Pregenerated sensors for CALCRL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059588Ensembl transcript IDs: ENSMUST00000074262.9, ENSMUST00000099944.4
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCAGTGTGGGTGAGAGTGTGCACAGACTTCCATCTCTGAGGGCATaGAGTGCTGTGCAGGTTCCAGAACATGTCAGCTCCTGGGAGTTG | + |
|
Preference number: 1 (lower is better) Translates to: VSVGESVHRLPSLRA*SAVQVPEHVSSWEL Trigger: CAACTCCCAGGAGCTGACATGTTCTGGAACCTGCACAGCACTGCATGCCCTCAGAGATGGAAGTCTGTGCACACTCTCACCCACACTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR GCA 90 bp | TCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTAGTGATTCAGAGTaGATATACCACAGGATACAACAATATGTAGCAGCAACTAAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: SLSLSLSLSLSSDSE*IYHRIQQYVAATKK Trigger: CTTCTTAGTTGCTGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099944.4 |
||
| 3UTR TCA 90 bp | GAGAGAGGGTTGTTAAACATTTATCCATACAATTCCCATTTCATTTaGGGGCTTTCTTCATGGTATTCCAGAAATCCATTTGCTGGCTAT | + |
|
Preference number: 1 (lower is better) Translates to: ERGLLNIYPYNSHFI*GLSSWYSRNPFAGY Trigger: ATAGCCAGCAAATGGATTTCTGGAATACCATGAAGAAAGCCCTCAAATGAAATGGGAATTGTATGGATAAATGTTTAACAACCCTCTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR CCA 90 bp | AGATTCCAGAAAACTGATTTCCTCCTATTCTTGCCGAGAGAGAGAGAGAGAGAGGAGTTCTGGTCAGTGTaGGTGAGAGTGTGCACAGAC | + |
|
Preference number: 2 (lower is better) Translates to: RFQKTDFLLFLPREREREEFWSV*VRVCTD Trigger: GTCTGTGCACACTCTCACCCACACTGACCAGAACTC...CTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTCCCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCATCTGGTCAGTGTGGGTaGGAGTGTGCACAGACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: CLPSDSECIYHRIQQYVASGQCG*ECAQTS Trigger: GGAAGTCTGTGCACACTCTCACCCACACTGACCAGA...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGGGAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTCCCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCAGGGCATGCAGTGCTGTaGAGGTTCCAGAACATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: CLPSDSECIYHRIQQYVAGHAVL*RFQNMS Trigger: TGACATGTTCTGGAACCTGCACAGCACTGCATGCCC...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGGGAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTCTCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCAGGGCATGCAGTGCTGTaGAGGTTCCAGAACATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SLSSDSECIYHRIQQYVAGHAVL*RFQNMS Trigger: TGACATGTTCTGGAACCTGCACAGCACTGCATGCCC...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGAGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099944.4 |
||
| 3UTR-3UTR GCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATTCTGAGGGCATGCAGTaGTGTGCAGGTTCCAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDSEGMQ*CAGSRT Trigger: TGTTCTGGAACCTGCACAGCACTGCATGCCCTCAGA...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTCCCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCAAGAAGAGCAGAGTTCTaGTCAGTGTGGGTGAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: CLPSDSECIYHRIQQYVARRAEF*SVWVRV Trigger: CACTCTCACCCACACTGACCAGAACTCTGCTCTTCT...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGGGAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAATCTGAGGGCATGCAGTaGTGTGCAGGTTCCAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: SCHQIGICHIGSSMSAHQSEGMQ*CAGSRT Trigger: TGTTCTGGAACCTGCACAGCACTGCATGCCCTCAGA...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR TCA 90 bp | AGATTCCAGAAAACTGATTTCCTCCTATTCTTGCCGAGAGAGAGAGAGAGAGAGCAATTACACATTCAGTaGTGTCAGGTTGGTAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: RFQKTDFLLFLPREREREQLHIQ*CQVGNL Trigger: CAAGTTACCAACCTGACATCACTGAATGTGTAATTG...CTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| 3UTR-3UTR GCA 90 bp | AGATTCCAGAAAACTGATTTCCTCCTATTCTTGCCGAGAGAGAGAGAGAGAGAGAGCCCATGGGAATTCTaGTCAGTTGCTTTTCTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: RFQKTDFLLFLPRERERESPWEF*SVAFLK Trigger: TTTAAGAAAAGCAACTGAGCAGAATTCCCATGGGCT...CTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| 3UTR-3UTR TCA 90 bp | AGATTCCAGAAAACTGATTTCCTCCTATTCTTGCCGAGAGAGAGAGAGAGAGAGAATTCCCATTTCATTTaGGGGCTTTCTTCATGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: RFQKTDFLLFLPRERERENSHFI*GLSSWY Trigger: ATACCATGAAGAAAGCCCTCAAATGAAATGGGAATT...CTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| 3UTR-3UTR TCA 90 bp | AGATTCCAGAAAACTGATTTCCTCCTATTCTTGCCGAGAGAGAGAGAGAGAGAGTTCACTATCACCAAATaGCAAAAGGATGAGGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: RFQKTDFLLFLPREREREFTITK*QKDEEF Trigger: AAACTCCTCATCCTTTTGTCATTTGGTGATAGTGAA...CTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| 3UTR-3UTR GCA 90 bp | GTTACTGGCCAACAATATAAATTGAGGCTTTTCTCCCCCATAGAGAGAGGGTTGTTCCAGAAATCCATTTaGTGGCTATCCAATCTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: VTGQQYKLRLFSPIERGLFQKSI*WLSNLL Trigger: CAAAAGATTGGATAGCCAGCAAATGGATTTCTGGAA...CAACCCTCTCTCTATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCCAGTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTCCCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCAGAACATGTCAGCTCCTaGGAGTTGTTTGTGCTTATT | + |
|
Preference number: 2 (lower is better) Translates to: CLPSDSECIYHRIQQYVAEHVSS*ELFVLI Trigger: AATAAGCACAAACAACTCCCAGGAGCTGACATGTTC...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGGGAGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATCAATTACACATTCAGTaGTGTCAGGTTGGTAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDQLHIQ*CQVGNL Trigger: CAAGTTACCAACCTGACATCACTGAATGTGTAATTG...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR TCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATACACTTCATCCTCAATaGGTGGTAAGTTCAAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDTLHPQ*VVSSSL Trigger: AAGACTTGAACTTACCACTCATTGAGGATGAAGTGT...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTCCCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCATTCCAGAAATCCATTTaGTGGCTATCCAATCTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: CLPSDSECIYHRIQQYVAFQKSI*WLSNLL Trigger: CAAAAGATTGGATAGCCAGCAAATGGATTTCTGGAA...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGGGAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATCAGAAATCCATTTGCTaGCTATCCAATCTTTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDQKSIC*LSNLLA Trigger: AGCCAAAAGATTGGATAGCCAGCAAATGGATTTCTG...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR CCA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAAGAACATGTCAGCTCCTaGGAGTTGTTTGTGCTTATT | + |
|
Preference number: 2 (lower is better) Translates to: SCHQIGICHIGSSMSAHQEHVSS*ELFVLI Trigger: AATAAGCACAAACAACTCCCAGGAGCTGACATGTTC...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR CAA 90 bp | CCCATTTCATTTGAGGGCTTTCTTCATGGTATTCCAGAAATCCATTaGCTGGCTATCCAATCTTTTGGCTATAAAATCATAGGTTCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: PISFEGFLHGIPEIH*LAIQSFGYKIIGSS Trigger: ACTTGAACCTATGATTTTATAGCCAAAAGATTGGATAGCCAGCAAATGGATTTCTGGAATACCATGAAGAAAGCCCTCAAATGAAATGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR CAA 90 bp | AGAGAGAGGGTTGTTAAACATTTATCCATACAATTCCCATTTCATTaGAGGGCTTTCTTCATGGTATTCCAGAAATCCATTTGCTGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: RERVVKHLSIQFPFH*RAFFMVFQKSICWL Trigger: TAGCCAGCAAATGGATTTCTGGAATACCATGAAGAAAGCCCTCAAATGAAATGGGAATTGTATGGATAAATGTTTAACAACCCTCTCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTCTCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCAAATTCCCATTTCATTTaGGGGCTTTCTTCATGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: SLSSDSECIYHRIQQYVANSHFI*GLSSWY Trigger: ATACCATGAAGAAAGCCCTCAAATGAAATGGGAATT...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGAGAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099944.4 |
||
| 3UTR-3UTR TCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATTCCACAGTAGTCTACTaGAATACTGAAACAGTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDSTVVY*NTETVL Trigger: TAACACTGTTTCAGTATTTCAGTAGACTACTGTGGA...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTCTCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCACCTGGGAGTTGTTTGTaGTTATTTTCTTTCCAATTA | + |
|
Preference number: 2 (lower is better) Translates to: SLSSDSECIYHRIQQYVAPGSCL*LFSFQL Trigger: TAATTGGAAAGAAAATAAGCACAAACAACTCCCAGG...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGAGAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099944.4 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACAGCCCATGGGAATTCTaGTCAGTTGCTTTTCTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNSPWEF*SVAFLK Trigger: TTTAAGAAAAGCAACTGAGCAGAATTCCCATGGGCT...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACCCTAGTGATTCAGAGTaGATATACCACAGGATACAA | + |
|
Preference number: 2 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNPSDSE*IYHRIQ Trigger: TTGTATCCTGTGGTATATGCACTCTGAATCACTAGG...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| 3UTR-3UTR CCA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACCAGAAATCCATTTGCTaGCTATCCAATCTTTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNQKSIC*LSNLLA Trigger: AGCCAAAAGATTGGATAGCCAGCAAATGGATTTCTG...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR CCA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAAGGGTTAAAGTGTTTCTaGACAAACCATTCACTATCA | + |
|
Preference number: 2 (lower is better) Translates to: SCHQIGICHIGSSMSAHQGLKCF*TNHSLS Trigger: TGATAGTGAATGGTTTGTCCAGAAACACTTTAACCC...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR CCA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACGGGTTAAAGTGTTTCTaGACAAACCATTCACTATCA | + |
|
Preference number: 2 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNGLKCF*TNHSLS Trigger: TGATAGTGAATGGTTTGTCCAGAAACACTTTAACCC...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR GCA 72 bp | GAGTGTGCACAGACTTCCATCTCTGAGGGCATGCAGTaGTGTGCAGGTTCCAGAACATGTCAGCTCCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ECAQTSISEGMQ*CAGSRTCQLLG Trigger: TCCCAGGAGCTGACATGTTCTGGAACCTGCACAGCACTGCATGCCCTCAGAGATGGAAGTCTGTGCACACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR GCA 72 bp | GGTGAGAGTGTGCACAGACTTCCATCTCTGAGGGCATaGAGTGCTGTGCAGGTTCCAGAACATGTCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GESVHRLPSLRA*SAVQVPEHVSS Trigger: GGAGCTGACATGTTCTGGAACCTGCACAGCACTGCATGCCCTCAGAGATGGAAGTCTGTGCACACTCTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR GCA 72 bp | TTTACAGATTCCAGAAAACTGATTTCCTCCTATTCTTaGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: FTDSRKLISSYS*RERERERERER Trigger: TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTACTGGCCAACAATATAAATTGAGGCTTTTCTCCCCCATAGAGAGAGGGTTGCAATTCCCATTTCATTaGAGGGCTTTCTTCATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: VTGQQYKLRLFSPIERGLQFPFH*RAFFMV Trigger: TACCATGAAGAAAGCCCTCAAATGAAATGGGAATTG...CAACCCTCTCTCTATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCCAGTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR GCA 72 bp | CTTTCTCTCTCTCTCTCTCTCTCTAGTGATTCAGAGTaGATATACCACAGGATACAACAATATGTAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSLSLSLSSDSE*IYHRIQQYVAA Trigger: TGCTGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGAGAGAGAGAGAGAGAGAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099944.4 |
||
| 3UTR-3UTR CAA 90 bp | GTTACTGGCCAACAATATAAATTGAGGCTTTTCTCCCCCATAGAGAGAGGGTTGATTCCAGAAATCCATTaGCTGGCTATCCAATCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VTGQQYKLRLFSPIERGLIPEIH*LAIQSF Trigger: AAAAGATTGGATAGCCAGCAAATGGATTTCTGGAAT...CAACCCTCTCTCTATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCCAGTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTCCCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCACCCATAGAGAGAGGGTaGTTAAACATTTATCCATAC | + |
|
Preference number: 3 (lower is better) Translates to: CLPSDSECIYHRIQQYVAPIERG*LNIYPY Trigger: GTATGGATAAATGTTTAACAACCCTCTCTCTATGGG...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGGGAGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATGCTCCTGGGAGTTGTTaGTGCTTATTTTCTTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDAPGSC*CLFSFQ Trigger: TTGGAAAGAAAATAAGCACAAACAACTCCCAGGAGC...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR GCA 72 bp | CTTTATTTGCTGCAAGAATTTTGTGAGGAATTCAATTaGTCTATAGTCCAGGGAGGATGCGTGAAAGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LYLLQEFCEEFN*SIVQGGCVKVS Trigger: ACTCACTTTCACGCATCCTCCCTGGACTATAGAGCAATTGAATTCCTCACAAAATTCTTGCAGCAAATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTCTCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCACAATTCCCATTTCATTaGAGGGCTTTCTTCATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SLSSDSECIYHRIQQYVAQFPFH*RAFFMV Trigger: TACCATGAAGAAAGCCCTCAAATGAAATGGGAATTG...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGAGAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099944.4 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAAGGCCAACAATATAAATaGAGGCTTTTCTCCCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: SCHQIGICHIGSSMSAHQGQQYK*RLFSPI Trigger: TATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCC...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR CAA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATTTGGAATATGTCATATaGGAAGCAGTATGTCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDLEYVI*EAVCQH Trigger: GTGCTGACATACTGCTTCCAATATGACATATTCCAA...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACGGCCAACAATATAAATaGAGGCTTTTCTCCCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNGQQYK*RLFSPI Trigger: TATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCC...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACGCTCCTGGGAGTTGTTaGTGCTTATTTTCTTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNAPGSC*CLFSFQ Trigger: TTGGAAAGAAAATAAGCACAAACAACTCCCAGGAGC...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACTGTCAGGTTGGTAACTaGAAATCAGTTATGGTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNCQVGN*KSVMVG Trigger: TCCTACCATAACTGATTTCAAGTTACCAACCTGACA...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACTTGGAATATGTCATATaGGAAGCAGTATGTCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNLEYVI*EAVCQH Trigger: GTGCTGACATACTGCTTCCAATATGACATATTCCAA...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACATTCCAGAAATCCATTaGCTGGCTATCCAATCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNIPEIH*LAIQSF Trigger: AAAAGATTGGATAGCCAGCAAATGGATTTCTGGAAT...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR CCA 72 bp | TTGAATGAGTTGTCATCAAATTGGAATATGTCATATTaGAAGCAGTATGTCAGCACACCAAATATATCATGC | + |
|
Preference number: 3 (lower is better) Translates to: LNELSSNWNMSY*KQYVSTPNISC Trigger: GCATGATATATTTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACTCATTCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR GCA 90 bp | AGATTCCAGAAAACTGATTTCCTCCTATTCTTGCCGAGAGAGAGAGAGAGAGAGGTCATACACCTCCTCTaGAACCTTTCCTTCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RFQKTDFLLFLPREREREVIHLL*NLSFRP Trigger: CGGCCTGAAGGAAAGGTTGCAGAGGAGGTGTATGAC...CTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTCCCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCAGTGGCCACTAAGGCCTaGTTATTGGCCACTGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLPSDSECIYHRIQQYVAVATKA*LLATAV Trigger: CACGGCAGTGGCCAATAACCAGGCCTTAGTGGCCAC...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGGGAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR CCA 90 bp | AGATTCCAGAAAACTGATTTCCTCCTATTCTTGCCGAGAGAGAGAGAGAGAGAGACAAGCTTCTGGCAATaGCGTGGATGCAGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RFQKTDFLLFLPRERERETSFWQ*RGCRQE Trigger: TTCCTGCCTGCATCCACGCCATTGCCAGAAGCTTGT...CTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR TCA 90 bp | TGTCTCCCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCAAGGGCAGTACTGCATTaGTTCCGTCCCTGCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLPSDSECIYHRIQQYVARAVLH*FRPCCN Trigger: GTTGCAGCAGGGACGGAATCAATGCAGTACTGCCCT...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGGGAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR TCA 90 bp | AGATTCCAGAAAACTGATTTCCTCCTATTCTTGCCGAGAGAGAGAGAGAGAGAGGAGGAGATGAGTGTCTaGGCTGATCCAGCAATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RFQKTDFLLFLPREREREEEMSV*ADPAIV Trigger: GACAATTGCTGGATCAGCTCAGACACTCATCTCCTC...CTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR GCA 90 bp | AGATTCCAGAAAACTGATTTCCTCCTATTCTTGCCGAGAGAGAGAGAGAGAGAGGCAGTAAAGGCCTTCTaGTTGTTGAATGGGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RFQKTDFLLFLPREREREAVKAF*LLNGVL Trigger: CAGGACCCCATTCAACAAGCAGAAGGCCTTTACTGC...CTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR GCA 90 bp | AGATTCCAGAAAACTGATTTCCTCCTATTCTTGCCGAGAGAGAGAGAGAGAGAGTACCACATCAAGTGCTaGTTCTCCGCAAACACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RFQKTDFLLFLPREREREYHIKC*FSANTA Trigger: GGCTGTGTTTGCGGAGAAGCAGCACTTGATGTGGTA...CTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR CCA 90 bp | GTTACTGGCCAACAATATAAATTGAGGCTTTTCTCCCCCATAGAGAGAGGGTTGACTCCCAAGTCTGTTTaGTTCACGCCTTCTTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: VTGQQYKLRLFSPIERGLTPKSV*FTPSSD Trigger: GTCGGAAGAAGGCGTGAACCAAACAGACTTGGGAGT...CAACCCTCTCTCTATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCCAGTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR TCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATAGGGCAGTACTGCATTaGTTCCGTCCCTGCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDRAVLH*FRPCCN Trigger: GTTGCAGCAGGGACGGAATCAATGCAGTACTGCCCT...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR TCA 90 bp | GTTACTGGCCAACAATATAAATTGAGGCTTTTCTCCCCCATAGAGAGAGGGTTGGCCACCAAAAGACCCTaGAAGTGCATCAAAATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTGQQYKLRLFSPIERGLATKRP*KCIKMC Trigger: GCACATTTTGATGCACTTTCAGGGTCTTTTGGTGGC...CAACCCTCTCTCTATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCCAGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR TCA 90 bp | AGATTCCAGAAAACTGATTTCCTCCTATTCTTGCCGAGAGAGAGAGAGAGAGAGACCCTTGCATGTCACTaGTTGTTGACACTGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RFQKTDFLLFLPRERERETLACH*LLTLCR Trigger: CCTACACAGTGTCAACAATCAGTGACATGCAAGGGT...CTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR GCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATTGGCAATGGCGTGGATaGAGGCAGGAAGCAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDWQWRG*RQEAEE Trigger: TTCCTCTGCTTCCTGCCTGCATCCACGCCATTGCCA...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR GCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATCTGTGTAGGATGCACTaGGGAGAGCATCAGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDLCRMH*GEHQSG Trigger: CCCACTCTGATGCTCTCCGCAGTGCATCCTACACAG...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | AGATTCCAGAAAACTGATTTCCTCCTATTCTTGCCGAGAGAGAGAGAGAGAGAGAGCTCACAGGATTTGTaGCCACTAAGGCCTGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RFQKTDFLLFLPRERERESSQDL*PLRPGY Trigger: ATAACCAGGCCTTAGTGGCCACAAATCCTGTGAGCT...CTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR CCA 90 bp | GTTACTGGCCAACAATATAAATTGAGGCTTTTCTCCCCCATAGAGAGAGGGTTGAGCTCACAGGATTTGTaGCCACTAAGGCCTGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VTGQQYKLRLFSPIERGLSSQDL*PLRPGY Trigger: ATAACCAGGCCTTAGTGGCCACAAATCCTGTGAGCT...CAACCCTCTCTCTATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCCAGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATCTTCTGGCAATGGCGTaGATGCAGGCAGGAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDLLAMA*MQAGSR Trigger: TCTGCTTCCTGCCTGCATCCACGCCATTGCCAGAAG...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | GTTACTGGCCAACAATATAAATTGAGGCTTTTCTCCCCCATAGAGAGAGGGTTGTGTAATACAAGCTTCTaGCAATGGCGTGGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTGQQYKLRLFSPIERGLCNTSF*QWRGCR Trigger: CCTGCATCCACGCCATTGCCAGAAGCTTGTATTACA...CAACCCTCTCTCTATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCCAGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR TCA 90 bp | GTTACTGGCCAACAATATAAATTGAGGCTTTTCTCCCCCATAGAGAGAGGGTTGGAATGGGGTCCTGCATaGTCTTCTGGTAACATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VTGQQYKLRLFSPIERGLEWGPA*SSGNIH Trigger: ATGAATGTTACCAGAAGATCATGCAGGACCCCATTC...CAACCCTCTCTCTATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCCAGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR TCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATAGGCCTTCTGCTTGTTaGATGGGGTCCTGCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDRPSAC*MGSCMI Trigger: GATCATGCAGGACCCCATTCAACAAGCAGAAGGCCT...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR TCA 90 bp | GTTACTGGCCAACAATATAAATTGAGGCTTTTCTCCCCCATAGAGAGAGGGTTGGGTTTTTATGCAATGTaGTCCGTTGGCAACTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTGQQYKLRLFSPIERGLGFYAM*SVGNLG Trigger: GCCTAAGTTGCCAACGGATCACATTGCATAAAAACC...CAACCCTCTCTCTATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCCAGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACGTGGCCACTAAGGCCTaGTTATTGGCCACTGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNVATKA*LLATAV Trigger: CACGGCAGTGGCCAATAACCAGGCCTTAGTGGCCAC...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAACTTCTGGCAATGGCGTaGATGCAGGCAGGAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCHQIGICHIGSSMSAHQLLAMA*MQAGSR Trigger: TCTGCTTCCTGCCTGCATCCACGCCATTGCCAGAAG...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | AGATTCCAGAAAACTGATTTCCTCCTATTCTTGCCGAGAGAGAGAGAGAGAGAGCGGAGAGCATCAGAGTaGGAAAAGCCATTTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RFQKTDFLLFLPRERERERRASE*EKPFPN Trigger: ATTTGGAAATGGCTTTTCCCACTCTGATGCTCTCCG...CTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR CCA 90 bp | GTTACTGGCCAACAATATAAATTGAGGCTTTTCTCCCCCATAGAGAGAGGGTTGCGGAGAGCATCAGAGTaGGAAAAGCCATTTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VTGQQYKLRLFSPIERGLRRASE*EKPFPN Trigger: ATTTGGAAATGGCTTTTCCCACTCTGATGCTCTCCG...CAACCCTCTCTCTATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCCAGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATTCAGTGGGGCAGTCATaGCTGTACCCTTGCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDSVGQS*LYPCMS Trigger: TGACATGCAAGGGTACAGCCATGACTGCCCCACTGA...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR TCA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAAAGGCCTTCTGCTTGTTaGATGGGGTCCTGCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: SCHQIGICHIGSSMSAHQRPSAC*MGSCMI Trigger: GATCATGCAGGACCCCATTCAACAAGCAGAAGGCCT...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR GCA 90 bp | GTTACTGGCCAACAATATAAATTGAGGCTTTTCTCCCCCATAGAGAGAGGGTTGGTCTTCACTTTCTCATaGGTGCTGTTATTACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTGQQYKLRLFSPIERGLVFTFS*VLLLHR Trigger: CCTGTGTAATAACAGCACGCATGAGAAAGTGAAGAC...CAACCCTCTCTCTATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCCAGTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCATACCACATCAAGTGCTaGTTCTCCGCAAACACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSDSECIYHRIQQYVAYHIKC*FSANTA Trigger: GGCTGTGTTTGCGGAGAAGCAGCACTTGATGTGGTA...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGAGAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099944.4 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACTGGCAATGGCGTGGATaGAGGCAGGAAGCAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNWQWRG*RQEAEE Trigger: TTCCTCTGCTTCCTGCCTGCATCCACGCCATTGCCA...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCAACTCCCAAGTCTGTTTaGTTCACGCCTTCTTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSDSECIYHRIQQYVATPKSV*FTPSSD Trigger: GTCGGAAGAAGGCGTGAACCAAACAGACTTGGGAGT...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGAGAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAAACAAGCTTCTGGCAATaGCGTGGATGCAGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCHQIGICHIGSSMSAHQTSFWQ*RGCRQE Trigger: TTCCTGCCTGCATCCACGCCATTGCCAGAAGCTTGT...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR CAA 72 bp | ATTTACAGATTCCAGAAAACTGATTTCCTCCTATTCTaGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IYRFQKTDFLLF*PRERERERERE Trigger: CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCTGTAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR TCA 90 bp | TGTCTCCCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCAGGTTTTTATGCAATGTaGTCCGTTGGCAACTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLPSDSECIYHRIQQYVAGFYAM*SVGNLG Trigger: GCCTAAGTTGCCAACGGATCACATTGCATAAAAACC...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGGGAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR TCA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAAGAGGAGATGAGTGTCTaGGCTGATCCAGCAATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SCHQIGICHIGSSMSAHQEEMSV*ADPAIV Trigger: GACAATTGCTGGATCAGCTCAGACACTCATCTCCTC...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACGTCATACACCTCCTCTaGAACCTTTCCTTCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNVIHLL*NLSFRP Trigger: CGGCCTGAAGGAAAGGTTGCAGAGGAGGTGTATGAC...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | TGTCTCCCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCATGCAATGTGATCCGTTaGCAACTTAGGCTCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLPSDSECIYHRIQQYVACNVIR*QLRLLK Trigger: CTTCAAGAGCCTAAGTTGCCAACGGATCACATTGCA...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGGGAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCAGCCACTGCCGTGAGGTaGATGATTGTTACAATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSSDSECIYHRIQQYVAATAVR*MIVTIE Trigger: TTCGATTGTAACAATCATCCACCTCACGGCAGTGGC...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGAGAGAGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACTCAGTGGGGCAGTCATaGCTGTACCCTTGCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNSVGQS*LYPCMS Trigger: TGACATGCAAGGGTACAGCCATGACTGCCCCACTGA...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATCATTTAAGTGTTCAGTaGGGCAGTCATGGCTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDHLSVQ*GSHGCT Trigger: GGTACAGCCATGACTGCCCCACTGAACACTTAAATG...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR CAA 72 bp | GTTATGGTAGGAGTAGTTACTGGCCAACAATATAAATaGAGGCTTTTCTCCCCCATAGAGAGAGGGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VMVGVVTGQQYK*RLFSPIERGLL Trigger: TAACAACCCTCTCTCTATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCCAGTAACTACTCCTACCATAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR TCA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAAGCCACCAAAAGACCCTaGAAGTGCATCAAAATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCHQIGICHIGSSMSAHQATKRP*KCIKMC Trigger: GCACATTTTGATGCACTTTCAGGGTCTTTTGGTGGC...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR TCA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAAACCCTTGCATGTCACTaGTTGTTGACACTGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCHQIGICHIGSSMSAHQTLACH*LLTLCR Trigger: CCTACACAGTGTCAACAATCAGTGACATGCAAGGGT...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACGCAGTAAAGGCCTTCTaGTTGTTGAATGGGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNAVKAF*LLNGVL Trigger: CAGGACCCCATTCAACAAGCAGAAGGCCTTTACTGC...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATTGCAATGTGATCCGTTaGCAACTTAGGCTCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDCNVIR*QLRLLK Trigger: CTTCAAGAGCCTAAGTTGCCAACGGATCACATTGCA...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAAGCCACTGCCGTGAGGTaGATGATTGTTACAATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCHQIGICHIGSSMSAHQATAVR*MIVTIE Trigger: TTCGATTGTAACAATCATCCACCTCACGGCAGTGGC...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAATGTAATACAAGCTTCTaGCAATGGCGTGGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCHQIGICHIGSSMSAHQCNTSF*QWRGCR Trigger: CCTGCATCCACGCCATTGCCAGAAGCTTGTATTACA...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR GCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATTCACTTTCTCATGCGTaGTGTTATTACACAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDSLSHA*CYYTGC Trigger: ACACCCTGTGTAATAACAGCACGCATGAGAAAGTGA...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACCATTTAAGTGTTCAGTaGGGCAGTCATGGCTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNHLSVQ*GSHGCT Trigger: GGTACAGCCATGACTGCCCCACTGAACACTTAAATG...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR GCA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAAGTCTTCACTTTCTCATaGGTGCTGTTATTACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCHQIGICHIGSSMSAHQVFTFS*VLLLHR Trigger: CCTGTGTAATAACAGCACGCATGAGAAAGTGAAGAC...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAAAACCAGTGTCCATCTTaGTCACAGATCTTTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: SCHQIGICHIGSSMSAHQNQCPS*SQIFVT Trigger: GGTTACAAAGATCTGTGACCAAGATGGACACTGGTT...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | TGTCTCCCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCAAGATTGGATTCCACTTaGTGTGTAACTTTCAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLPSDSECIYHRIQQYVARLDST*CVTFNL Trigger: CAAGTTGAAAGTTACACACCAAGTGGAATCCAATCT...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGGGAGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR TCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATCTTTGTAACCTTCTCTaGAGGATCAAAATCCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDLCNLL*RIKILK Trigger: TTTCAGGATTTTGATCCTTCAGAGAAGGTTACAAAG...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCAAAGAACAGGTTTTTATaGAATGTGATCCGTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSSDSECIYHRIQQYVAKNRFL*NVIRWQ Trigger: TTGCCAACGGATCACATTGCATAAAAACCTGTTCTT...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGAGAGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099944.4 |
||
| CDS-3UTR GCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATAAAGCACAAATTCAATaGCAAGTAGTGGTACCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDKAQIQ*QVVVPR Trigger: TCTTGGTACCACTACTTGGCATTGAATTTGTGCTTT...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACAACCAGTGTCCATCTTaGTCACAGATCTTTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNNQCPS*SQIFVT Trigger: GGTTACAAAGATCTGTGACCAAGATGGACACTGGTT...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATTACACAGGGTGTAGTTaGTCCATGTTCTATTACTAT | + |
|
Preference number: 4 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDYTGCS*SMFYYY Trigger: ATAGTAATAGAACATGGACCAACTACACCCTGTGTA...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR TCA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACCTTTGTAACCTTCTCTaGAGGATCAAAATCCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNLCNLL*RIKILK Trigger: TTTCAGGATTTTGATCCTTCAGAGAAGGTTACAAAG...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACAAGAACAGGTTTTTATaGAATGTGATCCGTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNKNRFL*NVIRWQ Trigger: TTGCCAACGGATCACATTGCATAAAAACCTGTTCTT...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACAGATTGGATTCCACTTaGTGTGTAACTTTCAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNRLDST*CVTFNL Trigger: CAAGTTGAAAGTTACACACCAAGTGGAATCCAATCT...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR CAA 72 bp | TTTGAGGGCTTTCTTCATGGTATTCCAGAAATCCATTaGCTGGCTATCCAATCTTTTGGCTATAAAATCATA | + |
|
Preference number: 4 (lower is better) Translates to: FEGFLHGIPEIH*LAIQSFGYKII Trigger: TATGATTTTATAGCCAAAAGATTGGATAGCCAGCAAATGGATTTCTGGAATACCATGAAGAAAGCCCTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| 3UTR CAA 72 bp | TATAAATTGAGGCTTTTCTCCCCCATAGAGAGAGGGTaGTTAAACATTTATCCATACAATTCCCATTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: YKLRLFSPIERG*LNIYPYNSHFI Trigger: AATGAAATGGGAATTGTATGGATAAATGTTTAACAACCCTCTCTCTATGGGGGAGAAAAGCCTCAATTTATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS TCA 90 bp | TTAAGTGTTCAGTGGGGCAGTCATGGCTGTACCCTTGCATGTCACTaGTTGTTGACACTGTGTAGGATGCACTGCGGAGAGCATCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSVQWGSHGCTLACH*LLTLCRMHCGEHQS Trigger: ACTCTGATGCTCTCCGCAGTGCATCCTACACAGTGTCAACAATCAGTGACATGCAAGGGTACAGCCATGACTGCCCCACTGAACACTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CAA 90 bp | GTTACTGGCCAACAATATAAATTGAGGCTTTTCTCCCCCATAGAGAGAGGGTTGGTAAAGGCCTTCTGCTaGTTGAATGGGGTCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VTGQQYKLRLFSPIERGLVKAFC*LNGVLH Trigger: ATGCAGGACCCCATTCAACAAGCAGAAGGCCTTTAC...CAACCCTCTCTCTATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCCAGTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS CCA 90 bp | CTGTCTTCACTTTCTCATGCGTGCTGTTATTACACAGGGTGTAGTTaGTCCATGTTCTATTACTATCCGGATGCCGAAACCAGTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSSLSHACCYYTGCS*SMFYYYPDAETSVH Trigger: ATGGACACTGGTTTCGGCATCCGGATAGTAATAGAACATGGACCAACTACACCCTGTGTAATAACAGCACGCATGAGAAAGTGAAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CAA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAAACTAAGGCCTGGTTATaGGCCACTGCCGTGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCHQIGICHIGSSMSAHQTKAWL*ATAVRW Trigger: CCACCTCACGGCAGTGGCCAATAACCAGGCCTTAGT...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CAA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATTGCAGCTCACAGGATTaGTGGCCACTAAGGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDCSSQD*WPLRPG Trigger: ACCAGGCCTTAGTGGCCACAAATCCTGTGAGCTGCA...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCAGACTCCCAAGTCTGTTaGGTTCACGCCTTCTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SLSSDSECIYHRIQQYVADSQVC*VHAFFR Trigger: TCGGAAGAAGGCGTGAACCAAACAGACTTGGGAGTC...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGAGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099944.4 |
||
| CDS-3UTR CAA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACACTAAGGCCTGGTTATaGGCCACTGCCGTGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNTKAWL*ATAVRW Trigger: CCACCTCACGGCAGTGGCCAATAACCAGGCCTTAGT...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CAA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAAGACTCCCAAGTCTGTTaGGTTCACGCCTTCTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SCHQIGICHIGSSMSAHQDSQVC*VHAFFR Trigger: TCGGAAGAAGGCGTGAACCAAACAGACTTGGGAGTC...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CAA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATAAGGCCTTCTGCTTGTaGAATGGGGTCCTGCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDKAFCL*NGVLHD Trigger: ATCATGCAGGACCCCATTCAACAAGCAGAAGGCCTT...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CAA 90 bp | AGATTCCAGAAAACTGATTTCCTCCTATTCTTGCCGAGAGAGAGAGAGAGAGAGAAACCAGTGTCCATCTaGGTCACAGATCTTTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: RFQKTDFLLFLPREREREKPVSI*VTDLCN Trigger: GTTACAAAGATCTGTGACCAAGATGGACACTGGTTT...CTCTCTCTCTCTCTCTCTCGGCAAGAATAGGAGGAAATCAGTTTTCTGGAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR CAA 90 bp | ACTGAAGTCAATCTTGTTCTTCAGAAACTCCAAACCAAGCAATATTGGAAAAACTGCAGCTCACAGGATTaGTGGCCACTAAGGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TEVNLVLQKLQTKQYWKNCSSQD*WPLRPG Trigger: ACCAGGCCTTAGTGGCCACAAATCCTGTGAGCTGCA...GTTTTTCCAATATTGCTTGGTTTGGAGTTTCTGAAGAACAAGATTGACTTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CAA 90 bp | GTTACTGGCCAACAATATAAATTGAGGCTTTTCTCCCCCATAGAGAGAGGGTTGCTGGTAACATTCATATaGAGCCGTCATGATCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VTGQQYKLRLFSPIERGLLVTFI*SRHDLV Trigger: AACAAGATCATGACGGCTCAATATGAATGTTACCAG...CAACCCTCTCTCTATGGGGGAGAAAAGCCTCAATTTATATTGTTGGCCAGTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CAA 90 bp | TGTCTCCCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCACTGGTAACATTCATATaGAGCCGTCATGATCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CLPSDSECIYHRIQQYVALVTFI*SRHDLV Trigger: AACAAGATCATGACGGCTCAATATGAATGTTACCAG...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGGGAGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074262.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTCTAGTGATTCAGAGTGCATATACCACAGGATACAACAATATGTAGCAAAACCAGTGTCCATCTaGGTCACAGATCTTTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLSSDSECIYHRIQQYVAKPVSI*VTDLCN Trigger: GTTACAAAGATCTGTGACCAAGATGGACACTGGTTT...TGCTACATATTGTTGTATCCTGTGGTATATGCACTCTGAATCACTAGAGAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099944.4 |
||
| CDS-3UTR CAA 90 bp | CTTGACAGTTTGTTTAGAAGAATGCAGAATTACACGAACACTGTCAGCGAAGATTGTGTAACTTTCAACTaGGTGATGAGAACACGTACA | + |
|
Preference number: 5 (lower is better) Translates to: LDSLFRRMQNYTNTVSEDCVTFN*VMRTRT Trigger: TGTACGTGTTCTCATCACCAAGTTGAAAGTTACACA...ATCTTCGCTGACAGTGTTCGTGTAATTCTGCATTCTTCTAAACAAACTGTCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CAA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAATGTGTAACTTTCAACTaGGTGATGAGAACACGTACA | + |
|
Preference number: 5 (lower is better) Translates to: SCHQIGICHIGSSMSAHQCVTFN*VMRTRT Trigger: TGTACGTGTTCTCATCACCAAGTTGAAAGTTACACA...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS-3UTR CAA 90 bp | AGTTGTCATCAAATTGGAATATGTCATATTGGAAGCAGTATGTCAGCACACCAAGAGATTGGATTCCACTaGGTGTGTAACTTTCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: SCHQIGICHIGSSMSAHQEIGFH*VCNFQL Trigger: AAGTTGAAAGTTACACACCAAGTGGAATCCAATCTC...TTGGTGTGCTGACATACTGCTTCCAATATGACATATTCCAATTTGATGACAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS TCA 72 bp | CAGTGGGGCAGTCATGGCTGTACCCTTGCATGTCACTaGTTGTTGACACTGTGTAGGATGCACTGCGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QWGSHGCTLACH*LLTLCRMHCGE Trigger: CTCTCCGCAGTGCATCCTACACAGTGTCAACAATCAGTGACATGCAAGGGTACAGCCATGACTGCCCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS GCA 72 bp | CGTCATTCCAGCATAGCCATCCGTCCCAGGTCCTATTaGAGTAAAGGCCTTCTGCTTGTTGAATGGGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RHSSIAIRPRSY*SKGLLLVEWGP Trigger: AGGACCCCATTCAACAAGCAGAAGGCCTTTACTGCAATAGGACCTGGGACGGATGGCTATGCTGGAATGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS CCA 72 bp | TCCAGCAATTGTCGTTGTAATACAAGCTTCTGGCAATaGCGTGGATGCAGGCAGGAAGCAGAGGAAACCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSNCRCNTSFWQ*RGCRQEAEETP Trigger: GGGGGTTTCCTCTGCTTCCTGCCTGCATCCACGCCATTGCCAGAAGCTTGTATTACAACGACAATTGCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS GCA 72 bp | CCATCCGTCCCAGGTCCTATTGCAGTAAAGGCCTTCTaGTTGTTGAATGGGGTCCTGCATGATCTTCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: PSVPGPIAVKAF*LLNGVLHDLLV Trigger: TACCAGAAGATCATGCAGGACCCCATTCAACAAGCAGAAGGCCTTTACTGCAATAGGACCTGGGACGGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS CCA 72 bp | ACTTTGCAGCTCACAGGATTTGTGGCCACTAAGGCCTaGTTATTGGCCACTGCCGTGAGGTGGATGATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: TLQLTGFVATKA*LLATAVRWMIV Trigger: AACAATCATCCACCTCACGGCAGTGGCCAATAACCAGGCCTTAGTGGCCACAAATCCTGTGAGCTGCAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS CAA 72 bp | CAGCTCACAGGATTTGTGGCCACTAAGGCCTGGTTATaGGCCACTGCCGTGAGGTGGATGATTGTTACAATC | + |
|
Preference number: 6 (lower is better) Translates to: QLTGFVATKAWL*ATAVRWMIVTI Trigger: GATTGTAACAATCATCCACCTCACGGCAGTGGCCAATAACCAGGCCTTAGTGGCCACAAATCCTGTGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS CAA 72 bp | TCCGTCCCAGGTCCTATTGCAGTAAAGGCCTTCTGCTaGTTGAATGGGGTCCTGCATGATCTTCTGGTAACA | + |
|
Preference number: 6 (lower is better) Translates to: SVPGPIAVKAFC*LNGVLHDLLVT Trigger: TGTTACCAGAAGATCATGCAGGACCCCATTCAACAAGCAGAAGGCCTTTACTGCAATAGGACCTGGGACGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS GCA 72 bp | CATCAAAATGTGCATGACATAGTCATACACCTCCTCTaGAACCTTTCCTTCAGGCCGCCACGGAAAAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HQNVHDIVIHLL*NLSFRPPRKKH Trigger: GTGCTTTTTCCGTGGCGGCCTGAAGGAAAGGTTGCAGAGGAGGTGTATGACTATGTCATGCACATTTTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS CCA 72 bp | CTTTCTCATGCGTGCTGTTATTACACAGGGTGTAGTTaGTCCATGTTCTATTACTATCCGGATGCCGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: LSHACCYYTGCS*SMFYYYPDAET Trigger: GGTTTCGGCATCCGGATAGTAATAGAACATGGACCAACTACACCCTGTGTAATAACAGCACGCATGAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS CCA 72 bp | CTATTACTATCCGGATGCCGAAACCAGTGTCCATCTTaGTCACAGATCTTTGTAACCTTCTCTGAAGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLSGCRNQCPS*SQIFVTFSEGS Trigger: TGATCCTTCAGAGAAGGTTACAAAGATCTGTGACCAAGATGGACACTGGTTTCGGCATCCGGATAGTAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS CAA 90 bp | TGCTTGTTGAATGGGGTCCTGCATGATCTTCTGGTAACATTCATATaGAGCCGTCATGATCTTGTTTCTAGTGACTCCCAAGTCTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: CLLNGVLHDLLVTFI*SRHDLVSSDSQVCL Trigger: CAAACAGACTTGGGAGTCACTAGAAACAAGATCATGACGGCTCAATATGAATGTTACCAGAAGATCATGCAGGACCCCATTCAACAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS CAA 72 bp | AATGGGGTCCTGCATGATCTTCTGGTAACATTCATATaGAGCCGTCATGATCTTGTTTCTAGTGACTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: NGVLHDLLVTFI*SRHDLVSSDSQ Trigger: TTGGGAGTCACTAGAAACAAGATCATGACGGCTCAATATGAATGTTACCAGAAGATCATGCAGGACCCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS CAA 72 bp | AGCTCTTACGGCTTTCATGTAGAGATTGGATTCCACTaGGTGTGTAACTTTCAACTTGGTGATGAGAACACG | + |
|
Preference number: 6 (lower is better) Translates to: SSYGFHVEIGFH*VCNFQLGDENT Trigger: CGTGTTCTCATCACCAAGTTGAAAGTTACACACCAAGTGGAATCCAATCTCTACATGAAAGCCGTAAGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||
| CDS CAA 90 bp | GATGAGAGTAGCTCTTACGGCTTTCATGTAGAGATTGGATTCCACTaGGTGTGTAACTTTCAACTTGGTGATGAGAACACGTACAATATT | + |
|
Preference number: 6 (lower is better) Translates to: DESSSYGFHVEIGFH*VCNFQLGDENTYNI Trigger: AATATTGTACGTGTTCTCATCACCAAGTTGAAAGTTACACACCAAGTGGAATCCAATCTCTACATGAAAGCCGTAAGAGCTACTCTCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074262.9 ENSMUST00000099944.4 |
||