Pregenerated sensors for CALHM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079258Ensembl transcript IDs: ENSMUST00000111813.3
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCTTTGAAGTaGTATGGGTTCAGATCTCCACTCCTACCTCTGCAGCCAGCTACA | + |
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Preference number: 1 (lower is better) Translates to: AGFVAMPQNYCSSLK*YGFRSPLLPLQPAT Trigger: TGTAGCTGGCTGCAGAGGTAGGAGTGGAGATCTGAACCCATAGCACTTCAAAGAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| 3UTR-3UTR CCA 90 bp | TTTTCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTTGAAGTGCTATaGGTTCAGATCTCCACTCCT | + |
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Preference number: 2 (lower is better) Translates to: FSRQQVNGWICGYASELLFFEVL*VQISTP Trigger: AGGAGTGGAGATCTGAACCCATAGCACTTCAAAGAA...CAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| 3UTR TCA 72 bp | GATTTGTGGCTATGCCTCAGAATTATTGTTCTTCTTTaGAGTGCTATGGGTTCAGATCTCCACTCCTACCTC | + |
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Preference number: 3 (lower is better) Translates to: DLWLCLRIIVLL*SAMGSDLHSYL Trigger: GAGGTAGGAGTGGAGATCTGAACCCATAGCACTTCAAAGAAGAACAATAATTCTGAGGCATAGCCACAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR GCA 90 bp | TTCTTTGAAGTGCTATGGGTTCAGATCTCCACTCCTACCTCTGCAGCCAGCTACAGGTGGCCACTTCCTTaGGTGGAGGCCGGGGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: FFEVLWVQISTPTSAASYRWPLP*VEAGAR Trigger: GCGAGCCCCGGCCTCCACGCAAGGAAGTGGCCACCT...GTAGCTGGCTGCAGAGGTAGGAGTGGAGATCTGAACCCATAGCACTTCAAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR GCA 90 bp | TCTTTGAAGTGCTATGGGTTCAGATCTCCACTCCTACCTCTGCAGCCAGCTACAGGCCCGGCACCAGGCTaGCATTGCCTAGTGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SLKCYGFRSPLLPLQPATGPAPG*HCLVWP Trigger: TGGCCACACTAGGCAATGGCAGCCTGGTGCCGGGCC...TGTAGCTGGCTGCAGAGGTAGGAGTGGAGATCTGAACCCATAGCACTTCAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR GCA 90 bp | CCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCTTCTTGGCCCGGCGACCTaGGGGGCGCTTCCACTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PAGEWLDLWLCLRIIVLLLGPAT*GALPLF Trigger: GAAGAGTGGAAGCGCCCCGCAGGTCGCCGGGCCAAG...AAGAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CCA 90 bp | TCTTTGAAGTGCTATGGGTTCAGATCTCCACTCCTACCTCTGCAGCCAGCTACAATCAGTGGTGCCTCCTaGCCCAGCCTCAGTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SLKCYGFRSPLLPLQPATISGAS*PSLSGG Trigger: ACCACCACTGAGGCTGGGCCAGGAGGCACCACTGAT...TGTAGCTGGCTGCAGAGGTAGGAGTGGAGATCTGAACCCATAGCACTTCAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CCA 90 bp | CGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCGCCGTTGCTCATCAGTaGTGCCTCCTGGCCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RQQVNGWICGYASELLFFAVAHQ*CLLAQP Trigger: AGGCTGGGCCAGGAGGCACCACTGATGAGCAACGGC...GAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR GCA 90 bp | TTCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCCCCAGCCCAGCCGTTaGTCATCAGTGGTGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: FTPAGEWLDLWLCLRIIVPQPSR*SSVVPP Trigger: AGGAGGCACCACTGATGAGCAACGGCTGGGCTGGGG...AACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CCA 90 bp | CAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCTTTGAAGAACAGCTGGGTCCTTaGCCCGGCGACCTGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QVNGWICGYASELLFFFEEQLGP*PGDLRG Trigger: GCCCCGCAGGTCGCCGGGCCAAGGACCCAGCTGTTC...TTCAAAGAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR TCA 90 bp | CCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCTTAGACGACAGGGGCGATaGGAGCTCTCTGGGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: PAGEWLDLWLCLRIIVLLRRQGR*ELSGPW Trigger: CCATGGCCCAGAGAGCTCTCATCGCCCCTGTCGTCT...AAGAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR TCA 90 bp | TTTTTCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTTGCCATCCAGCAGTGTaGCAGCCACCCAGACGACAG | + |
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Preference number: 4 (lower is better) Translates to: FFTPAGEWLDLWLCLRIICHPAV*QPPRRQ Trigger: CTGTCGTCTGGGTGGCTGTCACACTGCTGGATGGCA...AATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR TCA 90 bp | TTCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTTGGTGCCTTGGTCAGTaGTGCCACGCAACTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: FTPAGEWLDLWLCLRIIVWCLGQ*CHATSP Trigger: GGGAGAAGTTGCGTGGCATCACTGACCAAGGCACCA...AACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR TCA 90 bp | TTTTCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGGACCAACCCAGTGCCTaGGAGATGCAGCGCAAATAC | + |
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Preference number: 4 (lower is better) Translates to: FSRQQVNGWICGYASELLDQPSA*EMQRKY Trigger: GTATTTGCGCTGCATCTCTCAGGCACTGGGTTGGTC...CAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CCA 90 bp | TTCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTGCCCAGCCTCAGTGGTaGTTTGCATTTGTGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FTPAGEWLDLWLCLRIIVAQPQW*FAFVPA Trigger: AGCTGGCACAAATGCAAACCACCACTGAGGCTGGGC...AACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR GCA 90 bp | CCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCTTTTGAGAAAGGCGACCTaGGTGAAGCAGGGACGCACA | + |
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Preference number: 4 (lower is better) Translates to: PAGEWLDLWLCLRIIVLLLRKAT*VKQGRT Trigger: TGTGCGTCCCTGCTTCACGCAGGTCGCCTTTCTCAA...AAGAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR GCA 90 bp | TGTTCTTCTTTGAAGTGCTATGGGTTCAGATCTCCACTCCTACCTCTGCAGCCAGCAAAGGCTTTGGCATaGTCTGTGCATGTCTCATCG | + |
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Preference number: 4 (lower is better) Translates to: CSSLKCYGFRSPLLPLQPAKALA*SVHVSS Trigger: CGATGAGACATGCACAGAGCATGCCAAAGCCTTTGC...TGGCTGCAGAGGTAGGAGTGGAGATCTGAACCCATAGCACTTCAAAGAAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR GCA 90 bp | TCTTTGAAGTGCTATGGGTTCAGATCTCCACTCCTACCTCTGCAGCCAGCTACAGGTGGTTTGCATTTGTaGCAGCTTGTGAGTAGCCTA | + |
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Preference number: 4 (lower is better) Translates to: SLKCYGFRSPLLPLQPATGGLHL*QLVSSL Trigger: TAGGCTACTCACAAGCTGGCACAAATGCAAACCACC...TGTAGCTGGCTGCAGAGGTAGGAGTGGAGATCTGAACCCATAGCACTTCAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CCA 90 bp | TCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCGAGCTCTCTGGGCCATaGAACAGAACATGTAGCGTA | + |
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Preference number: 4 (lower is better) Translates to: SRQQVNGWICGYASELLFELSGP*NRTCSV Trigger: TACGCTACATGTTCTGTTCCATGGCCCAGAGAGCTC...GAACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CCA 90 bp | CCTCAGAATTATTGTTCTTCTTTGAAGTGCTATGGGTTCAGATCTCCACTCCTATGCCATTGCCTAGTGTaGCCACGGGCACAGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: PQNYCSSLKCYGFRSPLLCHCLV*PRAQLC Trigger: GCACAGCTGTGCCCGTGGCCACACTAGGCAATGGCA...TAGGAGTGGAGATCTGAACCCATAGCACTTCAAAGAAGAACAATAATTCTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CCA 90 bp | GGAATTTCCTTTTTCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCCCAGGTCATGGTTCATaGCTTCAAAGAACTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GISFFTPAGEWLDLWLCLPGHGS*LQRTAG Trigger: TCCAGCAGTTCTTTGAAGCCATGAACCATGACCTGG...GAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGAAAAAGGAAATTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CCA 90 bp | AATTATTGTTCTTCTTTGAAGTGCTATGGGTTCAGATCTCCACTCCTACCTCTGCTGTGGCTGTGGCCGTaGCCAGTACTCCGTGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: NYCSSLKCYGFRSPLLPLLWLWP*PVLRGY Trigger: ATACCCACGGAGTACTGGCCACGGCCACAGCCACAG...CAGAGGTAGGAGTGGAGATCTGAACCCATAGCACTTCAAAGAAGAACAATAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR TCA 90 bp | CAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCTTTAGTACTCCGTGGGTATaGCCCAGTTCCAGGTCATGG | + |
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Preference number: 4 (lower is better) Translates to: QQVNGWICGYASELLFFFSTPWV*PSSRSW Trigger: CCATGACCTGGAACTGGGTCATACCCACGGAGTACT...AAAGAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR GCA 90 bp | ATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCTTTGAAGTGCTATGTTGCTCATCAGTGGTaGCTCCTGGCCCAGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: MAGFVAMPQNYCSSLKCYVAHQW*LLAQPQ Trigger: CTGAGGCTGGGCCAGGAGGCACCACTGATGAGCAAC...ATAGCACTTCAAAGAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR TCA 90 bp | TCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCCACAGATGCCATTCATaGAGGACTCTTGGTTGGATT | + |
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Preference number: 4 (lower is better) Translates to: SRQQVNGWICGYASELLFHRCHS*RTLGWI Trigger: AATCCAACCAAGAGTCCTTCATGAATGGCATCTGTG...GAACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR TCA 90 bp | TTTTCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGATTTGTGCCAGCTTGTaGGTAGCCTATTCATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: FSRQQVNGWICGYASELLICASL*VAYSWC Trigger: GCACCATGAATAGGCTACTCACAAGCTGGCACAAAT...CAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR GCA 90 bp | ATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCTTTGAAGTGCTATGAAGGACCAACCCAGTaGCTGAGAGATGCAGCGCAA | + |
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Preference number: 4 (lower is better) Translates to: MAGFVAMPQNYCSSLKCYEGPTQ*LRDAAQ Trigger: TTGCGCTGCATCTCTCAGGCACTGGGTTGGTCCTTC...ATAGCACTTCAAAGAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CCA 90 bp | CCTCAGAATTATTGTTCTTCTTTGAAGTGCTATGGGTTCAGATCTCCACTCCTACGAACGCTAGTAATGTaGTCAGCAGCACGAAGGACC | + |
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Preference number: 4 (lower is better) Translates to: PQNYCSSLKCYGFRSPLLRTLVM*SAARRT Trigger: GGTCCTTCGTGCTGCTGACCACATTACTAGCGTTCG...TAGGAGTGGAGATCTGAACCCATAGCACTTCAAAGAAGAACAATAATTCTGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CCA 90 bp | CAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCTTTGAACTATTCATGGTGCCTTaGTCAGTGATGCCACGCAAC | + |
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Preference number: 4 (lower is better) Translates to: QVNGWICGYASELLFFFELFMVP*SVMPRN Trigger: GTTGCGTGGCATCACTGACCAAGGCACCATGAATAG...TTCAAAGAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR TCA 90 bp | CAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCTTTGAAGTAAGCAGGGGCAGTTaGAGTCAAAGGCAGAATACA | + |
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Preference number: 4 (lower is better) Translates to: QVNGWICGYASELLFFFEVSRGS*SQRQNT Trigger: TGTATTCTGCCTTTGACTTCAACTGCCCCTGCTTAC...TTCAAAGAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR GCA 90 bp | TTTTTCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTTCTCATCGAAGAGCTTaGGCTCAATGTCAATGTAGT | + |
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Preference number: 4 (lower is better) Translates to: FFTPAGEWLDLWLCLRIISHRRA*AQCQCS Trigger: ACTACATTGACATTGAGCGCAAGCTCTTCGATGAGA...AATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR GCA 90 bp | AATTATTGTTCTTCTTTGAAGTGCTATGGGTTCAGATCTCCACTCCTACCTCTGGACTCTTGGTTGGATTaGAAGAACTGGAAGATCATC | + |
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Preference number: 4 (lower is better) Translates to: NYCSSLKCYGFRSPLLPLDSWLD*KNWKII Trigger: GATGATCTTCCAGTTCTTGCAATCCAACCAAGAGTC...CAGAGGTAGGAGTGGAGATCTGAACCCATAGCACTTCAAAGAAGAACAATAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CCA 90 bp | AATTATTGTTCTTCTTTGAAGTGCTATGGGTTCAGATCTCCACTCCTACCTCTGTTCATGAAGGACTCTTaGTTGGATTGCAAGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: NYCSSLKCYGFRSPLLPLFMKDS*LDCKNW Trigger: CCAGTTCTTGCAATCCAACCAAGAGTCCTTCATGAA...CAGAGGTAGGAGTGGAGATCTGAACCCATAGCACTTCAAAGAAGAACAATAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR TCA 90 bp | ATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCTTTGAAGTGCTATATATGTTGTTGTTCATaGCCAGACCAAGCAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: MAGFVAMPQNYCSSLKCYICCCS*PDQAGR Trigger: TCTTCCTGCTTGGTCTGGTCATGAACAACAACATAT...ATAGCACTTCAAAGAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR GCA 90 bp | ATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCTTTGAAGTGCTATATGGCTTCAAAGAACTaGTGGATACATACCTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: MAGFVAMPQNYCSSLKCYMASKN*WIHTLA Trigger: TGCTAAGGTATGTATCCAGCAGTTCTTTGAAGCCAT...ATAGCACTTCAAAGAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CCA 90 bp | CAGAATTATTGTTCTTCTTTGAAGTGCTATGGGTTCAGATCTCCACTCCTACCTTTGGATTGCAAGAACTaGAAGATCATCCGAAACTTA | + |
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Preference number: 4 (lower is better) Translates to: QNYCSSLKCYGFRSPLLPLDCKN*KIIRNL Trigger: TAAGTTTCGGATGATCTTCCAGTTCTTGCAATCCAA...AGGTAGGAGTGGAGATCTGAACCCATAGCACTTCAAAGAAGAACAATAATTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS GCA 90 bp | TGGAGGCCGGGGCTCGCCCCCAGCCCAGCCGTTGCTCATCAGTGGTaGCTCCTGGCCCAGCCTCAGTGGTGGTTTGCATTTGTGCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: WRPGLAPSPAVAHQW*LLAQPQWWFAFVPA Trigger: AGCTGGCACAAATGCAAACCACCACTGAGGCTGGGCCAGGAGGCACCACTGATGAGCAACGGCTGGGCTGGGGGCGAGCCCCGGCCTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS GCA 90 bp | CCAGTAGGCGAGCAAGTTCTGGAGCAGGCAGGCCCGGCACCAGGCTaGCATTGCCTAGTGTGGCCACGGGCACAGCTGTGCAGAAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: PVGEQVLEQAGPAPG*HCLVWPRAQLCRRH Trigger: GTGCCTTCTGCACAGCTGTGCCCGTGGCCACACTAGGCAATGGCAGCCTGGTGCCGGGCCTGCCTGCTCCAGAACTTGCTCGCCTACTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS GCA 90 bp | GGCGAGCAAGTTCTGGAGCAGGCAGGCCCGGCACCAGGCTGCCATTaGCTAGTGTGGCCACGGGCACAGCTGTGCAGAAGGCACAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: GEQVLEQAGPAPGCH*LVWPRAQLCRRHRE Trigger: TTCTCTGTGCCTTCTGCACAGCTGTGCCCGTGGCCACACTAGGCAATGGCAGCCTGGTGCCGGGCCTGCCTGCTCCAGAACTTGCTCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS CCA 90 bp | CGGGGCTCGCCCCCAGCCCAGCCGTTGCTCATCAGTGGTGCCTCCTaGCCCAGCCTCAGTGGTGGTTTGCATTTGTGCCAGCTTGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: RGSPPAQPLLISGAS*PSLSGGLHLCQLVS Trigger: ACTCACAAGCTGGCACAAATGCAAACCACCACTGAGGCTGGGCCAGGAGGCACCACTGATGAGCAACGGCTGGGCTGGGGGCGAGCCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS CCA 90 bp | TCTGGGCCATGGAACAGAACATGTAGCGTAGAACAGCTGGGTCCTTaGCCCGGCGACCTGCGGGGCGCTTCCACTCTTCAGCTAGCATGG | + |
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Preference number: 5 (lower is better) Translates to: SGPWNRTCSVEQLGP*PGDLRGASTLQLAW Trigger: CCATGCTAGCTGAAGAGTGGAAGCGCCCCGCAGGTCGCCGGGCCAAGGACCCAGCTGTTCTACGCTACATGTTCTGTTCCATGGCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CAA 90 bp | CGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCCCCCCAGCCCAGCCGTaGCTCATCAGTGGTGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: RQQVNGWICGYASELLFFPPAQP*LISGAS Trigger: GGAGGCACCACTGATGAGCAACGGCTGGGCTGGGGG...GAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS TCA 90 bp | CGGGGCGCTTCCACTCTTCAGCTAGCATGGATATGTTGTTGTTCATaGCCAGACCAAGCAGGAAGAGCACCAGGGGAGGCGTCAGCAGTA | + |
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Preference number: 5 (lower is better) Translates to: RGASTLQLAWICCCS*PDQAGRAPGEASAV Trigger: TACTGCTGACGCCTCCCCTGGTGCTCTTCCTGCTTGGTCTGGTCATGAACAACAACATATCCATGCTAGCTGAAGAGTGGAAGCGCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CAA 90 bp | CGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCCCTGTCCGAGGGACTTaGGACAGCCTCTGTGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: RQQVNGWICGYASELLFFPVRGT*DSLCGC Trigger: ACAGCCACAGAGGCTGTCCAAAGTCCCTCGGACAGG...GAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS CCA 90 bp | GGTTTGCATTTGTGCCAGCTTGTGAGTAGCCTATTCATGGTGCCTTaGTCAGTGATGCCACGCAACTTCTCCCTCTCTTCTTCTGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GLHLCQLVSSLFMVP*SVMPRNFSLSSSVL Trigger: CAGGACAGAAGAAGAGAGGGAGAAGTTGCGTGGCATCACTGACCAAGGCACCATGAATAGGCTACTCACAAGCTGGCACAAATGCAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CAA 90 bp | GGAATTTCCTTTTTCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCCCTATTCATGGTGCCTaGGTCAGTGATGCCACGCAA | + |
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Preference number: 5 (lower is better) Translates to: GISFFTPAGEWLDLWLCLPIHGA*VSDATQ Trigger: TTGCGTGGCATCACTGACCAAGGCACCATGAATAGG...GAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGAAAAAGGAAATTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CAA 90 bp | TTTTCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGGGTAAGCAGGGGCAGTaGAAGTCAAAGGCAGAATAC | + |
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Preference number: 5 (lower is better) Translates to: FSRQQVNGWICGYASELLGKQGQ*KSKAEY Trigger: GTATTCTGCCTTTGACTTCAACTGCCCCTGCTTACC...CAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CAA 90 bp | TCGGAATTTCCTTTTTCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCAGCATGGATATGTTGTaGTTCATGACCAGACCAAGC | + |
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Preference number: 5 (lower is better) Translates to: SEFPFSRQQVNGWICGYASMDML*FMTRPS Trigger: GCTTGGTCTGGTCATGAACAACAACATATCCATGCT...GGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGAAAAAGGAAATTCCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CAA 90 bp | CAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCTTTGACCAGTACTTGCTCTaGAGAAAGGCGACCTGCGTG | + |
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Preference number: 5 (lower is better) Translates to: QQVNGWICGYASELLFFFDQYLL*RKATCV Trigger: CACGCAGGTCGCCTTTCTCAAGAGCAAGTACTGGTC...AAAGAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS GCA 90 bp | GCTTCAAAGAACTGCTGGATACATACCTTAGCAAAGGCTTTGGCATaGTCTGTGCATGTCTCATCGAAGAGCTTGCGCTCAATGTCAATG | + |
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Preference number: 5 (lower is better) Translates to: ASKNCWIHTLAKALA*SVHVSSKSLRSMSM Trigger: CATTGACATTGAGCGCAAGCTCTTCGATGAGACATGCACAGAGCATGCCAAAGCCTTTGCTAAGGTATGTATCCAGCAGTTCTTTGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CAA 90 bp | CAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTCTTCTTTGCACAGAGAAAGCACTaGCCATCCAGCAGTGTGACA | + |
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Preference number: 5 (lower is better) Translates to: QQVNGWICGYASELLFFFAQRKH*PSSSVT Trigger: TGTCACACTGCTGGATGGCAAGTGCTTTCTCTGTGC...AAAGAAGAACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CAA 90 bp | TTTTTCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTAGTGGTGGTTTGCATTaGTGCCAGCTTGTGAGTAGC | + |
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Preference number: 5 (lower is better) Translates to: FFTPAGEWLDLWLCLRIISGGLH*CQLVSS Trigger: GCTACTCACAAGCTGGCACAAATGCAAACCACCACT...AATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CAA 90 bp | GCCTCAGAATTATTGTTCTTCTTTGAAGTGCTATGGGTTCAGATCTCCACTCCTAGCCTCAGTGGTGGTTaGCATTTGTGCCAGCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: ASELLFFFEVLWVQISTPSLSGG*HLCQLV Trigger: CACAAGCTGGCACAAATGCAAACCACCACTGAGGCT...AGGAGTGGAGATCTGAACCCATAGCACTTCAAAGAAGAACAATAATTCTGAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CAA 90 bp | TTCACGCCAGCAGGTGAATGGCTGGATTTGTGGCTATGCCTCAGAATTATTGTTATTCATGAAGGACTCTaGGTTGGATTGCAAGAACTG | + |
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Preference number: 5 (lower is better) Translates to: FTPAGEWLDLWLCLRIIVIHEGL*VGLQEL Trigger: CAGTTCTTGCAATCCAACCAAGAGTCCTTCATGAAT...AACAATAATTCTGAGGCATAGCCACAAATCCAGCCATTCACCTGCTGGCGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CAA 90 bp | CCTCAGAATTATTGTTCTTCTTTGAAGTGCTATGGGTTCAGATCTCCACTCCTAGGACTCTTGGTTGGATaGCAAGAACTGGAAGATCAT | + |
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Preference number: 5 (lower is better) Translates to: PQNYCSSLKCYGFRSPLLGLLVG*QELEDH Trigger: ATGATCTTCCAGTTCTTGCAATCCAACCAAGAGTCC...TAGGAGTGGAGATCTGAACCCATAGCACTTCAAAGAAGAACAATAATTCTGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS-3UTR CAA 90 bp | AATTATTGTTCTTCTTTGAAGTGCTATGGGTTCAGATCTCCACTCCTACCTCTGGCTAGCATGGATATGTaGTTGTTCATGACCAGACCA | + |
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Preference number: 5 (lower is better) Translates to: NYCSSLKCYGFRSPLLPLASMDM*LFMTRP Trigger: TGGTCTGGTCATGAACAACAACATATCCATGCTAGC...CAGAGGTAGGAGTGGAGATCTGAACCCATAGCACTTCAAAGAAGAACAATAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS GCA 72 bp | GTTCTGGAGCAGGCAGGCCCGGCACCAGGCTGCCATTaGCTAGTGTGGCCACGGGCACAGCTGTGCAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: VLEQAGPAPGCH*LVWPRAQLCRR Trigger: CCTTCTGCACAGCTGTGCCCGTGGCCACACTAGGCAATGGCAGCCTGGTGCCGGGCCTGCCTGCTCCAGAAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS GCA 72 bp | GAGCAAGTTCTGGAGCAGGCAGGCCCGGCACCAGGCTaGCATTGCCTAGTGTGGCCACGGGCACAGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: EQVLEQAGPAPG*HCLVWPRAQLC Trigger: GCACAGCTGTGCCCGTGGCCACACTAGGCAATGGCAGCCTGGTGCCGGGCCTGCCTGCTCCAGAACTTGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS CCA 72 bp | CCCCCAGCCCAGCCGTTGCTCATCAGTGGTGCCTCCTaGCCCAGCCTCAGTGGTGGTTTGCATTTGTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PPAQPLLISGAS*PSLSGGLHLCQ Trigger: CTGGCACAAATGCAAACCACCACTGAGGCTGGGCCAGGAGGCACCACTGATGAGCAACGGCTGGGCTGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS GCA 72 bp | CAAGCAGGAAGAGCACCAGGGGAGGCGTCAGCAGTATaGCCAGGCTGTAGACCACGTTGTAGCCGGGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: QAGRAPGEASAV*PGCRPRCSRVS Trigger: GCTTACCCGGCTACAACGTGGTCTACAGCCTGGGCATACTGCTGACGCCTCCCCTGGTGCTCTTCCTGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS CCA 72 bp | TGGAACAGAACATGTAGCGTAGAACAGCTGGGTCCTTaGCCCGGCGACCTGCGGGGCGCTTCCACTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: WNRTCSVEQLGP*PGDLRGASTLQ Trigger: CTGAAGAGTGGAAGCGCCCCGCAGGTCGCCGGGCCAAGGACCCAGCTGTTCTACGCTACATGTTCTGTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS CAA 90 bp | CGGCGACCTGCGGGGCGCTTCCACTCTTCAGCTAGCATGGATATGTaGTTGTTCATGACCAGACCAAGCAGGAAGAGCACCAGGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: RRPAGRFHSSASMDM*LFMTRPSRKSTRGG Trigger: GCCTCCCCTGGTGCTCTTCCTGCTTGGTCTGGTCATGAACAACAACATATCCATGCTAGCTGAAGAGTGGAAGCGCCCCGCAGGTCGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS CAA 90 bp | CGACCTGCGGGGCGCTTCCACTCTTCAGCTAGCATGGATATGTTGTaGTTCATGACCAGACCAAGCAGGAAGAGCACCAGGGGAGGCGTC | + |
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Preference number: 6 (lower is better) Translates to: RPAGRFHSSASMDML*FMTRPSRKSTRGGV Trigger: GACGCCTCCCCTGGTGCTCTTCCTGCTTGGTCTGGTCATGAACAACAACATATCCATGCTAGCTGAAGAGTGGAAGCGCCCCGCAGGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS TCA 72 bp | GCTGTGGCTGTGGCCGTGGCCAGTACTCCGTGGGTATaGCCCAGTTCCAGGTCATGGTTCATGGCTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: AVAVAVASTPWV*PSSRSWFMASK Trigger: CTTTGAAGCCATGAACCATGACCTGGAACTGGGTCATACCCACGGAGTACTGGCCACGGCCACAGCCACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS CCA 72 bp | AGGGACGCACAGAGCGTACCACGAACGCTAGTAATGTaGTCAGCAGCACGAAGGACCAACCCAGTGCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RDAQSVPRTLVM*SAARRTNPVPE Trigger: CTCAGGCACTGGGTTGGTCCTTCGTGCTGCTGACCACATTACTAGCGTTCGTGGTACGCTCTGTGCGTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS TCA 72 bp | TGTAGACCACGTTGTAGCCGGGTAAGCAGGGGCAGTTaGAGTCAAAGGCAGAATACATCTGCGCACTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: CRPRCSRVSRGS*SQRQNTSAHWP Trigger: TGGCCAGTGCGCAGATGTATTCTGCCTTTGACTTCAACTGCCCCTGCTTACCCGGCTACAACGTGGTCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS CAA 72 bp | GCGGGGCGCTTCCACTCTTCAGCTAGCATGGATATGTaGTTGTTCATGACCAGACCAAGCAGGAAGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: AGRFHSSASMDM*LFMTRPSRKST Trigger: GGTGCTCTTCCTGCTTGGTCTGGTCATGAACAACAACATATCCATGCTAGCTGAAGAGTGGAAGCGCCCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS TCA 72 bp | TCCACTCTTCAGCTAGCATGGATATGTTGTTGTTCATaGCCAGACCAAGCAGGAAGAGCACCAGGGGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: STLQLAWICCCS*PDQAGRAPGEA Trigger: CGCCTCCCCTGGTGCTCTTCCTGCTTGGTCTGGTCATGAACAACAACATATCCATGCTAGCTGAAGAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS CAA 72 bp | GGGCGCTTCCACTCTTCAGCTAGCATGGATATGTTGTaGTTCATGACCAGACCAAGCAGGAAGAGCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: GRFHSSASMDML*FMTRPSRKSTR Trigger: CCTGGTGCTCTTCCTGCTTGGTCTGGTCATGAACAACAACATATCCATGCTAGCTGAAGAGTGGAAGCGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS CCA 72 bp | TTGTGCCAGCTTGTGAGTAGCCTATTCATGGTGCCTTaGTCAGTGATGCCACGCAACTTCTCCCTCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LCQLVSSLFMVP*SVMPRNFSLSS Trigger: AGAAGAGAGGGAGAAGTTGCGTGGCATCACTGACCAAGGCACCATGAATAGGCTACTCACAAGCTGGCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS GCA 72 bp | AACTGCTGGATACATACCTTAGCAAAGGCTTTGGCATaGTCTGTGCATGTCTCATCGAAGAGCTTGCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: NCWIHTLAKALA*SVHVSSKSLRS Trigger: TGAGCGCAAGCTCTTCGATGAGACATGCACAGAGCATGCCAAAGCCTTTGCTAAGGTATGTATCCAGCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS GCA 72 bp | CCCAGTTCCAGGTCATGGTTCATGGCTTCAAAGAACTaGTGGATACATACCTTAGCAAAGGCTTTGGCATGC | + |
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Preference number: 6 (lower is better) Translates to: PSSRSWFMASKN*WIHTLAKALAC Trigger: GCATGCCAAAGCCTTTGCTAAGGTATGTATCCAGCAGTTCTTTGAAGCCATGAACCATGACCTGGAACTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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| CDS CCA 72 bp | AGTTCCAGGTCATGGTTCATGGCTTCAAAGAACTGCTaGATACATACCTTAGCAAAGGCTTTGGCATGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSRSWFMASKNC*IHTLAKALACS Trigger: AGAGCATGCCAAAGCCTTTGCTAAGGTATGTATCCAGCAGTTCTTTGAAGCCATGAACCATGACCTGGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111813.3 |
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