA 72 bp | GTTCTGCTTGGTCCTGGTACTGATAGTTGGCTTCAGTaGCTCCTGTGTGCTAAATATGATGTTTCATTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VLLGPGTDSWLQ*LLCAKYDVSFK Trigger: TTTAAATGAAACATCATATTTAGCACACAGGAGGCACTGAAGCCAACTATCAGTACCAGGACCAAGCAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCATGAGAGGTTTCCAACAAATAATTGAATCCCTTGAGAATCTCGTTATAAGAGCAGTACACATAGAGTaGCTTTTAAGAGGAAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TMRGFQQIIESLENLVIRAVHIE*LLRGRG Trigger: TCCTCTTCCTCTTAAAAGCAACTCTATGTGTACTGC...TCTTATAACGAGATTCTCAAGGGATTCAATTATTTGTTGGAAACCTCTCATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCATGAGAGGTTTCCAACAAATAATTGAATCCCTTGAGAATCTCGTTATAAGAGCTGGTCTAGTGAGGTaGTGTTTGTTTCTCTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TMRGFQQIIESLENLVIRAGLVR*CLFLLK Trigger: TTTTAAGAGAAACAAACACAACCTCACTAGACCAGC...TCTTATAACGAGATTCTCAAGGGATTCAATTATTTGTTGGAAACCTCTCATGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR CCA 90 bp | GCACATCCCGGACCCAGAGACGGTCTTTTACACTGGCCAGGTAACCCTTCCTGCGGAAGCTCGATAGGTTaGCGGGGCCCTCTCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHPGPRDGLLHWPGNPSCGSSIG*RGPLHK Trigger: CTTGTGGAGAGGGCCCCGCCAACCTATCGAGCTTCC...GCAGGAAGGGTTACCTGGCCAGTGTAAAAGACCGTCTCTGGGTCCGGGATGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCCCTGGTCCCTCATAGTGAAGGAAGAGAACCTTGCTCTGAGCTGTGCACACCTGACTGCCCACCGTaGCCAGGGCCACCAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPHSEGREPCSELCTPDCPP*PGPPAH Trigger: ATGGGCTGGTGGCCCTGGGCACGGTGGGCAGTCAGG...TGTGCACAGCTCAGAGCAAGGTTCTCTTCCTTCACTATGAGGGACCAGGGAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTGTGTCGGATGCCGGGAATCAAGACAGACAGGAAGAAGGTGAGGTTTGAGACTGAGAACAGCTCCTaGCTGCCCACCGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLCRMPGIKTDRKKVRFETENSS*LPTVPR Trigger: CCTGGGCACGGTGGGCAGTCAGGAGCTGTTCTCAGT...CTCAAACCTCACCTTCTTCCTGTCTGTCTTGATTCCCGGCATCCGACACAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTTGGAGTGACCTATGGCCTTCGGGTTCCTGAGGTGGCACACCAGTGGCTGCCTCCTGACGGTAGCTaGGTGGCGAGCAGTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VFGVTYGLRVPEVAHQWLPPDGS*VASSNV Trigger: AACATTACTGCTCGCCACTCAGCTACCGTCAGGAGG...CAGCCACTGGTGTGCCACCTCAGGAACCCGAAGGCCATAGGTCACTCCAAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR GCA 90 bp | CATCGGGCAGGTACCTGGGCAGTGACCTTGTCTTACAGTGACAGTGTTCCTGGAGTGGCCGTGGCTGTGTaGCTTCCACTGGGAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRAGTWAVTLSYSDSVPGVAVAV*LPLGTW Trigger: CCAAGTTCCCAGTGGAAGGCACACAGCCACGGCCAC...TCCAGGAACACTGTCACTGTAAGACAAGGTCACTGCCCAGGTACCTGCCCGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCCCTGGTCCCTCATAGTGAAGGAAGAGAACCTTGCTCTGAGCTGTGCACAACTGAGAACAGCTCCTaGCTGCCCACCGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPHSEGREPCSELCTTENSS*LPTVPR Trigger: CCTGGGCACGGTGGGCAGTCAGGAGCTGTTCTCAGT...TGTGCACAGCTCAGAGCAAGGTTCTCTTCCTTCACTATGAGGGACCAGGGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR TCA 90 bp | ATACGGGTCAAGGACTATGGCTGCATTGTGAAGTTCTACAACGATGTGCAGGGGGTAGTTCCGGGCGGGTaGGCAGGGACAGTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IRVKDYGCIVKFYNDVQGVVPGG*AGTVEG Trigger: GCCTTCCACTGTCCCTGCTCACCCGCCCGGAACTAC...CCCCTGCACATCGTTGTAGAACTTCACAATGCAGCCATAGTCCTTGACCCGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCCTCAGGTTAAATCAGGTAACTCAGTGAGATTGTCAAGAGACTCAGCCCCTGACTGCCCACCGTaGCCAGGGCCACCAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASPQVKSGNSVRLSRDSAPDCPP*PGPPAH Trigger: ATGGGCTGGTGGCCCTGGGCACGGTGGGCAGTCAGG...GGCTGAGTCTCTTGACAATCTCACTGAGTTACCTGATTTAACCTGAGGAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR CAA 72 bp | AGCTGTGCGCATCGGGCAGGTACCTGGGCAGTGACCTaGTCTTACAGTGACAGTGTTCCTGGAGAGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SCAHRAGTWAVT*SYSDSVPGEEL Trigger: CAGTTCCTCTCCAGGAACACTGTCACTGTAAGACAAGGTCACTGCCCAGGTACCTGCCCGATGCGCACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR CCA 90 bp | GTGAAGTTCTACAACGATGTGCAGGGGCTAGTGCCTAAGCATGAGCTTAGCACCGTTCCACTGTGGCCGTaGCTGTGTGCCTTCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VKFYNDVQGLVPKHELSTVPLWP*LCAFHW Trigger: CCAGTGGAAGGCACACAGCCACGGCCACAGTGGAAC...GGTGCTAAGCTCATGCTTAGGCACTAGCCCCTGCACATCGTTGTAGAACTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTTCTATGGGAAATGGCTGTGTCGGATGCCGGGAATCAAGACAGACAGGAACCGCGGAGCAGTTCTTaGCCCTCCGGTACTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SFLWEMAVSDAGNQDRQEPRSSS*PSGTGT Trigger: AGTGCCAGTACCGGAGGGCCAAGAACTGCTCCGCGG...TTCCTGTCTGTCTTGATTCCCGGCATCCGACACAGCCATTTCCCATAGAAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CCA 90 bp | CAGACGCACGGTGTTATCATACGGGTCAAGGACTATGGCTGCATTGTGAAGTTCCTCCGTAGCATGGGCTaGGGGGAAGCCTTTATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QTHGVIIRVKDYGCIVKFLRSMG*GEAFIP Trigger: GGGGATAAAGGCTTCCCCCCAGCCCATGCTACGGAG...GAACTTCACAATGCAGCCATAGTCCTTGACCCGTATGATAACACCGTGCGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR CCA 90 bp | AACCCAGAAGTACTCACTGGAATCCAGTGGATGGAGGCCCACACCAGAGAAGTACTGTGTGCCTTCCACTaGGAACTTGGCGACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NPEVLTGIQWMEAHTREVLCAFH*ELGDQL Trigger: GAGCTGGTCGCCAAGTTCCCAGTGGAAGGCACACAG...TACTTCTCTGGTGTGGGCCTCCATCCACTGGATTCCAGTGAGTACTTCTGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR CCA 90 bp | AACCCAGAAGTACTCACTGGAATCCAGTGGATGGAGGCCCACACCAGAGAAGTAAATCCTGTCAGACCCTaGGCCCACTTGTGTAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NPEVLTGIQWMEAHTREVNPVRP*AHLCRR Trigger: CCGCCTACACAAGTGGGCCCAGGGTCTGACAGGATT...TACTTCTCTGGTGTGGGCCTCCATCCACTGGATTCCAGTGAGTACTTCTGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCCTCAGGTTAAATCAGGTAACTCAGTGAGATTGTCAAGAGACTCAGCCGTGGAAGGCCACCACTaGGAACAGCTCCTGACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASPQVKSGNSVRLSRDSAVEGHH*EQLLTA Trigger: GGCAGTCAGGAGCTGTTCTCAGTGGTGGCCTTCCAC...GGCTGAGTCTCTTGACAATCTCACTGAGTTACCTGATTTAACCTGAGGAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CCA 90 bp | GTGTACTATACAATGAAGGCTTCCCAGTGGGTTGTCAACAGGCTTCACCAGCTGGGTGAGCAGGGACAGTaGAAGGCCACCACTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VYYTMKASQWVVNRLHQLGEQGQ*KATTEN Trigger: GTTCTCAGTGGTGGCCTTCCACTGTCCCTGCTCACC...CAGCTGGTGAAGCCTGTTGACAACCCACTGGGAAGCCTTCATTGTATAGTACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CCA 90 bp | CAGACGCACGGTGTTATCATACGGGTCAAGGACTATGGCTGCATTGTGAAGTTCGGTGAGCAGGGACAGTaGAAGGCCACCACTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QTHGVIIRVKDYGCIVKFGEQGQ*KATTEN Trigger: GTTCTCAGTGGTGGCCTTCCACTGTCCCTGCTCACC...GAACTTCACAATGCAGCCATAGTCCTTGACCCGTATGATAACACCGTGCGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR CCA 90 bp | CTGCACAAAGTGTACTATACAATGAAGGCTTCCCAGTGGGTTGTCAACAGGCTTGACAGACCAGGTGACTaGAGCCACAGCTGCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHKVYYTMKASQWVVNRLDRPGD*SHSCTA Trigger: GGCCGTGCAGCTGTGGCTCCAGTCACCTGGTCTGTC...AAGCCTGTTGACAACCCACTGGGAAGCCTTCATTGTATAGTACACTTTGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTATGGGAAATGGCTGTGTCGGATGCCGGGAATCAAGACAGACAGGAAGAACTCCGTAGCATGGGCTaGGGGGAAGCCTTTATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLWEMAVSDAGNQDRQEELRSMG*GEAFIP Trigger: GGGGATAAAGGCTTCCCCCCAGCCCATGCTACGGAG...TTCTTCCTGTCTGTCTTGATTCCCGGCATCCGACACAGCCATTTCCCATAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTTCTATGGGAAATGGCTGTGTCGGATGCCGGGAATCAAGACAGACAGGAAGGAAGCTCGATAGGTTaGCGGGGCCCTCTCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFLWEMAVSDAGNQDRQEGSSIG*RGPLHK Trigger: CTTGTGGAGAGGGCCCCGCCAACCTATCGAGCTTCC...TTCCTGTCTGTCTTGATTCCCGGCATCCGACACAGCCATTTCCCATAGAAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CCA 90 bp | AGTTCCCTGGTCCCTCATAGTGAAGGAAGAGAACCTTGCTCTGAGCTGTGCACAGTGCGCTGGAACAACTaGTCCTCGTTGGTACGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLVPHSEGREPCSELCTVRWNN*SSLVRY Trigger: GTACCGTACCAACGAGGACCAGTTGTTCCAGCGCAC...TGTGCACAGCTCAGAGCAAGGTTCTCTTCCTTCACTATGAGGGACCAGGGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CAA 72 bp | GAGATTGTCAAGAGACTCAGCCCTTGGGCATCACCTTaGTGGTCTCCTTTAGTGCCATCTCCCCTCACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EIVKRLSPWASP*WSPLVPSPLTL Trigger: CAACGTGAGGGGAGATGGCACTAAAGGAGACCACAAAGGTGATGCCCAAGGGCTGAGTCTCTTGACAATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR TCA 90 bp | ATGGAGGGTTCTGAAGGCCTGCTGCTGCAGGAGGTGACAGACACGTGTGATTTCTCACATCCTTGCTCTTaGAGAAGAGAGACAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: MEGSEGLLLQEVTDTCDFSHPCS*RRETGS Trigger: GCTTCCTGTCTCTCTTCTTCAAGAGCAAGGATGTGA...GAAATCACACGTGTCTGTCACCTCCTGCAGCAGCAGGCCTTCAGAACCCTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR TCA 90 bp | TTAACTGCACAAAGTGTACTATACAATGAAGGCTTCCCAGTGGGTTGTCAACAGGTAGTTCCGGGCGGGTaGGCAGGGACAGTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTAQSVLYNEGFPVGCQQVVPGG*AGTVEG Trigger: GCCTTCCACTGTCCCTGCTCACCCGCCCGGAACTAC...CTGTTGACAACCCACTGGGAAGCCTTCATTGTATAGTACACTTTGTGCAGTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR TCA 90 bp | AACCCAGAAGTACTCACTGGAATCCAGTGGATGGAGGCCCACACCAGAGAAGTAGGTCCACAAACTCACTaGGAGCACAGACATAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NPEVLTGIQWMEAHTREVGPQTH*EHRHRP Trigger: AGGCCTATGTCTGTGCTCTCAGTGAGTTTGTGGACC...TACTTCTCTGGTGTGGGCCTCCATCCACTGGATTCCAGTGAGTACTTCTGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCTTCCCAGTGGGTTGTCAACAGGCTTCACCAGCTGATGATTCTCAACTCTCCTCCTGACGGTAGCTaGGTGGCGAGCAGTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KASQWVVNRLHQLMILNSPPDGS*VASSNV Trigger: AACATTACTGCTCGCCACTCAGCTACCGTCAGGAGG...AGAGTTGAGAATCATCAGCTGGTGAAGCCTGTTGACAACCCACTGGGAAGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR TCA 90 bp | CATCGGGCAGGTACCTGGGCAGTGACCTTGTCTTACAGTGACAGTGTTCCTGGACTTCGTCATCCTTGTTaGGAGCCACAAAGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRAGTWAVTLSYSDSVPGLRHPC*EPQSQR Trigger: TCTTTGGCTTTGTGGCTCTCAACAAGGATGACGAAG...TCCAGGAACACTGTCACTGTAAGACAAGGTCACTGCCCAGGTACCTGCCCGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR GCA 90 bp | CTGCACAAAGTGTACTATACAATGAAGGCTTCCCAGTGGGTTGTCAACAGGCTTGTGGCCGTGGCTGTGTaGCTTCCACTGGGAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHKVYYTMKASQWVVNRLVAVAV*LPLGTW Trigger: CCAAGTTCCCAGTGGAAGGCACACAGCCACGGCCAC...AAGCCTGTTGACAACCCACTGGGAAGCCTTCATTGTATAGTACACTTTGTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTCTTTAAGTTTTCTATGGGAAATGGCTGTGTCGGATGCCGGGAATCAAGAGTTCCACTGTGGCCGTaGCTGTGTGCCTTCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLFKFSMGNGCVGCRESRVPLWP*LCAFHW Trigger: CCAGTGGAAGGCACACAGCCACGGCCACAGTGGAAC...TCTTGATTCCCGGCATCCGACACAGCCATTTCCCATAGAAAACTTAAAGAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR TCA 90 bp | ATACGGGTCAAGGACTATGGCTGCATTGTGAAGTTCTACAACGATGTGCAGGGGGCGAGCAGTAATGTTTaGGGCACTTGGTCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: IRVKDYGCIVKFYNDVQGASSNV*GTWSGT Trigger: TGTTCCTGACCAAGTGCCTCAAACATTACTGCTCGC...CCCCTGCACATCGTTGTAGAACTTCACAATGCAGCCATAGTCCTTGACCCGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR CCA 90 bp | CAGACGCACGGTGTTATCATACGGGTCAAGGACTATGGCTGCATTGTGAAGTTCCTGACGGTAGCTGAGTaGCGAGCAGTAATGTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTHGVIIRVKDYGCIVKFLTVAE*RAVMFE Trigger: CTCAAACATTACTGCTCGCCACTCAGCTACCGTCAG...GAACTTCACAATGCAGCCATAGTCCTTGACCCGTATGATAACACCGTGCGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR CCA 90 bp | CTGCACAAAGTGTACTATACAATGAAGGCTTCCCAGTGGGTTGTCAACAGGCTTGTGCGCTGGAACAACTaGTCCTCGTTGGTACGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LHKVYYTMKASQWVVNRLVRWNN*SSLVRY Trigger: GTACCGTACCAACGAGGACCAGTTGTTCCAGCGCAC...AAGCCTGTTGACAACCCACTGGGAAGCCTTCATTGTATAGTACACTTTGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR TCA 90 bp | CCCACCTCAATTTCTGTGAACCTTGTGGTCCACAGGATCTTTACAAACTACTGGGGTCCACAAACTCACTaGGAGCACAGACATAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTSISVNLVVHRIFTNYWGPQTH*EHRHRP Trigger: AGGCCTATGTCTGTGCTCTCAGTGAGTTTGTGGACC...CCAGTAGTTTGTAAAGATCCTGTGGACCACAAGGTTCACAGAAATTGAGGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTTCTATGGGAAATGGCTGTGTCGGATGCCGGGAATCAAGACAGACAGGAAGCGAGCAGTAATGTTTaGGGCACTTGGTCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SFLWEMAVSDAGNQDRQEASSNV*GTWSGT Trigger: TGTTCCTGACCAAGTGCCTCAAACATTACTGCTCGC...TTCCTGTCTGTCTTGATTCCCGGCATCCGACACAGCCATTTCCCATAGAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTTCTATGGGAAATGGCTGTGTCGGATGCCGGGAATCAAGACAGACAGGAACTGACGGTAGCTGAGTaGCGAGCAGTAATGTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFLWEMAVSDAGNQDRQELTVAE*RAVMFE Trigger: CTCAAACATTACTGCTCGCCACTCAGCTACCGTCAG...TTCCTGTCTGTCTTGATTCCCGGCATCCGACACAGCCATTTCCCATAGAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CCA 90 bp | TTAACTGCACAAAGTGTACTATACAATGAAGGCTTCCCAGTGGGTTGTCAACAGCTGTGTGCCTTCCACTaGGAACTTGGCGACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTAQSVLYNEGFPVGCQQLCAFH*ELGDQL Trigger: GAGCTGGTCGCCAAGTTCCCAGTGGAAGGCACACAG...CTGTTGACAACCCACTGGGAAGCCTTCATTGTATAGTACACTTTGTGCAGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CCA 90 bp | TTAACTGCACAAAGTGTACTATACAATGAAGGCTTCCCAGTGGGTTGTCAACAGTTACCTGTCAGACCCTaGGCCCACTTGTGTAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LTAQSVLYNEGFPVGCQQLPVRP*AHLCRR Trigger: CCGCCTACACAAGTGGGCCCAGGGTCTGACAGGTAA...CTGTTGACAACCCACTGGGAAGCCTTCATTGTATAGTACACTTTGTGCAGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR CAA 72 bp | GCCTCTCCTCAGGTTAAATCAGGTAACTCAGTGAGATaGTCAAGAGACTCAGCCCTTGGGCATCACCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASPQVKSGNSVR*SRDSALGHHLC Trigger: ACAAAGGTGATGCCCAAGGGCTGAGTCTCTTGACAATCTCACTGAGTTACCTGATTTAACCTGAGGAGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR CAA 72 bp | GGTGGCACACCAGTGGCTGTCTTGCTAACAGATGACTaGTTGATAGCCTTTGTCTTTCCCGTAGGTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGTPVAVLLTDD*LIAFVFPVGFA Trigger: AGCAAAACCTACGGGAAAGACAAAGGCTATCAACAAGTCATCTGTTAGCAAGACAGCCACTGGTGTGCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTATGGGAAATGGCTGTGTCGGATGCCGGGAATCAAGACAGACAGGAAGAACTTCGTCATCCTTGTTaGGAGCCACAAAGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLWEMAVSDAGNQDRQEELRHPC*EPQSQR Trigger: TCTTTGGCTTTGTGGCTCTCAACAAGGATGACGAAG...TTCTTCCTGTCTGTCTTGATTCCCGGCATCCGACACAGCCATTTCCCATAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR GCA 90 bp | TTAACTGCACAAAGTGTACTATACAATGAAGGCTTCCCAGTGGGTTGTCAACAGCATTGTCAGGGGCTGTaGCATTACCTGTCAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTAQSVLYNEGFPVGCQQHCQGL*HYLSDP Trigger: AGGGTCTGACAGGTAATGGCACAGCCCCTGACAATG...CTGTTGACAACCCACTGGGAAGCCTTCATTGTATAGTACACTTTGTGCAGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CCA 90 bp | ACCATGAGAGGTTTCCAACAAATAATTGAATCCCTTGAGAATCTCGTTATAAGACCGCGGAGCAGTTCTTaGCCCTCCGGTACTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TMRGFQQIIESLENLVIRPRSSS*PSGTGT Trigger: AGTGCCAGTACCGGAGGGCCAAGAACTGCTCCGCGG...TCTTATAACGAGATTCTCAAGGGATTCAATTATTTGTTGGAAACCTCTCATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTCTTTAAGTTTTCTATGGGAAATGGCTGTGTCGGATGCCGGGAATCAAGATCACATCCTTGCTCTTaGAGAAGAGAGACAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLFKFSMGNGCVGCRESRSHPCS*RRETGS Trigger: GCTTCCTGTCTCTCTTCTTCAAGAGCAAGGATGTGA...TCTTGATTCCCGGCATCCGACACAGCCATTTCCCATAGAAAACTTAAAGAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR CAA 72 bp | AACCTTGTGGTCCACAGGATCTTTACAAACTACTGGTaGTTTTATGTCTATGCCCAAGACACTGTAGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLVVHRIFTNYW*FYVYAQDTVDS Trigger: GCTATCTACAGTGTCTTGGGCATAGACATAAAACAACCAGTAGTTTGTAAAGATCCTGTGGACCACAAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| 3UTR CAA 72 bp | GGCCCACACCAGAGAAGTAGTGCTGGTCTAGTGAGGTaGTGTTTGTTTCTCTTAAAAAGCTTCTTAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: GPHQRSSAGLVR*CLFLLKSFLKL Trigger: AAGTTTTAAGAAGCTTTTTAAGAGAAACAAACACAACCTCACTAGACCAGCACTACTTCTCTGGTGTGGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| 3UTR CAA 72 bp | TGTGAACGCAGGTTTAAAGGAGCAGTACACATAGAGTaGCTTTTAAGAGGAAGAGGAGGGAGCACAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: CERRFKGAVHIE*LLRGRGGSTNK Trigger: TTTATTTGTGCTCCCTCCTCTTCCTCTTAAAAGCAACTCTATGTGTACTGCTCCTTTAAACCTGCGTTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS CCA 90 bp | GAGCCACAGCTGCACGGCCCAGGATTGAGCTTAGGAGGAGGAAGTTaGGGGCCGCGGAGCAGTTCTTGGCCCTCCGGTACTGGCACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: EPQLHGPGLSLGGGS*GPRSSSWPSGTGTR Trigger: CCGAGTGCCAGTACCGGAGGGCCAAGAACTGCTCCGCGGCCCCCAACTTCCTCCTCCTAAGCTCAATCCTGGGCCGTGCAGCTGTGGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS GCA 90 bp | GAAACGGCGCACGTTGTTGGCGGCCAGCACCCTCGAATGCACCTCTaGTGTGCGCTGGAACAACTGGTCCTCGTTGGTACGGTACTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ETAHVVGGQHPRMHL*CALEQLVLVGTVLS Trigger: GCTCAGTACCGTACCAACGAGGACCAGTTGTTCCAGCGCACAGCAGAGGTGCATTCGAGGGTGCTGGCCGCCAACAACGTGCGCCGTTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS GCA 90 bp | AAGCCAAAGAAACGGCGCACGTTGTTGGCGGCCAGCACCCTCGAATaGACCTCTGCTGTGCGCTGGAACAACTGGTCCTCGTTGGTACGG | + |
|
Preference number: 5 (lower is better) Translates to: KPKKRRTLLAASTLE*TSAVRWNNWSSLVR Trigger: CCGTACCAACGAGGACCAGTTGTTCCAGCGCACAGCAGAGGTGCATTCGAGGGTGCTGGCCGCCAACAACGTGCGCCGTTTCTTTGGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CCA 90 bp | AGGAGGAAGTTGGGGGCCGCGGAGCAGTTCTTGGCCCTCCGGTACTaGCACTCGGCGACTAGGTTCCAAGTGTGGTTGTTGAGAATGACT | + |
|
Preference number: 5 (lower is better) Translates to: RRKLGAAEQFLALRY*HSATRFQVWLLRMT Trigger: AGTCATTCTCAACAACCACACTTGGAACCTAGTCGCCGAGTGCCAGTACCGGAGGGCCAAGAACTGCTCCGCGGCCCCCAACTTCCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CCA 90 bp | CCCAGTGATAGCGTTCCACTGTGGCCGTGGCTGTGTGCCTTCCACTaGGAACTTGGCGACCAGCTCTTCGTCATCCTTGTTGAGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSDSVPLWPWLCAFH*ELGDQLFVILVESH Trigger: GTGGCTCTCAACAAGGATGACGAAGAGCTGGTCGCCAAGTTCCCAGTGGAAGGCACACAGCCACGGCCACAGTGGAACGCTATCACTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CCA 90 bp | CTCTCGGTACAGATAGACCCCAGTGATAGCGTTCCACTGTGGCCGTaGCTGTGTGCCTTCCACTGGGAACTTGGCGACCAGCTCTTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSVQIDPSDSVPLWP*LCAFHWELGDQLFV Trigger: GACGAAGAGCTGGTCGCCAAGTTCCCAGTGGAAGGCACACAGCCACGGCCACAGTGGAACGCTATCACTGGGGTCTATCTGTACCGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CCA 90 bp | CTGGTTCTCTCGGTACAGATAGACCCCAGTGATAGCGTTCCACTGTaGCCGTGGCTGTGTGCCTTCCACTGGGAACTTGGCGACCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVLSVQIDPSDSVPL*PWLCAFHWELGDQL Trigger: GAGCTGGTCGCCAAGTTCCCAGTGGAAGGCACACAGCCACGGCCACAGTGGAACGCTATCACTGGGGTCTATCTGTACCGAGAGAACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CCA 90 bp | TTCTTGGCCCTCCGGTACTGGCACTCGGCGACTAGGTTCCAAGTGTaGTTGTTGAGAATGACTCCGATAAGGAAGAGGGCCAGCGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLALRYWHSATRFQV*LLRMTPIRKRASAG Trigger: GCCTGCGCTGGCCCTCTTCCTTATCGGAGTCATTCTCAACAACCACACTTGGAACCTAGTCGCCGAGTGCCAGTACCGGAGGGCCAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS TCA 90 bp | TGCCTTCCACTGGGAACTTGGCGACCAGCTCTTCGTCATCCTTGTTaGGAGCCACAAAGCCAAAGAAACGGCGCACGTTGTTGGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLPLGTWRPALRHPC*EPQSQRNGARCWRP Trigger: TGGCCGCCAACAACGTGCGCCGTTTCTTTGGCTTTGTGGCTCTCAACAAGGATGACGAAGAGCTGGTCGCCAAGTTCCCAGTGGAAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS-3UTR CAA 90 bp | AACCCAGAAGTACTCACTGGAATCCAGTGGATGGAGGCCCACACCAGAGAAGTAAAACGGCGCACGTTGTaGGCGGCCAGCACCCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: NPEVLTGIQWMEAHTREVKRRTL*AASTLE Trigger: TTCGAGGGTGCTGGCCGCCAACAACGTGCGCCGTTT...TACTTCTCTGGTGTGGGCCTCCATCCACTGGATTCCAGTGAGTACTTCTGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS CCA 90 bp | GTTGGTACGGTACTGAGCCCAGTAGGCCTCCTGACGGTAGCTGAGTaGCGAGCAGTAATGTTTGAGGCACTTGGTCAGGAACACCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VGTVLSPVGLLTVAE*RAVMFEALGQEHQD Trigger: ATCCTGGTGTTCCTGACCAAGTGCCTCAAACATTACTGCTCGCCACTCAGCTACCGTCAGGAGGCCTACTGGGCTCAGTACCGTACCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS-3UTR CAA 90 bp | CAGACGCACGGTGTTATCATACGGGTCAAGGACTATGGCTGCATTGTGAAGTTCCTTAGGAGGAGGAAGTaGGGGGCCGCGGAGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QTHGVIIRVKDYGCIVKFLRRRK*GAAEQF Trigger: GAACTGCTCCGCGGCCCCCAACTTCCTCCTCCTAAG...GAACTTCACAATGCAGCCATAGTCCTTGACCCGTATGATAACACCGTGCGTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR CAA 90 bp | GTGTACTATACAATGAAGGCTTCCCAGTGGGTTGTCAACAGGCTTCACCAGCTGAAACGGCGCACGTTGTaGGCGGCCAGCACCCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: VYYTMKASQWVVNRLHQLKRRTL*AASTLE Trigger: TTCGAGGGTGCTGGCCGCCAACAACGTGCGCCGTTT...CAGCTGGTGAAGCCTGTTGACAACCCACTGGGAAGCCTTCATTGTATAGTACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTGTGTCGGATGCCGGGAATCAAGACAGACAGGAAGAAGGTGAGGTTTGAGAGGGCCATCTCCACATaGTCAGGGGCTGTGCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: WLCRMPGIKTDRKKVRFERAIST*SGAVPL Trigger: TAATGGCACAGCCCCTGACAATGTGGAGATGGCCCT...CTCAAACCTCACCTTCTTCCTGTCTGTCTTGATTCCCGGCATCCGACACAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTCTTTAAGTTTTCTATGGGAAATGGCTGTGTCGGATGCCGGGAATCAAGACTTAGGAGGAGGAAGTaGGGGGCCGCGGAGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLFKFSMGNGCVGCRESRLRRRK*GAAEQF Trigger: GAACTGCTCCGCGGCCCCCAACTTCCTCCTCCTAAG...TCTTGATTCCCGGCATCCGACACAGCCATTTCCCATAGAAAACTTAAAGAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CAA 90 bp | CAAGTTCCCTGGTCCCTCATAGTGAAGGAAGAGAACCTTGCTCTGAGCTGTGCAAGGGCCACCAGCCCATaGAAAATCATCACATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QVPWSLIVKEENLALSCARATSP*KIITSL Trigger: CAAGGATGTGATGATTTTCAATGGGCTGGTGGCCCT...TGCACAGCTCAGAGCAAGGTTCTCTTCCTTCACTATGAGGGACCAGGGAACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR CAA 90 bp | GTGTACTATACAATGAAGGCTTCCCAGTGGGTTGTCAACAGGCTTCACCAGCTGAGCTCTTCGTCATCCTaGTTGAGAGCCACAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VYYTMKASQWVVNRLHQLSSSSS*LRATKP Trigger: TGGCTTTGTGGCTCTCAACAAGGATGACGAAGAGCT...CAGCTGGTGAAGCCTGTTGACAACCCACTGGGAAGCCTTCATTGTATAGTACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTATGGGAAATGGCTGTGTCGGATGCCGGGAATCAAGACAGACAGGAAGAAAGGGCCACCAGCCCATaGAAAATCATCACATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLWEMAVSDAGNQDRQEERATSP*KIITSL Trigger: CAAGGATGTGATGATTTTCAATGGGCTGGTGGCCCT...TTCTTCCTGTCTGTCTTGATTCCCGGCATCCGACACAGCCATTTCCCATAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCTATGGGAAATGGCTGTGTCGGATGCCGGGAATCAAGACAGACAGGAATCTTCGTCATCCTTGTaGAGAGCCACAAAGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SFLWEMAVSDAGNQDRQESSSSL*RATKPK Trigger: CTTTGGCTTTGTGGCTCTCAACAAGGATGACGAAGA...TTCCTGTCTGTCTTGATTCCCGGCATCCGACACAGCCATTTCCCATAGAAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CAA 90 bp | AACCCAGAAGTACTCACTGGAATCCAGTGGATGGAGGCCCACACCAGAGAAGTAAAAATCATCACATCCTaGCTCTTGAAGAAGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NPEVLTGIQWMEAHTREVKIITS*LLKKRD Trigger: GTCTCTCTTCTTCAAGAGCAAGGATGTGATGATTTT...TACTTCTCTGGTGTGGGCCTCCATCCACTGGATTCCAGTGAGTACTTCTGGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTACTTTCTGATAGCTGTGAGCAGAGTGTGCTAGTGGCCACGGGAGAAATGAAAATCATCACATCCTaGCTCTTGAAGAAGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KVLSDSCEQSVLVATGEMKIITS*LLKKRD Trigger: GTCTCTCTTCTTCAAGAGCAAGGATGTGATGATTTT...CATTTCTCCCGTGGCCACTAGCACACTCTGCTCACAGCTATCAGAAAGTACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTCTTTAAGTTTTCTATGGGAAATGGCTGTGTCGGATGCCGGGAATCAAGATTCCAAGTGTGGTTGTaGAGAATGACTCCGATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLFKFSMGNGCVGCRESRFQVWL*RMTPIR Trigger: CCTTATCGGAGTCATTCTCAACAACCACACTTGGAA...TCTTGATTCCCGGCATCCGACACAGCCATTTCCCATAGAAAACTTAAAGAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035822.2 |
||
| CDS-3UTR CAA 90 bp | ACCATGAGAGGTTTCCAACAAATAATTGAATCCCTTGAGAATCTCGTTATAAGAAGCTCTTCGTCATCCTaGTTGAGAGCCACAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TMRGFQQIIESLENLVIRSSSSS*LRATKP Trigger: TGGCTTTGTGGCTCTCAACAAGGATGACGAAGAGCT...TCTTATAACGAGATTCTCAAGGGATTCAATTATTTGTTGGAAACCTCTCATGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS-3UTR CAA 90 bp | ACCATGAGAGGTTTCCAACAAATAATTGAATCCCTTGAGAATCTCGTTATAAGATCTTCGTCATCCTTGTaGAGAGCCACAAAGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TMRGFQQIIESLENLVIRSSSSL*RATKPK Trigger: CTTTGGCTTTGTGGCTCTCAACAAGGATGACGAAGA...TCTTATAACGAGATTCTCAAGGGATTCAATTATTTGTTGGAAACCTCTCATGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140512.8 |
||
| CDS CAA 90 bp | GGAGCCACAGCTGCACGGCCCAGGATTGAGCTTAGGAGGAGGAAGTaGGGGGCCGCGGAGCAGTTCTTGGCCCTCCGGTACTGGCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: GATAARPRIELRRRK*GAAEQFLALRYWHS Trigger: CGAGTGCCAGTACCGGAGGGCCAAGAACTGCTCCGCGGCCCCCAACTTCCTCCTCCTAAGCTCAATCCTGGGCCGTGCAGCTGTGGCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 72 bp | GCTGCACGGCCCAGGATTGAGCTTAGGAGGAGGAAGTaGGGGGCCGCGGAGCAGTTCTTGGCCCTCCGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: AARPRIELRRRK*GAAEQFLALRY Trigger: GTACCGGAGGGCCAAGAACTGCTCCGCGGCCCCCAACTTCCTCCTCCTAAGCTCAATCCTGGGCCGTGCAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 72 bp | AGCCTGCGGCTGACCTCCTCTCGGAAGCTCGATAGGTaGGCGGGGCCCTCTCCACAAGGGAACCTGGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLRLTSSRKLDR*AGPSPQGNLAR Trigger: CCTAGCCAGGTTCCCTTGTGGAGAGGGCCCCGCCAACCTATCGAGCTTCCGAGAGGAGGTCAGCCGCAGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS GCA 72 bp | AAACGGCGCACGTTGTTGGCGGCCAGCACCCTCGAATaGACCTCTGCTGTGCGCTGGAACAACTGGTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: KRRTLLAASTLE*TSAVRWNNWSS Trigger: CGAGGACCAGTTGTTCCAGCGCACAGCAGAGGTGCATTCGAGGGTGCTGGCCGCCAACAACGTGCGCCGTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CCA 72 bp | TTGGGGGCCGCGGAGCAGTTCTTGGCCCTCCGGTACTaGCACTCGGCGACTAGGTTCCAAGTGTGGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LGAAEQFLALRY*HSATRFQVWLL Trigger: CAACAACCACACTTGGAACCTAGTCGCCGAGTGCCAGTACCGGAGGGCCAAGAACTGCTCCGCGGCCCCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 90 bp | TCATACTTGAGCCTGCGGCTGACCTCCTCTCGGAAGCTCGATAGGTaGGCGGGGCCCTCTCCACAAGGGAACCTGGCTAGGACCTCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: SYLSLRLTSSRKLDR*AGPSPQGNLARTSV Trigger: TACGGAGGTCCTAGCCAGGTTCCCTTGTGGAGAGGGCCCCGCCAACCTATCGAGCTTCCGAGAGGAGGTCAGCCGCAGGCTCAAGTATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS GCA 72 bp | CACGTTGTTGGCGGCCAGCACCCTCGAATGCACCTCTaGTGTGCGCTGGAACAACTGGTCCTCGTTGGTACG | + |
|
Preference number: 6 (lower is better) Translates to: HVVGGQHPRMHL*CALEQLVLVGT Trigger: CGTACCAACGAGGACCAGTTGTTCCAGCGCACAGCAGAGGTGCATTCGAGGGTGCTGGCCGCCAACAACGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CCA 72 bp | GCACCTCTGCTGTGCGCTGGAACAACTGGTCCTCGTTaGTACGGTACTGAGCCCAGTAGGCCTCCTGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: APLLCAGTTGPR*YGTEPSRPPDG Trigger: ACCGTCAGGAGGCCTACTGGGCTCAGTACCGTACCAACGAGGACCAGTTGTTCCAGCGCACAGCAGAGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 90 bp | GCCCTCCGGTACTGGCACTCGGCGACTAGGTTCCAAGTGTGGTTGTaGAGAATGACTCCGATAAGGAAGAGGGCCAGCGCAGGCACGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALRYWHSATRFQVWL*RMTPIRKRASAGTP Trigger: TGGCGTGCCTGCGCTGGCCCTCTTCCTTATCGGAGTCATTCTCAACAACCACACTTGGAACCTAGTCGCCGAGTGCCAGTACCGGAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 72 bp | CACTGTGGCCGTGGCTGTGTGCCTTCCACTGGGAACTaGGCGACCAGCTCTTCGTCATCCTTGTTGAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: HCGRGCVPSTGN*ATSSSSSLLRA Trigger: GGCTCTCAACAAGGATGACGAAGAGCTGGTCGCCAAGTTCCCAGTGGAAGGCACACAGCCACGGCCACAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 90 bp | TTGGCCCTCCGGTACTGGCACTCGGCGACTAGGTTCCAAGTGTGGTaGTTGAGAATGACTCCGATAAGGAAGAGGGCCAGCGCAGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: LALRYWHSATRFQVW*LRMTPIRKRASAGT Trigger: CGTGCCTGCGCTGGCCCTCTTCCTTATCGGAGTCATTCTCAACAACCACACTTGGAACCTAGTCGCCGAGTGCCAGTACCGGAGGGCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 90 bp | TCGTCATCCTTGTTGAGAGCCACAAAGCCAAAGAAACGGCGCACGTaGTTGGCGGCCAGCACCCTCGAATGCACCTCTGCTGTGCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSLLRATKPKKRRT*LAASTLECTSAVRW Trigger: CCAGCGCACAGCAGAGGTGCATTCGAGGGTGCTGGCCGCCAACAACGTGCGCCGTTTCTTTGGCTTTGTGGCTCTCAACAAGGATGACGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 90 bp | TCATCCTTGTTGAGAGCCACAAAGCCAAAGAAACGGCGCACGTTGTaGGCGGCCAGCACCCTCGAATGCACCTCTGCTGTGCGCTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSLLRATKPKKRRTL*AASTLECTSAVRWN Trigger: GTTCCAGCGCACAGCAGAGGTGCATTCGAGGGTGCTGGCCGCCAACAACGTGCGCCGTTTCTTTGGCTTTGTGGCTCTCAACAAGGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 90 bp | GTGCCTTCCACTGGGAACTTGGCGACCAGCTCTTCGTCATCCTTGTaGAGAGCCACAAAGCCAAAGAAACGGCGCACGTTGTTGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VPSTGNLATSSSSSL*RATKPKKRRTLLAA Trigger: GGCCGCCAACAACGTGCGCCGTTTCTTTGGCTTTGTGGCTCTCAACAAGGATGACGAAGAGCTGGTCGCCAAGTTCCCAGTGGAAGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CCA 72 bp | AGCGTTCCACTGTGGCCGTGGCTGTGTGCCTTCCACTaGGAACTTGGCGACCAGCTCTTCGTCATCCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SVPLWPWLCAFH*ELGDQLFVILV Trigger: AACAAGGATGACGAAGAGCTGGTCGCCAAGTTCCCAGTGGAAGGCACACAGCCACGGCCACAGTGGAACGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CCA 72 bp | TCGGTACAGATAGACCCCAGTGATAGCGTTCCACTGTaGCCGTGGCTGTGTGCCTTCCACTGGGAACTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SVQIDPSDSVPL*PWLCAFHWELG Trigger: GCCAAGTTCCCAGTGGAAGGCACACAGCCACGGCCACAGTGGAACGCTATCACTGGGGTCTATCTGTACCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 72 bp | TTGAGAGCCACAAAGCCAAAGAAACGGCGCACGTTGTaGGCGGCCAGCACCCTCGAATGCACCTCTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LRATKPKKRRTL*AASTLECTSAV Trigger: CACAGCAGAGGTGCATTCGAGGGTGCTGGCCGCCAACAACGTGCGCCGTTTCTTTGGCTTTGTGGCTCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 90 bp | ATAGCGTTCCACTGTGGCCGTGGCTGTGTGCCTTCCACTGGGAACTaGGCGACCAGCTCTTCGTCATCCTTGTTGAGAGCCACAAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: IAFHCGRGCVPSTGN*ATSSSSSLLRATKP Trigger: TGGCTTTGTGGCTCTCAACAAGGATGACGAAGAGCTGGTCGCCAAGTTCCCAGTGGAAGGCACACAGCCACGGCCACAGTGGAACGCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 90 bp | TGTGTGCCTTCCACTGGGAACTTGGCGACCAGCTCTTCGTCATCCTaGTTGAGAGCCACAAAGCCAAAGAAACGGCGCACGTTGTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CVPSTGNLATSSSSS*LRATKPKKRRTLLA Trigger: CGCCAACAACGTGCGCCGTTTCTTTGGCTTTGTGGCTCTCAACAAGGATGACGAAGAGCTGGTCGCCAAGTTCCCAGTGGAAGGCACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CCA 72 bp | CTCCGGTACTGGCACTCGGCGACTAGGTTCCAAGTGTaGTTGTTGAGAATGACTCCGATAAGGAAGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRYWHSATRFQV*LLRMTPIRKRA Trigger: GGCCCTCTTCCTTATCGGAGTCATTCTCAACAACCACACTTGGAACCTAGTCGCCGAGTGCCAGTACCGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CCA 72 bp | GTACTGAGCCCAGTAGGCCTCCTGACGGTAGCTGAGTaGCGAGCAGTAATGTTTGAGGCACTTGGTCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VLSPVGLLTVAE*RAVMFEALGQE Trigger: TTCCTGACCAAGTGCCTCAAACATTACTGCTCGCCACTCAGCTACCGTCAGGAGGCCTACTGGGCTCAGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 72 bp | CGGTACTGGCACTCGGCGACTAGGTTCCAAGTGTGGTaGTTGAGAATGACTCCGATAAGGAAGAGGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RYWHSATRFQVW*LRMTPIRKRAS Trigger: GCTGGCCCTCTTCCTTATCGGAGTCATTCTCAACAACCACACTTGGAACCTAGTCGCCGAGTGCCAGTACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 72 bp | TCCACTGGGAACTTGGCGACCAGCTCTTCGTCATCCTaGTTGAGAGCCACAAAGCCAAAGAAACGGCGCACG | + |
|
Preference number: 6 (lower is better) Translates to: STGNLATSSSSS*LRATKPKKRRT Trigger: CGTGCGCCGTTTCTTTGGCTTTGTGGCTCTCAACAAGGATGACGAAGAGCTGGTCGCCAAGTTCCCAGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS TCA 72 bp | CTGGGAACTTGGCGACCAGCTCTTCGTCATCCTTGTTaGGAGCCACAAAGCCAAAGAAACGGCGCACGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGTWRPALRHPC*EPQSQRNGARC Trigger: ACAACGTGCGCCGTTTCTTTGGCTTTGTGGCTCTCAACAAGGATGACGAAGAGCTGGTCGCCAAGTTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 72 bp | TACTGGCACTCGGCGACTAGGTTCCAAGTGTGGTTGTaGAGAATGACTCCGATAAGGAAGAGGGCCAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: YWHSATRFQVWL*RMTPIRKRASA Trigger: TGCGCTGGCCCTCTTCCTTATCGGAGTCATTCTCAACAACCACACTTGGAACCTAGTCGCCGAGTGCCAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||
| CDS CAA 72 bp | ACTGGGAACTTGGCGACCAGCTCTTCGTCATCCTTGTaGAGAGCCACAAAGCCAAAGAAACGGCGCACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TGNLATSSSSSL*RATKPKKRRTL Trigger: CAACGTGCGCCGTTTCTTTGGCTTTGTGGCTCTCAACAAGGATGACGAAGAGCTGGTCGCCAAGTTCCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035822.2 ENSMUST00000140512.8 |
||