Pregenerated sensors for CALCOCO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023055Ensembl transcript IDs: ENSMUST00000023818.11, ENSMUST00000168112.8, ENSMUST00000171838.2, ENSMUST00000229231.2, ENSMUST00000229398.2, ENSMUST00000230035.2
Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCTCGGTGAGCTCCGAATGCTCCTGCCTGGCCGTGGCCAGAGCTaGCTCCAGCTCCTGCACTCGGCTCCTCAGCTCTGTCACCTGATC | + |
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Preference number: 1 (lower is better) Translates to: LLGELRMLLPGRGQS*LQLLHSAPQLCHLI Trigger: GATCAGGTGACAGAGCTGAGGAGCCGAGTGCAGGAGCTGGAGGCAGCTCTGGCCACGGCCAGGCAGGAGCATTCGGAGCTCACCGAGCAG 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR TCA 90 bp | GGGAGCCTGGCGTTCCTGTCAACCACACTGGTACCTTCTCTTGGCTaGGCCAAGAAGGGGGAGTTAGGGCGGGGCGCGGAGGCTGCTTGC | + |
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Preference number: 1 (lower is better) Translates to: GSLAFLSTTLVPSLG*AKKGELGRGAEAAC Trigger: GCAAGCAGCCTCCGCGCCCCGCCCTAACTCCCCCTTCTTGGCTCAGCCAAGAGAAGGTACCAGTGTGGTTGACAGGAACGCCAGGCTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| 3UTR TCA 90 bp | AGGGTGTCCTTCATGTGGGCCAGCTTGTCCTTCAGTCGCTGGACCTaGGCACCTTGCTCTTCTTGCCGGCTCTTGGCCTCCTCCAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: RVSFMWASLSFSRWT*APCSSCRLLASSSS Trigger: AGAGCTGGAGGAGGCCAAGAGCCGGCAAGAAGAGCAAGGTGCTCAGGTCCAGCGACTGAAGGACAAGCTGGCCCACATGAAGGACACCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR CCA 90 bp | TCATCCTCTAACTCCAGGATACGGGCCACATGGTCTCCCTGCTGCTaGCTCAGGATGTCCCTCTCTTCTGAGAGCTCCCCATGGGACCGG | + |
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Preference number: 1 (lower is better) Translates to: SSSNSRIRATWSPCC*LRMSLSSESSPWDR Trigger: CCGGTCCCATGGGGAGCTCTCAGAAGAGAGGGACATCCTGAGCCAGCAGCAGGGAGACCATGTGGCCCGTATCCTGGAGTTAGAGGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR GCA 90 bp | ATGTCATCCTCTAACTCCAGGATACGGGCCACATGGTCTCCCTGCTaGTGGCTCAGGATGTCCCTCTCTTCTGAGAGCTCCCCATGGGAC | + |
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Preference number: 1 (lower is better) Translates to: MSSSNSRIRATWSPC*WLRMSLSSESSPWD Trigger: GTCCCATGGGGAGCTCTCAGAAGAGAGGGACATCCTGAGCCAGCAGCAGGGAGACCATGTGGCCCGTATCCTGGAGTTAGAGGATGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR GCA 90 bp | TGGATGTCATCCTCTAACTCCAGGATACGGGCCACATGGTCTCCCTaGTGCTGGCTCAGGATGTCCCTCTCTTCTGAGAGCTCCCCATGG | + |
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Preference number: 1 (lower is better) Translates to: WMSSSNSRIRATWSP*CWLRMSLSSESSPW Trigger: CCATGGGGAGCTCTCAGAAGAGAGGGACATCCTGAGCCAGCAGCAGGGAGACCATGTGGCCCGTATCCTGGAGTTAGAGGATGACATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR CCA 90 bp | CCTTCAGTCGCTGGACCTGAGCACCTTGCTCTTCTTGCCGGCTCTTaGCCTCCTCCAGCTCTGTATTTAAGCAGCAGTTCTCCTCTCGGA | + |
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Preference number: 1 (lower is better) Translates to: PSVAGPEHLALLAGS*PPPALYLSSSSPLG Trigger: TCCGAGAGGAGAACTGCTGCTTAAATACAGAGCTGGAGGAGGCCAAGAGCCGGCAAGAAGAGCAAGGTGCTCAGGTCCAGCGACTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR CCA 90 bp | CTGTCCAGCTCCACCTCCTTCATCAGCACTTTGTCACTCATGGTCTaGATGTCATCCTCTAACTCCAGGATACGGGCCACATGGTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: LSSSTSFISTLSLMV*MSSSNSRIRATWSP Trigger: GGGAGACCATGTGGCCCGTATCCTGGAGTTAGAGGATGACATCCAGACCATGAGTGACAAAGTGCTGATGAAGGAGGTGGAGCTGGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR GCA 90 bp | GGGGACCTCAGGGAACACGACCCATGTGGTTCCTTGTTCCTAACATaGCATCCTGGTCACTCTCTGTTCAAGCCTCTCCTATGGCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: GDLREHDPCGSLFLT*HPGHSLFKPLLWLL Trigger: AAGAAGCCATAGGAGAGGCTTGAACAGAGAGTGACCAGGATGGCATGTTAGGAACAAGGAACCACATGGGTCGTGTTCCCTGAGGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| 3UTR CCA 90 bp | AAGTCAGGGATGAGCAACATCTCTAGCATAGCCAGACAGATGCTCTaGATGGCGGTCCTTCTCTCAGTCTCCATCCTCTTCCTCCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: KSGMSNISSIARQML*MAVLLSVSILFLPE Trigger: CTCTGGGAGGAAGAGGATGGAGACTGAGAGAAGGACCGCCATCCAGAGCATCTGTCTGGCTATGCTAGAGATGTTGCTCATCCCTGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| 3UTR GCA 90 bp | AAGCAGCAGTTCTCCTCTCGGACCGTTTGTAATTCAGCCTCACTCTaGTCCTTGTCTGCCTGGAATTCCTTCAGCTGTCTCAGGAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: KQQFSSRTVCNSASL*SLSAWNSFSCLRSF Trigger: GAAGCTCCTGAGACAGCTGAAGGAATTCCAGGCAGACAAGGAGCAGAGTGAGGCTGAATTACAAACGGTCCGAGAGGAGAACTGCTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR CCA 90 bp | TCTCGGACCGTTTGTAATTCAGCCTCACTCTGCTCCTTGTCTGCCTaGAATTCCTTCAGCTGTCTCAGGAGCTTCTCTTGTTCCCGTGTC | + |
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Preference number: 1 (lower is better) Translates to: SRTVCNSASLCSLSA*NSFSCLRSFSCSRV Trigger: GACACGGGAACAAGAGAAGCTCCTGAGACAGCTGAAGGAATTCCAGGCAGACAAGGAGCAGAGTGAGGCTGAATTACAAACGGTCCGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR CCA 90 bp | TTCCTAACATGCCATCCTGGTCACTCTCTGTTCAAGCCTCTCCTATaGCTTCTTCTGCTTAAAATATTCTCCAGATACCCAAGTCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: FLTCHPGHSLFKPLL*LLLLKIFSRYPSPL Trigger: GAGAGGACTTGGGTATCTGGAGAATATTTTAAGCAGAAGAAGCCATAGGAGAGGCTTGAACAGAGAGTGACCAGGATGGCATGTTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| 3UTR GCA 90 bp | CTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTaGTTGGGACAAAGACATCAGGATGGAAGATGGAGTTGTAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: LFRKVNSATASKTDC*LGQRHQDGRWSCKA Trigger: AGCCTTACAACTCCATCTTCCATCCTGATGTCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| 3UTR GCA 90 bp | AACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTaGTGCTTGGGACAAAGACATCAGGATGGAAGATGGAGTTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: NLFRKVNSATASKTD*CLGQRHQDGRWSCK Trigger: CTTACAACTCCATCTTCCATCCTGATGTCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| 3UTR-3UTR GCA 90 bp | AGAATGACAGCACTGGCCCTTTCTGCCCCAAGCCCCACACGCCAGGCAGAGTTGGCACCACCTGGTCCCTaGCCATACTGCAGGTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: RMTALALSAPSPTRQAELAPPGP*PYCRFP Trigger: GGGGAACCTGCAGTATGGGCAGGGACCAGGTGGTGC...CAACTCTGCCTGGCGTGTGGGGCTTGGGGCAGAAAGGGCCAGTGCTGTCATTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGGCTCTTGGCCTCCTCCAGCTCTGTATTTAAGCAGCAGTTCTCCTCTCGGAGGCCGTGGCCAGAGCTaGCTCCAGCTCCTGCACTCG | + |
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Preference number: 2 (lower is better) Translates to: AGSWPPPALYLSSSSPLGGRGQS*LQLLHS Trigger: CGAGTGCAGGAGCTGGAGGCAGCTCTGGCCACGGCC...TCCGAGAGGAGAACTGCTGCTTAAATACAGAGCTGGAGGAGGCCAAGAGCCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGATGTCCCTCTCTTCTGAGAGCTCCCCATGGGACCGGGAGAGCCCCTTGAGGTCATTCCGCTCCTaGTGGCTCTCATCCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LRMSLSSESSPWDRESPLRSFRS*WLSSSW Trigger: CCAGCTGGATGAGAGCCAGCAGGAGCGGAATGACCT...CAAGGGGCTCTCCCGGTCCCATGGGGAGCTCTCAGAAGAGAGGGACATCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCCATGGGACCGGGAGAGCCCCTTGTACTGCTCGGTGAGCTCCGAATGCTCTCACCAGCTCATCCATaGGCCTTGGCTCTCGGAACT | + |
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Preference number: 2 (lower is better) Translates to: LPMGPGEPLVLLGELRMLSPAHP*ALALGT Trigger: AGTTCCGAGAGCCAAGGCCCATGGATGAGCTGGTGA...GAGCATTCGGAGCTCACCGAGCAGTACAAGGGGCTCTCCCGGTCCCATGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR CAA 90 bp | CCAGGGGCTCAGACTTCAGGCAGCACTGCAGCTTCTGCTGCCTTCTaGACCCGGGGACCTCAGGGAACACGACCCATGTGGTTCCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: PGAQTSGSTAASAAF*TRGPQGTRPMWFLV Trigger: AACAAGGAACCACATGGGTCGTGTTCCCTGAGGTCCCCGGGTCAAGAAGGCAGCAGAAGCTGCAGTGCTGCCTGAAGTCTGAGCCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCATCCTCTAACTCCAGGATACGGGCCACATGGTCTCCCTGCTGCTGGCTCATCTGAGAGCTCCCCATaGGACCGGGAGAGCCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: CHPLTPGYGPHGLPAAGSSESSP*DRESPL Trigger: CAAGGGGCTCTCCCGGTCCCATGGGGAGCTCTCAGA...TGAGCCAGCAGCAGGGAGACCATGTGGCCCGTATCCTGGAGTTAGAGGATGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGGTACCTTCTCTTGGCTaGGCCAAGAAGGGGGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: GRENVKPPGVCGGSLAFLVPSLG*AKKGEL Trigger: TAACTCCCCCTTCTTGGCTCAGCCAAGAGAAGGTAC...CAGGAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTGCCTGGAATTCCTTCAGCTGTCTCAGGAGCTTCTCTTGTTCCCGTGTCAAGCTCCGAATGCTCCTaGCTGGCCGTGGCCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: CLPGIPSAVSGASLVPVSSSECS*LAVARA Trigger: AGCTCTGGCCACGGCCAGGCAGGAGCATTCGGAGCT...TGACACGGGAACAAGAGAAGCTCCTGAGACAGCTGAAGGAATTCCAGGCAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCAGAGAGAGAGAATGACAGCACTGGCCCTTTCTGCCCCAAGCCCCACACGTCCTGTCAACCACACTaGTACCTTCTCTTGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: PAERENDSTGPFCPKPHTSCQPH*YLLLAE Trigger: CTCAGCCAAGAGAAGGTACCAGTGTGGTTGACAGGA...CGTGTGGGGCTTGGGGCAGAAAGGGCCAGTGCTGTCATTCTCTCTCTCTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCACCTCCTTCATCAGCACTTTGTCACTCATGGTCTGGATGTCATCCTCGATGTCCCTCTCTTCTaGGAGCTCCCCATGGGACCG | + |
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Preference number: 2 (lower is better) Translates to: QLHLLHQHFVTHGLDVILDVPLF*ELPMGP Trigger: CGGTCCCATGGGGAGCTCTCAGAAGAGAGGGACATC...GAGGATGACATCCAGACCATGAGTGACAAAGTGCTGATGAAGGAGGTGGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTGCTGCCTAATGGGGCTGAAAATGAGTCTGACACTGTTCTTCATCTTCCTGTACCTACCTGGTGCCTaGGGAAGGGGAGGGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VCCLMGLKMSLTLFFIFLYLPGA*GRGGGR Trigger: CCTGCCCCCTCCCCTTCCCCAGGCACCAGGTAGGTA...CAGGAAGATGAAGAACAGTGTCAGACTCATTTTCAGCCCCATTAGGCAGCAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCGGACCGTTTGTAATTCAGCCTCACTCTGCTCCTTGTCTGCCTGGAATTAGGATACGGGCCACATaGTCTCCCTGCTGCTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: PLGPFVIQPHSAPCLPGIRIRAT*SPCCWL Trigger: GAGCCAGCAGCAGGGAGACCATGTGGCCCGTATCCT...AATTCCAGGCAGACAAGGAGCAGAGTGAGGCTGAATTACAAACGGTCCGAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR CAA 90 bp | CTCCTTGTCTGCCTGGAATTCCTTCAGCTGTCTCAGGAGCTTCTCTaGTTCCCGTGTCAGGGCCTTCACTGTGTCTCTAACCCTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LLVCLEFLQLSQELL*FPCQGLHCVSNPVQ Trigger: CTGGACAGGGTTAGAGACACAGTGAAGGCCCTGACACGGGAACAAGAGAAGCTCCTGAGACAGCTGAAGGAATTCCAGGCAGACAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTCCACCTCCTTCATCAGCACTTTGTCACTCATGGTCTGGATGTCATCCTCACATGGTCTCCCTGCTaGTGGCTCAGGATGTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: QLHLLHQHFVTHGLDVILTWSPC*WLRMSL Trigger: GAGGGACATCCTGAGCCAGCAGCAGGGAGACCATGT...GAGGATGACATCCAGACCATGAGTGACAAAGTGCTGATGAAGGAGGTGGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR-3UTR CCA 90 bp | GGACACCTGGGATCCCTTGTCCCCTATCCCTCACAGAAGGCACAAATACATTTTTTGAGGACTTCGGTGTaGGGTGGCAGGAGTTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: GHLGSLVPYPSQKAQIHFLRTSV*GGRSWL Trigger: AAGCCAACTCCTGCCACCCCACACCGAAGTCCTCAA...AAAATGTATTTGTGCCTTCTGTGAGGGATAGGGGACAAGGGATCCCAGGTGTCC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
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| 3UTR-3UTR CCA 90 bp | TCCACCTCCTTCATCAGCACTTTGTCACTCATGGTCTGGATGTCATCCTCTAACCTCATCCATGGGCCTTaGCTCTCGGAACTGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: STSFISTLSLMVWMSSSNLIHGP*LSELEG Trigger: CCCTTCCAGTTCCGAGAGCCAAGGCCCATGGATGAG...GTTAGAGGATGACATCCAGACCATGAGTGACAAAGTGCTGATGAAGGAGGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTCACTCATGGTCTGGATGTCATCCTCTAACTCCAGGATACGGGCCACATTCATTCCGCTCCTGCTaGCTCTCATCCAGCTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: LCHSWSGCHPLTPGYGPHSFRSC*LSSSWF Trigger: GAACCAGCTGGATGAGAGCCAGCAGGAGCGGAATGA...ATGTGGCCCGTATCCTGGAGTTAGAGGATGACATCCAGACCATGAGTGACAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGCACTTTGTCACTCATGGTCTGGATGTCATCCTCTAACTCCAGGATACGGGAACTGCAGCTTCAGCTaGATCAGGTCATTCCGCTCC | + |
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Preference number: 2 (lower is better) Translates to: SALCHSWSGCHPLTPGYGNCSFS*IRSFRS Trigger: GGAGCGGAATGACCTGATGCAGCTGAAGCTGCAGTT...CCCGTATCCTGGAGTTAGAGGATGACATCCAGACCATGAGTGACAAAGTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTGTTCCTAACATGCCATCCTGGTCACTCTCTGTTCAAGCCTCTCCTATGGGGAGCAGGACAATTTaGGCTCCACGGAAGATGAAG | + |
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Preference number: 2 (lower is better) Translates to: FLVPNMPSWSLSVQASPMGSRTI*APRKMK Trigger: CTTCATCTTCCGTGGAGCCCAAATTGTCCTGCTCCC...CATAGGAGAGGCTTGAACAGAGAGTGACCAGGATGGCATGTTAGGAACAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTGTCTGCCTGGAATTCCTTCAGCTGTCTCAGGAGCTTCTCTTGTTCCCGTGTTGTCACTCATGGTCTaGATGTCATCCTCTAACTCC | + |
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Preference number: 2 (lower is better) Translates to: PCLPGIPSAVSGASLVPVLSLMV*MSSSNS Trigger: GGAGTTAGAGGATGACATCCAGACCATGAGTGACAA...CACGGGAACAAGAGAAGCTCCTGAGACAGCTGAAGGAATTCCAGGCAGACAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGTGTGTGTAAGCATGAGACCAAACTaGATATATGTCTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: GVGFGASEGSDVCVCVCVSMRPN*IYVCVC Trigger: ACACACACAGACATATATGCAGTTTGGTCTCATGCT...TACACACACACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCTCTGTTCAAGCCTCTCCTATGGCTTCTTCTGCTTAAAATATTCTCCAGATCCCTCCATCTCCGTCTaGTGCCTAATGGGGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: TLCSSLSYGFFCLKYSPDPSISV*CLMGLK Trigger: TTTCAGCCCCATTAGGCAGCAGACGGAGATGGAGGG...ATCTGGAGAATATTTTAAGCAGAAGAAGCCATAGGAGAGGCTTGAACAGAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCTGGAGTTGTAAGGCTTaGGATGAAAGCAGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: SILVPLNLFRKVNSATASWSCKA*DESRVQ Trigger: CTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCA...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| 3UTR-3UTR CCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCTGGAGTTGTAAGGCTTaGGATGAAAGCAGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: NCGNNSIPARESHLHPGSWSCKA*DESRVQ Trigger: CTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCA...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| 3UTR CAA 90 bp | TTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTaGGGACAAAGACATCAGGATGGAAGATGGAGTTGTAAGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: FRKVNSATASKTDCC*GQRHQDGRWSCKAW Trigger: CCAAGCCTTACAACTCCATCTTCCATCCTGATGTCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGAGCAGGGTGCAGGCATaGTCTGTAGGAACAGAACAT | + |
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Preference number: 2 (lower is better) Translates to: ILVPLNLFRKVNSATASKSRVQA*SVGTEH Trigger: ATGTTCTGTTCCTACAGACCATGCCTGCACCCTGCT...CTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGTGGAGTTGTAAGGCTTaGGATGAAAGCAGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: ILVPLNLFRKVNSATASKWSCKA*DESRVQ Trigger: CTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCA...CTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGAAGCATGAGACCAAACTaGATATATGTCTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: RKVNSATASKTDCCLGQRSMRPN*IYVCVC Trigger: ACACACACAGACATATATGCAGTTTGGTCTCATGCT...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCAGCATGAGACCAAACTaGATATATGTCTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: PLNLFRKVNSATASKTDCSMRPN*IYVCVC Trigger: ACACACACAGACATATATGCAGTTTGGTCTCATGCT...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| 3UTR GCA 72 bp | AGCCCCTTGTACTGCTCGGTGAGCTCCGAATGCTCCTaGCTGGCCGTGGCCAGAGCTGCCTCCAGCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: SPLYCSVSSECS*LAVARAASSSC Trigger: GCAGGAGCTGGAGGCAGCTCTGGCCACGGCCAGGCAGGAGCATTCGGAGCTCACCGAGCAGTACAAGGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| 3UTR TCA 72 bp | GCGTTCCTGTCAACCACACTGGTACCTTCTCTTGGCTaGGCCAAGAAGGGGGAGTTAGGGCGGGGCGCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: AFLSTTLVPSLG*AKKGELGRGAE Trigger: CTCCGCGCCCCGCCCTAACTCCCCCTTCTTGGCTCAGCCAAGAGAAGGTACCAGTGTGGTTGACAGGAACGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| 3UTR GCA 72 bp | AGGGGCTCAGACTTCAGGCAGCACTGCAGCTTCTGCTaGCTTCTTGACCCGGGGACCTCAGGGAACACGACC | + |
|
Preference number: 3 (lower is better) Translates to: RGSDFRQHCSFC*LLDPGTSGNTT Trigger: GGTCGTGTTCCCTGAGGTCCCCGGGTCAAGAAGGCAGCAGAAGCTGCAGTGCTGCCTGAAGTCTGAGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| 3UTR CCA 72 bp | CCTGGCGTTCCTGTCAACCACACTGGTACCTTCTCTTaGCTGAGCCAAGAAGGGGGAGTTAGGGCGGGGCGC | + |
|
Preference number: 3 (lower is better) Translates to: PGVPVNHTGTFS*LSQEGGVRAGR Trigger: GCGCCCCGCCCTAACTCCCCCTTCTTGGCTCAGCCAAGAGAAGGTACCAGTGTGGTTGACAGGAACGCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| 3UTR TCA 72 bp | GGCCATGATGCTCTTTTCCCTGAGGCCCTGTCGGCCTaGCTAGGACTAGAGAGCCAGGCAGAAGGCACCACC | + |
|
Preference number: 3 (lower is better) Translates to: GHDALFPEALSA*LGLESQAEGTT Trigger: GGTGGTGCCTTCTGCCTGGCTCTCTAGTCCTAGTCAGGCCGACAGGGCCTCAGGGAAAAGAGCATCATGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTAACTCCAGGATACGGGCCACATGGTCTCCCTGCTGCTGGCTCAGGATGTGCTCATCCATGGGCCTaGGCTCTCGGAACTGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PLTPGYGPHGLPAAGSGCAHPWA*ALGTGR Trigger: CCTTCCAGTTCCGAGAGCCAAGGCCCATGGATGAGC...ACATCCTGAGCCAGCAGCAGGGAGACCATGTGGCCCGTATCCTGGAGTTAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
||
| 3UTR TCA 72 bp | TTCATGTGGGCCAGCTTGTCCTTCAGTCGCTGGACCTaGGCACCTTGCTCTTCTTGCCGGCTCTTGGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FMWASLSFSRWT*APCSSCRLLAS Trigger: GGAGGCCAAGAGCCGGCAAGAAGAGCAAGGTGCTCAGGTCCAGCGACTGAAGGACAAGCTGGCCCACATGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCACACTGGTACCTTCTCTaGGCTGAGCCAAGAAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RENVKPPGVCGGSLAFLSHWYLL*AEPRRG Trigger: CCCCCTTCTTGGCTCAGCCAAGAGAAGGTACCAGTG...TGACAGGAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| 3UTR GCA 72 bp | TCTAACTCCAGGATACGGGCCACATGGTCTCCCTGCTaGTGGCTCAGGATGTCCCTCTCTTCTGAGAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SNSRIRATWSPC*WLRMSLSSESS Trigger: GGAGCTCTCAGAAGAGAGGGACATCCTGAGCCAGCAGCAGGGAGACCATGTGGCCCGTATCCTGGAGTTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
||
| 3UTR TCA 72 bp | TCATTCCGCTCCTGCTGGCTCTCATCCAGCTGGTTCTaGAGCACGGTGGCCTTAGGGACAACCAACAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: SFRSCWLSSSWF*STVALGTTNRM Trigger: CATCCTGTTGGTTGTCCCTAAGGCCACCGTGCTTCAGAACCAGCTGGATGAGAGCCAGCAGGAGCGGAATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
||
| 3UTR CCA 72 bp | TTTGTGGAGGGAGCCTGGCGTTCCTGTCAACCACACTaGTACCTTCTCTTGGCTGAGCCAAGAAGGGGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FVEGAWRSCQPH*YLLLAEPRRGS Trigger: ACTCCCCCTTCTTGGCTCAGCCAAGAGAAGGTACCAGTGTGGTTGACAGGAACGCCAGGCTCCCTCCACAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAGTCAGGGATGAGCAACATCTCTAGCATAGCCAGACAGATGCTCTGGATGGAAGCCACCTGGGGTTaGTGGAGGGAGCCTGGCGTT | + |
|
Preference number: 3 (lower is better) Translates to: RKSGMSNISSIARQMLWMEATWG*WREPGV Trigger: AACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTC...CATCCAGAGCATCTGTCTGGCTATGCTAGAGATGTTGCTCATCCCTGACTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTCGGACCGTTTGTAATTCAGCCTCACTCTGCTCCTTGTCTGCCTGGAATTTCTCAGGAGCTTCTCTaGTTCCCGTGTCAGGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PLGPFVIQPHSAPCLPGISQELL*FPCQGL Trigger: AAGGCCCTGACACGGGAACAAGAGAAGCTCCTGAGA...AATTCCAGGCAGACAAGGAGCAGAGTGAGGCTGAATTACAAACGGTCCGAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
||
| 3UTR GCA 72 bp | AGGGAACACGACCCATGTGGTTCCTTGTTCCTAACATaGCATCCTGGTCACTCTCTGTTCAAGCCTCTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: REHDPCGSLFLT*HPGHSLFKPLL Trigger: TAGGAGAGGCTTGAACAGAGAGTGACCAGGATGGCATGTTAGGAACAAGGAACCACATGGGTCGTGTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| 3UTR CCA 72 bp | ATGAGCAACATCTCTAGCATAGCCAGACAGATGCTCTaGATGGCGGTCCTTCTCTCAGTCTCCATCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: MSNISSIARQML*MAVLLSVSILF Trigger: GAAGAGGATGGAGACTGAGAGAAGGACCGCCATCCAGAGCATCTGTCTGGCTATGCTAGAGATGTTGCTCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| 3UTR CCA 72 bp | CGACCCATGTGGTTCCTTGTTCCTAACATGCCATCCTaGTCACTCTCTGTTCAAGCCTCTCCTATGGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RPMWFLVPNMPS*SLSVQASPMAS Trigger: AGAAGCCATAGGAGAGGCTTGAACAGAGAGTGACCAGGATGGCATGTTAGGAACAAGGAACCACATGGGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| 3UTR CCA 72 bp | TCCACCTCCTTCATCAGCACTTTGTCACTCATGGTCTaGATGTCATCCTCTAACTCCAGGATACGGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: STSFISTLSLMV*MSSSNSRIRAT Trigger: TGTGGCCCGTATCCTGGAGTTAGAGGATGACATCCAGACCATGAGTGACAAAGTGCTGATGAAGGAGGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
||
| 3UTR CCA 72 bp | CAAAGACATCAGGATGGAAGATGGAGTTGTAAGGCTTaGGATGAAAGCAGGGTGCAGGCATGGTCTGTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QRHQDGRWSCKA*DESRVQAWSVG Trigger: TCCTACAGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCATCTTCCATCCTGATGTCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| 3UTR CCA 72 bp | GATTGCTGCTTGGGACAAAGACATCAGGATGGAAGATaGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DCCLGQRHQDGR*SCKAWDESRVQ Trigger: CTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCATCTTCCATCCTGATGTCTTTGTCCCAAGCAGCAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| 3UTR GCA 72 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTaGTGCTTGGGACAAAGACATCAGGATGGAAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: RKVNSATASKTD*CLGQRHQDGRW Trigger: CCATCTTCCATCCTGATGTCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| 3UTR CCA 72 bp | TGCCATCCTGGTCACTCTCTGTTCAAGCCTCTCCTATaGCTTCTTCTGCTTAAAATATTCTCCAGATACCCA | + |
|
Preference number: 3 (lower is better) Translates to: CHPGHSLFKPLL*LLLLKIFSRYP Trigger: TGGGTATCTGGAGAATATTTTAAGCAGAAGAAGCCATAGGAGAGGCTTGAACAGAGAGTGACCAGGATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| 3UTR GCA 72 bp | GTCACTCTCTGTTCAAGCCTCTCCTATGGCTTCTTCTaGTTAAAATATTCTCCAGATACCCAAGTCCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VTLCSSLSYGFF*LKYSPDTQVLS Trigger: AGAGAGGACTTGGGTATCTGGAGAATATTTTAAGCAGAAGAAGCCATAGGAGAGGCTTGAACAGAGAGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| 3UTR GCA 72 bp | TCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTaGTTCCAAGACAGATTGCTGCTTGGGACAAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: SSKPFQKSKLSH*FQDRLLLGTKT Trigger: TGTCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTCTTGGCTGAGCCAAGAAGGGGGAGTTAGGGCGGGGCGCGGAGGCTGCGTTGGGCTCCTGGTTTaGGCAGGTAGCTGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TFSWLSQEGGVRAGRGGCVGLLV*AGSWLG Trigger: TCCAAGCCAGCTACCTGCCCAAACCAGGAGCCCAAC...GCAGCCTCCGCGCCCCGCCCTAACTCCCCCTTCTTGGCTCAGCCAAGAGAAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR GCA 90 bp | GGCGTTCCTGTCAACCACACTGGTACCTTCTCTTGGCTGAGCCAAGAAGGGGGAGGCCGTGGCCAGAGCTaGCTCCAGCTCCTGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: GVPVNHTGTFSWLSQEGGGRGQS*LQLLHS Trigger: CGAGTGCAGGAGCTGGAGGCAGCTCTGGCCACGGCC...TCCCCCTTCTTGGCTCAGCCAAGAGAAGGTACCAGTGTGGTTGACAGGAACGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR GCA 90 bp | AGAATGACAGCACTGGCCCTTTCTGCCCCAAGCCCCACACGCCAGGCAGAGTTGAGCTCCGAATGCTCCTaGCTGGCCGTGGCCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RMTALALSAPSPTRQAELSSECS*LAVARA Trigger: AGCTCTGGCCACGGCCAGGCAGGAGCATTCGGAGCT...CAACTCTGCCTGGCGTGTGGGGCTTGGGGCAGAAAGGGCCAGTGCTGTCATTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGGAGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCTCAGCCTCCATGCTCTaGAGCAGCCCTGTCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGRENVKPPGVCGGSLAFSASML*SSPVRS Trigger: GGAGCGGACAGGGCTGCTGCAGAGCATGGAGGCTGA...GAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCTCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR GCA 90 bp | AGAATGACAGCACTGGCCCTTTCTGCCCCAAGCCCCACACGCCAGGCAGAGTTGTCCTCGCCCCCACTCTaGACCGCTGCCATCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: RMTALALSAPSPTRQAELSSPPL*TAAIRT Trigger: AGTCCTGATGGCAGCGGTGCAGAGTGGGGGCGAGGA...CAACTCTGCCTGGCGTGTGGGGCTTGGGGCAGAAAGGGCCAGTGCTGTCATTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTCTTGGCTGAGCCAAGAAGGGGGAGTTAGGGCGGGGCGCGGAGGCTGCATTCCACCTTGGTGTTaGGGATGTAGGTGCGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TFSWLSQEGGVRAGRGGCIPPWC*GCRCGP Trigger: TGGCCCGCACCTACATCCCCAACACCAAGGTGGAAT...GCAGCCTCCGCGCCCCGCCCTAACTCCCCCTTCTTGGCTCAGCCAAGAGAAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCTGAGAGCTCCCCATaGGACCGGGAGAGCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRENVKPPGVCGGSLAFLSESSP*DRESPL Trigger: CAAGGGGCTCTCCCGGTCCCATGGGGAGCTCTCAGA...CAGGAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCCGAGTCTGAGCTGCTaGCCTCCCCTGGACCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGRENVKPPGVCGGSLAFPSLSC*PPLDLR Trigger: TCTCAGGTCCAGGGGAGGCCAGCAGCTCAGACTCGG...GAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCTCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR TCA 90 bp | GGCGTTCCTGTCAACCACACTGGTACCTTCTCTTGGCTGAGCCAAGAAGGGGGAGGCCTCCCCTGGACCTaGGAACTGGGGAGCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVPVNHTGTFSWLSQEGGGLPWT*ELGSNG Trigger: CCCATTGCTCCCCAGTTCTCAGGTCCAGGGGAGGCC...TCCCCCTTCTTGGCTCAGCCAAGAGAAGGTACCAGTGTGGTTGACAGGAACGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCCCTTGTACTGCTCGGTGAGCTCCGAATGCTCCTGCCTGGCCGTGGCCAGTGTTGGGGATGTAGGTaGGGGCCACATTCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EPLVLLGELRMLLPGRGQCWGCR*GPHSGS Trigger: ACTTCCTGAATGTGGCCCGCACCTACATCCCCAACA...CTGGCCACGGCCAGGCAGGAGCATTCGGAGCTCACCGAGCAGTACAAGGGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGGAGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCGCCACATGGTCTCCCTaGTGCTGGCTCAGGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGRENVKPPGVCGGSLAFATWSP*CWLRMS Trigger: GGACATCCTGAGCCAGCAGCAGGGAGACCATGTGGC...GAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCTCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCACCTCCGAGTCTGAGCTaGTGGCCTCCCCTGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RENVKPPGVCGGSLAFLSPPSLS*WPPLDL Trigger: CAGGTCCAGGGGAGGCCAGCAGCTCAGACTCGGAGG...TGACAGGAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCAACCACACTGGTACCTTCTCCCACACACCCGGCCCTaGCGGTTCACATACCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGFVEGAWRSCQPHWYLLPHTRP*RFTYRN Trigger: GTTCCGGTATGTGAACCGCCAGGGCCGGGTGTGTGG...GAGAAGGTACCAGTGTGGTTGACAGGAACGCCAGGCTCCCTCCACAAACCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGAGGATACGGGCCACATaGTCTCCCTGCTGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRENVKPPGVCGGSLAFLRIRAT*SPCCWL Trigger: GAGCCAGCAGCAGGGAGACCATGTGGCCCGTATCCT...CAGGAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| 3UTR CAA 72 bp | CAGACTTCAGGCAGCACTGCAGCTTCTGCTGCCTTCTaGACCCGGGGACCTCAGGGAACACGACCCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSGSTAASAAF*TRGPQGTRPMW Trigger: CCACATGGGTCGTGTTCCCTGAGGTCCCCGGGTCAAGAAGGCAGCAGAAGCTGCAGTGCTGCCTGAAGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCACCTTCATGTGCAGGCTaGGCTCAGCCAGTCGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RENVKPPGVCGGSLAFLSPSCAG*AQPVGR Trigger: ACGGCCGACTGGCTGAGCTCAGCCTGCACATGAAGG...TGACAGGAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR TCA 90 bp | AGAATGACAGCACTGGCCCTTTCTGCCCCAAGCCCCACACGCCAGGCAGAGTTGTGCTCCTTCTCCTTCTaGAGCACACGGAGGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RMTALALSAPSPTRQAELCSFSF*STRRAD Trigger: GTCAGCCCTCCGTGTGCTTCAGAAGGAGAAGGAGCA...CAACTCTGCCTGGCGTGTGGGGCTTGGGGCAGAAAGGGCCAGTGCTGTCATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTGGGGACTCGTCCTCTaGGTCTGTCAGAGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRENVKPPGVCGGSLAFLWGLVL*VCQRCR Trigger: CCTGCATCTCTGACAGACTCAGAGGACGAGTCCCCA...CAGGAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCAACCACACTGGTACCTTCTCGTCTCTAGCTCCTGCTaGACTGGCCAACTCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGFVEGAWRSCQPHWYLLVSSSC*TGQLLP Trigger: GGGGAGGAGTTGGCCAGTGCAGCAGGAGCTAGAGAC...GAGAAGGTACCAGTGTGGTTGACAGGAACGCCAGGCTCCCTCCACAAACCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGGAGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCCTTTTCAGCCTCCATaGTCTGCAGCAGCCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGRENVKPPGVCGGSLAFPFQPP*SAAALS Trigger: GGACAGGGCTGCTGCAGAGCATGGAGGCTGAAAAGG...GAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCTCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | AGAATGACAGCACTGGCCCTTTCTGCCCCAAGCCCCACACGCCAGGCAGAGTTGCACTGGCACTGGGCATaGTACCCGGAGGCAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RMTALALSAPSPTRQAELHWHWA*YPEAKC Trigger: ACACTTTGCCTCCGGGTACCATGCCCAGTGCCAGTG...CAACTCTGCCTGGCGTGTGGGGCTTGGGGCAGAAAGGGCCAGTGCTGTCATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGGTAGAGTTGGGCTCCTaGTTTGGGCAGGTAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRENVKPPGVCGGSLAFLVELGS*FGQVAG Trigger: GCCAGCTACCTGCCCAAACCAGGAGCCCAACTCTAC...CAGGAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTCTTGGCTGAGCCAAGAAGGGGGAGTTAGGGCGGGGCGCGGAGGCTGCTGCTCCTTGTCTGCCTaGAATTCCTTCAGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TFSWLSQEGGVRAGRGGCCSLSA*NSFSCL Trigger: GAGACAGCTGAAGGAATTCCAGGCAGACAAGGAGCA...GCAGCCTCCGCGCCCCGCCCTAACTCCCCCTTCTTGGCTCAGCCAAGAGAAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGCAGGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTTCGGCCACTTTCTGCTaGGCTTGGCCCAGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVAGVGFGASEGSDVCVCSATFC*AWPRVS Trigger: GGACACCCTGGGCCAAGCCCAGCAGAAAGTGGCCGA...ACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCCTGCCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR CCA 90 bp | GGGAAATGGGGACACCTGGGATCCCTTGTCCCCTATCCCTCACAGAAGGCACAACCGAGTCTGAGCTGCTaGCCTCCCCTGGACCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GKWGHLGSLVPYPSQKAQPSLSC*PPLDLR Trigger: TCTCAGGTCCAGGGGAGGCCAGCAGCTCAGACTCGG...TTGTGCCTTCTGTGAGGGATAGGGGACAAGGGATCCCAGGTGTCCCCATTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGCAGGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTCTGGGACCCCAGGGCTaGCCTCTGACAGGGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVAGVGFGASEGSDVCVCLGPQG*PLTGNS Trigger: TGAGTTCCCTGTCAGAGGCCAGCCCTGGGGTCCCAG...ACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCCTGCCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 |
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| CDS-3UTR TCA 90 bp | AGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCAGATGTCCCTCTCTTCTaGGAGCTCCCCATGGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: RENVKPPGVCGGSLAFLSDVPLF*ELPMGP Trigger: CGGTCCCATGGGGAGCTCTCAGAAGAGAGGGACATC...TGACAGGAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR TCA 90 bp | CTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCAACCACACTGGTACCTTCTCCGCTTTCTGCTGGCTTaGGGCTGCAAGTTCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGFVEGAWRSCQPHWYLLRFLLA*GCKFLD Trigger: GTCCAGGAACTTGCAGCCTCAAGCCAGCAGAAAGCG...GAGAAGGTACCAGTGTGGTTGACAGGAACGCCAGGCTCCCTCCACAAACCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR GCA 90 bp | GATGGAAGATGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTGGCCGTGGCCAGAGCTaGCTCCAGCTCCTGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: DGRWSCKAWDESRVQAWSGRGQS*LQLLHS Trigger: CGAGTGCAGGAGCTGGAGGCAGCTCTGGCCACGGCC...AGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCATCTTCCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
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| CDS-3UTR GCA 90 bp | GGCGTTCCTGTCAACCACACTGGTACCTTCTCTTGGCTGAGCCAAGAAGGGGGAGCACCTTGCTCTTCTTaGCGGCTCTTGGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVPVNHTGTFSWLSQEGGAPCSS*RLLASS Trigger: GGAGGAGGCCAAGAGCCGGCAAGAAGAGCAAGGTGC...TCCCCCTTCTTGGCTCAGCCAAGAGAAGGTACCAGTGTGGTTGACAGGAACGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR GCA 90 bp | CCAGCAGAGAGAGAGAATGACAGCACTGGCCCTTTCTGCCCCAAGCCCCACACGCGTCATAGAAGGCACTaGCGAGCTCAGGAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PAERENDSTGPFCPKPHTRHRRH*RAQEAG Trigger: TCCTGCTTCCTGAGCTCGGCAGTGCCTTCTATGACG...CGTGTGGGGCTTGGGGCAGAAAGGGCCAGTGCTGTCATTCTCTCTCTCTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR CCA 90 bp | AGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCATCCAGTCACTGGCACTaGGCATGGTACCCGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RENVKPPGVCGGSLAFLSSSHWH*AWYPEA Trigger: TGCCTCCGGGTACCATGCCCAGTGCCAGTGACTGGA...TGACAGGAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR CCA 90 bp | TGTCATCCTCTAACTCCAGGATACGGGCCACATGGTCTCCCTGCTGCTGGCTCATCCAGTCACTGGCACTaGGCATGGTACCCGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CHPLTPGYGPHGLPAAGSSSHWH*AWYPEA Trigger: TGCCTCCGGGTACCATGCCCAGTGCCAGTGACTGGA...TGAGCCAGCAGCAGGGAGACCATGTGGCCCGTATCCTGGAGTTAGAGGATGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| CDS-3UTR CCA 90 bp | CCAGCAGAGAGAGAGAATGACAGCACTGGCCCTTTCTGCCCCAAGCCCCACACGTCATTCCGCTCCTGCTaGCTCTCATCCAGCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PAERENDSTGPFCPKPHTSFRSC*LSSSWF Trigger: GAACCAGCTGGATGAGAGCCAGCAGGAGCGGAATGA...CGTGTGGGGCTTGGGGCAGAAAGGGCCAGTGCTGTCATTCTCTCTCTCTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR CCA 90 bp | GGGAAATGGGGACACCTGGGATCCCTTGTCCCCTATCCCTCACAGAAGGCACAAAGGATACGGGCCACATaGTCTCCCTGCTGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GKWGHLGSLVPYPSQKAQRIRAT*SPCCWL Trigger: GAGCCAGCAGCAGGGAGACCATGTGGCCCGTATCCT...TTGTGCCTTCTGTGAGGGATAGGGGACAAGGGATCCCAGGTGTCCCCATTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
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| CDS-3UTR CCA 90 bp | GGGGTGGCAGGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGAGGCTGCAAGTTCCTaGACCCCTCGGAGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVAGVGFGASEGSDVCVCEAASS*TPRSCS Trigger: AGAGCAGCTCCGAGGGGTCCAGGAACTTGCAGCCTC...ACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCCTGCCACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
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| CDS-3UTR CCA 90 bp | AGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCAGAGGCTGCAAGTTCCTaGACCCCTCGGAGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RENVKPPGVCGGSLAFLSEAASS*TPRSCS Trigger: AGAGCAGCTCCGAGGGGTCCAGGAACTTGCAGCCTC...TGACAGGAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR TCA 90 bp | GGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGTGTGTGTAGGCCTCCCCTGGACCTaGGAACTGGGGAGCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGFGASEGSDVCVCVCVGLPWT*ELGSNG Trigger: CCCATTGCTCCCCAGTTCTCAGGTCCAGGGGAGGCC...TACACACACACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| CDS-3UTR GCA 90 bp | AGAATGACAGCACTGGCCCTTTCTGCCCCAAGCCCCACACGCCAGGCAGAGTTGAACTGCAGCTTCAGCTaGATCAGGTCATTCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RMTALALSAPSPTRQAELNCSFS*IRSFRS Trigger: GGAGCGGAATGACCTGATGCAGCTGAAGCTGCAGTT...CAACTCTGCCTGGCGTGTGGGGCTTGGGGCAGAAAGGGCCAGTGCTGTCATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR GCA 90 bp | AGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCAACATGGTCTCCCTGCTaGTGGCTCAGGATGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RENVKPPGVCGGSLAFLSTWSPC*WLRMSL Trigger: GAGGGACATCCTGAGCCAGCAGCAGGGAGACCATGT...TGACAGGAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR GCA 90 bp | GGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGTGTGTGTACCTCCGAGTCTGAGCTaGTGGCCTCCCCTGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVGFGASEGSDVCVCVCVPPSLS*WPPLDL Trigger: CAGGTCCAGGGGAGGCCAGCAGCTCAGACTCGGAGG...TACACACACACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| CDS-3UTR GCA 90 bp | GATGGAAGATGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTCCTCCGAGTCTGAGCTaGTGGCCTCCCCTGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: DGRWSCKAWDESRVQAWSPPSLS*WPPLDL Trigger: CAGGTCCAGGGGAGGCCAGCAGCTCAGACTCGGAGG...AGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCATCTTCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| CDS-3UTR GCA 90 bp | GGGAAATGGGGACACCTGGGATCCCTTGTCCCCTATCCCTCACAGAAGGCACAACAGGGAAGCGCTCCTTaGAGATGGGACACTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKWGHLGSLVPYPSQKAQQGSAP*RWDTPS Trigger: GGAAGGAGTGTCCCATCTGCAAGGAGCGCTTCCCTG...TTGTGCCTTCTGTGAGGGATAGGGGACAAGGGATCCCAGGTGTCCCCATTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
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| CDS-3UTR CCA 90 bp | GGGAAATGGGGACACCTGGGATCCCTTGTCCCCTATCCCTCACAGAAGGCACAACACTGGCACTGGGCATaGTACCCGGAGGCAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GKWGHLGSLVPYPSQKAQHWHWA*YPEAKC Trigger: ACACTTTGCCTCCGGGTACCATGCCCAGTGCCAGTG...TTGTGCCTTCTGTGAGGGATAGGGGACAAGGGATCCCAGGTGTCCCCATTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
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| CDS-3UTR CCA 90 bp | GGGGTGGCAGGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTTGCCAATCCAGTCACTaGCACTGGGCATGGTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: GVAGVGFGASEGSDVCVCCQSSH*HWAWYP Trigger: CGGGTACCATGCCCAGTGCCAGTGACTGGATTGGCA...ACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCCTGCCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
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| CDS-3UTR CCA 90 bp | GGCGTTCCTGTCAACCACACTGGTACCTTCTCTTGGCTGAGCCAAGAAGGGGGATGCCAATCCAGTCACTaGCACTGGGCATGGTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: GVPVNHTGTFSWLSQEGGCQSSH*HWAWYP Trigger: CGGGTACCATGCCCAGTGCCAGTGACTGGATTGGCA...TCCCCCTTCTTGGCTCAGCCAAGAGAAGGTACCAGTGTGGTTGACAGGAACGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR CCA 90 bp | GGAGGGAGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCGCTCCTTGCTCCACTaGCACTTTTCCTCCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: GGRENVKPPGVCGGSLAFRSLLH*HFSSFM Trigger: CATGAAGGAGGAAAAGTGCCAGTGGAGCAAGGAGCG...GAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCTCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR CCA 90 bp | AGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCACCTGGACCTGAGAACTaGGGAGCAATGGGTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RENVKPPGVCGGSLAFLSPGPEN*GAMGAG Trigger: ACCAGCACCCATTGCTCCCCAGTTCTCAGGTCCAGG...TGACAGGAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR TCA 90 bp | TGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTGTAGGAACACCTTCATGTGCAGGCTaGGCTCAGCCAGTCGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: WSCKAWDESRVQAWSVGTPSCAG*AQPVGR Trigger: ACGGCCGACTGGCTGAGCTCAGCCTGCACATGAAGG...TGTTCCTACAGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
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| CDS-3UTR TCA 90 bp | GGGAAATGGGGACACCTGGGATCCCTTGTCCCCTATCCCTCACAGAAGGCACAATCAGTCTTGAACACGTaGCTCTGGGTCCTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKWGHLGSLVPYPSQKAQSVLNT*LWVLSS Trigger: GGAGGAGAGGACCCAGAGTCACGTGTTCAAGACTGA...TTGTGCCTTCTGTGAGGGATAGGGGACAAGGGATCCCAGGTGTCCCCATTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
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| CDS-3UTR TCA 90 bp | GGCGTTCCTGTCAACCACACTGGTACCTTCTCTTGGCTGAGCCAAGAAGGGGGACGCTGCCATCAGGACTaGCTTCTCATCTTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVPVNHTGTFSWLSQEGGRCHQD*LLIFSL Trigger: GAGGCTGAAGATGAGAAGTCAGTCCTGATGGCAGCG...TCCCCCTTCTTGGCTCAGCCAAGAGAAGGTACCAGTGTGGTTGACAGGAACGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR GCA 90 bp | GATGGAAGATGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTAGCTCGGCCACTTTCTaGTGGGCTTGGCCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DGRWSCKAWDESRVQAWSSSATF*WAWPRV Trigger: CACCCTGGGCCAAGCCCAGCAGAAAGTGGCCGAGCT...AGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCATCTTCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
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| CDS-3UTR GCA 90 bp | GATGGAAGATGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTTCCTCGCCCCCACTCTaGACCGCTGCCATCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: DGRWSCKAWDESRVQAWSSSPPL*TAAIRT Trigger: AGTCCTGATGGCAGCGGTGCAGAGTGGGGGCGAGGA...AGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCATCTTCCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| CDS-3UTR GCA 90 bp | TGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTGTAGGAACATCCTCGCCCCCACTCTaGACCGCTGCCATCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: WSCKAWDESRVQAWSVGTSSPPL*TAAIRT Trigger: AGTCCTGATGGCAGCGGTGCAGAGTGGGGGCGAGGA...TGTTCCTACAGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| CDS-3UTR CCA 90 bp | GGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGTGTGTGTACCACACACCCGGCCCTaGCGGTTCACATACCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GVGFGASEGSDVCVCVCVPHTRP*RFTYRN Trigger: GTTCCGGTATGTGAACCGCCAGGGCCGGGTGTGTGG...TACACACACACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
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| CDS-3UTR CCA 90 bp | TGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTGTAGGAACATCTGAGAGCTCCCCATaGGACCGGGAGAGCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WSCKAWDESRVQAWSVGTSESSP*DRESPL Trigger: CAAGGGGCTCTCCCGGTCCCATGGGGAGCTCTCAGA...TGTTCCTACAGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
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| CDS-3UTR CCA 90 bp | GGGGTGGCAGGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTCTTCTTGCCGGCTCTTaGCCTCCTCCAGCTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GVAGVGFGASEGSDVCVCLLAGS*PPPALY Trigger: ATACAGAGCTGGAGGAGGCCAAGAGCCGGCAAGAAG...ACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCCTGCCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
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| CDS-3UTR CCA 90 bp | GGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGTGTGTGTACCGAGTCTGAGCTGCTaGCCTCCCCTGGACCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVGFGASEGSDVCVCVCVPSLSC*PPLDLR Trigger: TCTCAGGTCCAGGGGAGGCCAGCAGCTCAGACTCGG...TACACACACACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| CDS-3UTR CCA 90 bp | GATGGAAGATGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTCTGGGACCCCAGGGCTaGCCTCTGACAGGGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: DGRWSCKAWDESRVQAWSLGPQG*PLTGNS Trigger: TGAGTTCCCTGTCAGAGGCCAGCCCTGGGGTCCCAG...AGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCATCTTCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| CDS-3UTR TCA 90 bp | TGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTGTAGGAACAGGGCCAGCTCAGTCTTaGACACGTGACTCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WSCKAWDESRVQAWSVGTGPAQS*TRDSGS Trigger: GGACCCAGAGTCACGTGTTCAAGACTGAGCTGGCCC...TGTTCCTACAGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
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| CDS-3UTR TCA 90 bp | CGTCTGCTGCCTAATGGGGCTGAAAATGAGTCTGACACTGTTCTTCATCTTCCTTTCAGCCTCCGAGTCTaGGCTGCTGGCCTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLPNGAENESDTVLHLPFSLRV*AAGLPW Trigger: CCAGGGGAGGCCAGCAGCTCAGACTCGGAGGCTGAA...AGGAAGATGAAGAACAGTGTCAGACTCATTTTCAGCCCCATTAGGCAGCAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR GCA 90 bp | GGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGTGTGTGTAGCCACATGGTCTCCCTaGTGCTGGCTCAGGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVGFGASEGSDVCVCVCVATWSP*CWLRMS Trigger: GGACATCCTGAGCCAGCAGCAGGGAGACCATGTGGC...TACACACACACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
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| CDS-3UTR GCA 90 bp | CTCCTAGAGTTTCCCAGGAAGTCAGGGATGAGCAACATCTCTAGCATAGCCAGAAGCTCGGCCACTTTCTaGTGGGCTTGGCCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLEFPRKSGMSNISSIARSSATF*WAWPRV Trigger: CACCCTGGGCCAAGCCCAGCAGAAAGTGGCCGAGCT...TCTGGCTATGCTAGAGATGTTGCTCATCCCTGACTTCCTGGGAAACTCTAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR GCA 90 bp | CTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCAACCACACTGGTACCTTCTCTTTTCCTCCTTCATGTaGAGGCTGAGCTCAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGFVEGAWRSCQPHWYLLFSSFM*RLSSAS Trigger: ACTGGCTGAGCTCAGCCTGCACATGAAGGAGGAAAA...GAGAAGGTACCAGTGTGGTTGACAGGAACGCCAGGCTCCCTCCACAAACCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR GCA 90 bp | GGACACCTGGGATCCCTTGTCCCCTATCCCTCACAGAAGGCACAAATACATTTTTCAGCCTCCATGCTCTaGAGCAGCCCTGTCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GHLGSLVPYPSQKAQIHFSASML*SSPVRS Trigger: GGAGCGGACAGGGCTGCTGCAGAGCATGGAGGCTGA...AAAATGTATTTGTGCCTTCTGTGAGGGATAGGGGACAAGGGATCCCAGGTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR CCA 90 bp | TGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTGTAGGAACATCCAGTCACTGGCACTaGGCATGGTACCCGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WSCKAWDESRVQAWSVGTSSHWH*AWYPEA Trigger: TGCCTCCGGGTACCATGCCCAGTGCCAGTGACTGGA...TGTTCCTACAGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTGCCGGCTCTTGGCCTCCTCCAGCTCTGTATTTAAGCAGCAGTTCTCCTGCCAATCCAGTCACTaGCACTGGGCATGGTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSCRLLASSSSVFKQQFSCQSSH*HWAWYP Trigger: CGGGTACCATGCCCAGTGCCAGTGACTGGATTGGCA...GGAGAACTGCTGCTTAAATACAGAGCTGGAGGAGGCCAAGAGCCGGCAAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
||
| CDS-3UTR CCA 90 bp | GGCGTTCCTGTCAACCACACTGGTACCTTCTCTTGGCTGAGCCAAGAAGGGGGAGTTTGGGCAGGTAGCTaGCTTGGAATTGGACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVPVNHTGTFSWLSQEGGVWAGS*LGIGHW Trigger: CCAGTGTCCAATTCCAAGCCAGCTACCTGCCCAAAC...TCCCCCTTCTTGGCTCAGCCAAGAGAAGGTACCAGTGTGGTTGACAGGAACGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTAGAGTTTCCCAGGAAGTCAGGGATGAGCAACATCTCTAGCATAGCCAGAGGGCCAGCTCAGTCTTaGACACGTGACTCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLEFPRKSGMSNISSIARGPAQS*TRDSGS Trigger: GGACCCAGAGTCACGTGTTCAAGACTGAGCTGGCCC...TCTGGCTATGCTAGAGATGTTGCTCATCCCTGACTTCCTGGGAAACTCTAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTGTAGGAACATGCTCCTTCTCCTTCTaGAGCACACGGAGGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WSCKAWDESRVQAWSVGTCSFSF*STRRAD Trigger: GTCAGCCCTCCGTGTGCTTCAGAAGGAGAAGGAGCA...TGTTCCTACAGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGTGTGTGTATGGGGACTCGTCCTCTaGGTCTGTCAGAGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGFGASEGSDVCVCVCVWGLVL*VCQRCR Trigger: CCTGCATCTCTGACAGACTCAGAGGACGAGTCCCCA...TACACACACACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR TCA 90 bp | CAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGTTCAGCCTCCGAGTCTaGGCTGCTGGCCTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKSKLSHCFQDRLLLGTKFSLRV*AAGLPW Trigger: CCAGGGGAGGCCAGCAGCTCAGACTCGGAGGCTGAA...CTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR TCA 90 bp | GATGGAAGATGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTCCCAGGGCTGGCCTCTaGCAGGGAACTCACTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: DGRWSCKAWDESRVQAWSPRAGL*QGTHCK Trigger: TTTACAGTGAGTTCCCTGTCAGAGGCCAGCCCTGGG...AGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCATCTTCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCGGCCGTGGCCAGAGCTaGCTCCAGCTCCTGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: NCGNNSIPARESHLHPGSGRGQS*LQLLHS Trigger: CGAGTGCAGGAGCTGGAGGCAGCTCTGGCCACGGCC...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | GGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGTGTGTGTACCTTTTCAGCCTCCATaGTCTGCAGCAGCCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVGFGASEGSDVCVCVCVPFQPP*SAAALS Trigger: GGACAGGGCTGCTGCAGAGCATGGAGGCTGAAAAGG...TACACACACACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTGTAGGAACACCTGGACCTGAGAACTaGGGAGCAATGGGTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WSCKAWDESRVQAWSVGTPGPEN*GAMGAG Trigger: ACCAGCACCCATTGCTCCCCAGTTCTCAGGTCCAGG...TGTTCCTACAGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGTGTGTGTACCTGGACCTGAGAACTaGGGAGCAATGGGTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVGFGASEGSDVCVCVCVPGPEN*GAMGAG Trigger: ACCAGCACCCATTGCTCCCCAGTTCTCAGGTCCAGG...TACACACACACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTGTTCCTAACATGCCATCCTGGTCACTCTCTGTTCAAGCCTCTCCTATGCAGGAAGCAGGAGGCTaGCTTCCTCGCCCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLVPNMPSWSLSVQASPMQEAGG*LPRPHS Trigger: AGAGTGGGGGCGAGGAAGCCAGCCTCCTGCTTCCTG...CATAGGAGAGGCTTGAACAGAGAGTGACCAGGATGGCATGTTAGGAACAAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR TCA 90 bp | GGACACCTGGGATCCCTTGTCCCCTATCCCTCACAGAAGGCACAAATACATTTTTGGGGACTCGTCCTCTaGGTCTGTCAGAGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHLGSLVPYPSQKAQIHFWGLVL*VCQRCR Trigger: CCTGCATCTCTGACAGACTCAGAGGACGAGTCCCCA...AAAATGTATTTGTGCCTTCTGTGAGGGATAGGGGACAAGGGATCCCAGGTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR TCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCTTCAGCCTCCGAGTCTaGGCTGCTGGCCTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NCGNNSIPARESHLHPGSFSLRV*AAGLPW Trigger: CCAGGGGAGGCCAGCAGCTCAGACTCGGAGGCTGAA...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGTGTGTGTACGCTGCCATCAGGACTaGCTTCTCATCTTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVGFGASEGSDVCVCVCVRCHQD*LLIFSL Trigger: GAGGCTGAAGATGAGAAGTCAGTCCTGATGGCAGCG...TACACACACACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | GGACACCTGGGATCCCTTGTCCCCTATCCCTCACAGAAGGCACAAATACATTTTAGGAGGGCCGCTTTCTaGTGGCTTGAGGCTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GHLGSLVPYPSQKAQIHFRRAAF*WLEAAS Trigger: ACTTGCAGCCTCAAGCCAGCAGAAAGCGGCCCTCCT...AAAATGTATTTGTGCCTTCTGTGAGGGATAGGGGACAAGGGATCCCAGGTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR GCA 90 bp | CTCCTAGAGTTTCCCAGGAAGTCAGGGATGAGCAACATCTCTAGCATAGCCAGAAGGAGGGCCGCTTTCTaGTGGCTTGAGGCTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLEFPRKSGMSNISSIARRRAAF*WLEAAS Trigger: ACTTGCAGCCTCAAGCCAGCAGAAAGCGGCCCTCCT...TCTGGCTATGCTAGAGATGTTGCTCATCCCTGACTTCCTGGGAAACTCTAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTTGTTCCTAACATGCCATCCTGGTCACTCTCTGTTCAAGCCTCTCCTATGTGGGTCCTCTCCTCCTaGACCGTCTTCTCCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLVPNMPSWSLSVQASPMWVLSS*TVFSSR Trigger: CCGACTGGAGAAGACGGTGCAGGAGGAGAGGACCCA...CATAGGAGAGGCTTGAACAGAGAGTGACCAGGATGGCATGTTAGGAACAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACCCTCCGAGTCTGAGCTaGTGGCCTCCCCTGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGSSKPFQKSKLSHCFQDPPSLS*WPPLDL Trigger: CAGGTCCAGGGGAGGCCAGCAGCTCAGACTCGGAGG...GTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | GATGGAAGATGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTCGTCATAGAAGGCACTaGCGAGCTCAGGAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DGRWSCKAWDESRVQAWSRHRRH*RAQEAG Trigger: TCCTGCTTCCTGAGCTCGGCAGTGCCTTCTATGACG...AGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCATCTTCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTGTAGGAACAATTCCACCTTGGTGTTaGGGATGTAGGTGCGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WSCKAWDESRVQAWSVGTIPPWC*GCRCGP Trigger: TGGCCCGCACCTACATCCCCAACACCAAGGTGGAAT...TGTTCCTACAGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGTGTGTGTAATTCCACCTTGGTGTTaGGGATGTAGGTGCGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVGFGASEGSDVCVCVCVIPPWC*GCRCGP Trigger: TGGCCCGCACCTACATCCCCAACACCAAGGTGGAAT...TACACACACACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGTCACTCATGGTCTGGATGTCATCCTCTAACTCCAGGATACGGGCCACATCACTGGCACTGGGCATaGTACCCGGAGGCAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCHSWSGCHPLTPGYGPHHWHWA*YPEAKC Trigger: ACACTTTGCCTCCGGGTACCATGCCCAGTGCCAGTG...ATGTGGCCCGTATCCTGGAGTTAGAGGATGACATCCAGACCATGAGTGACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTGTAGGAACATCACCAGCTCATCCATaGGCCTTGGCTCTCGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: WSCKAWDESRVQAWSVGTSPAHP*ALALGT Trigger: AGTTCCGAGAGCCAAGGCCCATGGATGAGCTGGTGA...TGTTCCTACAGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGACCTTCCATGGAGGGTTaGCTGGGACCCCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKVNSATASKTDCCLGQRPSMEG*LGPQGW Trigger: CCAGCCCTGGGGTCCCAGCCAACCCTCCATGGAAGG...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACCCTTCCATGGAGGGTTaGCTGGGACCCCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGSSKPFQKSKLSHCFQDPSMEG*LGPQGW Trigger: CCAGCCCTGGGGTCCCAGCCAACCCTCCATGGAAGG...GTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGGGGACACTCCTTCCATaGAGGGTTGGCTGGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: QKSKLSHCFQDRLLLGTKGTLLP*RVGWDP Trigger: GGGGTCCCAGCCAACCCTCCATGGAAGGAGTGTCCC...CTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGTGTGTGTAAGCGCTCCTTGCAGATaGGACACTCCTTCCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVGFGASEGSDVCVCVCVSAPCR*DTPSME Trigger: CTCCATGGAAGGAGTGTCCCATCTGCAAGGAGCGCT...TACACACACACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGTGTGTGTACTTGGCTCTTGGAATTaGACACTGGCATGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGFGASEGSDVCVCVCVLGSWN*TLAWVG Trigger: CCCCACCCATGCCAGTGTCCAATTCCAAGAGCCAAG...TACACACACACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229231.2 |
||
| 3UTR CAA 72 bp | TGCCTGGAATTCCTTCAGCTGTCTCAGGAGCTTCTCTaGTTCCCGTGTCAGGGCCTTCACTGTGTCTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLEFLQLSQELL*FPCQGLHCVSN Trigger: GTTAGAGACACAGTGAAGGCCCTGACACGGGAACAAGAGAAGCTCCTGAGACAGCTGAAGGAATTCCAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGACCTTCATGTGCAGGCTaGGCTCAGCCAGTCGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RKVNSATASKTDCCLGQRPSCAG*AQPVGR Trigger: ACGGCCGACTGGCTGAGCTCAGCCTGCACATGAAGG...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGGGCCTCCCCTGGACCTaGGAACTGGGGAGCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILVPLNLFRKVNSATASKGLPWT*ELGSNG Trigger: CCCATTGCTCCCCAGTTCTCAGGTCCAGGGGAGGCC...CTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | GATGGAAGATGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTAACTGCAGCTTCAGCTaGATCAGGTCATTCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DGRWSCKAWDESRVQAWSNCSFS*IRSFRS Trigger: GGAGCGGAATGACCTGATGCAGCTGAAGCTGCAGTT...AGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCATCTTCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAGCTCCGAATGCTCCTaGCTGGCCGTGGCCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SILVPLNLFRKVNSATASSSECS*LAVARA Trigger: AGCTCTGGCCACGGCCAGGCAGGAGCATTCGGAGCT...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCTCAGCCTCCATGCTCTaGAGCAGCCCTGTCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NCGNNSIPARESHLHPGSSASML*SSPVRS Trigger: GGAGCGGACAGGGCTGCTGCAGAGCATGGAGGCTGA...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACTCCTCGCCCCCACTCTaGACCGCTGCCATCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PGSSKPFQKSKLSHCFQDSSPPL*TAAIRT Trigger: AGTCCTGATGGCAGCGGTGCAGAGTGGGGGCGAGGA...GTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCACTTTGTCACTCATGGTCTGGATGTCATCCTCTAACTCCAGGATACGGGATTCCACCTTGGTGTTaGGGATGTAGGTGCGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SALCHSWSGCHPLTPGYGIPPWC*GCRCGP Trigger: TGGCCCGCACCTACATCCCCAACACCAAGGTGGAAT...CCCGTATCCTGGAGTTAGAGGATGACATCCAGACCATGAGTGACAAAGTGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTCATCAGCACTTTGTCACTCATGGTCTGGATGTCATCCTCTAACTCCAGGGTAGAGTTGGGCTCCTaGTTTGGGCAGGTAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFISTLSLMVWMSSSNSRVELGS*FGQVAG Trigger: GCCAGCTACCTGCCCAAACCAGGAGCCCAACTCTAC...CCTGGAGTTAGAGGATGACATCCAGACCATGAGTGACAAAGTGCTGATGAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
||
| CDS-3UTR CCA 90 bp | CGTCTGCTGCCTAATGGGGCTGAAAATGAGTCTGACACTGTTCTTCATCTTCCTCTCATCCATGGGCCTTaGCTCTCGGAACTGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLPNGAENESDTVLHLPLIHGP*LSELEG Trigger: CCCTTCCAGTTCCGAGAGCCAAGGCCCATGGATGAG...AGGAAGATGAAGAACAGTGTCAGACTCATTTTCAGCCCCATTAGGCAGCAGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGATCTGAGAGCTCCCCATaGGACCGGGAGAGCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKVNSATASKTDCCLGQRSESSP*DRESPL Trigger: CAAGGGGCTCTCCCGGTCCCATGGGGAGCTCTCAGA...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCATTGTCACTCATGGTCTaGATGTCATCCTCTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RENVKPPGVCGGSLAFLSLSLMV*MSSSNS Trigger: GGAGTTAGAGGATGACATCCAGACCATGAGTGACAA...TGACAGGAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | GGCGTTCCTGTCAACCACACTGGTACCTTCTCTTGGCTGAGCCAAGAAGGGGGAGCACTTTGTCACTCATaGTCTGGATGTCATCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GVPVNHTGTFSWLSQEGGALCHS*SGCHPL Trigger: TAGAGGATGACATCCAGACCATGAGTGACAAAGTGC...TCCCCCTTCTTGGCTCAGCCAAGAGAAGGTACCAGTGTGGTTGACAGGAACGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGCTGCCTAATGGGGCTGAAAATGAGTCTGACACTGTTCTTCATCTTCCTGAGGGCCGCTTTCTGCTaGCTTGAGGCTGCAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCCLMGLKMSLTLFFIFLRAAFC*LEAASS Trigger: GGAACTTGCAGCCTCAAGCCAGCAGAAAGCGGCCCT...CAGGAAGATGAAGAACAGTGTCAGACTCATTTTCAGCCCCATTAGGCAGCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | GATGGAAGATGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTCGCTCCTTGCTCCACTaGCACTTTTCCTCCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: DGRWSCKAWDESRVQAWSRSLLH*HFSSFM Trigger: CATGAAGGAGGAAAAGTGCCAGTGGAGCAAGGAGCG...AGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCATCTTCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGACCGAGTCTGAGCTGCTaGCCTCCCCTGGACCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKVNSATASKTDCCLGQRPSLSC*PPLDLR Trigger: TCTCAGGTCCAGGGGAGGCCAGCAGCTCAGACTCGG...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCCAGGAAGCAGGAGGCTaGCTTCCTCGCCCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SILVPLNLFRKVNSATASQEAGG*LPRPHS Trigger: AGAGTGGGGGCGAGGAAGCCAGCCTCCTGCTTCCTG...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCGGGACACTCCTTCCATaGAGGGTTGGCTGGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: NCGNNSIPARESHLHPGSGTLLP*RVGWDP Trigger: GGGGTCCCAGCCAACCCTCCATGGAAGGAGTGTCCC...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACGATGTCCCTCTCTTCTaGGAGCTCCCCATGGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: PGSSKPFQKSKLSHCFQDDVPLF*ELPMGP Trigger: CGGTCCCATGGGGAGCTCTCAGAAGAGAGGGACATC...GTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGAGATGTCCCTCTCTTCTaGGAGCTCCCCATGGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: RKVNSATASKTDCCLGQRDVPLF*ELPMGP Trigger: CGGTCCCATGGGGAGCTCTCAGAAGAGAGGGACATC...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR TCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCGGGCCAGCTCAGTCTTaGACACGTGACTCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NCGNNSIPARESHLHPGSGPAQS*TRDSGS Trigger: GGACCCAGAGTCACGTGTTCAAGACTGAGCTGGCCC...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR TCA 90 bp | CAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGCCCAGGGCTGGCCTCTaGCAGGGAACTCACTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QKSKLSHCFQDRLLLGTKPRAGL*QGTHCK Trigger: TTTACAGTGAGTTCCCTGTCAGAGGCCAGCCCTGGG...CTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGAGGTCATTCCGCTCCTaGTGGCTCTCATCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKSKLSHCFQDRLLLGTKRSFRS*WLSSSW Trigger: CCAGCTGGATGAGAGCCAGCAGGAGCGGAATGACCT...CTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCAGCTCCGAATGCTCCTaGCTGGCCGTGGCCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLNLFRKVNSATASKTDCSSECS*LAVARA Trigger: AGCTCTGGCCACGGCCAGGCAGGAGCATTCGGAGCT...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCGCACCTTGCTCTTCTTaGCGGCTCTTGGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SILVPLNLFRKVNSATASAPCSS*RLLASS Trigger: GGAGGAGGCCAAGAGCCGGCAAGAAGAGCAAGGTGC...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR GCA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCGTCTCTAGCTCCTGCTaGACTGGCCAACTCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SILVPLNLFRKVNSATASVSSSC*TGQLLP Trigger: GGGGAGGAGTTGGCCAGTGCAGCAGGAGCTAGAGAC...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | GATGGAAGATGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTTTTTCCTCCTTCATGTaGAGGCTGAGCTCAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DGRWSCKAWDESRVQAWSFSSFM*RLSSAS Trigger: ACTGGCTGAGCTCAGCCTGCACATGAAGGAGGAAAA...AGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCATCTTCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGCCTTTTCAGCCTCCATaGTCTGCAGCAGCCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QKSKLSHCFQDRLLLGTKPFQPP*SAAALS Trigger: GGACAGGGCTGCTGCAGAGCATGGAGGCTGAAAAGG...CTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACTGGGTCCTCTCCTCCTaGACCGTCTTCTCCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGSSKPFQKSKLSHCFQDWVLSS*TVFSSR Trigger: CCGACTGGAGAAGACGGTGCAGGAGGAGAGGACCCA...GTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTAGAGTTTCCCAGGAAGTCAGGGATGAGCAACATCTCTAGCATAGCCAGACTGGGGAGCAATGGGTaGTGGTTGGTTGATGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLEFPRKSGMSNISSIARLGSNG*WLVDDN Trigger: GTTGTCATCAACCAACCAGCACCCATTGCTCCCCAG...TCTGGCTATGCTAGAGATGTTGCTCATCCCTGACTTCCTGGGAAACTCTAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCTCCAGTCACTGGCACTaGGCATGGTACCCGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NCGNNSIPARESHLHPGSSSHWH*AWYPEA Trigger: TGCCTCCGGGTACCATGCCCAGTGCCAGTGACTGGA...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGGTAGAGTTGGGCTCCTaGTTTGGGCAGGTAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKSKLSHCFQDRLLLGTKVELGS*FGQVAG Trigger: GCCAGCTACCTGCCCAAACCAGGAGCCCAACTCTAC...CTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR CCA 90 bp | CGTCTGCTGCCTAATGGGGCTGAAAATGAGTCTGACACTGTTCTTCATCTTCCTTCACCAGCTCATCCATaGGCCTTGGCTCTCGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: RLLPNGAENESDTVLHLPSPAHP*ALALGT Trigger: AGTTCCGAGAGCCAAGGCCCATGGATGAGCTGGTGA...AGGAAGATGAAGAACAGTGTCAGACTCATTTTCAGCCCCATTAGGCAGCAGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR CCA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAGGATACGGGCCACATaGTCTCCCTGCTGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SILVPLNLFRKVNSATASRIRAT*SPCCWL Trigger: GAGCCAGCAGCAGGGAGACCATGTGGCCCGTATCCT...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | CGTCTGCTGCCTAATGGGGCTGAAAATGAGTCTGACACTGTTCTTCATCTTCCTCTTCTTGCCGGCTCTTaGCCTCCTCCAGCTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RLLPNGAENESDTVLHLPLLAGS*PPPALY Trigger: ATACAGAGCTGGAGGAGGCCAAGAGCCGGCAAGAAG...AGGAAGATGAAGAACAGTGTCAGACTCATTTTCAGCCCCATTAGGCAGCAGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGCAGGAAGCAGGAGGCTaGCTTCCTCGCCCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILVPLNLFRKVNSATASKQEAGG*LPRPHS Trigger: AGAGTGGGGGCGAGGAAGCCAGCCTCCTGCTTCCTG...CTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCCTGGGACCCCAGGGCTaGCCTCTGACAGGGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLNLFRKVNSATASKTDCLGPQG*PLTGNS Trigger: TGAGTTCCCTGTCAGAGGCCAGCCCTGGGGTCCCAG...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| CDS-3UTR CCA 90 bp | ATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGGGGACACTCCTTCCATaGAGGGTTGGCTGGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILVPLNLFRKVNSATASKGTLLP*RVGWDP Trigger: GGGGTCCCAGCCAACCCTCCATGGAAGGAGTGTCCC...CTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCACTTTGTCACTCATGGTCTGGATGTCATCCTCTAACTCCAGGATACGGGGTTGGGCTCCTGGTTTaGGCAGGTAGCTGGCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SALCHSWSGCHPLTPGYGVGLLV*AGSWLK Trigger: TTTAAGCCAGCTACCTGCCCAAACCAGGAGCCCAAC...CCCGTATCCTGGAGTTAGAGGATGACATCCAGACCATGAGTGACAAAGTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
||
| CDS-3UTR TCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCCGCTTTCTGCTGGCTTaGGGCTGCAAGTTCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NCGNNSIPARESHLHPGSRFLLA*GCKFLD Trigger: GTCCAGGAACTTGCAGCCTCAAGCCAGCAGAAAGCG...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGATGGGGACTCGTCCTCTaGGTCTGTCAGAGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKVNSATASKTDCCLGQRWGLVL*VCQRCR Trigger: CCTGCATCTCTGACAGACTCAGAGGACGAGTCCCCA...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| CDS-3UTR TCA 90 bp | CAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGCGCTGCCATCAGGACTaGCTTCTCATCTTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QKSKLSHCFQDRLLLGTKRCHQD*LLIFSL Trigger: GAGGCTGAAGATGAGAAGTCAGTCCTGATGGCAGCG...CTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| CDS-3UTR TCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCCCCAGGGCTGGCCTCTaGCAGGGAACTCACTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: NCGNNSIPARESHLHPGSPRAGL*QGTHCK Trigger: TTTACAGTGAGTTCCCTGTCAGAGGCCAGCCCTGGG...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| CDS-3UTR GCA 90 bp | GTCTGCTGCCTAATGGGGCTGAAAATGAGTCTGACACTGTTCTTCATCTTCCTGTGTTGGGGATGTAGGTaGGGGCCACATTCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCCLMGLKMSLTLFFIFLCWGCR*GPHSGS Trigger: ACTTCCTGAATGTGGCCCGCACCTACATCCCCAACA...CAGGAAGATGAAGAACAGTGTCAGACTCATTTTCAGCCCCATTAGGCAGCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR GCA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCACATGGTCTCCCTGCTaGTGGCTCAGGATGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SILVPLNLFRKVNSATASTWSPC*WLRMSL Trigger: GAGGGACATCCTGAGCCAGCAGCAGGGAGACCATGT...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGGCCACATGGTCTCCCTaGTGCTGGCTCAGGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILVPLNLFRKVNSATASKATWSP*CWLRMS Trigger: GGACATCCTGAGCCAGCAGCAGGGAGACCATGTGGC...CTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGAAGGAGGGCCGCTTTCTaGTGGCTTGAGGCTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKVNSATASKTDCCLGQRRRAAF*WLEAAS Trigger: ACTTGCAGCCTCAAGCCAGCAGAAAGCGGCCCTCCT...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGGGTCCTCTCCTCCTaGACCGTCTTCTCCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLNLFRKVNSATASKTDCWVLSS*TVFSSR Trigger: CCGACTGGAGAAGACGGTGCAGGAGGAGAGGACCCA...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCCAGGGAAGCGCTCCTTaGAGATGGGACACTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NCGNNSIPARESHLHPGSQGSAP*RWDTPS Trigger: GGAAGGAGTGTCCCATCTGCAAGGAGCGCTTCCCTG...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACCACTGGCACTGGGCATaGTACCCGGAGGCAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGSSKPFQKSKLSHCFQDHWHWA*YPEAKC Trigger: ACACTTTGCCTCCGGGTACCATGCCCAGTGCCAGTG...GTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACTGCCAATCCAGTCACTaGCACTGGGCATGGTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: PGSSKPFQKSKLSHCFQDCQSSH*HWAWYP Trigger: CGGGTACCATGCCCAGTGCCAGTGACTGGATTGGCA...GTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACGTTGGGCTCCTGGTTTaGGCAGGTAGCTGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGSSKPFQKSKLSHCFQDVGLLV*AGSWLG Trigger: TCCAAGCCAGCTACCTGCCCAAACCAGGAGCCCAAC...GTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR CCA 90 bp | GGACACCTGGGATCCCTTGTCCCCTATCCCTCACAGAAGGCACAAATACATTTTTGCTCCTTGTCTGCCTaGAATTCCTTCAGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHLGSLVPYPSQKAQIHFCSLSA*NSFSCL Trigger: GAGACAGCTGAAGGAATTCCAGGCAGACAAGGAGCA...AAAATGTATTTGTGCCTTCTGTGAGGGATAGGGGACAAGGGATCCCAGGTGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR CCA 90 bp | CAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGACTTTCTGCTGGGCTTaGCCCAGGGTGTCCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QKSKLSHCFQDRLLLGTKTFCWA*PRVSFM Trigger: CATGAAGGACACCCTGGGCCAAGCCCAGCAGAAAGT...CTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR CCA 90 bp | ACTCTCTGTTCAAGCCTCTCCTATGGCTTCTTCTGCTTAAAATATTCTCCAGATTCGGCCACTTTCTGCTaGGCTTGGCCCAGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLCSSLSYGFFCLKYSPDSATFC*AWPRVS Trigger: GGACACCCTGGGCCAAGCCCAGCAGAAAGTGGCCGA...ATCTGGAGAATATTTTAAGCAGAAGAAGCCATAGGAGAGGCTTGAACAGAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGGAGGCTGCAAGTTCCTaGACCCCTCGGAGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILVPLNLFRKVNSATASKEAASS*TPRSCS Trigger: AGAGCAGCTCCGAGGGGTCCAGGAACTTGCAGCCTC...CTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGAAGGGCCGCTTTCTGCTaGCTTGAGGCTGCAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKVNSATASKTDCCLGQRRAAFC*LEAASS Trigger: GGAACTTGCAGCCTCAAGCCAGCAGAAAGCGGCCCT...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACCCTGGACCTGAGAACTaGGGAGCAATGGGTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGSSKPFQKSKLSHCFQDPGPEN*GAMGAG Trigger: ACCAGCACCCATTGCTCCCCAGTTCTCAGGTCCAGG...GTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGAGCGCTCCTTGCAGATaGGACACTCCTTCCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QKSKLSHCFQDRLLLGTKSAPCR*DTPSME Trigger: CTCCATGGAAGGAGTGTCCCATCTGCAAGGAGCGCT...CTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR TCA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCTCAGTCTTGAACACGTaGCTCTGGGTCCTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SILVPLNLFRKVNSATASSVLNT*LWVLSS Trigger: GGAGGAGAGGACCCAGAGTCACGTGTTCAAGACTGA...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTCCTTCTCCTTCTaGAGCACACGGAGGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLNLFRKVNSATASKTDCCSFSF*STRRAD Trigger: GTCAGCCCTCCGTGTGCTTCAGAAGGAGAAGGAGCA...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR TCA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCCGCTGCCATCAGGACTaGCTTCTCATCTTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SILVPLNLFRKVNSATASRCHQD*LLIFSL Trigger: GAGGCTGAAGATGAGAAGTCAGTCCTGATGGCAGCG...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCACATGGTCTCCCTGCTaGTGGCTCAGGATGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLNLFRKVNSATASKTDCTWSPC*WLRMSL Trigger: GAGGGACATCCTGAGCCAGCAGCAGGGAGACCATGT...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCCAGGGAAGCGCTCCTTaGAGATGGGACACTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLNLFRKVNSATASKTDCQGSAP*RWDTPS Trigger: GGAAGGAGTGTCCCATCTGCAAGGAGCGCTTCCCTG...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGCTCATCCATGGGCCTTaGCTCTCGGAACTGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILVPLNLFRKVNSATASKLIHGP*LSELEG Trigger: CCCTTCCAGTTCCGAGAGCCAAGGCCCATGGATGAG...CTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR CCA 90 bp | CCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACTCATTCCGCTCCTGCTaGCTCTCATCCAGCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGSSKPFQKSKLSHCFQDSFRSC*LSSSWF Trigger: GAACCAGCTGGATGAGAGCCAGCAGGAGCGGAATGA...GTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCTCATTCCGCTCCTGCTaGCTCTCATCCAGCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NCGNNSIPARESHLHPGSSFRSC*LSSSWF Trigger: GAACCAGCTGGATGAGAGCCAGCAGGAGCGGAATGA...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCAGGGCCGCTTTCTGCTaGCTTGAGGCTGCAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLNLFRKVNSATASKTDCRAAFC*LEAASS Trigger: GGAACTTGCAGCCTCAAGCCAGCAGAAAGCGGCCCT...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCAGCGCTCCTTGCAGATaGGACACTCCTTCCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NCGNNSIPARESHLHPGSSAPCR*DTPSME Trigger: CTCCATGGAAGGAGTGTCCCATCTGCAAGGAGCGCT...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCTGTTGGGGATGTAGGTaGGGGCCACATTCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SILVPLNLFRKVNSATASCWGCR*GPHSGS Trigger: ACTTCCTGAATGTGGCCCGCACCTACATCCCCAACA...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAACTGCAGCTTCAGCTaGATCAGGTCATTCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGSSKPFQKSKLSHCFQDNCSFS*IRSFRS Trigger: GGAGCGGAATGACCTGATGCAGCTGAAGCTGCAGTT...GTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCCTGGGGAGCAATGGGTaGTGGTTGGTTGATGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: NCGNNSIPARESHLHPGSLGSNG*WLVDDN Trigger: GTTGTCATCAACCAACCAGCACCCATTGCTCCCCAG...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGACTGGGGAGCAATGGGTaGTGGTTGGTTGATGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: RKVNSATASKTDCCLGQRLGSNG*WLVDDN Trigger: GTTGTCATCAACCAACCAGCACCCATTGCTCCCCAG...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGCGTCATAGAAGGCACTaGCGAGCTCAGGAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILVPLNLFRKVNSATASKRHRRH*RAQEAG Trigger: TCCTGCTTCCTGAGCTCGGCAGTGCCTTCTATGACG...CTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCCGTCATAGAAGGCACTaGCGAGCTCAGGAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLNLFRKVNSATASKTDCRHRRH*RAQEAG Trigger: TCCTGCTTCCTGAGCTCGGCAGTGCCTTCTATGACG...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGAGTTTGGGCAGGTAGCTaGCTTGGAATTGGACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKVNSATASKTDCCLGQRVWAGS*LGIGHW Trigger: CCAGTGTCCAATTCCAAGCCAGCTACCTGCCCAAAC...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR CCA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCATGGGCCTTGGCTCTTaGAATTGGACACTGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SILVPLNLFRKVNSATASMGLGS*NWTLAW Trigger: CCATGCCAGTGTCCAATTCCAAGAGCCAAGGCCCAT...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229231.2 |
||
| CDS-3UTR TCA 90 bp | ACTCTCTGTTCAAGCCTCTCCTATGGCTTCTTCTGCTTAAAATATTCTCCAGATTCAGTCTTGAACACGTaGCTCTGGGTCCTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLCSSLSYGFFCLKYSPDSVLNT*LWVLSS Trigger: GGAGGAGAGGACCCAGAGTCACGTGTTCAAGACTGA...ATCTGGAGAATATTTTAAGCAGAAGAAGCCATAGGAGAGGCTTGAACAGAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGTTGGGGATGTAGGTaGGGGCCACATTCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLNLFRKVNSATASKTDCCWGCR*GPHSGS Trigger: ACTTCCTGAATGTGGCCCGCACCTACATCCCCAACA...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCTTTTCCTCCTTCATGTaGAGGCTGAGCTCAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SILVPLNLFRKVNSATASFSSFM*RLSSAS Trigger: ACTGGCTGAGCTCAGCCTGCACATGAAGGAGGAAAA...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCAGTGACATTCCACCTTaGTGTTGGGGATGTAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NCGNNSIPARESHLHPGSSDIPP*CWGCRC Trigger: GCACCTACATCCCCAACACCAAGGTGGAATGTCACT...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGATGCTCCTTGTCTGCCTaGAATTCCTTCAGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKVNSATASKTDCCLGQRCSLSA*NSFSCL Trigger: GAGACAGCTGAAGGAATTCCAGGCAGACAAGGAGCA...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTCTGTTCAAGCCTCTCCTATGGCTTCTTCTGCTTAAAATATTCTCCAGATACTTTCTGCTGGGCTTaGCCCAGGGTGTCCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: TLCSSLSYGFFCLKYSPDTFCWA*PRVSFM Trigger: CATGAAGGACACCCTGGGCCAAGCCCAGCAGAAAGT...ATCTGGAGAATATTTTAAGCAGAAGAAGCCATAGGAGAGGCTTGAACAGAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGCGCTCCTTGCTCCACTaGCACTTTTCCTCCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: ILVPLNLFRKVNSATASKRSLLH*HFSSFM Trigger: CATGAAGGAGGAAAAGTGCCAGTGGAGCAAGGAGCG...CTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGGGGAGCAGGACAATTTaGGCTCCACGGAAGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILVPLNLFRKVNSATASKGSRTI*APRKMK Trigger: CTTCATCTTCCGTGGAGCCCAAATTGTCCTGCTCCC...CTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168112.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACCTCATCCATGGGCCTTaGCTCTTGGAATTGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: PGSSKPFQKSKLSHCFQDLIHGP*LLELDT Trigger: AGTGTCCAATTCCAAGAGCCAAGGCCCATGGATGAG...GTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCTCACCAGCTCATCCATaGGCCTTGGCTCTTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SILVPLNLFRKVNSATASSPAHP*ALALGI Trigger: AATTCCAAGAGCCAAGGCCCATGGATGAGCTGGTGA...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGTTGTCACTCATGGTCTaGATGTCATCCTCTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: QKSKLSHCFQDRLLLGTKLSLMV*MSSSNS Trigger: GGAGTTAGAGGATGACATCCAGACCATGAGTGACAA...CTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCAAGGTGAAAGGGTCCTaGGTGCTGAAGAAGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: NCGNNSIPARESHLHPGSKVKGS*VLKKKC Trigger: GCATTTCTTCTTCAGCACCCAGGACCCTTTCACCTT...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGGTGAAAGGGTCCTaGGTGCTGAAGAAGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SILVPLNLFRKVNSATASKVKGS*VLKKKC Trigger: GCATTTCTTCTTCAGCACCCAGGACCCTTTCACCTT...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGAAAGGTGAAAGGGTCCTaGGTGCTGAAGAAGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: RKVNSATASKTDCCLGQRKVKGS*VLKKKC Trigger: GCATTTCTTCTTCAGCACCCAGGACCCTTTCACCTT...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| 3UTR CAA 72 bp | CAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATaGCTGCTTGGGACAAAGACATCAGGATGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: QKSKLSHCFQDR*LLGTKTSGWKM Trigger: CATCTTCCATCCTGATGTCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCAATTCAGCCTCACTCTaGTCCTTGTCTGCCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLNLFRKVNSATASKTDCNSASL*SLSAWN Trigger: ATTCCAGGCAGACAAGGAGCAGAGTGAGGCTGAATT...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR CCA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCGCACTTTGTCACTCATaGTCTGGATGTCATCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: NCGNNSIPARESHLHPGSALCHS*SGCHPL Trigger: TAGAGGATGACATCCAGACCATGAGTGACAAAGTGC...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTCTGTTCAAGCCTCTCCTATGGCTTCTTCTGCTTAAAATATTCTCCAGATAATTCAGCCTCACTCTaGTCCTTGTCTGCCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TLCSSLSYGFFCLKYSPDNSASL*SLSAWN Trigger: ATTCCAGGCAGACAAGGAGCAGAGTGAGGCTGAATT...ATCTGGAGAATATTTTAAGCAGAAGAAGCCATAGGAGAGGCTTGAACAGAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTTGTCACTCATGGTCTaGATGTCATCCTCTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLNLFRKVNSATASKTDCLSLMV*MSSSNS Trigger: GGAGTTAGAGGATGACATCCAGACCATGAGTGACAA...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCGCACTTTGTCACTCATaGTCTGGATGTCATCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PLNLFRKVNSATASKTDCALCHS*SGCHPL Trigger: TAGAGGATGACATCCAGACCATGAGTGACAAAGTGC...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTCTCTTGGCTGAGCCAAGAAGGGGGAGTTAGGGCGGGGCGCGGAGGCTGCTCAGCCAGTCGGCCGTaGACTTCAGCCACCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TFSWLSQEGGVRAGRGGCSASRP*TSATSS Trigger: ACTGGAGGTGGCTGAAGTCAACGGCCGACTGGCTGA...GCAGCCTCCGCGCCCCGCCCTAACTCCCCCTTCTTGGCTCAGCCAAGAGAAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS TCA 90 bp | TGCACTGGCCAACTCCTCCCCAAGGAGGGCCGCTTTCTGCTGGCTTaGGGCTGCAAGTTCCTGGACCCCTCGGAGCTGCTCTTTCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CTGQLLPKEGRFLLA*GCKFLDPSELLFQG Trigger: CCCCTGAAAGAGCAGCTCCGAGGGGTCCAGGAACTTGCAGCCTCAAGCCAGCAGAAAGCGGCCCTCCTTGGGGAGGAGTTGGCCAGTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 ENSMUST00000229231.2 ENSMUST00000230035.2 |
||
| CDS CCA 90 bp | CCTGCTGCACTGGCCAACTCCTCCCCAAGGAGGGCCGCTTTCTGCTaGCTTGAGGCTGCAAGTTCCTGGACCCCTCGGAGCTGCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PAALANSSPRRAAFC*LEAASSWTPRSCSF Trigger: GAAAGAGCAGCTCCGAGGGGTCCAGGAACTTGCAGCCTCAAGCCAGCAGAAAGCGGCCCTCCTTGGGGAGGAGTTGGCCAGTGCAGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 ENSMUST00000229231.2 ENSMUST00000230035.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTCTCTTGGCTGAGCCAAGAAGGGGGAGTTAGGGCGGGGCGCGGAGGCTGCGGGCAGGTAGCTGGCTaGGAATTGGACACTGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TFSWLSQEGGVRAGRGGCGQVAG*ELDTGM Trigger: CATGCCAGTGTCCAATTCCAAGCCAGCTACCTGCCC...GCAGCCTCCGCGCCCCGCCCTAACTCCCCCTTCTTGGCTCAGCCAAGAGAAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS GCA 90 bp | GCTTTCTGCTGGCTTGAGGCTGCAAGTTCCTGGACCCCTCGGAGCTaGTCTTTCAGGGGCTCCAGCTCGGCCACTTTCTGCTGGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AFCWLEAASSWTPRS*SFRGSSSATFCWAW Trigger: CCAAGCCCAGCAGAAAGTGGCCGAGCTGGAGCCCCTGAAAGAGCAGCTCCGAGGGGTCCAGGAACTTGCAGCCTCAAGCCAGCAGAAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 ENSMUST00000230035.2 |
||
| CDS CCA 90 bp | GAGATGCAGGGCAGCTCAGCCCAGCAGTGGCTTCCTCGTCCTCTGTaGCAGCATCTTCGGTCCACTTCTCATCCGCCACCTTCTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EMQGSSAQQWLPRPL*QHLRSTSHPPPSPG Trigger: GCCTGGAGAAGGTGGCGGATGAGAAGTGGACCGAAGATGCTGCCACAGAGGACGAGGAAGCCACTGCTGGGCTGAGCTGCCCTGCATCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000171838.2 ENSMUST00000229231.2 |
||
| CDS GCA 90 bp | GCTTTCTGCTGGCTTGAGGCTGCAAGTTCCTGGACCCCTCGGAGCTaGTCTTTCAGGGGCTCCAGCTCGGCCTCACTCTGCTCCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AFCWLEAASSWTPRS*SFRGSSSASLCSLS Trigger: AGACAAGGAGCAGAGTGAGGCCGAGCTGGAGCCCCTGAAAGAGCAGCTCCGAGGGGTCCAGGAACTTGCAGCCTCAAGCCAGCAGAAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229231.2 |
||
| CDS CCA 90 bp | ACTGGGGGTACAGACTCAGCCCAGCAGTGGCTTCCTCGTCCTCTGTaGCAGCATCTTCGGTCCACTTCTCATCCGCCACCTTCTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TGGTDSAQQWLPRPL*QHLRSTSHPPPSPG Trigger: GCCTGGAGAAGGTGGCGGATGAGAAGTGGACCGAAGATGCTGCCACAGAGGACGAGGAAGCCACTGCTGGGCTGAGTCTGTACCCCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230035.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCAGAGAGAGAGAATGACAGCACTGGCCCTTTCTGCCCCAAGCCCCACACGGCTCATCCATGGGCCTaGGCTCTCGGAACTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PAERENDSTGPFCPKPHTAHPWA*ALGTGR Trigger: CCTTCCAGTTCCGAGAGCCAAGGCCCATGGATGAGC...CGTGTGGGGCTTGGGGCAGAAAGGGCCAGTGCTGTCATTCTCTCTCTCTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS GCA 90 bp | CTGCCATCAGGACTGACTTCTCATCTTCAGCCTCCGAGTCTGAGCTaGTGGCCTCCCCTGGACCTGAGAACTGGGGAGCAATGGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPSGLTSHLQPPSLS*WPPLDLRTGEQWVL Trigger: CAGCACCCATTGCTCCCCAGTTCTCAGGTCCAGGGGAGGCCAGCAGCTCAGACTCGGAGGCTGAAGATGAGAAGTCAGTCCTGATGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000171838.2 ENSMUST00000229231.2 |
||
| CDS CCA 90 bp | CCTGGCGGTTCACATACCGGAACTGGTAGAGTTGGGCTCCTGGTTTaGGCAGGTAGCTGGCTTGGAATTGGACACTGGCATGGGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGGSHTGTGRVGLLV*AGSWLGIGHWHGWG Trigger: CCCCCACCCATGCCAGTGTCCAATTCCAAGCCAGCTACCTGCCCAAACCAGGAGCCCAACTCTACCAGTTCCGGTATGTGAACCGCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 |
||
| CDS CCA 90 bp | CCGGCCCTGGCGGTTCACATACCGGAACTGGTAGAGTTGGGCTCCTaGTTTGGGCAGGTAGCTGGCTTGGAATTGGACACTGGCATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PALAVHIPELVELGS*FGQVAGLELDTGMG Trigger: ACCCATGCCAGTGTCCAATTCCAAGCCAGCTACCTGCCCAAACCAGGAGCCCAACTCTACCAGTTCCGGTATGTGAACCGCCAGGGCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 |
||
| CDS CCA 90 bp | CTGGCCTCCCCTGGACCTGAGAACTGGGGAGCAATGGGTGCTGGTTaGTTGATGACAACAAGAGAAGAAGGCTCCCGAGGCCCAGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LASPGPENWGAMGAG*LMTTREEGSRGPGG Trigger: TCCTCCTGGGCCTCGGGAGCCTTCTTCTCTTGTTGTCATCAACCAACCAGCACCCATTGCTCCCCAGTTCTCAGGTCCAGGGGAGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000171838.2 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCTTCTTGCCGGCTCTaGGCCTCCTCCAGCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GRENVKPPGVCGGSLAFLSSCRL*ASSSSV Trigger: TACAGAGCTGGAGGAGGCCAAGAGCCGGCAAGAAGA...CAGGAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR CAA 90 bp | AGAATGACAGCACTGGCCCTTTCTGCCCCAAGCCCCACACGCCAGGCAGAGTTGCTGGACCTGAGCACCTaGCTCTTCTTGCCGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RMTALALSAPSPTRQAELLDLST*LFLPAL Trigger: AAGAGCCGGCAAGAAGAGCAAGGTGCTCAGGTCCAG...CAACTCTGCCTGGCGTGTGGGGCTTGGGGCAGAAAGGGCCAGTGCTGTCATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCAGAGAGAGAGAATGACAGCACTGGCCCTTTCTGCCCCAAGCCCCACACGCACTTTCTGCTGGGCTaGGCCCAGGGTGTCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PAERENDSTGPFCPKPHTHFLLG*AQGVLH Trigger: ATGAAGGACACCCTGGGCCAAGCCCAGCAGAAAGTG...CGTGTGGGGCTTGGGGCAGAAAGGGCCAGTGCTGTCATTCTCTCTCTCTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS TCA 90 bp | CCACCTTGGTGTTGGGGATGTAGGTGCGGGCCACATTCAGGAAGTTaGCTCCACCCCGGGATGGTGCCCGGCTTAGTGATGACTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPWCWGCRCGPHSGS*LHPGMVPGLVMTLP Trigger: TGGAAGAGTCATCACTAAGCCGGGCACCATCCCGGGGTGGAGTCAACTTCCTGAATGTGGCCCGCACCTACATCCCCAACACCAAGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 ENSMUST00000229231.2 ENSMUST00000229398.2 ENSMUST00000230035.2 |
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| CDS-3UTR CAA 90 bp | GGCGTTCCTGTCAACCACACTGGTACCTTCTCTTGGCTGAGCCAAGAAGGGGGACCGGAACTGGTAGAGTaGGGCTCCTGGTTTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVPVNHTGTFSWLSQEGGPELVE*GSWFGQ Trigger: CTGCCCAAACCAGGAGCCCAACTCTACCAGTTCCGG...TCCCCCTTCTTGGCTCAGCCAAGAGAAGGTACCAGTGTGGTTGACAGGAACGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CAA 90 bp | CATCAGGTCATTCCGCTCCTGCTGGCTCTCATCCAGCTGGTTCTGAAGCACGGTCCGGAACTGGTAGAGTaGGGCTCCTGGTTTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HQVIPLLLALIQLVLKHGPELVE*GSWFGQ Trigger: CTGCCCAAACCAGGAGCCCAACTCTACCAGTTCCGG...ACCGTGCTTCAGAACCAGCTGGATGAGAGCCAGCAGGAGCGGAATGACCTGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCAACCACACTGGTACCTTCTCCCGCTTTCTGCTGGCTaGAGGCTGCAAGTTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGFVEGAWRSCQPHWYLLPLSAG*RLQVPG Trigger: TCCAGGAACTTGCAGCCTCAAGCCAGCAGAAAGCGG...GAGAAGGTACCAGTGTGGTTGACAGGAACGCCAGGCTCCCTCCACAAACCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS CCA 90 bp | CATACCGGAACTGGTAGAGTTGGGCTCCTGGTTTGGGCAGGTAGCTaGCTTGGAATTGGACACTGGCATGGGTGGGGGAGCCATCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HTGTGRVGLLVWAGS*LGIGHWHGWGSHQL Trigger: CAACTGATGGCTCCCCCACCCATGCCAGTGTCCAATTCCAAGCCAGCTACCTGCCCAAACCAGGAGCCCAACTCTACCAGTTCCGGTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 |
||
| CDS CCA 90 bp | AAGGTGAAAGGGTCCTGGGTGCTGAAGAAGAAATGCCCATCCATGTaGCCCTCTAGGGCGTCCTTGTCACTCTCAGCAGGGAAGCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KVKGSWVLKKKCPSM*PSRASLSLSAGKRS Trigger: GGAGCGCTTCCCTGCTGAGAGTGACAAGGACGCCCTAGAGGGCCACATGGATGGGCATTTCTTCTTCAGCACCCAGGACCCTTTCACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGGCAGGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTTCTTCTTGCCGGCTCTaGGCCTCCTCCAGCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GVAGVGFGASEGSDVCVCSSCRL*ASSSSV Trigger: TACAGAGCTGGAGGAGGCCAAGAGCCGGCAAGAAGA...ACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCCTGCCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
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| CDS-3UTR CAA 90 bp | GGGGTGGCAGGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTCTGGACCTGAGCACCTaGCTCTTCTTGCCGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GVAGVGFGASEGSDVCVCLDLST*LFLPAL Trigger: AAGAGCCGGCAAGAAGAGCAAGGTGCTCAGGTCCAG...ACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCCTGCCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS TCA 90 bp | TCCAGCAGTTCCTGTTTCTCCGTCTGCAACTGCTCCTTCTCCTTCTaGAGCACACGGAGGGCTGACCGTAGCTCTGTGAGCTCCCGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSCFSVCNCSFSF*STRRADRSSVSSRL Trigger: TAAGCGGGAGCTCACAGAGCTACGGTCAGCCCTCCGTGTGCTTCAGAAGGAGAAGGAGCAGTTGCAGACGGAGAAACAGGAACTGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 ENSMUST00000229231.2 ENSMUST00000230035.2 |
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| CDS CCA 90 bp | TCAGCCTCCGAGTCTGAGCTGCTGGCCTCCCCTGGACCTGAGAACTaGGGAGCAATGGGTGCTGGTTGGTTGATGACAACAAGAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SASESELLASPGPEN*GAMGAGWLMTTREE Trigger: TTCTTCTCTTGTTGTCATCAACCAACCAGCACCCATTGCTCCCCAGTTCTCAGGTCCAGGGGAGGCCAGCAGCTCAGACTCGGAGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000171838.2 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGGCAGGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGGGGAGCAGGACAATTaGGGCTCCACGGAAGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: GVAGVGFGASEGSDVCVCGEQDN*GSTEDE Trigger: TTCATCTTCCGTGGAGCCCAAATTGTCCTGCTCCCC...ACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCCTGCCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168112.8 |
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| CDS-3UTR CAA 90 bp | TGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTGTAGGAACACCGGAACTGGTAGAGTaGGGCTCCTGGTTTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WSCKAWDESRVQAWSVGTPELVE*GSWFGQ Trigger: CTGCCCAAACCAGGAGCCCAACTCTACCAGTTCCGG...TGTTCCTACAGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
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| CDS-3UTR CAA 90 bp | GGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTGTGTGTGTAGCTCATCCATGGGCCTaGGCTCTCGGAACTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVGFGASEGSDVCVCVCVAHPWA*ALGTGR Trigger: CCTTCCAGTTCCGAGAGCCAAGGCCCATGGATGAGC...TACACACACACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR CAA 90 bp | TGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTGTAGGAACACCGCTTTCTGCTGGCTaGAGGCTGCAAGTTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WSCKAWDESRVQAWSVGTPLSAG*RLQVPG Trigger: TCCAGGAACTTGCAGCCTCAAGCCAGCAGAAAGCGG...TGTTCCTACAGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
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| CDS-3UTR CAA 90 bp | GGAGGGAGAGAGAATGTGAAGCCACCTGGGGTTTGTGGAGGGAGCCTGGCGTTCATGGGTGCTGGTTGGTaGATGACAACAAGAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGRENVKPPGVCGGSLAFMGAGW*MTTREE Trigger: TTCTTCTCTTGTTGTCATCAACCAACCAGCACCCAT...GAACGCCAGGCTCCCTCCACAAACCCCAGGTGGCTTCACATTCTCTCTCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR CAA 90 bp | CTGGGGTTTGTGGAGGGAGCCTGGCGTTCCTGTCAACCACACTGGTACCTTCTCAGCAATGGGTGCTGGTaGGTTGATGACAACAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGFVEGAWRSCQPHWYLLSNGCW*VDDNKR Trigger: TCTCTTGTTGTCATCAACCAACCAGCACCCATTGCT...GAGAAGGTACCAGTGTGGTTGACAGGAACGCCAGGCTCCCTCCACAAACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR CAA 90 bp | GCTCCACCTCCTTCATCAGCACTTTGTCACTCATGGTCTGGATGTCATCCTCTAGCCACATTCAGGAAGTaGACTCCACCCCGGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: APPPSSALCHSWSGCHPLATFRK*TPPRDG Trigger: ACCATCCCGGGGTGGAGTCAACTTCCTGAATGTGGC...TAGAGGATGACATCCAGACCATGAGTGACAAAGTGCTGATGAAGGAGGTGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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| CDS-3UTR CAA 90 bp | GGACACCTGGGATCCCTTGTCCCCTATCCCTCACAGAAGGCACAAATACATTTTGGGCAGGTAGCTGGCTaGGAATTGGACACTGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GHLGSLVPYPSQKAQIHFGQVAG*ELDTGM Trigger: CATGCCAGTGTCCAATTCCAAGCCAGCTACCTGCCC...AAAATGTATTTGTGCCTTCTGTGAGGGATAGGGGACAAGGGATCCCAGGTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
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| CDS-3UTR CAA 90 bp | TTCCTTGTTCCTAACATGCCATCCTGGTCACTCTCTGTTCAAGCCTCTCCTATGGCCACATTCAGGAAGTaGACTCCACCCCGGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: FLVPNMPSWSLSVQASPMATFRK*TPPRDG Trigger: ACCATCCCGGGGTGGAGTCAACTTCCTGAATGTGGC...CATAGGAGAGGCTTGAACAGAGAGTGACCAGGATGGCATGTTAGGAACAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR CAA 90 bp | AGGAAGTCAGGGATGAGCAACATCTCTAGCATAGCCAGACAGATGCTCTGGATGTGGGGGAGCCATCAGTaGTACTTTCTGGCACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKSGMSNISSIARQMLWMWGSHQ*YFLALR Trigger: CCTCAGTGCCAGAAAGTACAACTGATGGCTCCCCCA...CATCCAGAGCATCTGTCTGGCTATGCTAGAGATGTTGCTCATCCCTGACTTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
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| CDS-3UTR CAA 90 bp | GATGGAAGATGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTCAGGAGGAGAGGAGCTaGTGTTTCCACTCTCACACA | + |
|
Preference number: 5 (lower is better) Translates to: DGRWSCKAWDESRVQAWSQEERS*CFHSHT Trigger: TGTGTGAGAGTGGAAACACAAGCTCCTCTCCTCCTG...AGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCATCTTCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| CDS-3UTR CAA 90 bp | GGGGTGGCAGGAGTTGGCTTTGGGGCATCAGAAGGGAGTGATGTGTGTGTGTGTATGGGTGCTGGTTGGTaGATGACAACAAGAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GVAGVGFGASEGSDVCVCMGAGW*MTTREE Trigger: TTCTTCTCTTGTTGTCATCAACCAACCAGCACCCAT...ACACACACACACATCACTCCCTTCTGATGCCCCAAAGCCAACTCCTGCCACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 |
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| CDS-3UTR CAA 90 bp | CAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGGCCACATTCAGGAAGTaGACTCCACCCCGGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: QKSKLSHCFQDRLLLGTKATFRK*TPPRDG Trigger: ACCATCCCGGGGTGGAGTCAACTTCCTGAATGTGGC...CTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
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| CDS-3UTR CAA 90 bp | GTCTGCTGCCTAATGGGGCTGAAAATGAGTCTGACACTGTTCTTCATCTTCCTGTCTCAGGAGCTTCTCTaGTTCCCGTGTCAGGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VCCLMGLKMSLTLFFIFLSQELL*FPCQGL Trigger: AAGGCCCTGACACGGGAACAAGAGAAGCTCCTGAGA...CAGGAAGATGAAGAACAGTGTCAGACTCATTTTCAGCCCCATTAGGCAGCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGCCGCTTTCTGCTGGCTaGAGGCTGCAAGTTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QKSKLSHCFQDRLLLGTKPLSAG*RLQVPG Trigger: TCCAGGAACTTGCAGCCTCAAGCCAGCAGAAAGCGG...CTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACTCAGCCAGTCGGCCGTaGACTTCAGCCACCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PGSSKPFQKSKLSHCFQDSASRP*TSATSS Trigger: ACTGGAGGTGGCTGAAGTCAACGGCCGACTGGCTGA...GTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCTCAGCCAGTCGGCCGTaGACTTCAGCCACCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SILVPLNLFRKVNSATASSASRP*TSATSS Trigger: ACTGGAGGTGGCTGAAGTCAACGGCCGACTGGCTGA...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCGCAGGGAAGCGCTCCTaGCAGATGGGACACTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NCGNNSIPARESHLHPGSAGKRS*QMGHSF Trigger: GAAGGAGTGTCCCATCTGCAAGGAGCGCTTCCCTGC...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCGCAGGGAAGCGCTCCTaGCAGATGGGACACTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SILVPLNLFRKVNSATASAGKRS*QMGHSF Trigger: GAAGGAGTGTCCCATCTGCAAGGAGCGCTTCCCTGC...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGACCCTCTAGGGCGTCCTaGTCACTCTCAGCAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RKVNSATASKTDCCLGQRPSRAS*SLSAGK Trigger: CTTCCCTGCTGAGAGTGACAAGGACGCCCTAGAGGG...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCCCCTCTAGGGCGTCCTaGTCACTCTCAGCAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SILVPLNLFRKVNSATASPSRAS*SLSAGK Trigger: CTTCCCTGCTGAGAGTGACAAGGACGCCCTAGAGGG...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | AATTGTGGGAATAATTCTATTCCCGCAAGGGAAAGTCATCTCCATCCTGGTTCCCCCTCTAGGGCGTCCTaGTCACTCTCAGCAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NCGNNSIPARESHLHPGSPSRAS*SLSAGK Trigger: CTTCCCTGCTGAGAGTGACAAGGACGCCCTAGAGGG...GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCACAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGTTGTAAGGCTTGGGATGAAAGCAGGGTGCAGGCATGGTCTGTAGGAACATCCTTCATCAGCACTTaGTCACTCATGGTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: WSCKAWDESRVQAWSVGTSFIST*SLMVWM Trigger: CATCCAGACCATGAGTGACAAAGTGCTGATGAAGGA...TGTTCCTACAGACCATGCCTGCACCCTGCTTTCATCCCAAGCCTTACAACTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCCACTTTCTGCTGGGCTaGGCCCAGGGTGTCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SILVPLNLFRKVNSATASHFLLG*AQGVLH Trigger: ATGAAGGACACCCTGGGCCAAGCCCAGCAGAAAGTG...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR CAA 90 bp | GTCTGCTGCCTAATGGGGCTGAAAATGAGTCTGACACTGTTCTTCATCTTCCTGCAGGAGGAGAGGAGCTaGTGTTTCCACTCTCACACA | + |
|
Preference number: 5 (lower is better) Translates to: VCCLMGLKMSLTLFFIFLQEERS*CFHSHT Trigger: TGTGTGAGAGTGGAAACACAAGCTCCTCTCCTCCTG...CAGGAAGATGAAGAACAGTGTCAGACTCATTTTCAGCCCCATTAGGCAGCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCGCAGGGAAGCGCTCCTaGCAGATGGGACACTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLNLFRKVNSATASKTDCAGKRS*QMGHSF Trigger: GAAGGAGTGTCCCATCTGCAAGGAGCGCTTCCCTGC...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGGCTCATCCATGGGCCTaGGCTCTTGGAATTGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: QKSKLSHCFQDRLLLGTKAHPWA*ALGIGH Trigger: GTGTCCAATTCCAAGAGCCAAGGCCCATGGATGAGC...CTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGATGGGGGAGCCATCAGTaGTACTTTCTGGCACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKVNSATASKTDCCLGQRWGSHQ*YFLALR Trigger: CCTCAGTGCCAGAAAGTACAACTGATGGCTCCCCCA...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCTCTCAGGAGCTTCTCTaGTTCCCGTGTCAGGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SILVPLNLFRKVNSATASSQELL*FPCQGL Trigger: AAGGCCCTGACACGGGAACAAGAGAAGCTCCTGAGA...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTTCATGTGGGCCAGCTaGTCCTTCAGTCGCTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: PLNLFRKVNSATASKTDCFMWAS*SFSRWT Trigger: GGTCCAGCGACTGAAGGACAAGCTGGCCCACATGAA...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023818.11 |
||
| CDS-3UTR CAA 90 bp | CGTCTGCTGCCTAATGGGGCTGAAAATGAGTCTGACACTGTTCTTCATCTTCCTTCCTTCATCAGCACTTaGTCACTCATGGTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RLLPNGAENESDTVLHLPSFIST*SLMVWM Trigger: CATCCAGACCATGAGTGACAAAGTGCTGATGAAGGA...AGGAAGATGAAGAACAGTGTCAGACTCATTTTCAGCCCCATTAGGCAGCAGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTCTCAGGAGCTTCTCTaGTTCCCGTGTCAGGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLNLFRKVNSATASKTDCSQELL*FPCQGL Trigger: AAGGCCCTGACACGGGAACAAGAGAAGCTCCTGAGA...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTCTGTTCAAGCCTCTCCTATGGCTTCTTCTGCTTAAAATATTCTCCAGATTTCATGTGGGCCAGCTaGTCCTTCAGTCGCTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TLCSSLSYGFFCLKYSPDFMWAS*SFSRWT Trigger: GGTCCAGCGACTGAAGGACAAGCTGGCCCACATGAA...ATCTGGAGAATATTTTAAGCAGAAGAAGCCATAGGAGAGGCTTGAACAGAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171838.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGACAGGAGGAGAGGAGCTaGTGTTTCCACTCTCACACA | + |
|
Preference number: 5 (lower is better) Translates to: RKVNSATASKTDCCLGQRQEERS*CFHSHT Trigger: TGTGTGAGAGTGGAAACACAAGCTCCTCTCCTCCTG...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCCATGGGCCTTGGCTCTaGGAATTGGACACTGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: PLNLFRKVNSATASKTDCHGPWL*ELDTGM Trigger: CATGCCAGTGTCCAATTCCAAGAGCCAAGGCCCATG...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGCAGGAGGAGAGGAGCTaGTGTTTCCACTCTCACACA | + |
|
Preference number: 5 (lower is better) Translates to: ILVPLNLFRKVNSATASKQEERS*CFHSHT Trigger: TGTGTGAGAGTGGAAACACAAGCTCCTCTCCTCCTG...CTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGAAGCAATGGGTGCTGGTaGGTTGATGACAACAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKVNSATASKTDCCLGQRSNGCW*VDDNKR Trigger: TCTCTTGTTGTCATCAACCAACCAGCACCCATTGCT...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAGCAATGGGTGCTGGTaGGTTGATGACAACAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SILVPLNLFRKVNSATASSNGCW*VDDNKR Trigger: TCTCTTGTTGTCATCAACCAACCAGCACCCATTGCT...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTCCTTCATCAGCACTTaGTCACTCATGGTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PLNLFRKVNSATASKTDCSFIST*SLMVWM Trigger: CATCCAGACCATGAGTGACAAAGTGCTGATGAAGGA...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | TCCATCCTGGTTCCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCATGGGTGCTGGTTGGTaGATGACAACAAGAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SILVPLNLFRKVNSATASMGAGW*MTTREE Trigger: TTCTTCTCTTGTTGTCATCAACCAACCAGCACCCAT...GGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGGAACCAGGATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCTGCTTGGGACAAAGAATGGGTGCTGGTTGGTaGATGACAACAAGAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RKVNSATASKTDCCLGQRMGAGW*MTTREE Trigger: TTCTTCTCTTGTTGTCATCAACCAACCAGCACCCAT...TCTTTGTCCCAAGCAGCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTAAACCTTTTCAGAAAAGTAAACTCAGCCACTGCTTCCAAGACAGATTGCAGCAATGGGTGCTGGTaGGTTGATGACAACAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLNLFRKVNSATASKTDCSNGCW*VDDNKR Trigger: TCTCTTGTTGTCATCAACCAACCAGCACCCATTGCT...GCAATCTGTCTTGGAAGCAGTGGCTGAGTTTACTTTTCTGAAAAGGTTTAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS GCA 72 bp | GCACTGGCCAACTCCTCCCCAAGGAGGGCCGCTTTCTaGTGGCTTGAGGCTGCAAGTTCCTGGACCCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: ALANSSPRRAAF*WLEAASSWTPR Trigger: CCGAGGGGTCCAGGAACTTGCAGCCTCAAGCCAGCAGAAAGCGGCCCTCCTTGGGGAGGAGTTGGCCAGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 ENSMUST00000229231.2 ENSMUST00000230035.2 |
||
| CDS CCA 72 bp | CTGGCCAACTCCTCCCCAAGGAGGGCCGCTTTCTGCTaGCTTGAGGCTGCAAGTTCCTGGACCCCTCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LANSSPRRAAFC*LEAASSWTPRS Trigger: GCTCCGAGGGGTCCAGGAACTTGCAGCCTCAAGCCAGCAGAAAGCGGCCCTCCTTGGGGAGGAGTTGGCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 ENSMUST00000229231.2 ENSMUST00000230035.2 |
||
| CDS TCA 72 bp | CAACTCCTCCCCAAGGAGGGCCGCTTTCTGCTGGCTTaGGGCTGCAAGTTCCTGGACCCCTCGGAGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QLLPKEGRFLLA*GCKFLDPSELL Trigger: GAGCAGCTCCGAGGGGTCCAGGAACTTGCAGCCTCAAGCCAGCAGAAAGCGGCCCTCCTTGGGGAGGAGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 ENSMUST00000229231.2 ENSMUST00000230035.2 |
||
| CDS GCA 72 bp | TGGCTTGAGGCTGCAAGTTCCTGGACCCCTCGGAGCTaGTCTTTCAGGGGCTCCAGCTCGGCCTCACTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WLEAASSWTPRS*SFRGSSSASLC Trigger: GCAGAGTGAGGCCGAGCTGGAGCCCCTGAAAGAGCAGCTCCGAGGGGTCCAGGAACTTGCAGCCTCAAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229231.2 |
||
| CDS CCA 72 bp | AGGGCCGCTTTCTGCTGGCTTGAGGCTGCAAGTTCCTaGACCCCTCGGAGCTGCTCTTTCAGGGGCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAAFCWLEAASS*TPRSCSFRGSS Trigger: GCTGGAGCCCCTGAAAGAGCAGCTCCGAGGGGTCCAGGAACTTGCAGCCTCAAGCCAGCAGAAAGCGGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 ENSMUST00000229231.2 ENSMUST00000230035.2 |
||
| CDS CAA 90 bp | TGGCCCTCTAGGGCGTCCTTGTCACTCTCAGCAGGGAAGCGCTCCTaGCAGATGGGACACTCCTTCCATGGAGGGTTGGCTGGGACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WPSRASLSLSAGKRS*QMGHSFHGGLAGTP Trigger: TGGGGTCCCAGCCAACCCTCCATGGAAGGAGTGTCCCATCTGCAAGGAGCGCTTCCCTGCTGAGAGTGACAAGGACGCCCTAGAGGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS CAA 90 bp | CCCACACACCCGGCCCTGGCGGTTCACATACCGGAACTGGTAGAGTaGGGCTCCTTGGAATTGGACACTGGCATGGGTGGGGGAGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: PTHPALAVHIPELVE*GSLELDTGMGGGAI Trigger: GATGGCTCCCCCACCCATGCCAGTGTCCAATTCCAAGGAGCCCAACTCTACCAGTTCCGGTATGTGAACCGCCAGGGCCGGGTGTGTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230035.2 |
||
| CDS GCA 72 bp | TGGCTTGAGGCTGCAAGTTCCTGGACCCCTCGGAGCTaGTCTTTCAGGGGCTCCAGCTCGGCCACTTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WLEAASSWTPRS*SFRGSSSATFC Trigger: GCAGAAAGTGGCCGAGCTGGAGCCCCTGAAAGAGCAGCTCCGAGGGGTCCAGGAACTTGCAGCCTCAAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 ENSMUST00000230035.2 |
||
| CDS CCA 72 bp | GGCAGCTCAGCCCAGCAGTGGCTTCCTCGTCCTCTGTaGCAGCATCTTCGGTCCACTTCTCATCCGCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: GSSAQQWLPRPL*QHLRSTSHPPP Trigger: AGGTGGCGGATGAGAAGTGGACCGAAGATGCTGCCACAGAGGACGAGGAAGCCACTGCTGGGCTGAGCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000171838.2 ENSMUST00000229231.2 |
||
| CDS CCA 72 bp | CCTTGTCACTCTCAGCAGGGAAGCGCTCCTTGCAGATaGGACACTCCTTCCATGGAGGGTTGGCTGGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: PCHSQQGSAPCR*DTPSMEGWLGP Trigger: GGGTCCCAGCCAACCCTCCATGGAAGGAGTGTCCCATCTGCAAGGAGCGCTTCCCTGCTGAGAGTGACAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS CAA 72 bp | CCGGCCCTGGCGGTTCACATACCGGAACTGGTAGAGTaGGGCTCCTGGTTTGGGCAGGTAGCTGGCTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PALAVHIPELVE*GSWFGQVAGLE Trigger: TTCCAAGCCAGCTACCTGCCCAAACCAGGAGCCCAACTCTACCAGTTCCGGTATGTGAACCGCCAGGGCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 |
||
| CDS CAA 72 bp | TCCTTCATGTGCAGGCTGAGCTCAGCCAGTCGGCCGTaGACTTCAGCCACCTCCAGTCGGCTGCGGTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: SFMCRLSSASRP*TSATSSRLRCS Trigger: ACTACACCGCAGCCGACTGGAGGTGGCTGAAGTCAACGGCCGACTGGCTGAGCTCAGCCTGCACATGAAGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 ENSMUST00000229231.2 ENSMUST00000230035.2 |
||
| CDS CAA 72 bp | CTCCAGGGTCACCAGCTCATCCATGGGCCTTGGCTCTaGGAATTGGACACTGGCATGGGTGGGGGAGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: LQGHQLIHGPWL*ELDTGMGGGAI Trigger: GATGGCTCCCCCACCCATGCCAGTGTCCAATTCCAAGAGCCAAGGCCCATGGATGAGCTGGTGACCCTGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229231.2 |
||
| CDS CAA 72 bp | CCGGCCCTGGCGGTTCACATACCGGAACTGGTAGAGTaGGGCTCCTTGGAATTGGACACTGGCATGGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PALAVHIPELVE*GSLELDTGMGG Trigger: CCCACCCATGCCAGTGTCCAATTCCAAGGAGCCCAACTCTACCAGTTCCGGTATGTGAACCGCCAGGGCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230035.2 |
||
| CDS CAA 90 bp | CCCACACACCCGGCCCTGGCGGTTCACATACCGGAACTGGTAGAGTaGGGCTCCTGGTTTGGGCAGGTAGCTGGCTTGGAATTGGACACT | + |
|
Preference number: 6 (lower is better) Translates to: PTHPALAVHIPELVE*GSWFGQVAGLELDT Trigger: AGTGTCCAATTCCAAGCCAGCTACCTGCCCAAACCAGGAGCCCAACTCTACCAGTTCCGGTATGTGAACCGCCAGGGCCGGGTGTGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 |
||
| CDS CAA 90 bp | GCCTCCCCTGGACCTGAGAACTGGGGAGCAATGGGTGCTGGTTGGTaGATGACAACAAGAGAAGAAGGCTCCCGAGGCCCAGGAGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ASPGPENWGAMGAGW*MTTREEGSRGPGGE Trigger: CTCTCCTCCTGGGCCTCGGGAGCCTTCTTCTCTTGTTGTCATCAACCAACCAGCACCCATTGCTCCCCAGTTCTCAGGTCCAGGGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000171838.2 ENSMUST00000229231.2 |
||
| CDS TCA 72 bp | TGTTGGGGATGTAGGTGCGGGCCACATTCAGGAAGTTaGCTCCACCCCGGGATGGTGCCCGGCTTAGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: CWGCRCGPHSGS*LHPGMVPGLVM Trigger: CATCACTAAGCCGGGCACCATCCCGGGGTGGAGTCAACTTCCTGAATGTGGCCCGCACCTACATCCCCAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 ENSMUST00000229231.2 ENSMUST00000229398.2 ENSMUST00000230035.2 |
||
| CDS GCA 72 bp | TCAGGAAGCAGGAGGCTGGCTTCCTCGCCCCCACTCTaGACCGCTGCCATCAGGACTGACTTCTCATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGSRRLASSPPL*TAAIRTDFSSS Trigger: TGAAGATGAGAAGTCAGTCCTGATGGCAGCGGTGCAGAGTGGGGGCGAGGAAGCCAGCCTCCTGCTTCCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000171838.2 ENSMUST00000229231.2 |
||
| CDS CCA 72 bp | ACTGGTAGAGTTGGGCTCCTGGTTTGGGCAGGTAGCTaGCTTGGAATTGGACACTGGCATGGGTGGGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TGRVGLLVWAGS*LGIGHWHGWGS Trigger: GCTCCCCCACCCATGCCAGTGTCCAATTCCAAGCCAGCTACCTGCCCAAACCAGGAGCCCAACTCTACCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 |
||
| CDS CCA 72 bp | GGGTCCTGGGTGCTGAAGAAGAAATGCCCATCCATGTaGCCCTCTAGGGCGTCCTTGTCACTCTCAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSWVLKKKCPSM*PSRASLSLSAG Trigger: CCCTGCTGAGAGTGACAAGGACGCCCTAGAGGGCCACATGGATGGGCATTTCTTCTTCAGCACCCAGGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS CCA 72 bp | ACAGACTCAGCCCAGCAGTGGCTTCCTCGTCCTCTGTaGCAGCATCTTCGGTCCACTTCTCATCCGCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: TDSAQQWLPRPL*QHLRSTSHPPP Trigger: AGGTGGCGGATGAGAAGTGGACCGAAGATGCTGCCACAGAGGACGAGGAAGCCACTGCTGGGCTGAGTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230035.2 |
||
| CDS CAA 72 bp | GTAGAGTTGGGCTCCTGGTTTGGGCAGGTAGCTGGCTaGGAATTGGACACTGGCATGGGTGGGGGAGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: VELGSWFGQVAG*ELDTGMGGGAI Trigger: GATGGCTCCCCCACCCATGCCAGTGTCCAATTCCAAGCCAGCTACCTGCCCAAACCAGGAGCCCAACTCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 |
||
| CDS CAA 72 bp | AGGGCGTCCTTGTCACTCTCAGCAGGGAAGCGCTCCTaGCAGATGGGACACTCCTTCCATGGAGGGTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RASLSLSAGKRS*QMGHSFHGGLA Trigger: AGCCAACCCTCCATGGAAGGAGTGTCCCATCTGCAAGGAGCGCTTCCCTGCTGAGAGTGACAAGGACGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS CAA 90 bp | CACTTTTCCTCCTTCATGTGCAGGCTGAGCTCAGCCAGTCGGCCGTaGACTTCAGCCACCTCCAGTCGGCTGCGGTGTAGTTCAGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: HFSSFMCRLSSASRP*TSATSSRLRCSSAM Trigger: CATAGCTGAACTACACCGCAGCCGACTGGAGGTGGCTGAAGTCAACGGCCGACTGGCTGAGCTCAGCCTGCACATGAAGGAGGAAAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 ENSMUST00000229231.2 ENSMUST00000230035.2 |
||
| CDS CAA 90 bp | GTGCTGAAGAAGAAATGCCCATCCATGTGGCCCTCTAGGGCGTCCTaGTCACTCTCAGCAGGGAAGCGCTCCTTGCAGATGGGACACTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLKKKCPSMWPSRAS*SLSAGKRSLQMGHS Trigger: GGAGTGTCCCATCTGCAAGGAGCGCTTCCCTGCTGAGAGTGACAAGGACGCCCTAGAGGGCCACATGGATGGGCATTTCTTCTTCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS TCA 72 bp | TCCTGTTTCTCCGTCTGCAACTGCTCCTTCTCCTTCTaGAGCACACGGAGGGCTGACCGTAGCTCTGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCFSVCNCSFSF*STRRADRSSVS Trigger: GCTCACAGAGCTACGGTCAGCCCTCCGTGTGCTTCAGAAGGAGAAGGAGCAGTTGCAGACGGAGAAACAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 ENSMUST00000229231.2 ENSMUST00000230035.2 |
||
| CDS CCA 72 bp | CCTGGACCTGAGAACTGGGGAGCAATGGGTGCTGGTTaGTTGATGACAACAAGAGAAGAAGGCTCCCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGPENWGAMGAG*LMTTREEGSRG Trigger: GCCTCGGGAGCCTTCTTCTCTTGTTGTCATCAACCAACCAGCACCCATTGCTCCCCAGTTCTCAGGTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000171838.2 ENSMUST00000229231.2 |
||
| CDS CAA 72 bp | AAGAAATGCCCATCCATGTGGCCCTCTAGGGCGTCCTaGTCACTCTCAGCAGGGAAGCGCTCCTTGCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: KKCPSMWPSRAS*SLSAGKRSLQM Trigger: CATCTGCAAGGAGCGCTTCCCTGCTGAGAGTGACAAGGACGCCCTAGAGGGCCACATGGATGGGCATTTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
||
| CDS CCA 72 bp | GCGGTTCACATACCGGAACTGGTAGAGTTGGGCTCCTaGTTTGGGCAGGTAGCTGGCTTGGAATTGGACACT | + |
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Preference number: 6 (lower is better) Translates to: AVHIPELVELGS*FGQVAGLELDT Trigger: AGTGTCCAATTCCAAGCCAGCTACCTGCCCAAACCAGGAGCCCAACTCTACCAGTTCCGGTATGTGAACCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 |
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| CDS GCA 72 bp | TCAAAGGTGAAAGGGTCCTGGGTGCTGAAGAAGAAATaGCCATCCATGTGGCCCTCTAGGGCGTCCTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SKVKGSWVLKKK*PSMWPSRASLS Trigger: TGACAAGGACGCCCTAGAGGGCCACATGGATGGGCATTTCTTCTTCAGCACCCAGGACCCTTTCACCTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023818.11 ENSMUST00000168112.8 ENSMUST00000229231.2 |
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| CDS CCA 72 bp | TCACATACCGGAACTGGTAGAGTTGGGCTCCTGGTTTaGGCAGGTAGCTGGCTTGGAATTGGACACTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SHTGTGRVGLLV*AGSWLGIGHWH Trigger: ATGCCAGTGTCCAATTCCAAGCCAGCTACCTGCCCAAACCAGGAGCCCAACTCTACCAGTTCCGGTATGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023818.11 ENSMUST00000171838.2 |
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| CDS CCA 72 bp | TCACATACCGGAACTGGTAGAGTTGGGCTCCTGGTTTaGGCAGGTAGCTGGCTTAAAAATGCCAATCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SHTGTGRVGLLV*AGSWLKNANPV Trigger: GACTGGATTGGCATTTTTAAGCCAGCTACCTGCCCAAACCAGGAGCCCAACTCTACCAGTTCCGGTATGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229398.2 |
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