Pregenerated sensors for CALB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003657Ensembl transcript IDs: ENSMUST00000003754.8, ENSMUST00000212297.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTCACCCTCCACAGTAGCTCTGAGAAGACAGCTAGATCATTAAGCAAGCTGGTGGCTGGTGTGTGCAGGTaGCAGGGGGTGGGGAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: VTLHSSSEKTARSLSKLVAGVCR*QGVGRS Trigger: AGACCTCCCCACCCCCTGCCACCTGCACACACCAGC...CACCAGCTTGCTTAATGATCTAGCTGTCTTCTCAGAGCTACTGTGGAGGGTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCCACTCTGTGGGACTCAGAAGCCTAAATCATACAGCGAAGGAACTCATGCAGGGGGTGGGGAGGTCTaGGAAGGAGTGTCAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: SPLCGTQKPKSYSEGTHAGGGEV*EGVSRE Trigger: CTCTCTTGACACTCCTTCCCAGACCTCCCCACCCCC...TGCATGAGTTCCTTCGCTGTATGATTTAGGCTTCTGAGTCCCACAGAGTGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| 3UTR-3UTR GCA 90 bp | CACTTTATTCTCTGTAAACTCTTCTTTGGTAAACAAGAAGACAGGGGAAGCCAAGACAGAAGCTTCCCCTaGAGCCCCGCCCACCAACCG | + |
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Preference number: 2 (lower is better) Translates to: HFILCKLFFGKQEDRGSQDRSFP*SPAHQP Trigger: CGGTTGGTGGGCGGGGCTGCAGGGGAAGCTTCTGTC...TTGGCTTCCCCTGTCTTCTTGTTTACCAAAGAAGAGTTTACAGAGAATAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTTATTCTCTGTAAACTCTTCTTTGGTAAACAAGAAGACAGGGGAAGCCAAAGAAAGGGGGAGGGGTaGCGCAGCAAGAGGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: HFILCKLFFGKQEDRGSQRKGEG*RSKRKE Trigger: CTCCTTCCTCTTGCTGCGCCACCCCTCCCCCTTTCT...TTGGCTTCCCCTGTCTTCTTGTTTACCAAAGAAGAGTTTACAGAGAATAAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| 3UTR CCA 72 bp | ACAGCTAGATCATTAAGCAAGCTGGTGGGCAGAACCTaGAAGTCCGGGGTCAGCGGTGGACCGGGGAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: TARSLSKLVGRT*KSGVSGGPGRK Trigger: CTTTCTCCCCGGTCCACCGCTGACCCCGGACTTCCAGGTTCTGCCCACCAGCTTGCTTAATGATCTAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR GCA 90 bp | GGGAAGGAGTGTCAAGAGAGTCAGGACAGCGGGGGCGGGGTTCAAGGGAGGCGCCGCTCTTGGACATCATaGCAGAACCCTTCCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: GKECQESQDSGGGVQGRRRSWTS*QNPSLP Trigger: AGGCAAGGAAGGGTTCTGGCATGATGTCCAAGAGCG...GCGCCTCCCTTGAACCCCGCCCCCGCTGTCCTGACTCTCTTGACACTCCTTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR GCA 90 bp | GGCAGGGGGTGGGGAGGTCTGGGAAGGAGTGTCAAGAGAGTCAGGACAGCGGGGCTGGAGCCCACGTGCTaGCTGAAGCACAAAAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: GRGWGGLGRSVKRVRTAGLEPTC*LKHKRK Trigger: TTTCCTTTTGTGCTTCAGGCAGCACGTGGGCTCCAG...CCCCGCTGTCCTGACTCTCTTGACACTCCTTCCCAGACCTCCCCACCCCCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR CCA 90 bp | GGCAGGGGGTGGGGAGGTCTGGGAAGGAGTGTCAAGAGAGTCAGGACAGCGGGGCATCATAGGGCCTGTTaGCCTTCTTCAGGAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GRGWGGLGRSVKRVRTAGHHRAC*PSSGGQ Trigger: CTGACCTCCTGAAGAAGGCCAACAGGCCCTATGATG...CCCCGCTGTCCTGACTCTCTTGACACTCCTTCCCAGACCTCCCCACCCCCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR TCA 90 bp | AAGCAAGCTGGTGGGCAGAACCTGGAAGTCCGGGGTCAGCGGTGGACCGGGGAGGGCATTGAACTCTTCTaGGGTCAGCTTCATACCCTG | + |
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Preference number: 4 (lower is better) Translates to: KQAGGQNLEVRGQRWTGEGIELF*GQLHTL Trigger: CAGGGTATGAAGCTGACCTCAGAAGAGTTCAATGCC...CTCCCCGGTCCACCGCTGACCCCGGACTTCCAGGTTCTGCCCACCAGCTTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR GCA 90 bp | CTGAACCCCTCGGTCATCCTTCTGGTCCCTCGTTGGTCCAGGTCACCAGCCTTTTTCCAGGAACTGGGATaGAGTCAGCTCGGCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LNPSVILLVPRWSRSPAFFQELG*SQLGQV Trigger: CACCTGGCCGAGCTGACTGCATCCCAGTTCCTGGAA...AAAGGCTGGTGACCTGGACCAACGAGGGACCAGAAGGATGACCGAGGGGTTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212297.2 |
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| CDS-3UTR CCA 90 bp | CCTGAACCCCTCGGTCATCCTTCTGGTCCCTCGTTGGTCCAGGTCACCAGCCTTCAGATTTCCAGGAACTaGGATGCAGTCAGCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: PEPLGHPSGPSLVQVTSLQISRN*DAVSSA Trigger: GGCCGAGCTGACTGCATCCCAGTTCCTGGAAATCTG...AAGGCTGGTGACCTGGACCAACGAGGGACCAGAAGGATGACCGAGGGGTTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212297.2 |
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| CDS-3UTR TCA 90 bp | AAGCAAGCTGGTGGGCAGAACCTGGAAGTCCGGGGTCAGCGGTGGACCGGGGAGGTCAGCTTCATACCCTaGAATTTCAGCAGGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: KQAGGQNLEVRGQRWTGEVSFIP*NFSRKF Trigger: GAACTTCCTGCTGAAATTTCAGGGTATGAAGCTGAC...CTCCCCGGTCCACCGCTGACCCCGGACTTCCAGGTTCTGCCCACCAGCTTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR TCA 90 bp | CGGTCATCCTTCTGGTCCCTCGTTGGTCCAGGTCACCAGCCTTTCCTGACGGCTAGCCCACGTGCTGCCTaGAGCACAAAAGGAAATTCT | + |
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Preference number: 4 (lower is better) Translates to: RSSFWSLVGPGHQPFLTASPRAA*STKGNS Trigger: AGAATTTCCTTTTGTGCTTCAGGCAGCACGTGGGCT...AGCCGTCAGGAAAGGCTGGTGACCTGGACCAACGAGGGACCAGAAGGATGACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212297.2 |
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| CDS-3UTR TCA 90 bp | CCCTCGGTCATCCTTCTGGTCCCTCGTTGGTCCAGGTCACCAGCCTTTCCTGACCAGACAGGAATCCCTTaGGCTCATTGGCTTCGATGT | + |
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Preference number: 4 (lower is better) Translates to: PSVILLVPRWSRSPAFPDQTGIP*AHWLRC Trigger: ACATCGAAGCCAATGAGCTCAAGGGATTCCTGTCTG...GTCAGGAAAGGCTGGTGACCTGGACCAACGAGGGACCAGAAGGATGACCGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212297.2 |
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| CDS-3UTR TCA 90 bp | ACCCCTCGGTCATCCTTCTGGTCCCTCGTTGGTCCAGGTCACCAGCCTTTCCTGGGCATTGAACTCTTCTaGGGTCAGCTTCATACCCTG | + |
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Preference number: 4 (lower is better) Translates to: TPRSSFWSLVGPGHQPFLGIELF*GQLHTL Trigger: CAGGGTATGAAGCTGACCTCAGAAGAGTTCAATGCC...CAGGAAAGGCTGGTGACCTGGACCAACGAGGGACCAGAAGGATGACCGAGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212297.2 |
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| CDS-3UTR TCA 90 bp | TGTCTATCAGGCCTAAGGAACCCTACCAGCCACCCTCTCTCCATCTCTCCTTTCCCTCGGCCAAGGACATaGCACTCTTCCTGTAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: CLSGLRNPTSHPLSISPFPRPRT*HSSCRW Trigger: CCACCTACAGGAAGAGTGTCATGTCCTTGGCCGAGG...GAAAGGAGAGATGGAGAGAGGGTGGCTGGTAGGGTTCCTTAGGCCTGATAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR GCA 90 bp | CCCTCGGTCATCCTTCTGGTCCCTCGTTGGTCCAGGTCACCAGCCTTTCCTGACCCGTCAGCATCAAAGTaGTTCCAGATTTCCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: PSVILLVPRWSRSPAFPDPSASK*FQISRN Trigger: GTTCCTGGAAATCTGGAAGCACTTTGATGCTGACGG...GTCAGGAAAGGCTGGTGACCTGGACCAACGAGGGACCAGAAGGATGACCGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212297.2 |
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| CDS-3UTR CCA 90 bp | AACCCCTCGGTCATCCTTCTGGTCCCTCGTTGGTCCAGGTCACCAGCCTTTCCTGCCTTCTCCAGCTCCTaGAAGAAGTTCTCTAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: NPSVILLVPRWSRSPAFPAFSSS*KKFSSS Trigger: AGAGCTAGAGAACTTCTTCCAGGAGCTGGAGAAGGC...AGGAAAGGCTGGTGACCTGGACCAACGAGGGACCAGAAGGATGACCGAGGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212297.2 |
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| CDS-3UTR CCA 90 bp | CTGAACCCCTCGGTCATCCTTCTGGTCCCTCGTTGGTCCAGGTCACCAGCCTTTATCCGTAGTATGGTCTaGGTGTACTCCTGGAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: LNPSVILLVPRWSRSPAFIRSMV*VYSWSL Trigger: TAAGCTCCAGGAGTACACCCAGACCATACTACGGAT...AAAGGCTGGTGACCTGGACCAACGAGGGACCAGAAGGATGACCGAGGGGTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212297.2 |
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| CDS-3UTR GCA 90 bp | AGATCATTAAGCAAGCTGGTGGGCAGAACCTGGAAGTCCGGGGTCAGCGGTGGACCGTCAGCATCAAAGTaGTTCCAGATTTCCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: RSLSKLVGRTWKSGVSGGPSASK*FQISRN Trigger: GTTCCTGGAAATCTGGAAGCACTTTGATGCTGACGG...TCCACCGCTGACCCCGGACTTCCAGGTTCTGCCCACCAGCTTGCTTAATGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR GCA 90 bp | AGTCCACTCTGTGGGACTCAGAAGCCTAAATCATACAGCGAAGGAACTCATGCATTCCAGGAACTGGGATaGAGTCAGCTCGGCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SPLCGTQKPKSYSEGTHAFQELG*SQLGQV Trigger: CACCTGGCCGAGCTGACTGCATCCCAGTTCCTGGAA...TGCATGAGTTCCTTCGCTGTATGATTTAGGCTTCTGAGTCCCACAGAGTGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR GCA 90 bp | TTAAGCAAGCTGGTGGGCAGAACCTGGAAGTCCGGGGTCAGCGGTGGACCGGGGTTCTTATCATACTTCTaGATGAACTCCTTCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSKLVGRTWKSGVSGGPGFLSYF*MNSFIF Trigger: GAAGATGAAGGAGTTCATGCAGAAGTATGATAAGAA...CCCCGGTCCACCGCTGACCCCGGACTTCCAGGTTCTGCCCACCAGCTTGCTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR GCA 90 bp | ACCCCTCGGTCATCCTTCTGGTCCCTCGTTGGTCCAGGTCACCAGCCTTTCCTGCTGAGAGACCCAATTTaGCATCTCCATTTAAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: TPRSSFWSLVGPGHQPFLLRDPI*HLHLSQ Trigger: TTGACTTAAATGGAGATGGCAAATTGGGTCTCTCAG...CAGGAAAGGCTGGTGACCTGGACCAACGAGGGACCAGAAGGATGACCGAGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212297.2 |
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| CDS-3UTR TCA 90 bp | TGTCTATCAGGCCTAAGGAACCCTACCAGCCACCCTCTCTCCATCTCTCCTTTCGAGTCTAGACATCTCTaGGAGACCCAATTTGCCATC | + |
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Preference number: 4 (lower is better) Translates to: CLSGLRNPTSHPLSISPFESRHL*ETQFAI Trigger: GATGGCAAATTGGGTCTCTCAGAGATGTCTAGACTC...GAAAGGAGAGATGGAGAGAGGGTGGCTGGTAGGGTTCCTTAGGCCTGATAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR CCA 90 bp | CACAACTGTCTATCAGGCCTAAGGAACCCTACCAGCCACCCTCTCTCCATCTCTATCCGTAGTATGGTCTaGGTGTACTCCTGGAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: HNCLSGLRNPTSHPLSISIRSMV*VYSWSL Trigger: TAAGCTCCAGGAGTACACCCAGACCATACTACGGAT...AGAGATGGAGAGAGGGTGGCTGGTAGGGTTCCTTAGGCCTGATAGACAGTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR CCA 90 bp | TCCACTTTATTCTCTGTAAACTCTTCTTTGGTAAACAAGAAGACAGGGGAAGCCCAGATTTCCAGGAACTaGGATGCAGTCAGCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: STLFSVNSSLVNKKTGEAQISRN*DAVSSA Trigger: GGCCGAGCTGACTGCATCCCAGTTCCTGGAAATCTG...GGCTTCCCCTGTCTTCTTGTTTACCAAAGAAGAGTTTACAGAGAATAAAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR GCA 90 bp | CACTTTATTCTCTGTAAACTCTTCTTTGGTAAACAAGAAGACAGGGGAAGCCAATCTGTAGAGCTTCCCTaGCTCGGCCAAGGACATGAC | + |
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Preference number: 4 (lower is better) Translates to: HFILCKLFFGKQEDRGSQSVELP*LGQGHD Trigger: GTCATGTCCTTGGCCGAGGCAGGGAAGCTCTACAGA...TTGGCTTCCCCTGTCTTCTTGTTTACCAAAGAAGAGTTTACAGAGAATAAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR TCA 90 bp | CACTTTATTCTCTGTAAACTCTTCTTTGGTAAACAAGAAGACAGGGGAAGCCAACAGACAGGAATCCCTTaGGCTCATTGGCTTCGATGT | + |
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Preference number: 4 (lower is better) Translates to: HFILCKLFFGKQEDRGSQQTGIP*AHWLRC Trigger: ACATCGAAGCCAATGAGCTCAAGGGATTCCTGTCTG...TTGGCTTCCCCTGTCTTCTTGTTTACCAAAGAAGAGTTTACAGAGAATAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR GCA 90 bp | TTGAAGTACTCGTATTTGTATGTGCCTACGCACATGAATAAATGCACAATAAGGCTGGAGCCCACGTGCTaGCTGAAGCACAAAAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LKYSYLYVPTHMNKCTIRLEPTC*LKHKRK Trigger: TTTCCTTTTGTGCTTCAGGCAGCACGTGGGCTCCAG...CCTTATTGTGCATTTATTCATGTGCGTAGGCACATACAAATACGAGTACTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212297.2 |
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| CDS-3UTR CCA 90 bp | CACTTTATTCTCTGTAAACTCTTCTTTGGTAAACAAGAAGACAGGGGAAGCCAAGCCTTCTCCAGCTCCTaGAAGAAGTTCTCTAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: HFILCKLFFGKQEDRGSQAFSSS*KKFSSS Trigger: AGAGCTAGAGAACTTCTTCCAGGAGCTGGAGAAGGC...TTGGCTTCCCCTGTCTTCTTGTTTACCAAAGAAGAGTTTACAGAGAATAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR TCA 90 bp | TTTATTCTCTGTAAACTCTTCTTTGGTAAACAAGAAGACAGGGGAAGCCAAAGAAGCCCACGTGCTGCCTaGAGCACAAAAGGAAATTCT | + |
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Preference number: 4 (lower is better) Translates to: FILCKLFFGKQEDRGSQRSPRAA*STKGNS Trigger: AGAATTTCCTTTTGTGCTTCAGGCAGCACGTGGGCT...TCTTTGGCTTCCCCTGTCTTCTTGTTTACCAAAGAAGAGTTTACAGAGAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR TCA 90 bp | TTGAAGTACTCGTATTTGTATGTGCCTACGCACATGAATAAATGCACAATAAGGGTCAGCTTCATACCCTaGAATTTCAGCAGGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: LKYSYLYVPTHMNKCTIRVSFIP*NFSRKF Trigger: GAACTTCCTGCTGAAATTTCAGGGTATGAAGCTGAC...CCTTATTGTGCATTTATTCATGTGCGTAGGCACATACAAATACGAGTACTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212297.2 |
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| CDS-3UTR GCA 90 bp | CACTTTATTCTCTGTAAACTCTTCTTTGGTAAACAAGAAGACAGGGGAAGCCAACTGAGAGACCCAATTTaGCATCTCCATTTAAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: HFILCKLFFGKQEDRGSQLRDPI*HLHLSQ Trigger: TTGACTTAAATGGAGATGGCAAATTGGGTCTCTCAG...TTGGCTTCCCCTGTCTTCTTGTTTACCAAAGAAGAGTTTACAGAGAATAAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR GCA 90 bp | TTGAAGTACTCGTATTTGTATGTGCCTACGCACATGAATAAATGCACAATAAGGTTCTTATCATACTTCTaGATGAACTCCTTCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LKYSYLYVPTHMNKCTIRFLSYF*MNSFIF Trigger: GAAGATGAAGGAGTTCATGCAGAAGTATGATAAGAA...CCTTATTGTGCATTTATTCATGTGCGTAGGCACATACAAATACGAGTACTTCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212297.2 |
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| CDS GCA 90 bp | ATTTCCGTCAGCATCAAAGTGCTTCCAGATTTCCAGGAACTGGGATaGAGTCAGCTCGGCCAGGTGCAGGTAAGGGGGCTGCTGCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: ISVSIKVLPDFQELG*SQLGQVQVRGLLLR Trigger: CCGCAGCAGCAGCCCCCTTACCTGCACCTGGCCGAGCTGACTGCATCCCAGTTCCTGGAAATCTGGAAGCACTTTGATGCTGACGGAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003754.8 ENSMUST00000212297.2 |
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| CDS GCA 90 bp | CTCACTGCAGAGCACAATCTCCAGGTCCTTTCTGTAGAGCTTCCCTaGCTCGGCCAAGGACATGACACTCTTCCTGTAGGTGGTGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LTAEHNLQVLSVELP*LGQGHDTLPVGGEL Trigger: CAGCTCACCACCTACAGGAAGAGTGTCATGTCCTTGGCCGAGGCAGGGAAGCTCTACAGAAAGGACCTGGAGATTGTGCTCTGCAGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR CAA 90 bp | CTGAACCCCTCGGTCATCCTTCTGGTCCCTCGTTGGTCCAGGTCACCAGCCTTTTCAGACAGGAATCCCTaGAGCTCATTGGCTTCGATG | + |
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Preference number: 5 (lower is better) Translates to: LNPSVILLVPRWSRSPAFSDRNP*SSLASM Trigger: CATCGAAGCCAATGAGCTCAAGGGATTCCTGTCTGA...AAAGGCTGGTGACCTGGACCAACGAGGGACCAGAAGGATGACCGAGGGGTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212297.2 |
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| CDS-3UTR CAA 90 bp | CCCTCGGTCATCCTTCTGGTCCCTCGTTGGTCCAGGTCACCAGCCTTTCCTGACTCTCTGGCCTCCTTCTaGTTCTTCTCATACAGATCC | + |
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Preference number: 5 (lower is better) Translates to: PSVILLVPRWSRSPAFPDSLASF*FFSYRS Trigger: GGATCTGTATGAGAAGAACAAGAAGGAGGCCAGAGA...GTCAGGAAAGGCTGGTGACCTGGACCAACGAGGGACCAGAAGGATGACCGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212297.2 |
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| CDS-3UTR CAA 90 bp | CCCTCGGTCATCCTTCTGGTCCCTCGTTGGTCCAGGTCACCAGCCTTTCCTGACATCTTCTCTCCAAAATaGTCGCTCTTGGACATCATG | + |
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Preference number: 5 (lower is better) Translates to: PSVILLVPRWSRSPAFPDIFSPK*SLLDIM Trigger: CATGATGTCCAAGAGCGACAATTTTGGAGAGAAGAT...GTCAGGAAAGGCTGGTGACCTGGACCAACGAGGGACCAGAAGGATGACCGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212297.2 |
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| CDS-3UTR CAA 90 bp | CTCCACAGTAGCTCTGAGAAGACAGCTAGATCATTAAGCAAGCTGGTGGGCAGAGTAGGTGGTGAGCTGTaGGATGTTCATCTCCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LHSSSEKTARSLSKLVGRVGGEL*DVHLLL Trigger: AAGAAGGAGATGAACATCCAACAGCTCACCACCTAC...TCTGCCCACCAGCTTGCTTAATGATCTAGCTGTCTTCTCAGAGCTACTGTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR CAA 90 bp | GGCGCAGCAAGAGGAAGGAGTCCACTCTGTGGGACTCAGAAGCCTAAATCATACATGTTCATCTCCTTCTaGTTCTTCTCATACAGATCC | + |
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Preference number: 5 (lower is better) Translates to: GAARGRSPLCGTQKPKSYMFISF*FFSYRS Trigger: GGATCTGTATGAGAAGAACAAGAAGGAGATGAACAT...GTATGATTTAGGCTTCTGAGTCCCACAGAGTGGACTCCTTCCTCTTGCTGCGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR CAA 90 bp | CTCCACAGTAGCTCTGAGAAGACAGCTAGATCATTAAGCAAGCTGGTGGGCAGAATCTTCTCTCCAAAATaGTCGCTCTTGGACATCATG | + |
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Preference number: 5 (lower is better) Translates to: LHSSSEKTARSLSKLVGRIFSPK*SLLDIM Trigger: CATGATGTCCAAGAGCGACAATTTTGGAGAGAAGAT...TCTGCCCACCAGCTTGCTTAATGATCTAGCTGTCTTCTCAGAGCTACTGTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS-3UTR CAA 90 bp | AGTAGCTCTGAGAAGACAGCTAGATCATTAAGCAAGCTGGTGGGCAGAACCTGGTCTGAGAGACCCAATTaGCCATCTCCATTTAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: SSSEKTARSLSKLVGRTWSERPN*PSPFKS Trigger: TGACTTAAATGGAGATGGCAAATTGGGTCTCTCAGA...CCAGGTTCTGCCCACCAGCTTGCTTAATGATCTAGCTGTCTTCTCAGAGCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS GCA 90 bp | AGCTCCGCCATCTCAATTTTCCCATCTGAGTTCTTATCATACTTCTaGATGAACTCCTTCATCTTCTCTCCAAAATTGTCGCTCTTGGAC | + |
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Preference number: 5 (lower is better) Translates to: SSAISIFPSEFLSYF*MNSFIFSPKLSLLD Trigger: GTCCAAGAGCGACAATTTTGGAGAGAAGATGAAGGAGTTCATGCAGAAGTATGATAAGAACTCAGATGGGAAAATTGAGATGGCGGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003754.8 ENSMUST00000212297.2 |
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| CDS-3UTR CAA 90 bp | CACTTTATTCTCTGTAAACTCTTCTTTGGTAAACAAGAAGACAGGGGAAGCCAATCAGACAGGAATCCCTaGAGCTCATTGGCTTCGATG | + |
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Preference number: 5 (lower is better) Translates to: HFILCKLFFGKQEDRGSQSDRNP*SSLASM Trigger: CATCGAAGCCAATGAGCTCAAGGGATTCCTGTCTGA...TTGGCTTCCCCTGTCTTCTTGTTTACCAAAGAAGAGTTTACAGAGAATAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS TCA 90 bp | CCGCCATCTCAATTTTCCCATCTGAGTTCTTATCATACTTCTGCATaGACTCCTTCATCTTCTCTCCAAAATTGTCGCTCTTGGACATCA | + |
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Preference number: 5 (lower is better) Translates to: PPSQFSHLSSYHTSA*TPSSSLQNCRSWTS Trigger: TGATGTCCAAGAGCGACAATTTTGGAGAGAAGATGAAGGAGTTCATGCAGAAGTATGATAAGAACTCAGATGGGAAAATTGAGATGGCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003754.8 ENSMUST00000212297.2 |
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| CDS GCA 72 bp | AGCATCAAAGTGCTTCCAGATTTCCAGGAACTGGGATaGAGTCAGCTCGGCCAGGTGCAGGTAAGGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SIKVLPDFQELG*SQLGQVQVRGL Trigger: CAGCCCCCTTACCTGCACCTGGCCGAGCTGACTGCATCCCAGTTCCTGGAAATCTGGAAGCACTTTGATGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003754.8 ENSMUST00000212297.2 |
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| CDS GCA 72 bp | CAAGCCTCCATAAACTCAGCGCTGGAGCCCACGTGCTaGCTGAAGCACAAAAGGAAATTCTCTTCGGTCGGC | + |
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Preference number: 6 (lower is better) Translates to: QASINSALEPTC*LKHKRKFSSVG Trigger: GCCGACCGAAGAGAATTTCCTTTTGTGCTTCAGGCAGCACGTGGGCTCCAGCGCTGAGTTTATGGAGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003754.8 ENSMUST00000212297.2 |
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| CDS GCA 72 bp | CGCCAAGCCTCCATAAACTCAGCGCTGGAGCCCACGTaGTGCCTGAAGCACAAAAGGAAATTCTCTTCGGTC | + |
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Preference number: 6 (lower is better) Translates to: RQASINSALEPT*CLKHKRKFSSV Trigger: GACCGAAGAGAATTTCCTTTTGTGCTTCAGGCAGCACGTGGGCTCCAGCGCTGAGTTTATGGAGGCTTGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003754.8 ENSMUST00000212297.2 |
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| CDS GCA 72 bp | GAGCACAATCTCCAGGTCCTTTCTGTAGAGCTTCCCTaGCTCGGCCAAGGACATGACACTCTTCCTGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: EHNLQVLSVELP*LGQGHDTLPVG Trigger: ACCTACAGGAAGAGTGTCATGTCCTTGGCCGAGGCAGGGAAGCTCTACAGAAAGGACCTGGAGATTGTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS CAA 90 bp | TCTCTCCAAAATTGTCGCTCTTGGACATCATGCCAGAACCCTTCCTaGCCTTCTCCAGCTCCTGGAAGAAGTTCTCTAGCTCTTTACCTT | + |
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Preference number: 6 (lower is better) Translates to: SLQNCRSWTSCQNPS*PSPAPGRSSLALYL Trigger: AAGGTAAAGAGCTAGAGAACTTCTTCCAGGAGCTGGAGAAGGCAAGGAAGGGTTCTGGCATGATGTCCAAGAGCGACAATTTTGGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003754.8 ENSMUST00000212297.2 |
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| CDS CAA 72 bp | CAAGGACATGACACTCTTCCTGTAGGTGGTGAGCTGTaGGATGTTCATCTCCTTCTTGTTCTTCTCATACAG | + |
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Preference number: 6 (lower is better) Translates to: QGHDTLPVGGEL*DVHLLLVLLIQ Trigger: CTGTATGAGAAGAACAAGAAGGAGATGAACATCCAACAGCTCACCACCTACAGGAAGAGTGTCATGTCCTTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003754.8 |
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| CDS CAA 90 bp | TTCTCTTGTACAGGCAAGAGTCTAGACATCTCTGAGAGACCCAATTaGCCATCTCCATTTAAGTCAAACATCCGTAGTATGGTCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: FSCTGKSLDISERPN*PSPFKSNIRSMVWV Trigger: CACCCAGACCATACTACGGATGTTTGACTTAAATGGAGATGGCAAATTGGGTCTCTCAGAGATGTCTAGACTCTTGCCTGTACAAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003754.8 ENSMUST00000212297.2 |
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| CDS CAA 72 bp | TACTTCTGCATGAACTCCTTCATCTTCTCTCCAAAATaGTCGCTCTTGGACATCATGCCAGAACCCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: YFCMNSFIFSPK*SLLDIMPEPFL Trigger: AAGGAAGGGTTCTGGCATGATGTCCAAGAGCGACAATTTTGGAGAGAAGATGAAGGAGTTCATGCAGAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003754.8 ENSMUST00000212297.2 |
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| CDS CAA 72 bp | ACAGGCAAGAGTCTAGACATCTCTGAGAGACCCAATTaGCCATCTCCATTTAAGTCAAACATCCGTAGTATG | + |
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Preference number: 6 (lower is better) Translates to: TGKSLDISERPN*PSPFKSNIRSM Trigger: CATACTACGGATGTTTGACTTAAATGGAGATGGCAAATTGGGTCTCTCAGAGATGTCTAGACTCTTGCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003754.8 ENSMUST00000212297.2 |
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| CDS GCA 72 bp | ATCTCAATTTTCCCATCTGAGTTCTTATCATACTTCTaGATGAACTCCTTCATCTTCTCTCCAAAATTGTCG | + |
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Preference number: 6 (lower is better) Translates to: ISIFPSEFLSYF*MNSFIFSPKLS Trigger: CGACAATTTTGGAGAGAAGATGAAGGAGTTCATGCAGAAGTATGATAAGAACTCAGATGGGAAAATTGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003754.8 ENSMUST00000212297.2 |
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