Pregenerated sensors for CALB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028222Ensembl transcript IDs: ENSMUST00000029876.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAAGCCCATCCCTTCCGCCAGATAGAAGCAGCACAGAGGTGCTTTaGGTGACAGTCCTATGGTTGCCTAAAATAAAAACAGTTGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: RSPSLPPDRSSTEVL*VTVLWLPKIKTVGL Trigger: CAAGCCAACTGTTTTTATTTTAGGCAACCATAGGACTGTCACCCAAAGCACCTCTGTGCTGCTTCTATCTGGCGGAAGGGATGGGCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR GCA 90 bp | AAATATGACTGCTGTTGCTGTCAGTACTCTAGGCCTTTTGAGAAATaGTACCACCAGTGTACGGTGGCACACATCTGTAATCCTGTCACT | + |
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Preference number: 1 (lower is better) Translates to: KYDCCCCQYSRPFEK*YHQCTVAHICNPVT Trigger: AGTGACAGGATTACAGATGTGTGCCACCGTACACTGGTGGTAGCATTTCTCAAAAGGCCTAGAGTACTGACAGCAACAGCAGTCATATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR CCA 90 bp | AGAAACCCCACCCTTATTCCTCATCAGGAACTGCTACTTCCTCCTTaGGACTATCCTCTTTGGGATCGACATTTAGTGCAGTCATTATAC | + |
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Preference number: 1 (lower is better) Translates to: RNPTLIPHQELLLPP*DYPLWDRHLVQSLY Trigger: GTATAATGACTGCACTAAATGTCGATCCCAAAGAGGATAGTCCCAAGGAGGAAGTAGCAGTTCCTGATGAGGAATAAGGGTGGGGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR TCA 90 bp | AAATCTCTAGGGAGATCGTTTCAGAATAAAGCCATAATTAACTGTTaGTATTTGGTGCTTCAGAGGCAGAAGCCCATCCCTTCCGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: KSLGRSFQNKAIINC*YLVLQRQKPIPSAR Trigger: TCTGGCGGAAGGGATGGGCTTCTGCCTCTGAAGCACCAAATATCAACAGTTAATTATGGCTTTATTCTGAAACGATCTCCCTAGAGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR GCA 90 bp | TTCTTGGTAGTTAAATTCAGTCTAAAGTCACTGCTTCCAAATACGTaGCGAAGTAAAGCCAGTGTATCACTTCTCCCCATCCTGGGATAT | + |
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Preference number: 1 (lower is better) Translates to: FLVVKFSLKSLLPNT*RSKASVSLLPILGY Trigger: ATATCCCAGGATGGGGAGAAGTGATACACTGGCTTTACTTCGGCACGTATTTGGAAGCAGTGACTTTAGACTGAATTTAACTACCAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR CCA 90 bp | ATTCCTCATCAGGAACTGCTACTTCCTCCTTGGGACTATCCTCTTTaGGATCGACATTTAGTGCAGTCATTATACCTGTTTTTGAAACAT | + |
|
Preference number: 1 (lower is better) Translates to: IPHQELLLPPWDYPL*DRHLVQSLYLFLKH Trigger: ATGTTTCAAAAACAGGTATAATGACTGCACTAAATGTCGATCCCAAAGAGGATAGTCCCAAGGAGGAAGTAGCAGTTCCTGATGAGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR CAA 90 bp | CAGAAACCCCACCCTTATTCCTCATCAGGAACTGCTACTTCCTCCTaGGGACTATCCTCTTTGGGATCGACATTTAGTGCAGTCATTATA | + |
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Preference number: 2 (lower is better) Translates to: QKPHPYSSSGTATSS*GLSSLGSTFSAVII Trigger: TATAATGACTGCACTAAATGTCGATCCCAAAGAGGATAGTCCCAAGGAGGAAGTAGCAGTTCCTGATGAGGAATAAGGGTGGGGTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR CAA 90 bp | GCTGTTTCTGCATCTGAATTGGTCTATAGCATTCATTTTAATGTATaGAGTGTGTATGTACCCCAGTTTGGCAGCTCTAGTTTGAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: AVSASELVYSIHFNV*SVYVPQFGSSSLSP Trigger: GGGACTCAAACTAGAGCTGCCAAACTGGGGTACATACACACTCAATACATTAAAATGAATGCTATAGACCAATTCAGATGCAGAAACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR CAA 90 bp | TATTCCTCATCAGGAACTGCTACTTCCTCCTTGGGACTATCCTCTTaGGGATCGACATTTAGTGCAGTCATTATACCTGTTTTTGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: YSSSGTATSSLGLSS*GSTFSAVIIPVFET Trigger: TGTTTCAAAAACAGGTATAATGACTGCACTAAATGTCGATCCCAAAGAGGATAGTCCCAAGGAGGAAGTAGCAGTTCCTGATGAGGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR-3UTR CCA 90 bp | TATAGGCATAGAATCAGACATAGTTATGTGTCATCTGGCTACCTTCCCTTACCATTAACTGTTGATATTTaGTGCTTCAGAGGCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: YRHRIRHSYVSSGYLPLPLTVDI*CFRGRS Trigger: GCTTCTGCCTCTGAAGCACCAAATATCAACAGTTAA...TGGTAAGGGAAGGTAGCCAGATGACACATAACTATGTCTGATTCTATGCCTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR CAA 90 bp | TATCCTCTTTGGGATCGACATTTAGTGCAGTCATTATACCTGTTTTaGAAACATGTAACTCAGTTGGTGCTATTCTGTTTCTGGCCGTTT | + |
|
Preference number: 2 (lower is better) Translates to: YPLWDRHLVQSLYLF*KHVTQLVLFCFWPF Trigger: AAACGGCCAGAAACAGAATAGCACCAACTGAGTTACATGTTTCAAAAACAGGTATAATGACTGCACTAAATGTCGATCCCAAAGAGGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAGTAGGCAAACTAGACACCAAAATACTCAGTACATTGAGTTTAATCAGAATGTGCCACACATCCTaGATAGTTCTCTATATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: QEVGKLDTKILSTLSLIRMCHTS*IVLYMQ Trigger: CTGCATATAGAGAACTATTCAGGATGTGTGGCACAT...TCTGATTAAACTCAATGTACTGAGTATTTTGGTGTCTAGTTTGCCTACTTCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR-3UTR TCA 90 bp | TATAGGCATAGAATCAGACATAGTTATGTGTCATCTGGCTACCTTCCCTTACCAACAGTTGGCTTGCCATaGGTTATTCTTTTACTCAAT | + |
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Preference number: 2 (lower is better) Translates to: YRHRIRHSYVSSGYLPLPTVGLP*VILLLN Trigger: ATTGAGTAAAAGAATAACTCATGGCAAGCCAACTGT...TGGTAAGGGAAGGTAGCCAGATGACACATAACTATGTCTGATTCTATGCCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGGCAAACTAGACACCAAAATACTCAGTACATTGAGTTTAATCAGAGAGCACGCCATAATTAACTGTTaGTATTTGGTGCTTCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VGKLDTKILSTLSLIREHAIINC*YLVLQR Trigger: CCTCTGAAGCACCAAATATCAACAGTTAATTATGGC...GTGCTCTCTGATTAAACTCAATGTACTGAGTATTTTGGTGTCTAGTTTGCCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGGCAAACTAGACACCAAAATACTCAGTACATTGAGTTTAATCAGAGAGCACATTGATTGTACTGACTaGCCTAAGCATGGTCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VGKLDTKILSTLSLIREHIDCTD*PKHGLS Trigger: AGAAAGACCATGCTTAGGCCAGTCAGTACAATCAAT...GTGCTCTCTGATTAAACTCAATGTACTGAGTATTTTGGTGTCTAGTTTGCCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR GCA 72 bp | AATCCAGAAACCCCACCCTTATTCCTCATCAGGAACTaGTACTTCCTCCTTGGGACTATCCTCTTTGGGATC | + |
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Preference number: 3 (lower is better) Translates to: NPETPPLFLIRN*YFLLGTILFGI Trigger: GATCCCAAAGAGGATAGTCCCAAGGAGGAAGTAGCAGTTCCTGATGAGGAATAAGGGTGGGGTTTCTGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR GCA 72 bp | TGCTGTTGCTGTCAGTACTCTAGGCCTTTTGAGAAATaGTACCACCAGTGTACGGTGGCACACATCTGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: CCCCQYSRPFEK*YHQCTVAHICN Trigger: ATTACAGATGTGTGCCACCGTACACTGGTGGTAGCATTTCTCAAAAGGCCTAGAGTACTGACAGCAACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR CCA 72 bp | TCCCTTCCGCCAGATAGAAGCAGCACAGAGGTGCTTTaGGTGACAGTCCTATGGTTGCCTAAAATAAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: SLPPDRSSTEVL*VTVLWLPKIKT Trigger: TGTTTTTATTTTAGGCAACCATAGGACTGTCACCCAAAGCACCTCTGTGCTGCTTCTATCTGGCGGAAGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR CCA 72 bp | ACCCTTATTCCTCATCAGGAACTGCTACTTCCTCCTTaGGACTATCCTCTTTGGGATCGACATTTAGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: TLIPHQELLLPP*DYPLWDRHLVQ Trigger: CTGCACTAAATGTCGATCCCAAAGAGGATAGTCCCAAGGAGGAAGTAGCAGTTCCTGATGAGGAATAAGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR CCA 72 bp | CAGGAACTGCTACTTCCTCCTTGGGACTATCCTCTTTaGGATCGACATTTAGTGCAGTCATTATACCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: QELLLPPWDYPL*DRHLVQSLYLF Trigger: AAACAGGTATAATGACTGCACTAAATGTCGATCCCAAAGAGGATAGTCCCAAGGAGGAAGTAGCAGTTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR GCA 72 bp | GTTAAATTCAGTCTAAAGTCACTGCTTCCAAATACGTaGCGAAGTAAAGCCAGTGTATCACTTCTCCCCATC | + |
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Preference number: 3 (lower is better) Translates to: VKFSLKSLLPNT*RSKASVSLLPI Trigger: GATGGGGAGAAGTGATACACTGGCTTTACTTCGGCACGTATTTGGAAGCAGTGACTTTAGACTGAATTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAGTAGGCAAACTAGACACCAAAATACTCAGTACATTGAGTTTAATCAGAGTGACAGTCCTATGGTaGCCTAAAATAAAAACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: QEVGKLDTKILSTLSLIRVTVLW*PKIKTV Trigger: AACTGTTTTTATTTTAGGCAACCATAGGACTGTCAC...TCTGATTAAACTCAATGTACTGAGTATTTTGGTGTCTAGTTTGCCTACTTCCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR CAA 72 bp | CACCCTTATTCCTCATCAGGAACTGCTACTTCCTCCTaGGGACTATCCTCTTTGGGATCGACATTTAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: HPYSSSGTATSS*GLSSLGSTFSA Trigger: TGCACTAAATGTCGATCCCAAAGAGGATAGTCCCAAGGAGGAAGTAGCAGTTCCTGATGAGGAATAAGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR TCA 90 bp | TATAGGCATAGAATCAGACATAGTTATGTGTCATCTGGCTACCTTCCCTTACCAGTTCCTCGGTTTCGATaGAGCCGCTGTGGTCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: YRHRIRHSYVSSGYLPLPVPRFR*SRCGQY Trigger: ATACTGACCACAGCGGCTTCATCGAAACCGAGGAAC...TGGTAAGGGAAGGTAGCCAGATGACACATAACTATGTCTGATTCTATGCCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR GCA 90 bp | GTAGGCAAACTAGACACCAAAATACTCAGTACATTGAGTTTAATCAGAGAGCACGCCTTCTTTCGCGCCTaGAGAAGCTCCTGGATCAAG | + |
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Preference number: 4 (lower is better) Translates to: VGKLDTKILSTLSLIREHAFFRA*RSSWIK Trigger: CTTGATCCAGGAGCTTCTGCAGGCGCGAAAGAAGGC...GTGCTCTCTGATTAAACTCAATGTACTGAGTATTTTGGTGTCTAGTTTGCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR GCA 90 bp | TATAGGCATAGAATCAGACATAGTTATGTGTCATCTGGCTACCTTCCCTTACCATCGCAGGACTTCAGTTaGTGGCATCGAAAGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: YRHRIRHSYVSSGYLPLPSQDFS*WHRKSS Trigger: GCTGCTCTTTCGATGCCAGCAACTGAAGTCCTGCGA...TGGTAAGGGAAGGTAGCCAGATGACACATAACTATGTCTGATTCTATGCCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR CAA 72 bp | TCAGGAACTGCTACTTCCTCCTTGGGACTATCCTCTTaGGGATCGACATTTAGTGCAGTCATTATACCTGTT | + |
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Preference number: 4 (lower is better) Translates to: SGTATSSLGLSS*GSTFSAVIIPV Trigger: AACAGGTATAATGACTGCACTAAATGTCGATCCCAAAGAGGATAGTCCCAAGGAGGAAGTAGCAGTTCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR GCA 90 bp | GTAGGCAAACTAGACACCAAAATACTCAGTACATTGAGTTTAATCAGAGAGCACTCCTGGATCAAGTTCTaGAGCTCCTTTCCTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VGKLDTKILSTLSLIREHSWIKF*SSFPSR Trigger: CCTGGAAGGAAAGGAGCTGCAGAACTTGATCCAGGA...GTGCTCTCTGATTAAACTCAATGTACTGAGTATTTTGGTGTCTAGTTTGCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR CCA 90 bp | GTAGGCAAACTAGACACCAAAATACTCAGTACATTGAGTTTAATCAGAGAGCACCAGGACTTCAGTTGCTaGCATCGAAAGAGCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: VGKLDTKILSTLSLIREHQDFSC*HRKSSK Trigger: CTTGCTGCTCTTTCGATGCCAGCAACTGAAGTCCTG...GTGCTCTCTGATTAAACTCAATGTACTGAGTATTTTGGTGTCTAGTTTGCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR TCA 90 bp | CAGGAAGTAGGCAAACTAGACACCAAAATACTCAGTACATTGAGTTTAATCAGAAAAACTGTGAGGCTGTaGTCAGAGATGACTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: QEVGKLDTKILSTLSLIRKTVRL*SEMTAG Trigger: ACCTGCAGTCATCTCTGATCACAGCCTCACAGTTTT...TCTGATTAAACTCAATGTACTGAGTATTTTGGTGTCTAGTTTGCCTACTTCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR GCA 90 bp | GTAGGCAAACTAGACACCAAAATACTCAGTACATTGAGTTTAATCAGAGAGCACAGAAGGAAATTTTCCTaGACTGGTAGTAACCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VGKLDTKILSTLSLIREHRRKFS*TGSNLA Trigger: GGCCAGGTTACTACCAGTGCAGGAAAATTTCCTTCT...GTGCTCTCTGATTAAACTCAATGTACTGAGTATTTTGGTGTCTAGTTTGCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR CCA 90 bp | CAGGAAGTAGGCAAACTAGACACCAAAATACTCAGTACATTGAGTTTAATCAGATCGATGAAGCCGCTGTaGTCAGTATCATACTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QEVGKLDTKILSTLSLIRSMKPL*SVSYFL Trigger: GAGAAAGTATGATACTGACCACAGCGGCTTCATCGA...TCTGATTAAACTCAATGTACTGAGTATTTTGGTGTCTAGTTTGCCTACTTCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| 3UTR CAA 72 bp | CAGTCATTATACCTGTTTTTGAAACATGTAACTCAGTaGGTGCTATTCTGTTTCTGGCCGTTTCTACCTGTG | + |
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Preference number: 4 (lower is better) Translates to: QSLYLFLKHVTQ*VLFCFWPFLPV Trigger: CACAGGTAGAAACGGCCAGAAACAGAATAGCACCAACTGAGTTACATGTTTCAAAAACAGGTATAATGACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR TCA 90 bp | CAGGAAGTAGGCAAACTAGACACCAAAATACTCAGTACATTGAGTTTAATCAGATCTCTCTGTCCATATTaGTCCACAAAGGATTTCATT | + |
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Preference number: 4 (lower is better) Translates to: QEVGKLDTKILSTLSLIRSLCPY*STKDFI Trigger: AATGAAATCCTTTGTGGATCAATATGGACAGAGAGA...TCTGATTAAACTCAATGTACTGAGTATTTTGGTGTCTAGTTTGCCTACTTCCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS GCA 90 bp | GATTTCATTTCCGGTGATAGCTCCAATCCAGCCTTCTTTCGCGCCTaGAGAAGCTCCTGGATCAAGTTCTGCAGCTCCTTTCCTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: DFISGDSSNPAFFRA*RSSWIKFCSSFPSR Trigger: CCTGGAAGGAAAGGAGCTGCAGAACTTGATCCAGGAGCTTCTGCAGGCGCGAAAGAAGGCTGGATTGGAGCTATCACCGGAAATGAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS CCA 90 bp | TACTTTCTCCAAGTCTTCATGAATTCCTCGCAGGACTTCAGTTGCTaGCATCGAAAGAGCAGCAAGAAATTCTCTTCTGTGGGTAAGACG | + |
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Preference number: 5 (lower is better) Translates to: YFLQVFMNSSQDFSC*HRKSSKKFSSVGKT Trigger: CGTCTTACCCACAGAAGAGAATTTCTTGCTGCTCTTTCGATGCCAGCAACTGAAGTCCTGCGAGGAATTCATGAAGACTTGGAGAAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR CAA 90 bp | GTAGGCAAACTAGACACCAAAATACTCAGTACATTGAGTTTAATCAGAGAGCACCTCGCAGGACTTCAGTaGCTGGCATCGAAAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: VGKLDTKILSTLSLIREHLAGLQ*LASKEQ Trigger: CTGCTCTTTCGATGCCAGCAACTGAAGTCCTGCGAG...GTGCTCTCTGATTAAACTCAATGTACTGAGTATTTTGGTGTCTAGTTTGCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS GCA 90 bp | TCATACTTTCTCCAAGTCTTCATGAATTCCTCGCAGGACTTCAGTTaGTGGCATCGAAAGAGCAGCAAGAAATTCTCTTCTGTGGGTAAG | + |
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Preference number: 5 (lower is better) Translates to: SYFLQVFMNSSQDFS*WHRKSSKKFSSVGK Trigger: CTTACCCACAGAAGAGAATTTCTTGCTGCTCTTTCGATGCCAGCAACTGAAGTCCTGCGAGGAATTCATGAAGACTTGGAGAAAGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS CCA 90 bp | TCCTTTAGAAAGTTCTTAAGTTCCTCGGTTTCGATGAAGCCGCTGTaGTCAGTATCATACTTTCTCCAAGTCTTCATGAATTCCTCGCAG | + |
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Preference number: 5 (lower is better) Translates to: SFRKFLSSSVSMKPL*SVSYFLQVFMNSSQ Trigger: CTGCGAGGAATTCATGAAGACTTGGAGAAAGTATGATACTGACCACAGCGGCTTCATCGAAACCGAGGAACTTAAGAACTTTCTAAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR CAA 90 bp | GTAGGCAAACTAGACACCAAAATACTCAGTACATTGAGTTTAATCAGAGAGCACCATCCACAGTCTTGTTaGCTTTCTCTAGTAGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: VGKLDTKILSTLSLIREHHPQSC*LSLVGP Trigger: AGGACCTACTAGAGAAAGCAAACAAGACTGTGGATG...GTGCTCTCTGATTAAACTCAATGTACTGAGTATTTTGGTGTCTAGTTTGCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR CAA 90 bp | TATAGGCATAGAATCAGACATAGTTATGTGTCATCTGGCTACCTTCCCTTACCAGTATCATCCACAGTCTaGTTTGCTTTCTCTAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: YRHRIRHSYVSSGYLPLPVSSTV*FAFSSR Trigger: CCTACTAGAGAAAGCAAACAAGACTGTGGATGATAC...TGGTAAGGGAAGGTAGCCAGATGACACATAACTATGTCTGATTCTATGCCTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR CAA 90 bp | TATAGGCATAGAATCAGACATAGTTATGTGTCATCTGGCTACCTTCCCTTACCATGTACTCTGCTAGTTTaGTATCATCCACAGTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: YRHRIRHSYVSSGYLPLPCTLLV*YHPQSC Trigger: ACAAGACTGTGGATGATACAAAACTAGCAGAGTACA...TGGTAAGGGAAGGTAGCCAGATGACACATAACTATGTCTGATTCTATGCCTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR CAA 90 bp | TATAGGCATAGAATCAGACATAGTTATGTGTCATCTGGCTACCTTCCCTTACCATCTTTCCCACACATTTaGATTCCCTGGAATTTAAGA | + |
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Preference number: 5 (lower is better) Translates to: YRHRIRHSYVSSGYLPLPSFPHI*IPWNLR Trigger: TCTTAAATTCCAGGGAATCAAAATGTGTGGGAAAGA...TGGTAAGGGAAGGTAGCCAGATGACACATAACTATGTCTGATTCTATGCCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR CAA 90 bp | TATAGGCATAGAATCAGACATAGTTATGTGTCATCTGGCTACCTTCCCTTACCAATATCCAATTCCTGTTaGTTCTTCTCACACAGATCT | + |
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Preference number: 5 (lower is better) Translates to: YRHRIRHSYVSSGYLPLPISNSC*FFSHRS Trigger: AGATCTGTGTGAGAAGAACAAACAGGAATTGGATAT...TGGTAAGGGAAGGTAGCCAGATGACACATAACTATGTCTGATTCTATGCCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR CAA 90 bp | GTAGGCAAACTAGACACCAAAATACTCAGTACATTGAGTTTAATCAGAGAGCACATCTCTCTGTCCATATaGATCCACAAAGGATTTCAT | + |
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Preference number: 5 (lower is better) Translates to: VGKLDTKILSTLSLIREHISLSI*IHKGFH Trigger: ATGAAATCCTTTGTGGATCAATATGGACAGAGAGAT...GTGCTCTCTGATTAAACTCAATGTACTGAGTATTTTGGTGTCTAGTTTGCCTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS-3UTR CAA 90 bp | CAGGAAGTAGGCAAACTAGACACCAAAATACTCAGTACATTGAGTTTAATCAGAAACTCAAAAGCCTTATaGAACTCTTTCCCACACATT | + |
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Preference number: 5 (lower is better) Translates to: QEVGKLDTKILSTLSLIRNSKAL*NSFPHI Trigger: AATGTGTGGGAAAGAGTTCAATAAGGCTTTTGAGTT...TCTGATTAAACTCAATGTACTGAGTATTTTGGTGTCTAGTTTGCCTACTTCCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS GCA 72 bp | CTCCAAGTCTTCATGAATTCCTCGCAGGACTTCAGTTaGTGGCATCGAAAGAGCAGCAAGAAATTCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LQVFMNSSQDFS*WHRKSSKKFSS Trigger: AGAAGAGAATTTCTTGCTGCTCTTTCGATGCCAGCAACTGAAGTCCTGCGAGGAATTCATGAAGACTTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS CAA 72 bp | TCTCCAAGTCTTCATGAATTCCTCGCAGGACTTCAGTaGCTGGCATCGAAAGAGCAGCAAGAAATTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SPSLHEFLAGLQ*LASKEQQEILF Trigger: GAAGAGAATTTCTTGCTGCTCTTTCGATGCCAGCAACTGAAGTCCTGCGAGGAATTCATGAAGACTTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS GCA 72 bp | ATTTTGATTCCCTGGAATTTAAGAAGGAAATTTTCCTaGACTGGTAGTAACCTGGCCATCTCTGTCAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: ILIPWNLRRKFS*TGSNLAISVSS Trigger: GGAACTGACAGAGATGGCCAGGTTACTACCAGTGCAGGAAAATTTCCTTCTTAAATTCCAGGGAATCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS CCA 72 bp | AAGTTCTTAAGTTCCTCGGTTTCGATGAAGCCGCTGTaGTCAGTATCATACTTTCTCCAAGTCTTCATGAAT | + |
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Preference number: 6 (lower is better) Translates to: KFLSSSVSMKPL*SVSYFLQVFMN Trigger: ATTCATGAAGACTTGGAGAAAGTATGATACTGACCACAGCGGCTTCATCGAAACCGAGGAACTTAAGAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS CAA 90 bp | AGCATGAGGTCTGTGTACTCTGCTAGTTTTGTATCATCCACAGTCTaGTTTGCTTTCTCTAGTAGGTCCTTTAGAAAGTTCTTAAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SMRSVYSASFVSSTV*FAFSSRSFRKFLSS Trigger: GGAACTTAAGAACTTTCTAAAGGACCTACTAGAGAAAGCAAACAAGACTGTGGATGATACAAAACTAGCAGAGTACACAGACCTCATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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| CDS CAA 90 bp | CCTCCATCCGACAAGGCCATTATGTTCTTCTTGTATGTAGTAATATaGTTAATATCCAATTCCTGTTTGTTCTTCTCACACAGATCTTTC | + |
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Preference number: 6 (lower is better) Translates to: PPSDKAIMFFLYVVI*LISNSCLFFSHRSF Trigger: GAAAGATCTGTGTGAGAAGAACAAACAGGAATTGGATATTAACAATATTACTACATACAAGAAGAACATAATGGCCTTGTCGGATGGAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029876.2 |
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