RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CADPS (Mus musculus)

Ensembl gene IDs: ENSMUSG00000054423

Ensembl transcript IDs: ENSMUST00000067491.14, ENSMUST00000112657.9, ENSMUST00000112658.8, ENSMUST00000177814.2, ENSMUST00000224581.2, ENSMUST00000224882.2

Found 744 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGCATCCATGTCCACTGCAAAGAGTGACAGGAACGTCTCCGCATaGTCCACCATTAAGTCTGACCACCACGCAAAGGCCTCGGCGTGG +
Preference number: 1 (lower is better)
Translates to: AASMSTAKSDRNVSA*STIKSDHHAKASAW
Trigger: CCACGCCGAGGCCTTTGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACATGGATGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR TCA 90 bp CAAAGGCCTCGGCGTGGTGCTCCTCGTTTTGTTGCAGTACTTCGATaGCTAGTTCAGCAAGACGGATTGTGTCTTCGAGCTTTTTGGCGG +
Preference number: 1 (lower is better)
Translates to: QRPRRGAPRFVAVLR*LVQQDGLCLRAFWR
Trigger: CCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAACTAGTCATCGAAGTACTGCAACAAAACGAGGAGCACCACGCCGAGGCCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 90 bp TCAGGTGTTCCCCTCACTGATGGCCCAAGGTGGACAGTGTGCCTTTaGTTGCTTTATTTGGATGTCATGTGTTTTGTGTGTGAGAGAACA +
Preference number: 1 (lower is better)
Translates to: SGVPLTDGPRWTVCL*LLYLDVMCFVCERT
Trigger: TGTTCTCTCACACACAAAACACATGACATCCAAATAAAGCAAGCAAAGGCACACTGTCCACCTTGGGCCATCAGTGAGGGGAACACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 90 bp TTGACGCAGGACTCAATCATGTCACTTGCCATCAGTTTTAGCCGCTaGTCTAAGTGTTTTCCAAACTCTTCCTCAGGCCAGTGTAGGTCA +
Preference number: 1 (lower is better)
Translates to: LTQDSIMSLAISFSR*SKCFPNSSSGQCRS
Trigger: TGACCTACACTGGCCTGAGGAAGAGTTTGGAAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAGTGACATGATTGAGTCCTGCGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 90 bp ATGCAGCCAGAGAATGTGGGGTTGTCTGAATTAACAATCCCAGCATaGTTTGAAATTGGCGTCTCAGCCACTTTTGCAGAGGTTGTGTCA +
Preference number: 1 (lower is better)
Translates to: MQPENVGLSELTIPA*FEIGVSATFAEVVS
Trigger: TGACACAACCTCTGCAAAAGTGGCTGAGACGCCAATTTCAAAGCATGCTGGGATTGTTAATTCAGACAACCCCACATTCTCTGGCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR TCA 90 bp TGCAATATCCCAGCCTACAGTGGACTATGTTCATGGAAGAAAACCTaGCACATGCAGCCAGAGAATGTGGGGTTGTCTGAATTAACAATC +
Preference number: 1 (lower is better)
Translates to: CNIPAYSGLCSWKKT*HMQPENVGLSELTI
Trigger: GATTGTTAATTCAGACAACCCCACATTCTCTGGCTGCATGTGTCAGGTTTTCTTCCATGAACATAGTCCACTGTAGGCTGGGATATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR TCA 90 bp CTAAGTGTTTTCCAAACTCTTCCTCAGGCCAGTGTAGGTCACGGATaGAAGTCTGAAGGGCATCAAGTTTCCAGAACAAATCTTCTGATG +
Preference number: 1 (lower is better)
Translates to: LSVFQTLPQASVGHG*KSEGHQVSRTNLLM
Trigger: CATCAGAAGATTTGTTCTGGAAACTTGATGCCCTTCAGACTTTCATCCGTGACCTACACTGGCCTGAGGAAGAGTTTGGAAAACACTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 90 bp TGTGTGAGAGAACATGAGATTCCAGAGTGTGGACACATCAAGTCTTaGACACAGAACTTCCACATGAATACACTTACACCTCTGGTCAAG +
Preference number: 1 (lower is better)
Translates to: CVREHEIPECGHIKS*TQNFHMNTLTPLVK
Trigger: CTTGACCAGAGGTGTAAGTGTATTCATGTGGAAGTTCTGTGTGCAAGACTTGATGTGTCCACACTCTGGAATCTCATGTTCTCTCACACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CCA 90 bp TTTCGTGATCCTATCCCATCTCTGGCTTTCGGATTAGTAATTACATaGTTGACTTTACCCAATCCAACCAACCATTATGTCCTGGGCTGG +
Preference number: 1 (lower is better)
Translates to: FRDPIPSLAFGLVIT*LTLPNPTNHYVLGW
Trigger: CCAGCCCAGGACATAATGGTTGGTTGGATTGGGTAAAGTCAACCATGTAATTACTAATCCGAAAGCCAGAGATGGGATAGGATCACGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CCA 90 bp AAAAGACTAGTAATAGCTGGACCAAGACCCATGAGGCAGCAGTTGTaGAAACTGAACATTTCATTTCGTGATCCTATCCCATCTCTGGCT +
Preference number: 1 (lower is better)
Translates to: KRLVIAGPRPMRQQL*KLNISFRDPIPSLA
Trigger: AGCCAGAGATGGGATAGGATCACGAAATGAAATGTTCAGTTTCCACAACTGCTGCCTCATGGGTCTTGGTCCAGCTATTACTAGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CCA 90 bp CAGGATGCTCATACATTTCTCTCTTTTTCCCTACAAAAGAGGATTTaGGCATGCAAGAGGCTTAGGTCAGAGGTAAAGAGGTTCAAGGTC +
Preference number: 1 (lower is better)
Translates to: QDAHTFLSFSLQKRI*ACKRLRSEVKRFKV
Trigger: GACCTTGAACCTCTTTACCTCTGACCTAAGCCTCTTGCATGCCCAAATCCTCTTTTGTAGGGAAAAAGAGAGAAATGTATGAGCATCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 90 bp GCTCATACATTTCTCTCTTTTTCCCTACAAAAGAGGATTTGGGCATaGAAGAGGCTTAGGTCAGAGGTAAAGAGGTTCAAGGTCATAGGT +
Preference number: 1 (lower is better)
Translates to: AHTFLSFSLQKRIWA*KRLRSEVKRFKVIG
Trigger: ACCTATGACCTTGAACCTCTTTACCTCTGACCTAAGCCTCTTGCATGCCCAAATCCTCTTTTGTAGGGAAAAAGAGAGAAATGTATGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CCA 90 bp TGTCTGGTAGTAATATCTTTGAAGCTGCAATATCCCAGCCTACAGTaGACTATGTTCATGGAAGAAAACCTGACACATGCAGCCAGAGAA +
Preference number: 1 (lower is better)
Translates to: CLVVISLKLQYPSLQ*TMFMEENLTHAARE
Trigger: TTCTCTGGCTGCATGTGTCAGGTTTTCTTCCATGAACATAGTCCACTGTAGGCTGGGATATTGCAGCTTCAAAGATATTACTACCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR TCA 90 bp AGTGTGCCTTTGCTTGCTTTATTTGGATGTCATGTGTTTTGTGTGTaGGAGAACATGAGATTCCAGAGTGTGGACACATCAAGTCTTGCA +
Preference number: 1 (lower is better)
Translates to: SVPLLALFGCHVFCV*ENMRFQSVDTSSLA
Trigger: TGCAAGACTTGATGTGTCCACACTCTGGAATCTCATGTTCTCTCACACACAAAACACATGACATCCAAATAAAGCAAGCAAAGGCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR TCA 90 bp AAGACCCATGAGGCAGCAGTTGTGGAAACTGAACATTTCATTTCGTaGTCCTATCCCATCTCTGGCTTTCGGATTAGTAATTACATGGTT +
Preference number: 1 (lower is better)
Translates to: KTHEAAVVETEHFIS*SYPISGFRISNYMV
Trigger: AACCATGTAATTACTAATCCGAAAGCCAGAGATGGGATAGGATCACGAAATGAAATGTTCAGTTTCCACAACTGCTGCCTCATGGGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CCA 90 bp TATCTGAAAGAAGAGAGCAGATCTTACCAAAAGACTAGTAATAGCTaGACCAAGACCCATGAGGCAGCAGTTGTGGAAACTGAACATTTC +
Preference number: 1 (lower is better)
Translates to: YLKEESRSYQKTSNS*TKTHEAAVVETEHF
Trigger: GAAATGTTCAGTTTCCACAACTGCTGCCTCATGGGTCTTGGTCCAGCTATTACTAGTCTTTTGGTAAGATCTGCTCTCTTCTTTCAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 90 bp TTGACAGAAAATTACCTAATGGGGTTAACTAACAGACTAAAGACATaGATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGA +
Preference number: 1 (lower is better)
Translates to: LTENYLMGLTNRLKT*IDYRTPSQWTLGPR
Trigger: TCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATTTTCTGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR CCA 90 bp ACTAACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATaGACTCTTGGACCCAGAGAATGGTCTAATCATCTTCTTCATCTT +
Preference number: 1 (lower is better)
Translates to: TNRLKTCIDYRTPSQ*TLGPREWSNHLLHL
Trigger: AAGATGAAGAAGATGATTAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR TCA 90 bp CTAAAAGTCACAGTGCAAAAGATAATTAACACAACCAAGAAGAATTaGGGCACAGAAGGAGACTACAGACCAGCTGATCTACTTCAGAAA +
Preference number: 1 (lower is better)
Translates to: LKVTVQKIINTTKKN*GTEGDYRPADLLQK
Trigger: TTTCTGAAGTAGATCAGCTGGTCTGTAGTCTCCTTCTGTGCCTCAATTCTTCTTGGTTGTGTTAATTATCTTTTGCACTGTGACTTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR TCA 90 bp ATGGTATTGATGCTCTTGGCCCATTTCCATGCTGCAAAGTTTTGTTaGTTGAGCTTTGGCATCAACCATAACATTAAACATGGTGCATAT +
Preference number: 1 (lower is better)
Translates to: MVLMLLAHFHAAKFC*LSFGINHNIKHGAY
Trigger: ATATGCACCATGTTTAATGTTATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGCATCAATACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR TCA 90 bp GAGGGGAGGAAGACATGTAATGTACAGAACATTGGGAATTTAACATaGTTGTCAGCTAATTTTCTAAGGAAACAGGACATTGGCAGTATA +
Preference number: 1 (lower is better)
Translates to: EGRKTCNVQNIGNLT*LSANFLRKQDIGSI
Trigger: TATACTGCCAATGTCCTGTTTCCTTAGAAAATTAGCTGACAATCATGTTAAATTCCCAATGTTCTGTACATTACATGTCTTCCTCCCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp GGCCACGTCCATCCCGGGTTTAGGCACGTCCACATACTTGGAAGCTGCCTTCACAATCCCAGCATGCTTTaGAATTGGCGTCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: GHVHPGFRHVHILGSCLHNPSML*NWRLSH
Trigger: GTGGCTGAGACGCCAATTTCAAAGCATGCTGGGATT...GTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp GGCCACGTCCATCCCGGGTTTAGGCACGTCCACATACTTGGAAGCTGCCTTCACCGTCTCAGCCACTTTTaGAGAGGTTGTGTCAAAAAG +
Preference number: 2 (lower is better)
Translates to: GHVHPGFRHVHILGSCLHRLSHF*RGCVKK
Trigger: CTTTTTGACACAACCTCTGCAAAAGTGGCTGAGACG...GTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp GGCCACGTCCATCCCGGGTTTAGGCACGTCCACATACTTGGAAGCTGCCTTCACGGCCCATTTCCATGCTaGAAAGTTTTGTTGATTGAG +
Preference number: 2 (lower is better)
Translates to: GHVHPGFRHVHILGSCLHGPFPC*KVLLIE
Trigger: CTCAATCAACAAAACTTTGCAGCATGGAAATGGGCC...GTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp AGAGTGACAGGAACGTCTCCGCATGCTCCACCATTAAGTCTGACCACCACGCAAAGGACTCCATCCCAATaGACTCTTGGACCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: RVTGTSPHAPPLSLTTTQRTPSQ*TLGPRE
Trigger: TTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCT...TTGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp CCCTCACTCACTGACGCTGTAGCTTCCTCCACAGTGAGACGGTTTCGGATGGTCTACTTCCAATACTACTaGCAACAGACAGCAGACAGC +
Preference number: 2 (lower is better)
Translates to: PSLTDAVASSTVRRFRMVYFQYY*QQTADS
Trigger: GCTGTCTGCTGTCTGTTGCCAGTAGTATTGGAAGTA...GACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp GGCCACGTCCATCCCGGGTTTAGGCACGTCCACATACTTGGAAGCTGCCTTCACATACACTTACACCTCTaGTCAAGTTGGGTGTGGTTT +
Preference number: 2 (lower is better)
Translates to: GHVHPGFRHVHILGSCLHIHLHL*SSWVWF
Trigger: AAACCACACCCAACTTGACCAGAGGTGTAAGTGTAT...GTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp GGCCACGTCCATCCCGGGTTTAGGCACGTCCACATACTTGGAAGCTGCCTTCACAAGCCCTTTAATCATTaGTCTTCTCGTTCCTCTCTT +
Preference number: 2 (lower is better)
Translates to: GHVHPGFRHVHILGSCLHKPFNH*SSRSSL
Trigger: AAGAGAGGAACGAGAAGATCAATGATTAAAGGGCTT...GTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp CTTGCCATCAGTTTTAGCCGCTGCTCTAAGTGTTTTCCAAACTCTTCCTCAGGCCAGCAGCTGGAAGAGTaGGAAACTGTCCCACGTGTC +
Preference number: 2 (lower is better)
Translates to: LAISFSRCSKCFPNSSSGQQLEE*ETVPRV
Trigger: GACACGTGGGACAGTTTCCCACTCTTCCAGCTGCTG...GCCTGAGGAAGAGTTTGGAAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp CCCTCACTCACTGACGCTGTAGCTTCCTCCACAGTGAGACGGTTTCGGATGGTCAGCAGTTGTGGAAACTaGACATTTCATTTCGTGATC +
Preference number: 2 (lower is better)
Translates to: PSLTDAVASSTVRRFRMVSSCGN*TFHFVI
Trigger: GATCACGAAATGAAATGTTCAGTTTCCACAACTGCT...GACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp CCCTCACTCACTGACGCTGTAGCTTCCTCCACAGTGAGACGGTTTCGGATGGTCAGACTACAGACCAGCTaGTCTACTTCAGAAATGAAT +
Preference number: 2 (lower is better)
Translates to: PSLTDAVASSTVRRFRMVRLQTS*STSEMN
Trigger: ATTCATTTCTGAAGTAGATCAGCTGGTCTGTAGTCT...GACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp AGAGTGACAGGAACGTCTCCGCATGCTCCACCATTAAGTCTGACCACCACGCAAGGACACATCAAGTCTTaGACACAGAACTTCCACATG +
Preference number: 2 (lower is better)
Translates to: RVTGTSPHAPPLSLTTTQGHIKS*TQNFHM
Trigger: CATGTGGAAGTTCTGTGTGCAAGACTTGATGTGTCC...TTGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp AGAGTGACAGGAACGTCTCCGCATGCTCCACCATTAAGTCTGACCACCACGCAACCAAGGTGGACAGTGTaGCTTTGCTTGCTTTATTTG +
Preference number: 2 (lower is better)
Translates to: RVTGTSPHAPPLSLTTTQPRWTV*LCLLYL
Trigger: CAAATAAAGCAAGCAAAGGCACACTGTCCACCTTGG...TTGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp TGTCCACTGCAAAGAGTGACAGGAACGTCTCCGCATGCTCCACCATTAAGTCTGAAGAGGATTTGGGCATaGAAGAGGCTTAGGTCAGAG +
Preference number: 2 (lower is better)
Translates to: CPLQRVTGTSPHAPPLSLKRIWA*KRLRSE
Trigger: CTCTGACCTAAGCCTCTTGCATGCCCAAATCCTCTT...CAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp CCCTCACTCACTGACGCTGTAGCTTCCTCCACAGTGAGACGGTTTCGGATGGTCCCCCACATTTATTGTTaGTTTTCCTCTAAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: PSLTDAVASSTVRRFRMVPHIYC*FSSKGC
Trigger: ACAGCCTTTAGAGGAAAACCAACAATAAATGTGGGG...GACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp AGAGTGACAGGAACGTCTCCGCATGCTCCACCATTAAGTCTGACCACCACGCAAAAGACTAGTAATAGCTaGACCAAGACCCATGAGGCA +
Preference number: 2 (lower is better)
Translates to: RVTGTSPHAPPLSLTTTQKTSNS*TKTHEA
Trigger: TGCCTCATGGGTCTTGGTCCAGCTATTACTAGTCTT...TTGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CAA 90 bp TCCCAGCATGCTTTGAAATTGGCGTCTCAGCCACTTTTGCAGAGGTaGTGTCAAAAAGTGGCTGAGCCAATCACGGACAAGGAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: SQHALKLASQPLLQR*CQKVAEPITDKEGE
Trigger: TTCTCCTTCCTTGTCCGTGATTGGCTCAGCCACTTTTTGACACAACCTCTGCAAAAGTGGCTGAGACGCCAATTTCAAAGCATGCTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp GCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGTCTATACTGGTTAAACTCTTaGCTGGCTCCCATGACTCCC +
Preference number: 2 (lower is better)
Translates to: ALITGLHPNGLLDPENGLYWLNS*LAPMTP
Trigger: GGGAGTCATGGGAGCCAGTCAAGAGTTTAACCAGTA...TAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGATGCAAAGCTGGGTTTaGTGGGACACAAGTGGTCCA +
Preference number: 2 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMMQSWV*WDTSGP
Trigger: TGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCAT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp AGAGTGACAGGAACGTCTCCGCATGCTCCACCATTAAGTCTGACCACCACGCAATGGACAGTGTGCCTTTaGTTGCTTTATTTGGATGTC +
Preference number: 2 (lower is better)
Translates to: RVTGTSPHAPPLSLTTTQWTVCL*LLYLDV
Trigger: GACATCCAAATAAAGCAAGCAAAGGCACACTGTCCA...TTGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp CTTGCCATCAGTTTTAGCCGCTGCTCTAAGTGTTTTCCAAACTCTTCCTCAGGCAGGAACGTCTCCGCATaGTCCACCATTAAGTCTGAC +
Preference number: 2 (lower is better)
Translates to: LAISFSRCSKCFPNSSSGRNVSA*STIKSD
Trigger: GTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCT...GCCTGAGGAAGAGTTTGGAAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGAGGACTCCATCCCAATaGACTCTTGGACCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMRTPSQ*TLGPRE
Trigger: TTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp ATCAGATCCACATATCTAACAACAAGTGGGGCGAACAGGTCCTGCAGGTGTTTGTGTTTCCCTGACATTTaGGATGGCAGGAGCAATGCA +
Preference number: 2 (lower is better)
Translates to: IRSTYLTTSGANRSCRCLCFPDI*DGRSNA
Trigger: TGCATTGCTCCTGCCATCTCAAATGTCAGGGAAACA...CAAACACCTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGTGGATCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGTGTGTGAGAGAACATaGGATTCCAGAGTGTGGACA +
Preference number: 2 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMVCERT*DSRVWT
Trigger: TGTCCACACTCTGGAATCTCATGTTCTCTCACACAC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp TGTCCACTGCAAAGAGTGACAGGAACGTCTCCGCATGCTCCACCATTAAGTCTGGCAAGTAGTGTGGAATaGGGTACTTCTCTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: CPLQRVTGTSPHAPPLSLASSVE*GTSLKR
Trigger: TCTTTTCAGAGAAGTACCTCATTCCACACTACTTGC...CAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp GCATCAACCATAACATTAAACATGGTGCATATTGACTGTGGGACTCGAAAATCTCTTGACTGGCTCCCATaGCTCCCGCTCAAAGCCCCT +
Preference number: 2 (lower is better)
Translates to: ASTITLNMVHIDCGTRKSLDWLP*LPLKAP
Trigger: AGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAAG...AGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGTTATGGTTGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATATGCAAAGCTGGGTTTaGTGGGACACAAGTGGTCCA +
Preference number: 2 (lower is better)
Translates to: RHALITGLHPNGLLDPENMQSWV*WDTSGP
Trigger: TGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCAT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp GCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGTCTAAGAAAACCTGACACATaGAGCCAGAGAATGTGGGGT +
Preference number: 2 (lower is better)
Translates to: ALITGLHPNGLLDPENGLRKPDT*SQRMWG
Trigger: ACCCCACATTCTCTGGCTGCATGTGTCAGGTTTTCT...TAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp CCCTCACTCACTGACGCTGTAGCTTCCTCCACAGTGAGACGGTTTCGGATGGTCTTTCTTCTATTTATTTaGCCACGACCAAGGCATTTT +
Preference number: 2 (lower is better)
Translates to: PSLTDAVASSTVRRFRMVFLLFI*PRPRHF
Trigger: AAAATGCCTTGGTCGTGGCCAAATAAATAGAAGAAA...GACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CAA 90 bp GGTAGATTTGGTACTTTGGGTAGGTTCACATTGGGTAGGTTCACATaGGGTAGGTTACTGGTTAAACTCTTGACTGGCTCCCATGACTCC +
Preference number: 2 (lower is better)
Translates to: GRFGTLGRFTLGRFT*GRLLVKLLTGSHDS
Trigger: GGAGTCATGGGAGCCAGTCAAGAGTTTAACCAGTAACCTACCCAATGTGAACCTACCCAATGTGAACCTACCCAAAGTACCAAATCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp ATCAGATCCACATATCTAACAACAAGTGGGGCGAACAGGTCCTGCAGGTGTTTGACAACCAAGAAGAATTaGGGCACAGAAGGAGACTAC +
Preference number: 2 (lower is better)
Translates to: IRSTYLTTSGANRSCRCLTTKKN*GTEGDY
Trigger: GTAGTCTCCTTCTGTGCCTCAATTCTTCTTGGTTGT...CAAACACCTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGTGGATCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGAGGACTCCATCCCAATaGACTCTTGGACCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRRTPSQ*TLGPRE
Trigger: TTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp AGAGTGACAGGAACGTCTCCGCATGCTCCACCATTAAGTCTGACCACCACGCAAAAATTTGGGAACTACTaGATTAACCATTCAGCATGC +
Preference number: 2 (lower is better)
Translates to: RVTGTSPHAPPLSLTTTQKFGNY*INHSAC
Trigger: GCATGCTGAATGGTTAATCCAGTAGTTCCCAAATTT...TTGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp GCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGTCTACTACAAAAGAGGATTTaGGCATGCAAGAGGCTTAGG +
Preference number: 2 (lower is better)
Translates to: ALITGLHPNGLLDPENGLLQKRI*ACKRLR
Trigger: CCTAAGCCTCTTGCATGCCCAAATCCTCTTTTGTAG...TAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CAA 90 bp CGTGATCCTATCCCATCTCTGGCTTTCGGATTAGTAATTACATGGTaGACTTTACCCAATCCAACCAACCATTATGTCCTGGGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: RDPIPSLAFGLVITW*TLPNPTNHYVLGWE
Trigger: TTCCCAGCCCAGGACATAATGGTTGGTTGGATTGGGTAAAGTCAACCATGTAATTACTAATCCGAAAGCCAGAGATGGGATAGGATCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CAA 90 bp ATCTGTGGGATGCCTAGAGGGATGTTAACTGGTAGATTTGGTACTTaGGGTAGGTTCACATTGGGTAGGTTCACATTGGGTAGGTTACTG +
Preference number: 2 (lower is better)
Translates to: ICGMPRGMLTGRFGT*GRFTLGRFTLGRLL
Trigger: CAGTAACCTACCCAATGTGAACCTACCCAATGTGAACCTACCCAAAGTACCAAATCTACCAGTTAACATCCCTCTAGGCATCCCACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp CTTGCCATCAGTTTTAGCCGCTGCTCTAAGTGTTTTCCAAACTCTTCCTCAGGCACTAAAGACATGCATTaGTTACAGGACTCCATCCCA +
Preference number: 2 (lower is better)
Translates to: LAISFSRCSKCFPNSSSGTKDMH*LQDSIP
Trigger: TGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGT...GCCTGAGGAAGAGTTTGGAAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCACAGAACTTCCACATaGATACACTTACACCTCTGG +
Preference number: 2 (lower is better)
Translates to: RHALITGLHPNGLLDPENHRTST*IHLHLW
Trigger: CCAGAGGTGTAAGTGTATTCATGTGGAAGTTCTGTG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp ATCAGATCCACATATCTAACAACAAGTGGGGCGAACAGGTCCTGCAGGTGTTTGGTCCTGGGCTGGGAATaGTGGAACAATTATTTGTTA +
Preference number: 2 (lower is better)
Translates to: IRSTYLTTSGANRSCRCLVLGWE*WNNYLL
Trigger: TAACAAATAATTGTTCCAGCATTCCCAGCCCAGGAC...CAAACACCTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGTGGATCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp GCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGTCTATGGACCGCTGTTTTCTaGTGTCCATTAAGAAAAGAG +
Preference number: 2 (lower is better)
Translates to: ALITGLHPNGLLDPENGLWTAVF*CPLRKE
Trigger: CTCTTTTCTTAATGGACACCAGAAAACAGCGGTCCA...TAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCACCTCTGGTCAAGTTaGGTGTGGTTTTCAAATCAC +
Preference number: 2 (lower is better)
Translates to: RHALITGLHPNGLLDPENHLWSS*VWFSNH
Trigger: GTGATTTGAAAACCACACCCAACTTGACCAGAGGTG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp ATCAGATCCACATATCTAACAACAAGTGGGGCGAACAGGTCCTGCAGGTGTTTGCATTATGTCCTGGGCTaGGAATGCTGGAACAATTAT +
Preference number: 2 (lower is better)
Translates to: IRSTYLTTSGANRSCRCLHYVLG*ECWNNY
Trigger: ATAATTGTTCCAGCATTCCCAGCCCAGGACATAATG...CAAACACCTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGTGGATCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CAA 90 bp GGTGGACAGTGTGCCTTTGCTTGCTTTATTTGGATGTCATGTGTTTaGTGTGTGAGAGAACATGAGATTCCAGAGTGTGGACACATCAAG +
Preference number: 2 (lower is better)
Translates to: GGQCAFACFIWMSCV*CVREHEIPECGHIK
Trigger: CTTGATGTGTCCACACTCTGGAATCTCATGTTCTCTCACACACAAAACACATGACATCCAAATAAAGCAAGCAAAGGCACACTGTCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATACTAAAGACATGCATTaGTTACAGGACTCCATCCCA +
Preference number: 2 (lower is better)
Translates to: RHALITGLHPNGLLDPENTKDMH*LQDSIP
Trigger: TGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGACACACCTAGCAGCTaGACTATGTATTCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: RHALITGLHPNGLLDPENDTPSS*TMYSFH
Trigger: ATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp CTAGTAATAGCTGGACCAAGACCCATGAGGCAGCAGTTGTGGAAACTGAACATTTGGTACCCACATACATaGAACAGAGACATGGAAACA +
Preference number: 2 (lower is better)
Translates to: LVIAGPRPMRQQLWKLNIWYPHT*NRDMET
Trigger: TGTTTCCATGTCTCTGTTTCATGTATGTGGGTACCA...AATGTTCAGTTTCCACAACTGCTGCCTCATGGGTCTTGGTCCAGCTATTACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATAACTACATGGATAAATaGAAAGCTGGGTTTGCTGGG +
Preference number: 2 (lower is better)
Translates to: RHALITGLHPNGLLDPENNYMDK*KAGFAG
Trigger: CCCAGCAAACCCAGCTTTGCATTTATCCATGTAGTT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGATCACGTGGCCCCCTTaGTATGACAATGAAAATAAT +
Preference number: 2 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMITWPP*YDNENN
Trigger: ATTATTTTCATTGTCATAGCAAGGGGGCCACGTGAT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp GCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGTCTACAGTGTGCCTTTGCTTaGTTTATTTGGATGTCATGT +
Preference number: 2 (lower is better)
Translates to: ALITGLHPNGLLDPENGLQCAFA*FIWMSC
Trigger: ACATGACATCCAAATAAAGCAAGCAAAGGCACACTG...TAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp CTTGCCATCAGTTTTAGCCGCTGCTCTAAGTGTTTTCCAAACTCTTCCTCAGGCTTAACAATCCCAGCATaGTTTGAAATTGGCGTCTCA +
Preference number: 2 (lower is better)
Translates to: LAISFSRCSKCFPNSSSGLTIPA*FEIGVS
Trigger: TGAGACGCCAATTTCAAAGCATGCTGGGATTGTTAA...GCCTGAGGAAGAGTTTGGAAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGATCTCATGGGGATGGTaGTTGACAGAAAATTACCTA +
Preference number: 2 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMISWGW*LTENYL
Trigger: TAGGTAATTTTCTGTCAACCACCATCCCCATGAGAT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTTGGTAAACATCTCATaGGGATGGTGGTTGACAGAA +
Preference number: 2 (lower is better)
Translates to: RHALITGLHPNGLLDPENLVNIS*GWWLTE
Trigger: TTCTGTCAACCACCATCCCCATGAGATGTTTACCAA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTTGCTGGGACACAAGTaGTCCATTGCTTTTAGTTTT +
Preference number: 2 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMLLGHK*SIAFSF
Trigger: AAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATATCTGTAGTACAGGATaGAGCATCATTTTGTTCTGC +
Preference number: 2 (lower is better)
Translates to: RHALITGLHPNGLLDPENICSTG*SIILFC
Trigger: GCAGAACAAAATGATGCTTCATCCTGTACTACAGAT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTGGTACCCACATACATaGAACAGAGACATGGAAACA +
Preference number: 2 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRWYPHT*NRDMET
Trigger: TGTTTCCATGTCTCTGTTTCATGTATGTGGGTACCA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATAGAAGACAGTTGGTCTaGAACTTACTTGATGCTACT +
Preference number: 2 (lower is better)
Translates to: RHALITGLHPNGLLDPENRRQLV*NLLDAT
Trigger: AGTAGCATCAAGTAAGTTTCAGACCAACTGTCTTCT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGAACAGACTAAAGACATaGATTGATTACAGGACTCCA +
Preference number: 2 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMNRLKT*IDYRTP
Trigger: TGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGACATGGAAACACACTTaGTTCCATGTCCACTTCCAA +
Preference number: 2 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRTWKHT*FHVHFQ
Trigger: TTGGAAGTGGACATGGAAGCAAGTGTGTTTCCATGT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTTGGTAAACATCTCATaGGGATGGTGGTTGACAGAA +
Preference number: 2 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRLVNIS*GWWLTE
Trigger: TTCTGTCAACCACCATCCCCATGAGATGTTTACCAA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTTGCTGGGACACAAGTaGTCCATTGCTTTTAGTTTT +
Preference number: 2 (lower is better)
Translates to: RHALITGLHPNGLLDPENLLGHK*SIAFSF
Trigger: AAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp GCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGTCTAATGAGGCAGCAGTTGTaGAAACTGAACATTTCATTT +
Preference number: 2 (lower is better)
Translates to: ALITGLHPNGLLDPENGLMRQQL*KLNISF
Trigger: AAATGAAATGTTCAGTTTCCACAACTGCTGCCTCAT...TAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CAA 90 bp AGAGGGATGTTAACTGGTAGATTTGGTACTTTGGGTAGGTTCACATaGGGTAGGTTCACATTGGGTAGGTTACTGGTTAAACTCTTGACT +
Preference number: 2 (lower is better)
Translates to: RGMLTGRFGTLGRFT*GRFTLGRLLVKLLT
Trigger: AGTCAAGAGTTTAACCAGTAACCTACCCAATGTGAACCTACCCAATGTGAACCTACCCAAAGTACCAAATCTACCAGTTAACATCCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGATCTGTAGTACAGGATaGAGCATCATTTTGTTCTGC +
Preference number: 2 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRICSTG*SIILFC
Trigger: GCAGAACAAAATGATGCTTCATCCTGTACTACAGAT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTATCTGTAGTACAGGATaGAGCATCATTTTGTTCTGC +
Preference number: 2 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFICSTG*SIILFC
Trigger: GCAGAACAAAATGATGCTTCATCCTGTACTACAGAT...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp GCATCAACCATAACATTAAACATGGTGCATATTGACTGTGGGACTCGAAAATCTGTTGCAGTACTTCGATaGCTAGTTCAGCAAGACGGA +
Preference number: 2 (lower is better)
Translates to: ASTITLNMVHIDCGTRKSVAVLR*LVQQDG
Trigger: TCCGTCTTGCTGAACTAGTCATCGAAGTACTGCAAC...AGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGTTATGGTTGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCATGAAACAGAGACATaGAAACACACTTGCTTCCAT +
Preference number: 2 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFHETET*KHTCFH
Trigger: ATGGAAGCAAGTGTGTTTCCATGTCTCTGTTTCATG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGCATGAAACAGAGACATaGAAACACACTTGCTTCCAT +
Preference number: 2 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRHETET*KHTCFH
Trigger: ATGGAAGCAAGTGTGTTTCCATGTCTCTGTTTCATG...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGAACAGACTAAAGACATaGATTGATTACAGGACTCCA +
Preference number: 2 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRNRLKT*IDYRTP
Trigger: TGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGATCTCATGGGGATGGTaGTTGACAGAAAATTACCTA +
Preference number: 2 (lower is better)
Translates to: VLLTKGTHLAAELCILSMISWGW*LTENYL
Trigger: TAGGTAATTTTCTGTCAACCACCATCCCCATGAGAT...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp GCATCAACCATAACATTAAACATGGTGCATATTGACTGTGGGACTCGAAAATCTCATGTGTTTTGTGTGTaGGAGAACATGAGATTCCAG +
Preference number: 2 (lower is better)
Translates to: ASTITLNMVHIDCGTRKSHVFCV*ENMRFQ
Trigger: CTGGAATCTCATGTTCTCTCACACACAAAACACATG...AGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGTTATGGTTGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGAACAGACTAAAGACATaGATTGATTACAGGACTCCA +
Preference number: 2 (lower is better)
Translates to: VLLTKGTHLAAELCILSMNRLKT*IDYRTP
Trigger: TGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp GCATCAACCATAACATTAAACATGGTGCATATTGACTGTGGGACTCGAAAATCTAGGCAAAAAGCAAGATaGATCCACTACTTTCCACAG +
Preference number: 2 (lower is better)
Translates to: ASTITLNMVHIDCGTRKSRQKAR*IHYFPQ
Trigger: CTGTGGAAAGTAGTGGATCCATCTTGCTTTTTGCCT...AGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGTTATGGTTGATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp CAATTCTTAAGTGTTTCTCCCTCGATGCATAACAATGAACTCATTACCACTGGTATCACGTGGCCCCCTTaGTATGACAATGAAAATAAT +
Preference number: 2 (lower is better)
Translates to: QFLSVSPSMHNNELITTGITWPP*YDNENN
Trigger: ATTATTTTCATTGTCATAGCAAGGGGGCCACGTGAT...ACCAGTGGTAATGAGTTCATTGTTATGCATCGAGGGAGAAACACTTAAGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGACTAAAGACATGCATTaGTTACAGGACTCCATCCCA +
Preference number: 2 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRTKDMH*LQDSIP
Trigger: TGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGT...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGGACACACCTAGCAGCTaGACTATGTATTCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRDTPSS*TMYSFH
Trigger: ATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTC...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp CAATTCTTAAGTGTTTCTCCCTCGATGCATAACAATGAACTCATTACCACTGGTAGAACCATAGCTTCTTaGATTTACTCAAAGTGCCTT +
Preference number: 2 (lower is better)
Translates to: QFLSVSPSMHNNELITTGRTIAS*IYSKCL
Trigger: AAGGCACTTTGAGTAAATTCAAGAAGCTATGGTTCT...ACCAGTGGTAATGAGTTCATTGTTATGCATCGAGGGAGAAACACTTAAGAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp GCATCAACCATAACATTAAACATGGTGCATATTGACTGTGGGACTCGAAAATCTGGTAACAATGAAAAGTaGTTAATGCCTTTGAGAGTG +
Preference number: 2 (lower is better)
Translates to: ASTITLNMVHIDCGTRKSGNNEK*LMPLRV
Trigger: CACTCTCAAAGGCATTAATCACTTTTCATTGTTACC...AGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGTTATGGTTGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGAACTACATGGATAAATaGAAAGCTGGGTTTGCTGGG +
Preference number: 2 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRNYMDK*KAGFAG
Trigger: CCCAGCAAACCCAGCTTTGCATTTATCCATGTAGTT...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGTTGGTAAACATCTCATaGGGATGGTGGTTGACAGAA +
Preference number: 2 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRLVNIS*GWWLTE
Trigger: TTCTGTCAACCACCATCCCCATGAGATGTTTACCAA...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR TCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGAGAAGACAGTTGGTCTaGAACTTACTTGATGCTACT +
Preference number: 2 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRRRQLV*NLLDAT
Trigger: AGTAGCATCAAGTAAGTTTCAGACCAACTGTCTTCT...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR GCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGAACAGACTAAAGACATaGATTGATTACAGGACTCCA +
Preference number: 2 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRNRLKT*IDYRTP
Trigger: TGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGCTGGGCTGGGAATGCTaGAACAATTATTTGTTAATA +
Preference number: 2 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRLGWEC*NNYLLI
Trigger: TATTAACAAATAATTGTTCCAGCATTCCCAGCCCAG...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR TCA 72 bp GATGGCGTGTGTATGCTAGTCAGGTGTTCCCCTCACTaGTGGCCCAAGGTGGACAGTGTGCCTTTGCTTGCT +
Preference number: 3 (lower is better)
Translates to: DGVCMLVRCSPH*WPKVDSVPLLA
Trigger: AGCAAGCAAAGGCACACTGTCCACCTTGGGCCATCAGTGAGGGGAACACCTGACTAGCATACACACGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp GGCCACGTCCATCCCGGGTTTAGGCACGTCCACATACTTGGAAGCTGCCTTCACCAGCATGCTTTGAAATaGGCGTCTCAGCCACTTTTG +
Preference number: 3 (lower is better)
Translates to: GHVHPGFRHVHILGSCLHQHALK*ASQPLL
Trigger: CAAAAGTGGCTGAGACGCCAATTTCAAAGCATGCTG...GTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 72 bp ATGTCCACTGCAAAGAGTGACAGGAACGTCTCCGCATaGTCCACCATTAAGTCTGACCACCACGCAAAGGCC +
Preference number: 3 (lower is better)
Translates to: MSTAKSDRNVSA*STIKSDHHAKA
Trigger: GGCCTTTGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CCA 72 bp TTGACTGGCTCCCATGACTCCCGCTCAAAGCCCCTGTaGATAGATTGTGCAATGGAGGACTCCATCAGATCC +
Preference number: 3 (lower is better)
Translates to: LTGSHDSRSKPL*IDCAMEDSIRS
Trigger: GGATCTGATGGAGTCCTCCATTGCACAATCTATCCACAGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 72 bp CACGCAAAGGCCTCGGCGTGGTGCTCCTCGTTTTGTTaGAGTACTTCGATGACTAGTTCAGCAAGACGGATT +
Preference number: 3 (lower is better)
Translates to: HAKASAWCSSFC*STSMTSSARRI
Trigger: AATCCGTCTTGCTGAACTAGTCATCGAAGTACTGCAACAAAACGAGGAGCACCACGCCGAGGCCTTTGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CCA 72 bp ACCATTAAGTCTGACCACCACGCAAAGGCCTCGGCGTaGTGCTCCTCGTTTTGTTGCAGTACTTCGATGACT +
Preference number: 3 (lower is better)
Translates to: TIKSDHHAKASA*CSSFCCSTSMT
Trigger: AGTCATCGAAGTACTGCAACAAAACGAGGAGCACCACGCCGAGGCCTTTGCGTGGTGGTCAGACTTAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp AGAGTGACAGGAACGTCTCCGCATGCTCCACCATTAAGTCTGACCACCACGCAACAATCCCAGCATGCTTaGAAATTGGCGTCTCAGCCA +
Preference number: 3 (lower is better)
Translates to: RVTGTSPHAPPLSLTTTQQSQHA*KLASQP
Trigger: TGGCTGAGACGCCAATTTCAAAGCATGCTGGGATTG...TTGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp CCCTCACTCACTGACGCTGTAGCTTCCTCCACAGTGAGACGGTTTCGGATGGTCCCACTGGTACACAATTaGCATTGTCACACAGACAAA +
Preference number: 3 (lower is better)
Translates to: PSLTDAVASSTVRRFRMVPLVHN*HCHTDK
Trigger: TTTGTCTGTGTGACAATGCAAATTGTGTACCAGTGG...GACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR TCA 72 bp CGGCGTGGTGCTCCTCGTTTTGTTGCAGTACTTCGATaGCTAGTTCAGCAAGACGGATTGTGTCTTCGAGCT +
Preference number: 3 (lower is better)
Translates to: RRGAPRFVAVLR*LVQQDGLCLRA
Trigger: AGCTCGAAGACACAATCCGTCTTGCTGAACTAGTCATCGAAGTACTGCAACAAAACGAGGAGCACCACGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 72 bp ATTAAGTCTGACCACCACGCAAAGGCCTCGGCGTGGTaGTCCTCGTTTTGTTGCAGTACTTCGATGACTAGT +
Preference number: 3 (lower is better)
Translates to: IKSDHHAKASAW*SSFCCSTSMTS
Trigger: ACTAGTCATCGAAGTACTGCAACAAAACGAGGAGCACCACGCCGAGGCCTTTGCGTGGTGGTCAGACTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTAAGTCCAGAGTCAACTaGGAGCCCCTGAAGCTGGCT +
Preference number: 3 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFKSRVN*EPLKLA
Trigger: AGCCAGCTTCAGGGGCTCCAAGTTGACTCTGGACTT...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 72 bp CCCCTCACTGATGGCCCAAGGTGGACAGTGTGCCTTTaGTTGCTTTATTTGGATGTCATGTGTTTTGTGTGT +
Preference number: 3 (lower is better)
Translates to: PLTDGPRWTVCL*LLYLDVMCFVC
Trigger: ACACACAAAACACATGACATCCAAATAAAGCAAGCAAAGGCACACTGTCCACCTTGGGCCATCAGTGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 72 bp GGTGTTCCCCTCACTGATGGCCCAAGGTGGACAGTGTaGCTTTGCTTGCTTTATTTGGATGTCATGTGTTTT +
Preference number: 3 (lower is better)
Translates to: GVPLTDGPRWTV*LCLLYLDVMCF
Trigger: AAAACACATGACATCCAAATAAAGCAAGCAAAGGCACACTGTCCACCTTGGGCCATCAGTGAGGGGAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CCA 72 bp TTTGAGATGGCAGGAGCAATGCACCTGCTACATCCCTaGAAACAAGAAAGAAGTCCAGAGTCAACTTGGAGC +
Preference number: 3 (lower is better)
Translates to: FEMAGAMHLLHP*KQERSPESTWS
Trigger: GCTCCAAGTTGACTCTGGACTTCTTTCTTGTTTCCAGGGATGTAGCAGGTGCATTGCTCCTGCCATCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGACATGGAAACACACTaGCTTCCATGTCCACTTCCA +
Preference number: 3 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMDMETH*LPCPLP
Trigger: TGGAAGTGGACATGGAAGCAAGTGTGTTTCCATGTC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp GCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGTCTAGTTCAGCAAGACGGATaGTGTCTTCGAGCTTTTTGG +
Preference number: 3 (lower is better)
Translates to: ALITGLHPNGLLDPENGLVQQDG*CLRAFW
Trigger: CCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAAC...TAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 72 bp GACTCAATCATGTCACTTGCCATCAGTTTTAGCCGCTaGTCTAAGTGTTTTCCAAACTCTTCCTCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: DSIMSLAISFSR*SKCFPNSSSGQ
Trigger: CTGGCCTGAGGAAGAGTTTGGAAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAGTGACATGATTGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CCA 72 bp GGTTTCGGATGGTCTCATAGGTCTTGCTGTTTAAGGTaGAATCCAGGACCCCTTGCAATCGGAAATCTCTAT +
Preference number: 3 (lower is better)
Translates to: GFGWSHRSCCLR*NPGPLAIGNLY
Trigger: ATAGAGATTTCCGATTGCAAGGGGTCCTGGATTCCACCTTAAACAGCAAGACCTATGAGACCATCCGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTCATGGGGATGGTGGTaGACAGAAAATTACCTAATG +
Preference number: 3 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMSWGWW*TENYLM
Trigger: CATTAGGTAATTTTCTGTCAACCACCATCCCCATGA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGACATGGAAACACACTaGCTTCCATGTCCACTTCCA +
Preference number: 3 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFDMETH*LPCPLP
Trigger: TGGAAGTGGACATGGAAGCAAGTGTGTTTCCATGTC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTGGACACATCAAGTCTaGCACACAGAACTTCCACAT +
Preference number: 3 (lower is better)
Translates to: RHALITGLHPNGLLDPENWTHQV*HTELPH
Trigger: ATGTGGAAGTTCTGTGTGCAAGACTTGATGTGTCCA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp CTTGCCATCAGTTTTAGCCGCTGCTCTAAGTGTTTTCCAAACTCTTCCTCAGGCACAGTGTGCCTTTGCTaGCTTTATTTGGATGTCATG +
Preference number: 3 (lower is better)
Translates to: LAISFSRCSKCFPNSSSGTVCLC*LYLDVM
Trigger: CATGACATCCAAATAAAGCAAGCAAAGGCACACTGT...GCCTGAGGAAGAGTTTGGAAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR TCA 72 bp TTCCAAACTCTTCCTCAGGCCAGTGTAGGTCACGGATaGAAGTCTGAAGGGCATCAAGTTTCCAGAACAAAT +
Preference number: 3 (lower is better)
Translates to: FQTLPQASVGHG*KSEGHQVSRTN
Trigger: ATTTGTTCTGGAAACTTGATGCCCTTCAGACTTTCATCCGTGACCTACACTGGCCTGAGGAAGAGTTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 72 bp GAGAATGTGGGGTTGTCTGAATTAACAATCCCAGCATaGTTTGAAATTGGCGTCTCAGCCACTTTTGCAGAG +
Preference number: 3 (lower is better)
Translates to: ENVGLSELTIPA*FEIGVSATFAE
Trigger: CTCTGCAAAAGTGGCTGAGACGCCAATTTCAAAGCATGCTGGGATTGTTAATTCAGACAACCCCACATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CCA 72 bp GAAGAGAGCAGATCTTACCAAAAGACTAGTAATAGCTaGACCAAGACCCATGAGGCAGCAGTTGTGGAAACT +
Preference number: 3 (lower is better)
Translates to: EESRSYQKTSNS*TKTHEAAVVET
Trigger: AGTTTCCACAACTGCTGCCTCATGGGTCTTGGTCCAGCTATTACTAGTCTTTTGGTAAGATCTGCTCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR TCA 72 bp AAACTTTCACAGAAGACAGTTGGTCTGAAACTTACTTaGTGCTACTTCCTGATCACGTGGCCCCCTTGCTAT +
Preference number: 3 (lower is better)
Translates to: KLSQKTVGLKLT*CYFLITWPPCY
Trigger: ATAGCAAGGGGGCCACGTGATCAGGAAGTAGCATCAAGTAAGTTTCAGACCAACTGTCTTCTGTGAAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR TCA 72 bp AATTATGTAGTCATCAATGTCTGTTTCCCTGACATTTaGGATGGCAGGAGCAATGCACCTGCTACATCCCTG +
Preference number: 3 (lower is better)
Translates to: NYVVINVCFPDI*DGRSNAPATSL
Trigger: CAGGGATGTAGCAGGTGCATTGCTCCTGCCATCTCAAATGTCAGGGAAACAGACATTGATGACTACATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp CATTACCACTGGTACACAATTTGCATTGTCACACAGACAAAATCGAGAGGGGAGTCATGGGGATGGTGGTaGACAGAAAATTACCTAATG +
Preference number: 3 (lower is better)
Translates to: HYHWYTICIVTQTKSRGESWGWW*TENYLM
Trigger: CATTAGGTAATTTTCTGTCAACCACCATCCCCATGA...CTCCCCTCTCGATTTTGTCTGTGTGACAATGCAAATTGTGTACCAGTGGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGAAATCAGGAAACCATTaGCTAATCTTGGTACCACGC +
Preference number: 3 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRKSGNH*LILVPR
Trigger: GCGTGGTACCAAGATTAGCAAATGGTTTCCTGATTT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp CTAGTAATAGCTGGACCAAGACCCATGAGGCAGCAGTTGTGGAAACTGAACATTGGTACACAATTTGCATaGTCACACAGACAAAATCGA +
Preference number: 3 (lower is better)
Translates to: LVIAGPRPMRQQLWKLNIGTQFA*SHRQNR
Trigger: TCGATTTTGTCTGTGTGACAATGCAAATTGTGTACC...AATGTTCAGTTTCCACAACTGCTGCCTCATGGGTCTTGGTCCAGCTATTACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR TCA 72 bp GAGGCAGCAGTTGTGGAAACTGAACATTTCATTTCGTaGTCCTATCCCATCTCTGGCTTTCGGATTAGTAAT +
Preference number: 3 (lower is better)
Translates to: EAAVVETEHFIS*SYPISGFRISN
Trigger: ATTACTAATCCGAAAGCCAGAGATGGGATAGGATCACGAAATGAAATGTTCAGTTTCCACAACTGCTGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 72 bp TTTCTCTCTTTTTCCCTACAAAAGAGGATTTGGGCATaGAAGAGGCTTAGGTCAGAGGTAAAGAGGTTCAAG +
Preference number: 3 (lower is better)
Translates to: FLSFSLQKRIWA*KRLRSEVKRFK
Trigger: CTTGAACCTCTTTACCTCTGACCTAAGCCTCTTGCATGCCCAAATCCTCTTTTGTAGGGAAAAAGAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CCA 72 bp CATACATTTCTCTCTTTTTCCCTACAAAAGAGGATTTaGGCATGCAAGAGGCTTAGGTCAGAGGTAAAGAGG +
Preference number: 3 (lower is better)
Translates to: HTFLSFSLQKRI*ACKRLRSEVKR
Trigger: CCTCTTTACCTCTGACCTAAGCCTCTTGCATGCCCAAATCCTCTTTTGTAGGGAAAAAGAGAGAAATGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTCATGGGGATGGTGGTaGACAGAAAATTACCTAATG +
Preference number: 3 (lower is better)
Translates to: VLLTKGTHLAAELCILSMSWGWW*TENYLM
Trigger: CATTAGGTAATTTTCTGTCAACCACCATCCCCATGA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp GCATCAACCATAACATTAAACATGGTGCATATTGACTGTGGGACTCGAAAATCTGACATGGAAACACACTaGCTTCCATGTCCACTTCCA +
Preference number: 3 (lower is better)
Translates to: ASTITLNMVHIDCGTRKSDMETH*LPCPLP
Trigger: TGGAAGTGGACATGGAAGCAAGTGTGTTTCCATGTC...AGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGTTATGGTTGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp GCATCAACCATAACATTAAACATGGTGCATATTGACTGTGGGACTCGAAAATCTGGTAGATTTGGTACTTaGGGTAGGTTCACATTGGGT +
Preference number: 3 (lower is better)
Translates to: ASTITLNMVHIDCGTRKSGRFGT*GRFTLG
Trigger: ACCCAATGTGAACCTACCCAAAGTACCAAATCTACC...AGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGTTATGGTTGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGCCACTTTTGCAGAGGTaGTGTCAAAAAGTGGCTGAG +
Preference number: 3 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRPLLQR*CQKVAE
Trigger: CTCAGCCACTTTTTGACACAACCTCTGCAAAAGTGG...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 72 bp CCCAATCCAACCAACCATTATGTCCTGGGCTGGGAATaGTGGAACAATTATTTGTTAATAAAGCCCTTTAAT +
Preference number: 3 (lower is better)
Translates to: PNPTNHYVLGWE*WNNYLLIKPFN
Trigger: ATTAAAGGGCTTTATTAACAAATAATTGTTCCAGCATTCCCAGCCCAGGACATAATGGTTGGTTGGATTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CCA 72 bp GATCCTGGTTACTACATAACGCCCCACATTTATTGTTaGTTTTCCTCTAAAGGCTGTCTTCTGAGATTTCTT +
Preference number: 3 (lower is better)
Translates to: DPGYYITPHIYC*FSSKGCLLRFL
Trigger: AAGAAATCTCAGAAGACAGCCTTTAGAGGAAAACCAACAATAAATGTGGGGCGTTATGTAGTAACCAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR GCA 72 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATaGATTGATTACAGGACTCCATCCCAATGGACTCTT +
Preference number: 3 (lower is better)
Translates to: NYLMGLTNRLKT*IDYRTPSQWTL
Trigger: AAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR GCA 72 bp TTTTTGAATGGTATTGATGCTCTTGGCCCATTTCCATaGTGCAAAGTTTTGTTGATTGAGCTTTGGCATCAA +
Preference number: 3 (lower is better)
Translates to: FLNGIDALGPFP*CKVLLIELWHQ
Trigger: TTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGCATCAATACCATTCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGAAATCAGGAAACCATTaGCTAATCTTGGTACCACGC +
Preference number: 3 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRKSGNH*LILVPR
Trigger: GCGTGGTACCAAGATTAGCAAATGGTTTCCTGATTT...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGTTGGGTAGGTTCACATaGGGTAGGTTACTGGTTAAA +
Preference number: 3 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRLGRFT*GRLLVK
Trigger: TTTAACCAGTAACCTACCCAATGTGAACCTACCCAA...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR TCA 72 bp TTTTGTTCTGCTAACAAAAGGGACACACCTAGCAGCTaGACTATGTATTCTTTCCATGAACAGTGTTTAAGA +
Preference number: 3 (lower is better)
Translates to: FCSANKRDTPSS*TMYSFHEQCLR
Trigger: TCTTAAACACTGTTCATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
3UTR TCA 72 bp AGAAGAGAGCAAGTAGTGTGGAATGAGGTACTTCTCTaGAAAGAGAGTTGGAATAAAAAGATTGGTTTCTTC +
Preference number: 3 (lower is better)
Translates to: RREQVVWNEVLL*KESWNKKIGFF
Trigger: GAAGAAACCAATCTTTTTATTCCAACTCTCTTTTCAGAGAAGTACCTCATTCCACACTACTTGCTCTCTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR TCA 72 bp AGACTTCCAAGGCATCAGAAAGAGTTAAATAGAACCTaGATATTGCATTCTTCAACTCTTGTTTTACTTCCA +
Preference number: 3 (lower is better)
Translates to: RLPRHQKELNRT*ILHSSTLVLLP
Trigger: TGGAAGTAAAACAAGAGTTGAAGAATGCAATATTCAGGTTCTATTTAACTCTTTCTGATGCCTTGGAAGTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AGAGTGACAGGAACGTCTCCGCATGCTCCACCATTAAGTCTGACCACCACGCAAGAGCAGCCCCCACTCTaGACCATGCGGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: RVTGTSPHAPPLSLTTTQEQPPL*TMRATR
Trigger: CCGTGTGGCCCGCATGGTGCAGAGTGGGGGCTGCTC...TTGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp CTTGCCATCAGTTTTAGCCGCTGCTCTAAGTGTTTTCCAAACTCTTCCTCAGGCCATCCCGGCGCTGCCTaGCGAGCCCTCGCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: LAISFSRCSKCFPNSSSGHPGAA*RALAGA
Trigger: CGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGATG...GCCTGAGGAAGAGTTTGGAAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp CCCTCACTCACTGACGCTGTAGCTTCCTCCACAGTGAGACGGTTTCGGATGGTCAGCCCAGCACATCCTTaGCCCTCTCCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSLTDAVASSTVRRFRMVSPAHP*PSPLPG
Trigger: TCCTGGAAGAGGAGAGGGGCAAGGATGTGCTGGGCT...GACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCATCCCGGCGCTGCCTaGCGAGCCCTCGCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENHPGAA*RALAGA
Trigger: CGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGATG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCATCCCGGCGCTGCCTaGCGAGCCCTCGCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFHPGAA*RALAGA
Trigger: CGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGATG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCCTCGCTGGTGCGGCTaGGAGACAGGCGCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENPRWCG*ETGALQ
Trigger: CTGGAGCGCGCCTGTCTCCCAGCCGCACCAGCGAGG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AGAGTGACAGGAACGTCTCCGCATGCTCCACCATTAAGTCTGACCACCACGCAAACACCTGGCCAGGACTaGACCAGCCCAGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: RVTGTSPHAPPLSLTTTQTPGQD*TSPGKN
Trigger: ATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGT...TTGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCGAGCCCTCGCTGGTaGGGCTGGGAGACAGGCGCG +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGPSPRW*GWETGA
Trigger: CGCGCCTGTCTCCCAGCCGCACCAGCGAGGGCTCGG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGCTGCCGAGCCCTCGCTaGTGCGGCTGGGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRLPSPR*CGWETG
Trigger: GCCTGTCTCCCAGCCGCACCAGCGAGGGCTCGGCAG...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGCCCCACTCTGCACCATaGGGGCCACACGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMPHSAP*GPHGHS
Trigger: AGAGTGACCGTGTGGCCCGCATGGTGCAGAGTGGGG...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGAGCAGCCCCCACTCTaGACCATGCGGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFEQPPL*TMRATR
Trigger: CCGTGTGGCCCGCATGGTGCAGAGTGGGGGCTGCTC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGAGCAGCCCCCACTCTaGACCATGCGGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFREQPPL*TMRATR
Trigger: CCGTGTGGCCCGCATGGTGCAGAGTGGGGGCTGCTC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGCTGTCATCCGGGCTTaGTGCTTCCTGGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMAVIRA*CFLGSS
Trigger: GGAGGACCCCAGGAAGCAGCAAGCCCGGATGACAGC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCTCGCTGGTGCGGCTaGGAGACAGGCGCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGPRWCG*ETGALQ
Trigger: CTGGAGCGCGCCTGTCTCCCAGCCGCACCAGCGAGG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CCCTCACTCACTGACGCTGTAGCTTCCTCCACAGTGAGACGGTTTCGGATGGTCTTGTTTGGGGCTATTTaGGGTGGGATGGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: PSLTDAVASSTVRRFRMVLFGAI*GGMEDH
Trigger: GTGATCCTCCATCCCACCCCAAATAGCCCCAAACAA...GACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGATGGGGGCATCCAGCTaGGGCACATTTCCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMMGASS*GTFPPL
Trigger: CAAGGGCGGAAATGTGCCTCAGCTGGATGCCCCCAT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGCTTGACTGGCTCCCATaGCTCCCGCTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMLDWLP*LPLKAP
Trigger: AGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAAG...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGAGCAGCCCCCACTCTaGACCATGCGGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMEQPPL*TMRATR
Trigger: CCGTGTGGCCCGCATGGTGCAGAGTGGGGGCTGCTC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp ATCAGATCCACATATCTAACAACAAGTGGGGCGAACAGGTCCTGCAGGTGTTTGGTCATCCGGGCTTGCTaGTTCCTGGGGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: IRSTYLTTSGANRSCRCLVIRAC*FLGSSS
Trigger: TGAGGAGGACCCCAGGAAGCAGCAAGCCCGGATGAC...CAAACACCTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGTGGATCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGCTGTCATCCGGGCTTaGTGCTTCCTGGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENAVIRA*CFLGSS
Trigger: GGAGGACCCCAGGAAGCAGCAAGCCCGGATGACAGC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp CTAGTAATAGCTGGACCAAGACCCATGAGGCAGCAGTTGTGGAAACTGAACATTGCTGTCATCCGGGCTTaGTGCTTCCTGGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LVIAGPRPMRQQLWKLNIAVIRA*CFLGSS
Trigger: GGAGGACCCCAGGAAGCAGCAAGCCCGGATGACAGC...AATGTTCAGTTTCCACAACTGCTGCCTCATGGGTCTTGGTCCAGCTATTACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGCCGAGAGTCATTGGCTaGGCAGCCCCCACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRPRVIG*AAPTLH
Trigger: GTGCAGAGTGGGGGCTGCTCAGCCAATGACTCTCGG...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CATTACCACTGGTACACAATTTGCATTGTCACACAGACAAAATCGAGAGGGGAGCCGAGAGTCATTGGCTaGGCAGCCCCCACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: HYHWYTICIVTQTKSRGEPRVIG*AAPTLH
Trigger: GTGCAGAGTGGGGGCTGCTCAGCCAATGACTCTCGG...CTCCCCTCTCGATTTTGTCTGTGTGACAATGCAAATTGTGTACCAGTGGTAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGACACCTGGCCAGGACTaGACCAGCCCAGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMTPGQD*TSPGKN
Trigger: ATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCTTGACTGGCTCCCATaGCTCCCGCTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENLDWLP*LPLKAP
Trigger: AGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAAG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGAGCCCAGCACATCCTTaGCCCTCTCCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMSPAHP*PSPLPG
Trigger: TCCTGGAAGAGGAGAGGGGCAAGGATGTGCTGGGCT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGCCCCACTCTGCACCATaGGGGCCACACGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRPHSAP*GPHGHS
Trigger: AGAGTGACCGTGTGGCCCGCATGGTGCAGAGTGGGG...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGCTGTCATCCGGGCTTaGTGCTTCCTGGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFAVIRA*CFLGSS
Trigger: GGAGGACCCCAGGAAGCAGCAAGCCCGGATGACAGC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGGGCTTGCTGCTTCCTaGGGTCCTCCTCACCACGGT +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFGLAAS*GPPHHG
Trigger: ACCGTGGTGAGGAGGACCCCAGGAAGCAGCAAGCCC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGGCTGCCTGCTCATCTaGATTGTCCAGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMGCLLI*IVQLTG
Trigger: GCCTGTCAGCTGGACAATCCAGATGAGCAGGCAGCC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGACAGCTGGCAGCGCATaGGTTGTGGAGAAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMTAGSA*VVEKSP
Trigger: AGGCGACTTCTCCACAACCCATGCGCTGCCAGCTGT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGCTATTTGGGGTGGGATaGAGGATCACCCGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMLFGVG*RITRPS
Trigger: ACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAG...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGCCACCCTCCAAACCTaGCTGAGGGTCGGTGTAATC +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMATLQT*LRVGVI
Trigger: GATTACACCGACCCTCAGCCAGGTTTGGAGGGTGGC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCGAGAGTCATTGGCTaGGCAGCCCCCACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGPRVIG*AAPTLH
Trigger: GTGCAGAGTGGGGGCTGCTCAGCCAATGACTCTCGG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGGCCTTGGACTTCCATaGTCACCACCTCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMGLGLP*SPPPRR
Trigger: TCTCCTTGGAGGTGGTGATCATGGAAGTCCAAGGCC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CTTGCCATCAGTTTTAGCCGCTGCTCTAAGTGTTTTCCAAACTCTTCCTCAGGCGGCCTTGGACTTCCATaGTCACCACCTCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LAISFSRCSKCFPNSSSGGLGLP*SPPPRR
Trigger: TCTCCTTGGAGGTGGTGATCATGGAAGTCCAAGGCC...GCCTGAGGAAGAGTTTGGAAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGTGGAGAAGTCGCCTTaGGTGCCCCAGGTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMVEKSP*VPQVGL
Trigger: TAAACCAACCTGGGGCACTCAAGGCGACTTCTCCAC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTATGGGGGCATCCAGCTaGGGCACATTTCCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFMGASS*GTFPPL
Trigger: CAAGGGCGGAAATGTGCCTCAGCTGGATGCCCCCAT...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGATGGGGGCATCCAGCTaGGGCACATTTCCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRMGASS*GTFPPL
Trigger: CAAGGGCGGAAATGTGCCTCAGCTGGATGCCCCCAT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATACACCTGGCCAGGACTaGACCAGCCCAGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENTPGQD*TSPGKN
Trigger: ATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGTCCACTGCAAAGAGTaGCAGGAACGTCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMVHCKE*QERLRM
Trigger: CATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGAC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATAGCCCAGCACATCCTTaGCCCTCTCCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENSPAHP*PSPLPG
Trigger: TCCTGGAAGAGGAGAGGGGCAAGGATGTGCTGGGCT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTCATCCCGGCGCTGCCTaGCGAGCCCTCGCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTHPGAA*RALAGA
Trigger: CGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGATG...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGCATCCCGGCGCTGCCTaGCGAGCCCTCGCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRHPGAA*RALAGA
Trigger: CGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGATG...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGTCATCCGGGCTTGCTaGTTCCTGGGGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRVIRAC*FLGSSS
Trigger: TGAGGAGGACCCCAGGAAGCAGCAAGCCCGGATGAC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGTCATCCGGGCTTGCTaGTTCCTGGGGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFVIRAC*FLGSSS
Trigger: TGAGGAGGACCCCAGGAAGCAGCAAGCCCGGATGAC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGAAGGCCTCGGCGTGGTaGTCCTCGTTTTGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMKASAW*SSFCCS
Trigger: ACTGCAACAAAACGAGGAGCACCACGCCGAGGCCTT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067491.14
CDS-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCACGTGTCTGGGGGTTaGACCTCTAAGGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENHVSGG*TSKAAS
Trigger: GGATGCAGCCTTAGAGGTGCAACCCCCAGACACGTG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAGGGCTTGCTGCTTCCTaGGGTCCTCCTCACCACGGT +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGGLAAS*GPPHHG
Trigger: ACCGTGGTGAGGAGGACCCCAGGAAGCAGCAAGCCC...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGGGCTTGCTGCTTCCTaGGGTCCTCCTCACCACGGT +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMGLAAS*GPPHHG
Trigger: ACCGTGGTGAGGAGGACCCCAGGAAGCAGCAAGCCC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGTCTAACTCAGAAGCTGCACTaGCTGTCATCCGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ALITGLHPNGLLDPENGLTQKLH*LSSGLA
Trigger: AGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGT...TAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGCAGCGCATGGGTTGTaGAGAAGTCGCCTTGAGTGC +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENAAHGL*RSRLEC
Trigger: GCACTCAAGGCGACTTCTCCACAACCCATGCGCTGC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCTATTTGGGGTGGGATaGAGGATCACCCGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENLFGVG*RITRPS
Trigger: ACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGCCACCCTCCAAACCTaGCTGAGGGTCGGTGTAATC +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENATLQT*LRVGVI
Trigger: GATTACACCGACCCTCAGCCAGGTTTGGAGGGTGGC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GGCCACGTCCATCCCGGGTTTAGGCACGTCCACATACTTGGAAGCTGCCTTCACTTTGACCTCTTCTTGTaGTACTGGAGTGACAATATC +
Preference number: 4 (lower is better)
Translates to: GHVHPGFRHVHILGSCLHFDLFL*YWSDNI
Trigger: GATATTGTCACTCCAGTACCACAAGAAGAGGTCAAA...GTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGCAGCAGCTGGAAGAGTaGGAAACTGTCCCACGTGTC +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMQQLEE*ETVPRV
Trigger: GACACGTGGGACAGTTTCCCACTCTTCCAGCTGCTG...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTTCCAGGATCTCATCTaGCTCCTCTTCGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMFQDLI*LLFAGR
Trigger: TCGTCCAGCGAAGAGGAGTCAGATGAGATCCTGGAA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp GCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGTCTATTCCAGGATCTCATCTaGCTCCTCTTCGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: ALITGLHPNGLLDPENGLFQDLI*LLFAGR
Trigger: TCGTCCAGCGAAGAGGAGTCAGATGAGATCCTGGAA...TAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTTTGGGTCTCCCCATTaGGAAAAGCCTGGAACCGGT +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMFGSPH*EKPGTG
Trigger: ACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGCACTGTCTCCTTGCTaGGGCCGTCAATCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENALSPC*GRQSQV
Trigger: TACCTGAGATTGACGGCCTCAGCAAGGAGACAGTGC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp GGCCACGTCCATCCCGGGTTTAGGCACGTCCACATACTTGGAAGCTGCCTTCACGCATTATACAGGAGTTaGTGTTCAAACTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: GHVHPGFRHVHILGSCLHALYRS*CSNFLI
Trigger: GATCAAGAAGTTTGAACATCAACTCCTGTATAATGC...GTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGCCTTGGACTTCCATaGTCACCACCTCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENGLGLP*SPPPRR
Trigger: TCTCCTTGGAGGTGGTGATCATGGAAGTCCAAGGCC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CTAGTAATAGCTGGACCAAGACCCATGAGGCAGCAGTTGTGGAAACTGAACATTGTGGAGAAGTCGCCTTaGGTGCCCCAGGTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: LVIAGPRPMRQQLWKLNIVEKSP*VPQVGL
Trigger: TAAACCAACCTGGGGCACTCAAGGCGACTTCTCCAC...AATGTTCAGTTTCCACAACTGCTGCCTCATGGGTCTTGGTCCAGCTATTACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAATGGGGGCATCCAGCTaGGGCACATTTCCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGMGASS*GTFPPL
Trigger: CAAGGGCGGAAATGTGCCTCAGCTGGATGCCCCCAT...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGTCCACTGCAAAGAGTaGCAGGAACGTCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENVHCKE*QERLRM
Trigger: CATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGAC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACTTGACTGGCTCCCATaGCTCCCGCTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGLDWLP*LPLKAP
Trigger: AGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAAG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGCTTGACTGGCTCCCATaGCTCCCGCTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMLDWLP*LPLKAP
Trigger: AGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAAG...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTCACGAAGGACATCCTaGGAATGGCGGACGAAAGTC +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMSRRTS*EWRTKV
Trigger: GACTTTCGTCCGCCATTCTCAGGATGTCCTTCGTGA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTTGCTGATCTTCTGCTaGCGCCGAGCCATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRLLIFC*RRAMSV
Trigger: CACCGACATGGCTCGGCGGCAGCAGAAGATCAGCAA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTTGCTGATCTTCTGCTaGCGCCGAGCCATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFLLIFC*RRAMSV
Trigger: CACCGACATGGCTCGGCGGCAGCAGAAGATCAGCAA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTCGTCTGATCTGGGCTaGCTGCTCATCTGGATTGTC +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMSSDLG*LLIWIV
Trigger: GACAATCCAGATGAGCAGGCAGCCCAGATCAGACGA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTTGGCGTTGAGCTTCTaGACCTGGGTAGGGGGAACA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENLALSF*TWVGGT
Trigger: TGTTCCCCCTACCCAGGTGCAGAAGCTCAACGCCAA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTCCTCGCTGGTGCGGCTaGGAGACAGGCGCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTPRWCG*ETGALQ
Trigger: CTGGAGCGCGCCTGTCTCCCAGCCGCACCAGCGAGG...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGCTGCCGAGCCCTCGCTaGTGCGGCTGGGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRLPSPR*CGWETG
Trigger: GCCTGTCTCCCAGCCGCACCAGCGAGGGCTCGGCAG...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGGCTGCCTGCTCATCTaGATTGTCCAGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFGCLLI*IVQLTG
Trigger: GCCTGTCAGCTGGACAATCCAGATGAGCAGGCAGCC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGCAGCGCATGGGTTGTaGAGAAGTCGCCTTGAGTGC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRAAHGL*RSRLEC
Trigger: GCACTCAAGGCGACTTCTCCACAACCCATGCGCTGC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGACAGCTGGCAGCGCATaGGTTGTGGAGAAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRTAGSA*VVEKSP
Trigger: AGGCGACTTCTCCACAACCCATGCGCTGCCAGCTGT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGCCACCCTCCAAACCTaGCTGAGGGTCGGTGTAATC +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFATLQT*LRVGVI
Trigger: GATTACACCGACCCTCAGCCAGGTTTGGAGGGTGGC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGACAGGTTTGTGCGACTaGCCAGTGGCCCTGTACATA +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMTGLCD*PVALYI
Trigger: TATGTACAGGGCCACTGGCCAGTCGCACAAACCTGT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGTCTATTGAGCTTCTGCACCTaGGTAGGGGGAACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: ALITGLHPNGLLDPENGLLSFCT*VGGTGL
Trigger: CAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAA...TAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGCTGTTACCATGGACATaGGACGCGCAGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMLLPWT*DAQKAK
Trigger: CTTTGCCTTCTGCGCGTCCCATGTCCATGGTAACAG...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGACGGTGCCGAAAAAGTaGGCATCTGTGGGATGCCTA +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMTVPKK*ASVGCL
Trigger: TAGGCATCCCACAGATGCCCACTTTTTCGGCACCGT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGCACTGTCTCCTTGCTaGGGCCGTCAATCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRALSPC*GRQSQV
Trigger: TACCTGAGATTGACGGCCTCAGCAAGGAGACAGTGC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGGACAGCAGGACATCTaGCTTAGAAAGCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMGQQDI*LRKLVL
Trigger: GAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTCC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGAGCTGTAGGAGTTCCTaGGGCTCTGCCTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMSCRSS*GSAFFS
Trigger: AGAAAAGAAGGCAGAGCCTCAGGAACTCCTACAGCT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAACACCTGGCCAGGACTaGACCAGCCCAGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGTPGQD*TSPGKN
Trigger: ATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGT...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGTCCACTGCAAAGAGTaGCAGGAACGTCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFVHCKE*QERLRM
Trigger: CATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGAC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTATAGCAGCCATCCATaGCGGTGCCGAAAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENYSSHP*RCRKSG
Trigger: CCCACTTTTTCGGCACCGTCATGGATGGCTGCTATA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGACGAACACGTACAGCTaGAGCCTCTTCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMTNTYS*SLFFLS
Trigger: AGAGAGGAAGAAGAGGCTGCAGCTGTACGTGTTCGT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATTGCTGATCTTCTGCTaGCGCCGAGCCATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGLLIFC*RRAMSV
Trigger: CACCGACATGGCTCGGCGGCAGCAGAAGATCAGCAA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTTGGCGTTGAGCTTCTaGACCTGGGTAGGGGGAACA +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRLALSF*TWVGGT
Trigger: TGTTCCCCCTACCCAGGTGCAGAAGCTCAACGCCAA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGAGGAACGTCTCCGCATaGTCCACCATTAAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMRNVSA*STIKSD
Trigger: GTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTACTCAGAAGCTGCACTaGCTGTCATCCGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFTQKLH*LSSGLA
Trigger: AGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGT...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGGCTGCCTGCTCATCTaGATTGTCCAGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMGCLLI*IVQLTG
Trigger: GCCTGTCAGCTGGACAATCCAGATGAGCAGGCAGCC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTTGAGTGCCCCAGGTTaGTTTAGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMLSAPG*FRSLCL
Trigger: CAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGTCTATTGAGTGCCCCAGGTTaGTTTAGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ALITGLHPNGLLDPENGLLSAPG*FRSLCL
Trigger: CAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAA...TAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAGCAGCGCATGGGTTGTaGAGAAGTCGCCTTGAGTGC +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGAAHGL*RSRLEC
Trigger: GCACTCAAGGCGACTTCTCCACAACCCATGCGCTGC...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAACAGCTGGCAGCGCATaGGTTGTGGAGAAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGTAGSA*VVEKSP
Trigger: AGGCGACTTCTCCACAACCCATGCGCTGCCAGCTGT...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGACAGCTGGCAGCGCATaGGTTGTGGAGAAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMTAGSA*VVEKSP
Trigger: AGGCGACTTCTCCACAACCCATGCGCTGCCAGCTGT...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACTATTTGGGGTGGGATaGAGGATCACCCGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGLFGVG*RITRPS
Trigger: ACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTTGTTTGGGGCTATTTaGGGTGGGATGGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMLFGAI*GGMEDH
Trigger: GTGATCCTCCATCCCACCCCAAATAGCCCCAAACAA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAGCCACCCTCCAAACCTaGCTGAGGGTCGGTGTAATC +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGATLQT*LRVGVI
Trigger: GATTACACCGACCCTCAGCCAGGTTTGGAGGGTGGC...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TGTCCACTGCAAAGAGTGACAGGAACGTCTCCGCATGCTCCACCATTAAGTCTGCTCGGACTCCATTTCTaGCGCAATACTCATCTAACA +
Preference number: 4 (lower is better)
Translates to: CPLQRVTGTSPHAPPLSLLGLHF*RNTHLT
Trigger: TGTTAGATGAGTATTGCGCCAGAAATGGAGTCCGAG...CAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTGTAGTGAAGAAGCGTaGGGTCAATCATCGCGCCAT +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMCSEEA*GQSSRH
Trigger: ATGGCGCGATGATTGACCCCACGCTTCTTCACTACA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGCAGCAGCTGGAAGAGTaGGAAACTGTCCCACGTGTC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRQQLEE*ETVPRV
Trigger: GACACGTGGGACAGTTTCCCACTCTTCCAGCTGCTG...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCAGCAGCTGGAAGAGTaGGAAACTGTCCCACGTGTC +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFQQLEE*ETVPRV
Trigger: GACACGTGGGACAGTTTCCCACTCTTCCAGCTGCTG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGCGCTCAAAGCCCCTGTaGATAGATTGTGCAATGGAG +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMRSKPL*IDCAME
Trigger: CTCCATTGCACAATCTATCCACAGGGGCTTTGAGCG...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
3UTR CAA 72 bp GCTTTGAAATTGGCGTCTCAGCCACTTTTGCAGAGGTaGTGTCAAAAAGTGGCTGAGCCAATCACGGACAAG +
Preference number: 4 (lower is better)
Translates to: ALKLASQPLLQR*CQKVAEPITDK
Trigger: CTTGTCCGTGATTGGCTCAGCCACTTTTTGACACAACCTCTGCAAAAGTGGCTGAGACGCCAATTTCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTTCCAGGATCTCATCTaGCTCCTCTTCGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRFQDLI*LLFAGR
Trigger: TCGTCCAGCGAAGAGGAGTCAGATGAGATCCTGGAA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTTCCAGGATCTCATCTaGCTCCTCTTCGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFFQDLI*LLFAGR
Trigger: TCGTCCAGCGAAGAGGAGTCAGATGAGATCCTGGAA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTTTGGGTCTCCCCATTaGGAAAAGCCTGGAACCGGT +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFFGSPH*EKPGTG
Trigger: ACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTTTGGGTCTCCCCATTaGGAAAAGCCTGGAACCGGT +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRFGSPH*EKPGTG
Trigger: ACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CATTACCACTGGTACACAATTTGCATTGTCACACAGACAAAATCGAGAGGGGAGTTTGGGTCTCCCCATTaGGAAAAGCCTGGAACCGGT +
Preference number: 4 (lower is better)
Translates to: HYHWYTICIVTQTKSRGEFGSPH*EKPGTG
Trigger: ACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAA...CTCCCCTCTCGATTTTGTCTGTGTGACAATGCAAATTGTGTACCAGTGGTAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCCACACGGTCACTCTTaGGAAACACCTCATAGTAGC +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENPHGHS*ETPHSS
Trigger: GCTACTATGAGGTGTTTCTCAAGAGTGACCGTGTGG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGCACTGTCTCCTTGCTaGGGCCGTCAATCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMALSPC*GRQSQV
Trigger: TACCTGAGATTGACGGCCTCAGCAAGGAGACAGTGC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTCAGTTTCTGTAGCTTaGACTCTCCACCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMSVSVA*TLHPWT
Trigger: TGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCCTCACCCATGTCAATaGTGGAAGCATTGTGACTGC +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENPHPCQ*WKHCDC
Trigger: GCAGTCACAATGCTTCCATCATTGACATGGGTGAGG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGACAGCAGGACATCTaGCTTAGAAAGCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENGQQDI*LRKLVL
Trigger: GAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTCC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAGTGGAGAAGTCGCCTTaGGTGCCCCAGGTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGVEKSP*VPQVGL
Trigger: TAAACCAACCTGGGGCACTCAAGGCGACTTCTCCAC...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATAGCTGTAGGAGTTCCTaGGGCTCTGCCTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENSCRSS*GSAFFS
Trigger: AGAAAAGAAGGCAGAGCCTCAGGAACTCCTACAGCT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTATAGCAGCCATCCATaGCGGTGCCGAAAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFYSSHP*RCRKSG
Trigger: CCCACTTTTTCGGCACCGTCATGGATGGCTGCTATA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTCACGAAGGACATCCTaGGAATGGCGGACGAAAGTC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRSRRTS*EWRTKV
Trigger: GACTTTCGTCCGCCATTCTCAGGATGTCCTTCGTGA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTCAGCCACGTGCAGATaGTGTTCATGGAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENSATCR*CSWSCC
Trigger: ACAACAGCTCCATGAACATCATCTGCACGTGGCTGA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATACGAACACGTACAGCTaGAGCCTCTTCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENTNTYS*SLFFLS
Trigger: AGAGAGGAAGAAGAGGCTGCAGCTGTACGTGTTCGT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTCGTCTGATCTGGGCTaGCTGCTCATCTGGATTGTC +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFSSDLG*LLIWIV
Trigger: GACAATCCAGATGAGCAGGCAGCCCAGATCAGACGA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGCCTGGCTATTTGATCTaGCATTTGGAGACGTCCATC +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMPGYLI*HLETSI
Trigger: GATGGACGTCTCCAAATGGCAGATCAAATAGCCAGG...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGTCTCCTTCTTTGACTaGATTGAAGAAGGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENVSFFD*IEEGSA
Trigger: GGCCGAGCCTTCTTCAATGCAGTCAAAGAAGGAGAC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp CTAGTAATAGCTGGACCAAGACCCATGAGGCAGCAGTTGTGGAAACTGAACATTGTCTCCTTCTTTGACTaGATTGAAGAAGGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LVIAGPRPMRQQLWKLNIVSFFD*IEEGSA
Trigger: GGCCGAGCCTTCTTCAATGCAGTCAAAGAAGGAGAC...AATGTTCAGTTTCCACAACTGCTGCCTCATGGGTCTTGGTCCAGCTATTACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTCCAAAGTCAGCCGCTaGACCATCTCAAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENSKVSR*TISKRE
Trigger: TTCCCTCTTTGAGATGGTGCAGCGGCTGACTTTGGA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCATCGCGCCATTTTCTaGTCGTTCCAGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENHRAIF*SFQQVS
Trigger: AGAGACTTGCTGGAACGAGCAGAAAATGGCGCGATG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTTGACTAGAGCAGCCTaGTCTAGGCATTTACGGATG +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMLTRAA*SRHLRM
Trigger: CATCCGTAAATGCCTAGAGCAGGCTGCTCTAGTCAA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGCCTGTGGATAGATTGTaGAATGGAGGACTCCATCAG +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMPVDRL*NGGLHQ
Trigger: CTGATGGAGTCCTCCATTGCACAATCTATCCACAGG...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCCTCACCACGGTAGATaGCATCAAACTTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFPHHGR*HQTWPS
Trigger: GGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGCCTCACCACGGTAGATaGCATCAAACTTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRPHHGR*HQTWPS
Trigger: GGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGG...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAACTCAGAAGCTGCACTaGCTGTCATCCGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGTQKLH*LSSGLA
Trigger: AGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGT...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AAAATATCTGAGGGCAACACAAACTCTCAGAAGGATCCTGGTTACTACATAACGGCAGCGCATGGGTTGTaGAGAAGTCGCCTTGAGTGC +
Preference number: 4 (lower is better)
Translates to: KISEGNTNSQKDPGYYITAAHGL*RSRLEC
Trigger: GCACTCAAGGCGACTTCTCCACAACCCATGCGCTGC...CGTTATGTAGTAACCAGGATCCTTCTGAGAGTTTGTGTTGCCCTCAGATATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AAAATATCTGAGGGCAACACAAACTCTCAGAAGGATCCTGGTTACTACATAACGCTATTTGGGGTGGGATaGAGGATCACCCGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: KISEGNTNSQKDPGYYITLFGVG*RITRPS
Trigger: ACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAG...CGTTATGTAGTAACCAGGATCCTTCTGAGAGTTTGTGTTGCCCTCAGATATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTTGTTTGGGGCTATTTaGGGTGGGATGGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENLFGAI*GGMEDH
Trigger: GTGATCCTCCATCCCACCCCAAATAGCCCCAAACAA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGCCACTCAGATTGTTTaGGGCTATTTGGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENATQIV*GYLGWD
Trigger: ATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTTGAGCTTCTGCACCTaGGTAGGGGGAACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRLSFCT*VGGTGL
Trigger: CAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTTGAGCTTCTGCACCTaGGTAGGGGGAACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFLSFCT*VGGTGL
Trigger: CAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCGTAAAATTGTGAGATaGGGGCATCCAGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENRKIVR*GHPAEA
Trigger: TGCCTCAGCTGGATGCCCCCATCTCACAATTTTACG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000067491.14
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCTGTTACCATGGACATaGGACGCGCAGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFLLPWT*DAQKAK
Trigger: CTTTGCCTTCTGCGCGTCCCATGTCCATGGTAACAG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CATTACCACTGGTACACAATTTGCATTGTCACACAGACAAAATCGAGAGGGGAGCTGTTACCATGGACATaGGACGCGCAGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: HYHWYTICIVTQTKSRGELLPWT*DAQKAK
Trigger: CTTTGCCTTCTGCGCGTCCCATGTCCATGGTAACAG...CTCCCCTCTCGATTTTGTCTGTGTGACAATGCAAATTGTGTACCAGTGGTAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGAAGTCATTCAGCAGCTaGAAGAGTGGGAAACTGTCC +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMKSFSS*KSGKLS
Trigger: GGACAGTTTCCCACTCTTCCAGCTGCTGAATGACTT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCAGAAAATTGTGAGATaGGGGCATCCAGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENQKIVR*GHPAEA
Trigger: TGCCTCAGCTGGATGCCCCCATCTCACAATTTTCTG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112658.8
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTTCCAGGATCTCATCTaGCTCCTCTTCGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMFQDLI*LLFAGR
Trigger: TCGTCCAGCGAAGAGGAGTCAGATGAGATCCTGGAA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCCACACGGTCACTCTTaGGAAACACCTCATAGTAGC +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFPHGHS*ETPHSS
Trigger: GCTACTATGAGGTGTTTCTCAAGAGTGACCGTGTGG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTCCGAGAGTCATTGGCTaGGCAGCCCCCACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTPRVIG*AAPTLH
Trigger: GTGCAGAGTGGGGGCTGCTCAGCCAATGACTCTCGG...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGCCGAGAGTCATTGGCTaGGCAGCCCCCACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRPRVIG*AAPTLH
Trigger: GTGCAGAGTGGGGGCTGCTCAGCCAATGACTCTCGG...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTCAGTTTCTGTAGCTTaGACTCTCCACCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENSVSVA*TLHPWT
Trigger: TGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGCCTCACCCATGTCAATaGTGGAAGCATTGTGACTGC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRPHPCQ*WKHCDC
Trigger: GCAGTCACAATGCTTCCATCATTGACATGGGTGAGG...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGGACAGCAGGACATCTaGCTTAGAAAGCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFGQQDI*LRKLVL
Trigger: GAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTCC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTAGCTGTAGGAGTTCCTaGGGCTCTGCCTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFSCRSS*GSAFFS
Trigger: AGAAAAGAAGGCAGAGCCTCAGGAACTCCTACAGCT...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTCACGAAGGACATCCTaGGAATGGCGGACGAAAGTC +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMSRRTS*EWRTKV
Trigger: GACTTTCGTCCGCCATTCTCAGGATGTCCTTCGTGA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTCAGCCACGTGCAGATaGTGTTCATGGAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFSATCR*CSWSCC
Trigger: ACAACAGCTCCATGAACATCATCTGCACGTGGCTGA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTCAGCCACGTGCAGATaGTGTTCATGGAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRSATCR*CSWSCC
Trigger: ACAACAGCTCCATGAACATCATCTGCACGTGGCTGA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACAGTCCAGAAAATTGTaGGATGGGGGCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGQSRKL*DGGIQL
Trigger: CAGCTGGATGCCCCCATCTCACAATTTTCTGGACTG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112658.8
CDS-3UTR GCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTACGAACACGTACAGCTaGAGCCTCTTCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFTNTYS*SLFFLS
Trigger: AGAGAGGAAGAAGAGGCTGCAGCTGTACGTGTTCGT...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTTGACAGTCTGTAGCTaGTGTTTGCTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMLTVCS*CLLIFC
Trigger: GCAGAAGATCAGCAAACAGCAGCTACAGACTGTCAA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTCCCCACTCTGCACCATaGGGGCCACACGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTPHSAP*GPHGHS
Trigger: AGAGTGACCGTGTGGCCCGCATGGTGCAGAGTGGGG...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGCCCCACTCTGCACCATaGGGGCCACACGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRPHSAP*GPHGHS
Trigger: AGAGTGACCGTGTGGCCCGCATGGTGCAGAGTGGGG...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGTCTCCTTCTTTGACTaGATTGAAGAAGGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFVSFFD*IEEGSA
Trigger: GGCCGAGCCTTCTTCAATGCAGTCAAAGAAGGAGAC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTCCAAAGTCAGCCGCTaGACCATCTCAAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRSKVSR*TISKRE
Trigger: TTCCCTCTTTGAGATGGTGCAGCGGCTGACTTTGGA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTCCAAAGTCAGCCGCTaGACCATCTCAAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFSKVSR*TISKRE
Trigger: TTCCCTCTTTGAGATGGTGCAGCGGCTGACTTTGGA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCATCGCGCCATTTTCTaGTCGTTCCAGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFHRAIF*SFQQVS
Trigger: AGAGACTTGCTGGAACGAGCAGAAAATGGCGCGATG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGAGGAACGTCTCCGCATaGTCCACCATTAAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRRNVSA*STIKSD
Trigger: GTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCCTGTGGATAGATTGTaGAATGGAGGACTCCATCAG +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENPVDRL*NGGLHQ
Trigger: CTGATGGAGTCCTCCATTGCACAATCTATCCACAGG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCTCACCACGGTAGATaGCATCAAACTTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGPHHGR*HQTWPS
Trigger: GGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTGGGCTTGCTGCTTCCTaGGGTCCTCCTCACCACGGT +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTGLAAS*GPPHHG
Trigger: ACCGTGGTGAGGAGGACCCCAGGAAGCAGCAAGCCC...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGGGGCTTGCTGCTTCCTaGGGTCCTCCTCACCACGGT +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRGLAAS*GPPHHG
Trigger: ACCGTGGTGAGGAGGACCCCAGGAAGCAGCAAGCCC...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTTGAGTGCCCCAGGTTaGTTTAGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRLSAPG*FRSLCL
Trigger: CAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTTGTTTGGGGCTATTTaGGGTGGGATGGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRLFGAI*GGMEDH
Trigger: GTGATCCTCCATCCCACCCCAAATAGCCCCAAACAA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGTCTAGCCCTGTACATAGCTTaGACCCACAAAATTCGATCT +
Preference number: 4 (lower is better)
Translates to: ALITGLHPNGLLDPENGLALYIA*THKIRS
Trigger: AGATCGAATTTTGTGGGTCCAAGCTATGTACAGGGC...TAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGACAGGTTTGTGCGACTaGCCAGTGGCCCTGTACATA +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMTGLCD*PVALYI
Trigger: TATGTACAGGGCCACTGGCCAGTCGCACAAACCTGT...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTAGTAATAGCTGGACCAAGACCCATGAGGCAGCAGTTGTGGAAACTGAACATTTCAAAGAGGGAAGCGTaGTCAAAGTTACAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LVIAGPRPMRQQLWKLNISKREA*SKLQGL
Trigger: CAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGA...AATGTTCAGTTTCCACAACTGCTGCCTCATGGGTCTTGGTCCAGCTATTACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGCTCGGACTCCATTTCTaGCGCAATACTCATCTAACA +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMLGLHF*RNTHLT
Trigger: TGTTAGATGAGTATTGCGCCAGAAATGGAGTCCGAG...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTGTAGTGAAGAAGCGTaGGGTCAATCATCGCGCCAT +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRCSEEA*GQSSRH
Trigger: ATGGCGCGATGATTGACCCCACGCTTCTTCACTACA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGCTGTTACCATGGACATaGGACGCGCAGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMLLPWT*DAQKAK
Trigger: CTTTGCCTTCTGCGCGTCCCATGTCCATGGTAACAG...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTGGGTAGGTTCACATTaGGTAGGTTCACATTGGGTA +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMWVGSH*VGSHWV
Trigger: TACCCAATGTGAACCTACCCAATGTGAACCTACCCA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAACGGTGCCGAAAAAGTaGGCATCTGTGGGATGCCTA +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGTVPKK*ASVGCL
Trigger: TAGGCATCCCACAGATGCCCACTTTTTCGGCACCGT...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGACGGTGCCGAAAAAGTaGGCATCTGTGGGATGCCTA +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMTVPKK*ASVGCL
Trigger: TAGGCATCCCACAGATGCCCACTTTTTCGGCACCGT...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTCCCCTCGTCATATCTaGATAACTTTGCCAGTACGC +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENSPRHI*ITLPVR
Trigger: GCGTACTGGCAAAGTTATCCAGATATGACGAGGGGA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTCTTGCTGTTTAAGGTaGAATCCAGGACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENSCCLR*NPGPLA
Trigger: TGCAAGGGGTCCTGGATTCCACCTTAAACAGCAAGA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
3UTR CAA 72 bp ACTAGTTCAGCAAGACGGATTGTGTCTTCGAGCTTTTaGGCGGGAGTGATTAAGCGGCCTACATTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TSSARRIVSSSF*AGVIKRPTFSA
Trigger: TGCAGAAAATGTAGGCCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CAA 72 bp GGTACTTTGGGTAGGTTCACATTGGGTAGGTTCACATaGGGTAGGTTACTGGTTAAACTCTTGACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GTLGRFTLGRFT*GRLLVKLLTGS
Trigger: GGAGCCAGTCAAGAGTTTAACCAGTAACCTACCCAATGTGAACCTACCCAATGTGAACCTACCCAAAGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGCCACACGGTCACTCTTaGGAAACACCTCATAGTAGC +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMPHGHS*ETPHSS
Trigger: GCTACTATGAGGTGTTTCTCAAGAGTGACCGTGTGG...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTCAGTTTCTGTAGCTTaGACTCTCCACCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFSVSVA*TLHPWT
Trigger: TGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTCAGTTTCTGTAGCTTaGACTCTCCACCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRSVSVA*TLHPWT
Trigger: TGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGCCTCACCCATGTCAATaGTGGAAGCATTGTGACTGC +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMPHPCQ*WKHCDC
Trigger: GCAGTCACAATGCTTCCATCATTGACATGGGTGAGG...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAAGCTGTAGGAGTTCCTaGGGCTCTGCCTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGSCRSS*GSAFFS
Trigger: AGAAAAGAAGGCAGAGCCTCAGGAACTCCTACAGCT...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGATCTGCGTAAAATTGTaGGATGGGGGCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMICVKL*DGGIQL
Trigger: CAGCTGGATGCCCCCATCTCACAATTTTACGCAGAT...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000067491.14
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGAATCATTAAGTCTGTaGTCCAAAGTCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRESLSL*SKVSRC
Trigger: GCAGCGGCTGACTTTGGATCACAGACTTAATGATTC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTAACCCGTTCCAAGAGTaGGAGAGTAGCTTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFNPFQE*ESSFQS
Trigger: GCTTTGAAAGCTACTCTCTCACTCTTGGAACGGGTT...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGAACCCGTTCCAAGAGTaGGAGAGTAGCTTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRNPFQE*ESSFQS
Trigger: GCTTTGAAAGCTACTCTCTCACTCTTGGAACGGGTT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGCTTTTTGGCGGGAGTaGTTAAGCGGCCTACATTTT +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFAFWRE*LSGLHF
Trigger: AAAATGTAGGCCGCTTAATCACTCCCGCCAAAAAGC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGTTGCAGTACTTCGATaGCTAGTTCAGCAAGACGGA +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRVAVLR*LVQQDG
Trigger: TCCGTCTTGCTGAACTAGTCATCGAAGTACTGCAAC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTCCTGCAGGTGTTTGTaGAACTTTCCATTGCACAAA +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMSCRCL*NFPLHK
Trigger: TTTGTGCAATGGAAAGTTTCACAAACACCTGCAGGA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATACTGGTTAAACTCTTaGCTGGCTCCCATGACTCCC +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGYWLNS*LAPMTP
Trigger: GGGAGTCATGGGAGCCAGTCAAGAGTTTAACCAGTA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTACTGGTTAAACTCTTaGCTGGCTCCCATGACTCCC +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMYWLNS*LAPMTP
Trigger: GGGAGTCATGGGAGCCAGTCAAGAGTTTAACCAGTA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTGCCTTCACCGTGAATaGCAGAAACGAAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMCLHRE*QKRRKQ
Trigger: TTGTTTTCTTCGTTTCTGTCATTCACGGTGAAGGCA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATAAGCTGCCTTCACCGTaGATGACAGAAACGAAGAAA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENKLPSP*MTETKK
Trigger: TTTCTTCGTTTCTGTCATTCACGGTGAAGGCAGCTT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTCAGCCACGTGCAGATaGTGTTCATGGAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMSATCR*CSWSCC
Trigger: ACAACAGCTCCATGAACATCATCTGCACGTGGCTGA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAACGAACACGTACAGCTaGAGCCTCTTCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGTNTYS*SLFFLS
Trigger: AGAGAGGAAGAAGAGGCTGCAGCTGTACGTGTTCGT...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGACGAACACGTACAGCTaGAGCCTCTTCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMTNTYS*SLFFLS
Trigger: AGAGAGGAAGAAGAGGCTGCAGCTGTACGTGTTCGT...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTTGACAGTCTGTAGCTaGTGTTTGCTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENLTVCS*CLLIFC
Trigger: GCAGAAGATCAGCAAACAGCAGCTACAGACTGTCAA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTGTCATCCGGGCTTGCTaGTTCCTGGGGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTVIRAC*FLGSSS
Trigger: TGAGGAGGACCCCAGGAAGCAGCAAGCCCGGATGAC...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGGTCATCCGGGCTTGCTaGTTCCTGGGGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRVIRAC*FLGSSS
Trigger: TGAGGAGGACCCCAGGAAGCAGCAAGCCCGGATGAC...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp CTTGCCATCAGTTTTAGCCGCTGCTCTAAGTGTTTTCCAAACTCTTCCTCAGGCCATAGAGCTGTTCCTTaGTCAGAATCAACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LAISFSRCSKCFPNSSSGHRAVP*SESTQK
Trigger: CTTCTGAGTTGATTCTGAGCAAGGAACAGCTCTATG...GCCTGAGGAAGAGTTTGGAAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGTCTCCTTCTTTGACTaGATTGAAGAAGGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMVSFFD*IEEGSA
Trigger: GGCCGAGCCTTCTTCAATGCAGTCAAAGAAGGAGAC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAGTCTCCTTCTTTGACTaGATTGAAGAAGGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGVSFFD*IEEGSA
Trigger: GGCCGAGCCTTCTTCAATGCAGTCAAAGAAGGAGAC...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATCCAAAGTCAGCCGCTaGACCATCTCAAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGSKVSR*TISKRE
Trigger: TTCCCTCTTTGAGATGGTGCAGCGGCTGACTTTGGA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACATCGCGCCATTTTCTaGTCGTTCCAGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGHRAIF*SFQQVS
Trigger: AGAGACTTGCTGGAACGAGCAGAAAATGGCGCGATG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAAGGAACGTCTCCGCATaGTCCACCATTAAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGRNVSA*STIKSD
Trigger: GTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCT...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTGGTCTCATAGGTCTTaGTGTTTAAGGTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMWSHRS*CLRWNP
Trigger: TGGATTCCACCTTAAACAGCAAGACCTATGAGACCA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCTTCTGAGCTCTATCTaGGTCCTTCAGTCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENLLSSI*VLQSRK
Trigger: TTTTCTGGACTGAAGGACGCAGATAGAGCTCAGAAG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112658.8
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATAGATGGCATCAAACTTaGCCATCCAAGAGCTTAGCA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENRWHQT*PSKSLA
Trigger: TGCTAAGCTCTTGGATGGCCAAGTTTGATGCCATCT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATTGAGTGCCCCAGGTTaGTTTAGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGLSAPG*FRSLCL
Trigger: CAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATTGTTTGGGGCTATTTaGGGTGGGATGGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGLFGAI*GGMEDH
Trigger: GTGATCCTCCATCCCACCCCAAATAGCCCCAAACAA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGCCACTCAGATTGTTTaGGGCTATTTGGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMATQIV*GYLGWD
Trigger: ATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAGCCACTCAGATTGTTTaGGGCTATTTGGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGATQIV*GYLGWD
Trigger: ATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGC...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTCAAAGAGGGAAGCGTaGTCAAAGTTACAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRSKREA*SKLQGL
Trigger: CAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTCAAAGAGGGAAGCGTaGTCAAAGTTACAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFSKREA*SKLQGL
Trigger: CAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTGTAGTGAAGAAGCGTaGGGTCAATCATCGCGCCAT +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMCSEEA*GQSSRH
Trigger: ATGGCGCGATGATTGACCCCACGCTTCTTCACTACA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGATATCTAACAACAAGTaGGGCGAACAGGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRISNNK*GEQVLQ
Trigger: CTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATAT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGCGCTCAAAGCCCCTGTaGATAGATTGTGCAATGGAG +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMRSKPL*IDCAME
Trigger: CTCCATTGCACAATCTATCCACAGGGGCTTTGAGCG...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTGGGTAGGTTCACATTaGGTAGGTTACTGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMWVGSH*VGYWLN
Trigger: GTTTAACCAGTAACCTACCCAATGTGAACCTACCCA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTGGGTAGGTTCACATTaGGTAGGTTCACATTGGGTA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENWVGSH*VGSHWV
Trigger: TACCCAATGTGAACCTACCCAATGTGAACCTACCCA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTCCCCTCGTCATATCTaGATAACTTTGCCAGTACGC +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFSPRHI*ITLPVR
Trigger: GCGTACTGGCAAAGTTATCCAGATATGACGAGGGGA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACACAAAATTGTGAGATaGGGGCATCCAGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGHKIVR*GHPAEA
Trigger: TGCCTCAGCTGGATGCCCCCATCTCACAATTTTGTG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112657.9
CDS-3UTR TCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATCAGTTTCTGTAGCTTaGACTCTCCACCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGSVSVA*TLHPWT
Trigger: TGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AAAATATCTGAGGGCAACACAAACTCTCAGAAGGATCCTGGTTACTACATAACGATCTGCGTAAAATTGTaGGATGGGGGCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KISEGNTNSQKDPGYYITICVKL*DGGIQL
Trigger: CAGCTGGATGCCCCCATCTCACAATTTTACGCAGAT...CGTTATGTAGTAACCAGGATCCTTCTGAGAGTTTGTGTTGCCCTCAGATATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGAATCATTAAGTCTGTaGTCCAAAGTCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMESLSL*SKVSRC
Trigger: GCAGCGGCTGACTTTGGATCACAGACTTAATGATTC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGACACCTGGCCAGGACTaGACCAGCCCAGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRTPGQD*TSPGKN
Trigger: ATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGT...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGAACCCGTTCCAAGAGTaGGAGAGTAGCTTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMNPFQE*ESSFQS
Trigger: GCTTTGAAAGCTACTCTCTCACTCTTGGAACGGGTT...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGCTTTTTGGCGGGAGTaGTTAAGCGGCCTACATTTT +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMAFWRE*LSGLHF
Trigger: AAAATGTAGGCCGCTTAATCACTCCCGCCAAAAAGC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGTTGCAGTACTTCGATaGCTAGTTCAGCAAGACGGA +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMVAVLR*LVQQDG
Trigger: TCCGTCTTGCTGAACTAGTCATCGAAGTACTGCAAC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTCCTGCAGGTGTTTGTaGAACTTTCCATTGCACAAA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENSCRCL*NFPLHK
Trigger: TTTGTGCAATGGAAAGTTTCACAAACACCTGCAGGA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGCTGCAAAGTTTTGTTaGTTGAGCTTTGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENAAKFC*LSFGIN
Trigger: GTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTGCCTTCACCGTGAATaGCAGAAACGAAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENCLHRE*QKRRKQ
Trigger: TTGTTTTCTTCGTTTCTGTCATTCACGGTGAAGGCA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGATTTACACAAAATTGTaGGATGGGGGCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRIYTKL*DGGIQL
Trigger: CAGCTGGATGCCCCCATCTCACAATTTTGTGTAAAT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000112657.9
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTCCATGCCATGCTTCTaGGCTCTATCTGCGTCTTTT +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMSMPCF*ALSASF
Trigger: AAAAGACGCAGATAGAGCTCAGAAGCATGGCATGGA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGAGCCCAGCACATCCTTaGCCCTCTCCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRSPAHP*PSPLPG
Trigger: TCCTGGAAGAGGAGAGGGGCAAGGATGTGCTGGGCT...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTTGCTGATCTTCTGCTaGCGCCGAGCCATGTCGGTG +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTLLIFC*RRAMSV
Trigger: CACCGACATGGCTCGGCGGCAGCAGAAGATCAGCAA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTTGACAGTCTGTAGCTaGTGTTTGCTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRLTVCS*CLLIFC
Trigger: GCAGAAGATCAGCAAACAGCAGCTACAGACTGTCAA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTTGACAGTCTGTAGCTaGTGTTTGCTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFLTVCS*CLLIFC
Trigger: GCAGAAGATCAGCAAACAGCAGCTACAGACTGTCAA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp CATTACCACTGGTACACAATTTGCATTGTCACACAGACAAAATCGAGAGGGGAGTTGACAGTCTGTAGCTaGTGTTTGCTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: HYHWYTICIVTQTKSRGELTVCS*CLLIFC
Trigger: GCAGAAGATCAGCAAACAGCAGCTACAGACTGTCAA...CTCCCCTCTCGATTTTGTCTGTGTGACAATGCAAATTGTGTACCAGTGGTAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCATAGAGCTGTTCCTTaGTCAGAATCAACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENHRAVP*SESTQK
Trigger: CTTCTGAGTTGATTCTGAGCAAGGAACAGCTCTATG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGCCTGGCTATTTGATCTaGCATTTGGAGACGTCCATC +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMPGYLI*HLETSI
Trigger: GATGGACGTCTCCAAATGGCAGATCAAATAGCCAGG...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTTGACTAGAGCAGCCTaGTCTAGGCATTTACGGATG +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMLTRAA*SRHLRM
Trigger: CATCCGTAAATGCCTAGAGCAGGCTGCTCTAGTCAA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGCACGTGTCTGGGGGTTaGACCTCTAAGGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRHVSGG*TSKAAS
Trigger: GGATGCAGCCTTAGAGGTGCAACCCCCAGACACGTG...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTCACGTGTCTGGGGGTTaGACCTCTAAGGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTHVSGG*TSKAAS
Trigger: GGATGCAGCCTTAGAGGTGCAACCCCCAGACACGTG...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCTGTGGATAGATTGTaGAATGGAGGACTCCATCAG +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGPVDRL*NGGLHQ
Trigger: CTGATGGAGTCCTCCATTGCACAATCTATCCACAGG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGCTTGGCCCATTTCCATaGTGCAAAGTTTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMLGPFP*CKVLLI
Trigger: AATCAACAAAACTTTGCAGCATGGAAATGGGCCAAG...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTCATCAGCTACGATTTaGGTCTCCCCATTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENSSATI*VSPLRK
Trigger: TTTTCTCAATGGGGAGACCCAAATCGTAGCTGATGA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTAGATGGCATCAAACTTaGCCATCCAAGAGCTTAGCA +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFRWHQT*PSKSLA
Trigger: TGCTAAGCTCTTGGATGGCCAAGTTTGATGCCATCT...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CAATTCTTAAGTGTTTCTCCCTCGATGCATAACAATGAACTCATTACCACTGGTCCTCACCACGGTAGATaGCATCAAACTTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: QFLSVSPSMHNNELITTGPHHGR*HQTWPS
Trigger: GGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGG...ACCAGTGGTAATGAGTTCATTGTTATGCATCGAGGGAGAAACACTTAAGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGGGCTGCCTGCTCATCTaGATTGTCCAGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRGCLLI*IVQLTG
Trigger: GCCTGTCAGCTGGACAATCCAGATGAGCAGGCAGCC...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGACAGCTGGCAGCGCATaGGTTGTGGAGAAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRTAGSA*VVEKSP
Trigger: AGGCGACTTCTCCACAACCCATGCGCTGCCAGCTGT...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CATTACCACTGGTACACAATTTGCATTGTCACACAGACAAAATCGAGAGGGGAGTTTTACTTTAACAGCTaGCAGCGCATGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: HYHWYTICIVTQTKSRGEFYFNS*QRMGCG
Trigger: TCCACAACCCATGCGCTGCCAGCTGTTAAAGTAAAA...CTCCCCTCTCGATTTTGTCTGTGTGACAATGCAAATTGTGTACCAGTGGTAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTCTATTTGGGGTGGGATaGAGGATCACCCGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTLFGVG*RITRPS
Trigger: ACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAG...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGACACATTCTTACCAATaGTCCATAAGTACCCAGAGT +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMTHSYQ*SISTQS
Trigger: ACTCTGGGTACTTATGGACCATTGGTAAGAATGTGT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGTCTAACACATTCTTACCAATaGTCCATAAGTACCCAGAGT +
Preference number: 4 (lower is better)
Translates to: ALITGLHPNGLLDPENGLTHSYQ*SISTQS
Trigger: ACTCTGGGTACTTATGGACCATTGGTAAGAATGTGT...TAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGGCCACCCTCCAAACCTaGCTGAGGGTCGGTGTAATC +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRATLQT*LRVGVI
Trigger: GATTACACCGACCCTCAGCCAGGTTTGGAGGGTGGC...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGCCCTGTACATAGCTTaGACCCACAAAATTCGATCT +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFALYIA*THKIRS
Trigger: AGATCGAATTTTGTGGGTCCAAGCTATGTACAGGGC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATCAAAGAGGGAAGCGTaGTCAAAGTTACAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGSKREA*SKLQGL
Trigger: CAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCTCGGACTCCATTTCTaGCGCAATACTCATCTAACA +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFLGLHF*RNTHLT
Trigger: TGTTAGATGAGTATTGCGCCAGAAATGGAGTCCGAG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGAAGTCATTCAGCAGCTaGAAGAGTGGGAAACTGTCC +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMKSFSS*KSGKLS
Trigger: GGACAGTTTCCCACTCTTCCAGCTGCTGAATGACTT...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAATATCTAACAACAAGTaGGGCGAACAGGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGISNNK*GEQVLQ
Trigger: CTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATAT...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGATATCTAACAACAAGTaGGGCGAACAGGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMISNNK*GEQVLQ
Trigger: CTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATAT...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTGGGTAGGTTCACATTaGGTAGGTTCACATTGGGTA +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFWVGSH*VGSHWV
Trigger: TACCCAATGTGAACCTACCCAATGTGAACCTACCCA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTCTTGCTGTTTAAGGTaGAATCCAGGACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMSCCLR*NPGPLA
Trigger: TGCAAGGGGTCCTGGATTCCACCTTAAACAGCAAGA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGGTGTCCTTCAATTTTaGCATACTCAGATAGGCGTG +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRGVLQF*HTQIGV
Trigger: CACGCCTATCTGAGTATGCCAAAATTGAAGGACACC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000177814.2
3UTR CAA 72 bp ATGCCTAGAGGGATGTTAACTGGTAGATTTGGTACTTaGGGTAGGTTCACATTGGGTAGGTTCACATTGGGT +
Preference number: 4 (lower is better)
Translates to: MPRGMLTGRFGT*GRFTLGRFTLG
Trigger: ACCCAATGTGAACCTACCCAATGTGAACCTACCCAAAGTACCAAATCTACCAGTTAACATCCCTCTAGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
3UTR CAA 72 bp CATGCATTGATTACAGGACTCCATCCCAATGGACTCTaGGACCCAGAGAATGGTCTAATCATCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: HALITGLHPNGL*DPENGLIIFFI
Trigger: GATGAAGAAGATGATTAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CAATTCTTAAGTGTTTCTCCCTCGATGCATAACAATGAACTCATTACCACTGGTCCACACGGTCACTCTTaGGAAACACCTCATAGTAGC +
Preference number: 4 (lower is better)
Translates to: QFLSVSPSMHNNELITTGPHGHS*ETPHSS
Trigger: GCTACTATGAGGTGTTTCTCAAGAGTGACCGTGTGG...ACCAGTGGTAATGAGTTCATTGTTATGCATCGAGGGAGAAACACTTAAGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTGCACTGTCTCCTTGCTaGGGCCGTCAATCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTALSPC*GRQSQV
Trigger: TACCTGAGATTGACGGCCTCAGCAAGGAGACAGTGC...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGCATTATACAGGAGTTaGTGTTCAAACTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMALYRS*CSNFLI
Trigger: GATCAAGAAGTTTGAACATCAACTCCTGTATAATGC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTATGATGGAAGCATTGTaGCTGCGTTTCAGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFMMEAL*LRFSFC
Trigger: ACAGAAACTGAAACGCAGTCACAATGCTTCCATCAT...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGATGATGGAAGCATTGTaGCTGCGTTTCAGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRMMEAL*LRFSFC
Trigger: ACAGAAACTGAAACGCAGTCACAATGCTTCCATCAT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp CAATTCTTAAGTGTTTCTCCCTCGATGCATAACAATGAACTCATTACCACTGGTCCTCACCCATGTCAATaGTGGAAGCATTGTGACTGC +
Preference number: 4 (lower is better)
Translates to: QFLSVSPSMHNNELITTGPHPCQ*WKHCDC
Trigger: GCAGTCACAATGCTTCCATCATTGACATGGGTGAGG...ACCAGTGGTAATGAGTTCATTGTTATGCATCGAGGGAGAAACACTTAAGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTGTGGAGAAGTCGCCTTaGGTGCCCCAGGTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTVEKSP*VPQVGL
Trigger: TAAACCAACCTGGGGCACTCAAGGCGACTTCTCCAC...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AAAATATCTGAGGGCAACACAAACTCTCAGAAGGATCCTGGTTACTACATAACGAACCCGTTCCAAGAGTaGGAGAGTAGCTTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: KISEGNTNSQKDPGYYITNPFQE*ESSFQS
Trigger: GCTTTGAAAGCTACTCTCTCACTCTTGGAACGGGTT...CGTTATGTAGTAACCAGGATCCTTCTGAGAGTTTGTGTTGCCCTCAGATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGAAACATGGTGCATATTaGCTGTGGGACTCGAAAATC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRKHGAY*LWDSKI
Trigger: GATTTTCGAGTCCCACAGTCAATATGCACCATGTTT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTAAACATGGTGCATATTaGCTGTGGGACTCGAAAATC +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFKHGAY*LWDSKI
Trigger: GATTTTCGAGTCCCACAGTCAATATGCACCATGTTT...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGCAAAGTTTTGTTGATTaGGCTTTGGCATCAACCATA +
Preference number: 4 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMQSFVD*ALASTI
Trigger: TATGGTTGATGCCAAAGCTCAATCAACAAAACTTTG...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTGCCTTCACCGTGAATaGCAGAAACGAAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFCLHRE*QKRRKQ
Trigger: TTGTTTTCTTCGTTTCTGTCATTCACGGTGAAGGCA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAAAGCTGCCTTCACCGTaGATGACAGAAACGAAGAAA +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGKLPSP*MTETKK
Trigger: TTTCTTCGTTTCTGTCATTCACGGTGAAGGCAGCTT...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGCATAGAGCTGTTCCTTaGTCAGAATCAACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRHRAVP*SESTQK
Trigger: CTTCTGAGTTGATTCTGAGCAAGGAACAGCTCTATG...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGTTGGCGTTGAGCTTCTaGACCTGGGTAGGGGGAACA +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRLALSF*TWVGGT
Trigger: TGTTCCCCCTACCCAGGTGCAGAAGCTCAACGCCAA...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTTGGCGTTGAGCTTCTaGACCTGGGTAGGGGGAACA +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTLALSF*TWVGGT
Trigger: TGTTCCCCCTACCCAGGTGCAGAAGCTCAACGCCAA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGGCCCATTTCCATGCTaGAAAGTTTTGTTGATTGAG +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRGPFPC*KVLLIE
Trigger: CTCAATCAACAAAACTTTGCAGCATGGAAATGGGCC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCTTGGCCCATTTCCATaGTGCAAAGTTTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENLGPFP*CKVLLI
Trigger: AATCAACAAAACTTTGCAGCATGGAAATGGGCCAAG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTGGTCTCATAGGTCTTaGTGTTTAAGGTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRWSHRS*CLRWNP
Trigger: TGGATTCCACCTTAAACAGCAAGACCTATGAGACCA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGCGGCCTACATTTTCTaGATCCTTTTGATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRAAYIF*ILLILF
Trigger: GAAGAGAATCAAAAGGATGCAGAAAATGTAGGCCGC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTACTCAGAAGCTGCACTaGCTGTCATCCGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTTQKLH*LSSGLA
Trigger: AGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGT...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATTTTACTTTAACAGCTaGCAGCGCATGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGFYFNS*QRMGCG
Trigger: TCCACAACCCATGCGCTGCCAGCTGTTAAAGTAAAA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTTTTACTTTAACAGCTaGCAGCGCATGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMFYFNS*QRMGCG
Trigger: TCCACAACCCATGCGCTGCCAGCTGTTAAAGTAAAA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATACACATTCTTACCAATaGTCCATAAGTACCCAGAGT +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENTHSYQ*SISTQS
Trigger: ACTCTGGGTACTTATGGACCATTGGTAAGAATGTGT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGCCCTGTACATAGCTTaGACCCACAAAATTCGATCT +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMALYIA*THKIRS
Trigger: AGATCGAATTTTGTGGGTCCAAGCTATGTACAGGGC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACTCGGACTCCATTTCTaGCGCAATACTCATCTAACA +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGLGLHF*RNTHLT
Trigger: TGTTAGATGAGTATTGCGCCAGAAATGGAGTCCGAG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GCATCAACCATAACATTAAACATGGTGCATATTGACTGTGGGACTCGAAAATCTTGTAGTGAAGAAGCGTaGGGTCAATCATCGCGCCAT +
Preference number: 4 (lower is better)
Translates to: ASTITLNMVHIDCGTRKSCSEEA*GQSSRH
Trigger: ATGGCGCGATGATTGACCCCACGCTTCTTCACTACA...AGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGTTATGGTTGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTTTGACCTCTTCTTGTaGTACTGGAGTGACAATATC +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENFDLFL*YWSDNI
Trigger: GATATTGTCACTCCAGTACCACAAGAAGAGGTCAAA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGATTCTCTTCAATTTTaGCATACTCAGATAGGCGTG +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENDSLQF*HTQIGV
Trigger: CACGCCTATCTGAGTATGCCAAAATTGAAGAGAATC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATATAAAATTGTGAGATaGGGGCATCCAGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGYKIVR*GHPAEA
Trigger: TGCCTCAGCTGGATGCCCCCATCTCACAATTTTATA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTTTGGGTCTCCCCATTaGGAAAAGCCTGGAACCGGT +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTFGSPH*EKPGTG
Trigger: ACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGCATTATACAGGAGTTaGTGTTCAAACTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENALYRS*CSNFLI
Trigger: GATCAAGAAGTTTGAACATCAACTCCTGTATAATGC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAATGATGGAAGCATTGTaGCTGCGTTTCAGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGMMEAL*LRFSFC
Trigger: ACAGAAACTGAAACGCAGTCACAATGCTTCCATCAT...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGAAGCGGCCTACATTTTaGATGGTTAAATCCATCACT +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRKRPTF*MVKSIT
Trigger: AGTGATGGATTTAACCATTCAAAATGTAGGCCGCTT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067491.14
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTCCTGCAGGTGTTTGTaGAACTTTCCATTGCACAAA +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMSCRCL*NFPLHK
Trigger: TTTGTGCAATGGAAAGTTTCACAAACACCTGCAGGA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATCCTGCAGGTGTTTGTaGAACTTTCCATTGCACAAA +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGSCRCL*NFPLHK
Trigger: TTTGTGCAATGGAAAGTTTCACAAACACCTGCAGGA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAAAACATGGTGCATATTaGCTGTGGGACTCGAAAATC +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGKHGAY*LWDSKI
Trigger: GATTTTCGAGTCCCACAGTCAATATGCACCATGTTT...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCAAAGTTTTGTTGATTaGGCTTTGGCATCAACCATA +
Preference number: 4 (lower is better)
Translates to: RHALITGLHPNGLLDPENQSFVD*ALASTI
Trigger: TATGGTTGATGCCAAAGCTCAATCAACAAAACTTTG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGCTGCAAAGTTTTGTTaGTTGAGCTTTGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMAAKFC*LSFGIN
Trigger: GTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATGCCTTCACCGTGAATaGCAGAAACGAAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGCLHRE*QKRRKQ
Trigger: TTGTTTTCTTCGTTTCTGTCATTCACGGTGAAGGCA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTATACATCTCCTCATTaGCCTTATCACGAAGGACAT +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRYTSPH*PYHEGH
Trigger: ATGTCCTTCGTGATAAGGTCAATGAGGAGATGTATA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTATACATCTCCTCATTaGCCTTATCACGAAGGACAT +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFYTSPH*PYHEGH
Trigger: ATGTCCTTCGTGATAAGGTCAATGAGGAGATGTATA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTCCATGCCATGCTTCTaGGCTCTATCTGCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTSMPCF*ALSASF
Trigger: GAAGGACGCAGATAGAGCTCAGAAGCATGGCATGGA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112658.8
CDS-3UTR GCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGCATAGAGCTGTTCCTTaGTCAGAATCAACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMHRAVP*SESTQK
Trigger: CTTCTGAGTTGATTCTGAGCAAGGAACAGCTCTATG...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGTCGTCTGATCTGGGCTaGCTGCTCATCTGGATTGTC +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRSSDLG*LLIWIV
Trigger: GACAATCCAGATGAGCAGGCAGCCCAGATCAGACGA...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTCGTCTGATCTGGGCTaGCTGCTCATCTGGATTGTC +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTSSDLG*LLIWIV
Trigger: GACAATCCAGATGAGCAGGCAGCCCAGATCAGACGA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTTGTTCATCATCACTTaGAAATATCACCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFLFIIT*KYHRVS
Trigger: GGAGACACGGTGATATTTGCAAGTGATGATGAACAA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTTGTTCATCATCACTTaGAAATATCACCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRLFIIT*KYHRVS
Trigger: GGAGACACGGTGATATTTGCAAGTGATGATGAACAA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGGCCCATTTCCATGCTaGAAAGTTTTGTTGATTGAG +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMGPFPC*KVLLIE
Trigger: CTCAATCAACAAAACTTTGCAGCATGGAAATGGGCC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAGGCCCATTTCCATGCTaGAAAGTTTTGTTGATTGAG +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGGPFPC*KVLLIE
Trigger: CTCAATCAACAAAACTTTGCAGCATGGAAATGGGCC...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCTTGGCCCATTTCCATaGTGCAAAGTTTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFLGPFP*CKVLLI
Trigger: AATCAACAAAACTTTGCAGCATGGAAATGGGCCAAG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATCATCAGCTACGATTTaGGTCTCCCCATTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGSSATI*VSPLRK
Trigger: TTTTCTCAATGGGGAGACCCAAATCGTAGCTGATGA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGACACATTCTTACCAATaGTCCATAAGTACCCAGAGT +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRTHSYQ*SISTQS
Trigger: ACTCTGGGTACTTATGGACCATTGGTAAGAATGTGT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGACAGGTTTGTGCGACTaGCCAGTGGCCCTGTACATA +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRTGLCD*PVALYI
Trigger: TATGTACAGGGCCACTGGCCAGTCGCACAAACCTGT...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTTGAGCTTCTGCACCTaGGTAGGGGGAACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTLSFCT*VGGTGL
Trigger: CAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTCTGTTACCATGGACATaGGACGCGCAGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTLLPWT*DAQKAK
Trigger: CTTTGCCTTCTGCGCGTCCCATGTCCATGGTAACAG...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTTTGACCTCTTCTTGTaGTACTGGAGTGACAATATC +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRFDLFL*YWSDNI
Trigger: GATATTGTCACTCCAGTACCACAAGAAGAGGTCAAA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGGCCTACATTTTGAATaGTTAAATCCATCACTTGGG +
Preference number: 4 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRGLHFE*LNPSLG
Trigger: CCCAAGTGATGGATTTAACCATTCAAAATGTAGGCC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000067491.14
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTGGGTAGGTTCACATTaGGTAGGTTACTGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMWVGSH*VGYWLN
Trigger: GTTTAACCAGTAACCTACCCAATGTGAACCTACCCA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
3UTR CAA 72 bp GCCTTTTTCAAAGAAAGCTGTCTGGTAGTAATATCTTaGAAGCTGCAATATCCCAGCCTACAGTGGACTATG +
Preference number: 4 (lower is better)
Translates to: AFFKESCLVVIS*KLQYPSLQWTM
Trigger: CATAGTCCACTGTAGGCTGGGATATTGCAGCTTCAAAGATATTACTACCAGACAGCTTTCTTTGAAAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGCCACACGGTCACTCTTaGGAAACACCTCATAGTAGC +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRPHGHS*ETPHSS
Trigger: GCTACTATGAGGTGTTTCTCAAGAGTGACCGTGTGG...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGGGACAGCAGGACATCTaGCTTAGAAAGCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRGQQDI*LRKLVL
Trigger: GAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTCC...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTAGCTGTAGGAGTTCCTaGGGCTCTGCCTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTSCRSS*GSAFFS
Trigger: AGAAAAGAAGGCAGAGCCTCAGGAACTCCTACAGCT...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTACTGGTTAAACTCTTaGCTGGCTCCCATGACTCCC +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTYWLNS*LAPMTP
Trigger: GGGAGTCATGGGAGCCAGTCAAGAGTTTAACCAGTA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCAAAGTTTTGTTGATTaGGCTTTGGCATCAACCATA +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFQSFVD*ALASTI
Trigger: TATGGTTGATGCCAAAGCTCAATCAACAAAACTTTG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATATACATCTCCTCATTaGCCTTATCACGAAGGACAT +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGYTSPH*PYHEGH
Trigger: ATGTCCTTCGTGATAAGGTCAATGAGGAGATGTATA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTATACATCTCCTCATTaGCCTTATCACGAAGGACAT +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMYTSPH*PYHEGH
Trigger: ATGTCCTTCGTGATAAGGTCAATGAGGAGATGTATA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATTGTTCATCATCACTTaGAAATATCACCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGLFIIT*KYHRVS
Trigger: GGAGACACGGTGATATTTGCAAGTGATGATGAACAA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTCATCGCGCCATTTTCTaGTCGTTCCAGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTHRAIF*SFQQVS
Trigger: AGAGACTTGCTGGAACGAGCAGAAAATGGCGCGATG...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACTTGGCCCATTTCCATaGTGCAAAGTTTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGLGPFP*CKVLLI
Trigger: AATCAACAAAACTTTGCAGCATGGAAATGGGCCAAG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCTTCTGAGCTCTATCTaGGTCTTTTACAGAACTATA +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFLLSSI*VFYRTI
Trigger: TATAGTTCTGTAAAAGACGCAGATAGAGCTCAGAAG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTGCCACTCAGATTGTTTaGGGCTATTTGGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTATQIV*GYLGWD
Trigger: ATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGC...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGCGTAAAATTGTGAGATaGGGGCATCCAGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRRKIVR*GHPAEA
Trigger: TGCCTCAGCTGGATGCCCCCATCTCACAATTTTACG...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTGTAGTGAAGAAGCGTaGGGTCAATCATCGCGCCAT +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTCSEEA*GQSSRH
Trigger: ATGGCGCGATGATTGACCCCACGCTTCTTCACTACA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTTTTCCCTTCAATTTTaGCATACTCAGATAGGCGTG +
Preference number: 4 (lower is better)
Translates to: VLLTKGTHLAAELCILSMFSLQF*HTQIGV
Trigger: CACGCCTATCTGAGTATGCCAAAATTGAAGGGAAAA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067491.14
CDS-3UTR CCA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAGATTCTCTTCAATTTTaGCATACTCAGATAGGCGTG +
Preference number: 4 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGDSLQF*HTQIGV
Trigger: CACGCCTATCTGAGTATGCCAAAATTGAAGAGAATC...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
CDS-3UTR TCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTGAATCATTAAGTCTGTaGTCCAAAGTCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTESLSL*SKVSRC
Trigger: GCAGCGGCTGACTTTGGATCACAGACTTAATGATTC...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGGCTTTTTGGCGGGAGTaGTTAAGCGGCCTACATTTT +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRAFWRE*LSGLHF
Trigger: AAAATGTAGGCCGCTTAATCACTCCCGCCAAAAAGC...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTCCTGGCTATTTGATCTaGCATTTGGAGACGTCCATC +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTPGYLI*HLETSI
Trigger: GATGGACGTCTCCAAATGGCAGATCAAATAGCCAGG...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTTGACTAGAGCAGCCTaGTCTAGGCATTTACGGATG +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTLTRAA*SRHLRM
Trigger: CATCCGTAAATGCCTAGAGCAGGCTGCTCTAGTCAA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGTTGACTAGAGCAGCCTaGTCTAGGCATTTACGGATG +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRLTRAA*SRHLRM
Trigger: CATCCGTAAATGCCTAGAGCAGGCTGCTCTAGTCAA...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR GCA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCTTCTGAGCTCTATCTaGTTCATTTACACAAAATTG +
Preference number: 4 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFLLSSI*FIYTKL
Trigger: CAATTTTGTGTAAATGAAGCAGATAGAGCTCAGAAG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112657.9
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTCAAAGAGGGAAGCGTaGTCAAAGTTACAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTSKREA*SKLQGL
Trigger: CAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTAAGTCATTCAGCAGCTaGAAGAGTGGGAAACTGTCC +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTKSFSS*KSGKLS
Trigger: GGACAGTTTCCCACTCTTCCAGCTGCTGAATGACTT...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTATATCTAACAACAAGTaGGGCGAACAGGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTISNNK*GEQVLQ
Trigger: CTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATAT...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTCCCCTCGTCATATCTaGATAACTTTGCCAGTACGC +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTSPRHI*ITLPVR
Trigger: GCGTACTGGCAAAGTTATCCAGATATGACGAGGGGA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGTCTTGCTGTTTAAGGTaGAATCCAGGACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRSCCLR*NPGPLA
Trigger: TGCAAGGGGTCCTGGATTCCACCTTAAACAGCAAGA...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTCTTGCTGTTTAAGGTaGAATCCAGGACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTSCCLR*NPGPLA
Trigger: TGCAAGGGGTCCTGGATTCCACCTTAAACAGCAAGA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
3UTR CAA 72 bp TTAACTGGTAGATTTGGTACTTTGGGTAGGTTCACATaGGGTAGGTTCACATTGGGTAGGTTACTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: LTGRFGTLGRFT*GRFTLGRLLVK
Trigger: TTTAACCAGTAACCTACCCAATGTGAACCTACCCAATGTGAACCTACCCAAAGTACCAAATCTACCAGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTAAGCTGCCTTCACCGTaGATGACAGAAACGAAGAAA +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTKLPSP*MTETKK
Trigger: TTTCTTCGTTTCTGTCATTCACGGTGAAGGCAGCTT...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTCCATGCCATGCTTCTaGGCTCTATCTGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTSMPCF*ALSASF
Trigger: AAATGAAGCAGATAGAGCTCAGAAGCATGGCATGGA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112657.9
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTAGATGGCATCAAACTTaGCCATCCAAGAGCTTAGCA +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTRWHQT*PSKSLA
Trigger: TGCTAAGCTCTTGGATGGCCAAGTTTGATGCCATCT...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTTTTACTTTAACAGCTaGCAGCGCATGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTFYFNS*QRMGCG
Trigger: TCCACAACCCATGCGCTGCCAGCTGTTAAAGTAAAA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGGCCCTGTACATAGCTTaGACCCACAAAATTCGATCT +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRALYIA*THKIRS
Trigger: AGATCGAATTTTGTGGGTCCAAGCTATGTACAGGGC...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTGTTAAATCCATCACTTaGGAGGCCAAGCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTVKSIT*EAKQKT
Trigger: TGTCTTCTGCTTGGCCTCCCAAGTGATGGATTTAAC...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067491.14
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTGGGTAGGTTCACATTaGGTAGGTTCACATTGGGTA +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTWVGSH*VGSHWV
Trigger: TACCCAATGTGAACCTACCCAATGTGAACCTACCCA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR TCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGATGATGGAAGCATTGTaGCTGCGTTTCAGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRMMEAL*LRFSFC
Trigger: ACAGAAACTGAAACGCAGTCACAATGCTTCCATCAT...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGGCTGCAAAGTTTTGTTaGTTGAGCTTTGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRAAKFC*LSFGIN
Trigger: GTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGC...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGTGGTCTCATAGGTCTTaGTGTTTAAGGTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRWSHRS*CLRWNP
Trigger: TGGATTCCACCTTAAACAGCAAGACCTATGAGACCA...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTCATCAGCTACGATTTaGGTCTCCCCATTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTSSATI*VSPLRK
Trigger: TTTTCTCAATGGGGAGACCCAAATCGTAGCTGATGA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGTGGGTAGGTTCACATTaGGTAGGTTACTGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRWVGSH*VGYWLN
Trigger: GTTTAACCAGTAACCTACCCAATGTGAACCTACCCA...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR GCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTTGTTCATCATCACTTaGAAATATCACCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTLFIIT*KYHRVS
Trigger: GGAGACACGGTGATATTTGCAAGTGATGATGAACAA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTTTGACCTCTTCTTGTaGTACTGGAGTGACAATATC +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTFDLFL*YWSDNI
Trigger: GATATTGTCACTCCAGTACCACAAGAAGAGGTCAAA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CCA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGTTTGACCTCTTCTTGTaGTACTGGAGTGACAATATC +
Preference number: 4 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRFDLFL*YWSDNI
Trigger: GATATTGTCACTCCAGTACCACAAGAAGAGGTCAAA...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR TCA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTGCATTATACAGGAGTTaGTGTTCAAACTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTALYRS*CSNFLI
Trigger: GATCAAGAAGTTTGAACATCAACTCCTGTATAATGC...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CCA 90 bp TCAACTCAGAAGCTGCACTGGCTGTCATCCGGGCTTGCTGCTTCCTaGGGTCCTCCTCACCACGGTAGATGGCATCAAACTTGGCCATCC +
Preference number: 5 (lower is better)
Translates to: STQKLHWLSSGLAAS*GPPHHGRWHQTWPS
Trigger: GGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGGAGGACCCCAGGAAGCAGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS TCA 90 bp CGTCAATCTCAGGTAGGCTGCGCACCCTCTTCTCGATGTGTTTCTTaGAGACCTCCCGAGAGTCATTGGCTGAGCAGCCCCCACTCTGCA +
Preference number: 5 (lower is better)
Translates to: RQSQVGCAPSSRCVS*RPPESHWLSSPHSA
Trigger: TGCAGAGTGGGGGCTGCTCAGCCAATGACTCTCGGGAGGTCTTCAAGAAACACATCGAGAAGAGGGTGCGCAGCCTACCTGAGATTGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CCA 90 bp TCATCCGGGCTTGCTGCTTCCTGGGGTCCTCCTCACCACGGTAGATaGCATCAAACTTGGCCATCCAAGAGCTTAGCACTGTCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: SSGLAASWGPPHHGR*HQTWPSKSLALSPC
Trigger: GCAAGGAGACAGTGCTAAGCTCTTGGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGGAGGACCCCAGGAAGCAGCAAGCCCGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CCA 90 bp GCGTTGAGCTTCTGCACCTGGGTAGGGGGAACAGGTTTGTGCGACTaGCCAGTGGCCCTGTACATAGCTTGGACCCACAAAATTCGATCT +
Preference number: 5 (lower is better)
Translates to: ALSFCTWVGGTGLCD*PVALYIAWTHKIRS
Trigger: AGATCGAATTTTGTGGGTCCAAGCTATGTACAGGGCCACTGGCCAGTCGCACAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGGCTGTCATCCGGGCTaGCTGCTTCCTGGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMGCHPG*LLPGVL
Trigger: GAGGACCCCAGGAAGCAGCAAGCCCGGATGACAGCC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CCCTCACTCACTGACGCTGTAGCTTCCTCCACAGTGAGACGGTTTCGGATGGTCTGCCACTCAGATTGTTaGGGGCTATTTGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: PSLTDAVASSTVRRFRMVCHSDC*GLFGVG
Trigger: TCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCA...GACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS TCA 90 bp TGGCATCAAACTTGGCCATCCAAGAGCTTAGCACTGTCTCCTTGCTaGGGCCGTCAATCTCAGGTAGGCTGCGCACCCTCTTCTCGATGT +
Preference number: 5 (lower is better)
Translates to: WHQTWPSKSLALSPC*GRQSQVGCAPSSRC
Trigger: ACATCGAGAAGAGGGTGCGCAGCCTACCTGAGATTGACGGCCTCAGCAAGGAGACAGTGCTAAGCTCTTGGATGGCCAAGTTTGATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGACCTCCCGAGAGTCATaGGCTGAGCAGCCCCCACTC +
Preference number: 5 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMTSRES*AEQPPL
Trigger: GAGTGGGGGCTGCTCAGCCAATGACTCTCGGGAGGT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp GGCCACGTCCATCCCGGGTTTAGGCACGTCCACATACTTGGAAGCTGCCTTCACTTTGTGCCACTCAGATaGTTTGGGGCTATTTGGGGT +
Preference number: 5 (lower is better)
Translates to: GHVHPGFRHVHILGSCLHFVPLR*FGAIWG
Trigger: ACCCCAAATAGCCCCAAACAATCTGAGTGGCACAAA...GTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS TCA 90 bp TGGCTATTTGATCTGCCATTTGGAGACGTCCATCCAGCTCTCGTCTaGTCTGGGCTGCCTGCTCATCTGGATTGTCCAGCTGACAGGCAT +
Preference number: 5 (lower is better)
Translates to: WLFDLPFGDVHPALV*SGLPAHLDCPADRH
Trigger: ATGCCTGTCAGCTGGACAATCCAGATGAGCAGGCAGCCCAGATCAGACGAGAGCTGGATGGACGTCTCCAAATGGCAGATCAAATAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATACCTCCCGAGAGTCATaGGCTGAGCAGCCCCCACTC +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENTSRES*AEQPPL
Trigger: GAGTGGGGGCTGCTCAGCCAATGACTCTCGGGAGGT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGGCTGTCATCCGGGCTaGCTGCTTCCTGGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFGCHPG*LLPGVL
Trigger: GAGGACCCCAGGAAGCAGCAAGCCCGGATGACAGCC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGCTGGCAGCGCATGGGTaGTGGAGAAGTCGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMLAAHG*WRSRLE
Trigger: CTCAAGGCGACTTCTCCACAACCCATGCGCTGCCAG...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGACCCGCCCGAGTTCCTaGTCTTCCAAGGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMTRPSS*SSKART
Trigger: TGTCCTGGCCTTGGAAGACAAGGAACTCGGGCGGGT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CTTGCCATCAGTTTTAGCCGCTGCTCTAAGTGTTTTCCAAACTCTTCCTCAGGCACCCGCCCGAGTTCCTaGTCTTCCAAGGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: LAISFSRCSKCFPNSSSGTRPSS*SSKART
Trigger: TGTCCTGGCCTTGGAAGACAAGGAACTCGGGCGGGT...GCCTGAGGAAGAGTTTGGAAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS TCA 90 bp CATGTGGCTCGGCGTGGTGCTCCTCGTTTTGTTGCAGTACTTCGATaGCTAGTTCAGCAAGACGGATTGTGTCTTCGAGCTTTTTGGCGG +
Preference number: 5 (lower is better)
Translates to: HVARRGAPRFVAVLR*LVQQDGLCLRAFWR
Trigger: CCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAACTAGTCATCGAAGTACTGCAACAAAACGAGGAGCACCACGCCGAGCCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS GCA 90 bp GCTGCATCCATGTCCACTGCAAAGAGTGACAGGAACGTCTCCGCATaGTCCACCATTAAGTCTGACCACCACGCAAAGGCTTCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: AASMSTAKSDRNVSA*STIKSDHHAKASPL
Trigger: TAAAGGAGAAGCCTTTGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACATGGATGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTACCTCCCGAGAGTCATaGGCTGAGCAGCCCCCACTC +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFTSRES*AEQPPL
Trigger: GAGTGGGGGCTGCTCAGCCAATGACTCTCGGGAGGT...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGACCTCCCGAGAGTCATaGGCTGAGCAGCCCCCACTC +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRTSRES*AEQPPL
Trigger: GAGTGGGGGCTGCTCAGCCAATGACTCTCGGGAGGT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TGTCCACTGCAAAGAGTGACAGGAACGTCTCCGCATGCTCCACCATTAAGTCTGCTTAGCACTGTCTCCTaGCTGAGGCCGTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: CPLQRVTGTSPHAPPLSLLSTVS*LRPSIS
Trigger: TGAGATTGACGGCCTCAGCAAGGAGACAGTGCTAAG...CAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGGCTGTCATCCGGGCTaGCTGCTTCCTGGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: VLLTKGTHLAAELCILSMGCHPG*LLPGVL
Trigger: GAGGACCCCAGGAAGCAGCAAGCCCGGATGACAGCC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp ATCAGATCCACATATCTAACAACAAGTGGGGCGAACAGGTCCTGCAGGTGTTTGTTGGCCATGAGCAGGTaGACGGAGGACTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: IRSTYLTTSGANRSCRCLLAMSR*TEDFSS
Trigger: GGAGCTGAAGTCCTCCGTCAACCTGCTCATGGCCAA...CAAACACCTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGTGGATCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCTGGCAGCGCATGGGTaGTGGAGAAGTCGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENLAAHG*WRSRLE
Trigger: CTCAAGGCGACTTCTCCACAACCCATGCGCTGCCAG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATACCCGCCCGAGTTCCTaGTCTTCCAAGGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENTRPSS*SSKART
Trigger: TGTCCTGGCCTTGGAAGACAAGGAACTCGGGCGGGT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp GGCCACGTCCATCCCGGGTTTAGGCACGTCCACATACTTGGAAGCTGCCTTCACTTACGGATGACAGTTTaGACCTCTTCTTGTGGTACT +
Preference number: 5 (lower is better)
Translates to: GHVHPGFRHVHILGSCLHLRMTV*TSSCGT
Trigger: AGTACCACAAGAAGAGGTCAAAACTGTCATCCGTAA...GTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGGCACGTCCACATACTaGGAAGCTGCCTTCACCGTG +
Preference number: 5 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMGTSTY*EAAFTV
Trigger: CACGGTGAAGGCAGCTTCCAAGTATGTGGACGTGCC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS TCA 90 bp CTATCTGCTTCATTTACACAAAATTGTGAGATGGGGGCATCCAGCTaGGGCACATTTCCGCCCTTGGCGTTGAGCTTCTGCACCTGGGTA +
Preference number: 5 (lower is better)
Translates to: LSASFTQNCEMGASS*GTFPPLALSFCTWV
Trigger: TACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAAATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTGTGTAAATGAAGCAGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112657.9
CDS CCA 90 bp TTTGGAGACTGTCATTTTGTGCCACTCAGATTGTTTGGGGCTATTTaGGGTGGGATGGAGGATCACCCGCCCGAGTTCCTTGTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: FGDCHFVPLRLFGAI*GGMEDHPPEFLVFQ
Trigger: TTGGAAGACAAGGAACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCACAAAATGACAGTCTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGTCTGTAGCTGCTGTTaGCTGATCTTCTGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMVCSCC*LIFCCR
Trigger: GCGGCAGCAGAAGATCAGCAAACAGCAGCTACAGAC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGCATGCTCTCCAAGTaGGCCATGAGCAGGTTGACG +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENGMLSK*AMSRLT
Trigger: CGTCAACCTGCTCATGGCCAACTTGGAGAGCATGCC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AGAGTGACAGGAACGTCTCCGCATGCTCCACCATTAAGTCTGACCACCACGCAACACCCTCCACCTCCATaGTGCAGTATACAATTCGAT +
Preference number: 5 (lower is better)
Translates to: RVTGTSPHAPPLSLTTTQHPPPP*CSIQFD
Trigger: ATCGAATTGTATACTGCACAATGGAGGTGGAGGGTG...TTGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCTGGCAGCGCATGGGTaGTGGAGAAGTCGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFLAAHG*WRSRLE
Trigger: CTCAAGGCGACTTCTCCACAACCCATGCGCTGCCAG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp GCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGTCTACCTTCTTTGACTGCATaGAAGAAGGCTCGGCCACCC +
Preference number: 5 (lower is better)
Translates to: ALITGLHPNGLLDPENGLPSLTA*KKARPP
Trigger: GGGTGGCCGAGCCTTCTTCAATGCAGTCAAAGAAGG...TAGACCATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CTAGTAATAGCTGGACCAAGACCCATGAGGCAGCAGTTGTGGAAACTGAACATTTTTCCGCCCTTGGCGTaGAGCTTCTGCACCTGGGTA +
Preference number: 5 (lower is better)
Translates to: LVIAGPRPMRQQLWKLNIFPPLA*SFCTWV
Trigger: TACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAAA...AATGTTCAGTTTCCACAACTGCTGCCTCATGGGTCTTGGTCCAGCTATTACTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGCACGTCCACATACTaGGAAGCTGCCTTCACCGTG +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENGTSTY*EAAFTV
Trigger: CACGGTGAAGGCAGCTTCCAAGTATGTGGACGTGCC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS GCA 90 bp CACCACGCAAAGGCTTCTCCTTTATCAACATGTGGCTCGGCGTGGTaGTCCTCGTTTTGTTGCAGTACTTCGATGACTAGTTCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: HHAKASPLSTCGSAW*SSFCCSTSMTSSAR
Trigger: TCTTGCTGAACTAGTCATCGAAGTACTGCAACAAAACGAGGAGCACCACGCCGAGCCACATGTTGATAAAGGAGAAGCCTTTGCGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGTCTGTAGCTGCTGTTaGCTGATCTTCTGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENVCSCC*LIFCCR
Trigger: GCGGCAGCAGAAGATCAGCAAACAGCAGCTACAGAC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGCCTGGAACCGGTCTTaGACAGTCTGTAGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENAWNRS*TVCSCC
Trigger: ACAGCAGCTACAGACTGTCAAAGACCGGTTCCAGGC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AAAATATCTGAGGGCAACACAAACTCTCAGAAGGATCCTGGTTACTACATAACGACCTCCCGAGAGTCATaGGCTGAGCAGCCCCCACTC +
Preference number: 5 (lower is better)
Translates to: KISEGNTNSQKDPGYYITTSRES*AEQPPL
Trigger: GAGTGGGGGCTGCTCAGCCAATGACTCTCGGGAGGT...CGTTATGTAGTAACCAGGATCCTTCTGAGAGTTTGTGTTGCCCTCAGATATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGCGTTCCCTGGCTATTaGATCTGCCATTTGGAGACG +
Preference number: 5 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMAFPGY*ICHLET
Trigger: CGTCTCCAAATGGCAGATCAAATAGCCAGGGAACGC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CTTGCCATCAGTTTTAGCCGCTGCTCTAAGTGTTTTCCAAACTCTTCCTCAGGCGCGTTCCCTGGCTATTaGATCTGCCATTTGGAGACG +
Preference number: 5 (lower is better)
Translates to: LAISFSRCSKCFPNSSSGAFPGY*ICHLET
Trigger: CGTCTCCAAATGGCAGATCAAATAGCCAGGGAACGC...GCCTGAGGAAGAGTTTGGAAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTTGGCCATGAGCAGGTaGACGGAGGACTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFLAMSR*TEDFSS
Trigger: GGAGCTGAAGTCCTCCGTCAACCTGCTCATGGCCAA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTTGGCCATGAGCAGGTaGACGGAGGACTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRLAMSR*TEDFSS
Trigger: GGAGCTGAAGTCCTCCGTCAACCTGCTCATGGCCAA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGGCATGCTCTCCAAGTaGGCCATGAGCAGGTTGACG +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRGMLSK*AMSRLT
Trigger: CGTCAACCTGCTCATGGCCAACTTGGAGAGCATGCC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGGCACGTCCACATACTaGGAAGCTGCCTTCACCGTG +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFGTSTY*EAAFTV
Trigger: CACGGTGAAGGCAGCTTCCAAGTATGTGGACGTGCC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS TCA 90 bp GACTTCCATGATCACCACCTCCAAGGAGAAGGACAGCAGGACATCTaGCTTAGAAAGCTGGTTCTCACTCTCCTCACCCATGTCAATGAT +
Preference number: 5 (lower is better)
Translates to: DFHDHHLQGEGQQDI*LRKLVLTLLTHVND
Trigger: ATCATTGACATGGGTGAGGAGAGTGAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTCCTTCTCCTTGGAGGTGGTGATCATGGAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS GCA 90 bp TCTCCTTTATCAACATGTGGCTCGGCGTGGTGCTCCTCGTTTTGTTaGAGTACTTCGATGACTAGTTCAGCAAGACGGATTGTGTCTTCG +
Preference number: 5 (lower is better)
Translates to: SPLSTCGSAWCSSFC*STSMTSSARRIVSS
Trigger: CGAAGACACAATCCGTCTTGCTGAACTAGTCATCGAAGTACTGCAACAAAACGAGGAGCACCACGCCGAGCCACATGTTGATAAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGTCTGTAGCTGCTGTTaGCTGATCTTCTGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRVCSCC*LIFCCR
Trigger: GCGGCAGCAGAAGATCAGCAAACAGCAGCTACAGAC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATTGGCCATGAGCAGGTaGACGGAGGACTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGLAMSR*TEDFSS
Trigger: GGAGCTGAAGTCCTCCGTCAACCTGCTCATGGCCAA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGGCATGCTCTCCAAGTaGGCCATGAGCAGGTTGACG +
Preference number: 5 (lower is better)
Translates to: VLLTKGTHLAAELCILSMGMLSK*AMSRLT
Trigger: CGTCAACCTGCTCATGGCCAACTTGGAGAGCATGCC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATTGAACTCTCCACCCTaGGACACCGGCATGCTCTCC +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGLNSPP*DTGMLS
Trigger: GGAGAGCATGCCGGTGTCCAAGGGTGGAGAGTTCAA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTTGAACTCTCCACCCTaGGACACCGGCATGCTCTCC +
Preference number: 5 (lower is better)
Translates to: VLLTKGTHLAAELCILSMLNSPP*DTGMLS
Trigger: GGAGAGCATGCCGGTGTCCAAGGGTGGAGAGTTCAA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTGCCACTCAGATTGTTaGGGGCTATTTGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENCHSDC*GLFGVG
Trigger: TCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGCCTTCTTTGACTGCATaGAAGAAGGCTCGGCCACCC +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRPSLTA*KKARPP
Trigger: GGGTGGCCGAGCCTTCTTCAATGCAGTCAAAGAAGG...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCCTTCTTTGACTGCATaGAAGAAGGCTCGGCCACCC +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFPSLTA*KKARPP
Trigger: GGGTGGCCGAGCCTTCTTCAATGCAGTCAAAGAAGG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTTTCCGCCCTTGGCGTaGAGCTTCTGCACCTGGGTA +
Preference number: 5 (lower is better)
Translates to: VLLTKGTHLAAELCILSMFPPLA*SFCTWV
Trigger: TACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAAA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCTTAGCACTGTCTCCTaGCTGAGGCCGTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFLSTVS*LRPSIS
Trigger: TGAGATTGACGGCCTCAGCAAGGAGACAGTGCTAAG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGGGCTGTCATCCGGGCTaGCTGCTTCCTGGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRGCHPG*LLPGVL
Trigger: GAGGACCCCAGGAAGCAGCAAGCCCGGATGACAGCC...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTATTTGATCTGCCATTaGGAGACGTCCATCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMYLICH*ETSIQL
Trigger: GAGCTGGATGGACGTCTCCAAATGGCAGATCAAATA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGCGTTCCCTGGCTATTaGATCTGCCATTTGGAGACG +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRAFPGY*ICHLET
Trigger: CGTCTCCAAATGGCAGATCAAATAGCCAGGGAACGC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CAATTCTTAAGTGTTTCTCCCTCGATGCATAACAATGAACTCATTACCACTGGTCTGGCAGCGCATGGGTaGTGGAGAAGTCGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: QFLSVSPSMHNNELITTGLAAHG*WRSRLE
Trigger: CTCAAGGCGACTTCTCCACAACCCATGCGCTGCCAG...ACCAGTGGTAATGAGTTCATTGTTATGCATCGAGGGAGAAACACTTAAGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTGCCACTCAGATTGTTaGGGGCTATTTGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFCHSDC*GLFGVG
Trigger: TCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTTTGTGCCACTCAGATaGTTTGGGGCTATTTGGGGT +
Preference number: 5 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMFVPLR*FGAIWG
Trigger: ACCCCAAATAGCCCCAAACAATCTGAGTGGCACAAA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGCCTTCTTTGACTGCATaGAAGAAGGCTCGGCCACCC +
Preference number: 5 (lower is better)
Translates to: VLLTKGTHLAAELCILSMPSLTA*KKARPP
Trigger: GGGTGGCCGAGCCTTCTTCAATGCAGTCAAAGAAGG...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGTGTCTTCGAGCTTTTaGGCGGGAGTGATTAAGCGG +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFVSSSF*AGVIKR
Trigger: CCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACAC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGTGTCTTCGAGCTTTTaGGCGGGAGTGATTAAGCGG +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRVSSSF*AGVIKR
Trigger: CCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACAC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGTTCAGCAAGACGGATaGTGTCTTCGAGCTTTTTGG +
Preference number: 5 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMVQQDG*CLRAFW
Trigger: CCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAAC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGCCCCTGTGGATAGATaGTGCAATGGAGGACTCCAT +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRAPVDR*CNGGLH
Trigger: ATGGAGTCCTCCATTGCACAATCTATCCACAGGGGC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGTTACTGGTTAAACTCTaGACTGGCTCCCATGACTCC +
Preference number: 5 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMLLVKL*TGSHDS
Trigger: GGAGTCATGGGAGCCAGTCAAGAGTTTAACCAGTAA...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGATGGTATTGATGCTCTaGGCCCATTTCCATGCTGCA +
Preference number: 5 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMMVLML*AHFHAA
Trigger: TGCAGCATGGAAATGGGCCAAGAGCATCAATACCAT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACTTAGCACTGTCTCCTaGCTGAGGCCGTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGLSTVS*LRPSIS
Trigger: TGAGATTGACGGCCTCAGCAAGGAGACAGTGCTAAG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATGCCACTCAGATTGTTaGGGGCTATTTGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGCHSDC*GLFGVG
Trigger: TCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGAGAGTGCTTCATGTTTaGAGGCTTATCCATTCGGAC +
Preference number: 5 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMRVLHV*RLIHSD
Trigger: GTCCGAATGGATAAGCCTCAAAACATGAAGCACTCT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGTGTCTTCGAGCTTTTaGGCGGGAGTGATTAAGCGG +
Preference number: 5 (lower is better)
Translates to: VLLTKGTHLAAELCILSMVSSSF*AGVIKR
Trigger: CCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACAC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAGTGTCTTCGAGCTTTTaGGCGGGAGTGATTAAGCGG +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGVSSSF*AGVIKR
Trigger: CCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACAC...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGTGGTGCTCCTCGTTTaGTTGCAGTACTTCGATGAC +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRVVLLV*LQYFDD
Trigger: GTCATCGAAGTACTGCAACAAAACGAGGAGCACCAC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGTGGTGCTCCTCGTTTaGTTGCAGTACTTCGATGAC +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFVVLLV*LQYFDD
Trigger: GTCATCGAAGTACTGCAACAAAACGAGGAGCACCAC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAGCCCCTGTGGATAGATaGTGCAATGGAGGACTCCAT +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGAPVDR*CNGGLH
Trigger: ATGGAGTCCTCCATTGCACAATCTATCCACAGGGGC...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGACTCAATCATGTCACTaGCCATCAGTTTTAGCCGCT +
Preference number: 5 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMTQSCH*PSVLAA
Trigger: AGCGGCTAAAACTGATGGCAAGTGACATGATTGAGT...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGAATCCAGGACCCCTaGCAATCGGAAATCTCTATA +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENGIQDP*QSEISI
Trigger: TATAGAGATTTCCGATTGCAAGGGGTCCTGGATTCC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS TCA 90 bp CTAGTTCAGCAAGACGGATTGTGTCTTCGAGCTTTTTGGCGGGAGTaGTTAAGCGGCCTACATTTTGAATGGTTAAATCCATCACTTGGG +
Preference number: 5 (lower is better)
Translates to: LVQQDGLCLRAFWRE*LSGLHFEWLNPSLG
Trigger: CCCAAGTGATGGATTTAACCATTCAAAATGTAGGCCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067491.14
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTTCATCAGCTACGATTaGGGTCTCCCCATTGAGAAA +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENFISYD*GLPIEK
Trigger: TTTCTCAATGGGGAGACCCAAATCGTAGCTGATGAA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTATTTGATCTGCCATTaGGAGACGTCCATCCAGCTC +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRYLICH*ETSIQL
Trigger: GAGCTGGATGGACGTCTCCAAATGGCAGATCAAATA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTTCAGTTTCTGTAGCTaGAACTCTCCACCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRFSFCS*NSPPLD
Trigger: GTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGAA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTTCAGTTTCTGTAGCTaGAACTCTCCACCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFFSFCS*NSPPLD
Trigger: GTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGAA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGCACCCTCCACCTCCATaGTGCAGTATACAATTCGAT +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRHPPPP*CSIQFD
Trigger: ATCGAATTGTATACTGCACAATGGAGGTGGAGGGTG...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCACCCTCCACCTCCATaGTGCAGTATACAATTCGAT +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFHPPPP*CSIQFD
Trigger: ATCGAATTGTATACTGCACAATGGAGGTGGAGGGTG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTACCCGCCCGAGTTCCTaGTCTTCCAAGGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTTRPSS*SSKART
Trigger: TGTCCTGGCCTTGGAAGACAAGGAACTCGGGCGGGT...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATAGAGTGCTTCATGTTTaGAGGCTTATCCATTCGGAC +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENRVLHV*RLIHSD
Trigger: GTCCGAATGGATAAGCCTCAAAACATGAAGCACTCT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAGTGGTGCTCCTCGTTTaGTTGCAGTACTTCGATGAC +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGVVLLV*LQYFDD
Trigger: GTCATCGAAGTACTGCAACAAAACGAGGAGCACCAC...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTTACTGGTTAAACTCTaGACTGGCTCCCATGACTCC +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFLLVKL*TGSHDS
Trigger: GGAGTCATGGGAGCCAGTCAAGAGTTTAACCAGTAA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGTAGATTTGGTACTTaGGGTAGGTTCACATTGGGT +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENGRFGT*GRFTLG
Trigger: ACCCAATGTGAACCTACCCAAAGTACCAAATCTACC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATACTCAATCATGTCACTaGCCATCAGTTTTAGCCGCT +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENTQSCH*PSVLAA
Trigger: AGCGGCTAAAACTGATGGCAAGTGACATGATTGAGT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGATGGTATTGATGCTCTaGGCCCATTTCCATGCTGCA +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRMVLML*AHFHAA
Trigger: TGCAGCATGGAAATGGGCCAAGAGCATCAATACCAT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGGAATCCAGGACCCCTaGCAATCGGAAATCTCTATA +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFGIQDP*QSEISI
Trigger: TATAGAGATTTCCGATTGCAAGGGGTCCTGGATTCC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTGGTGTCCTTCAATTTaGGCATACTCAGATAGGCGT +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENWCPSI*AYSDRR
Trigger: ACGCCTATCTGAGTATGCCAAAATTGAAGGACACCA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp CTCTATAGCAGACCCCAGGGTCGCTCAGTTACAGATCAAAGTGCAATGTACATGGTCTTACCTTCAATTTaGGCATACTCAGATAGGCGT +
Preference number: 5 (lower is better)
Translates to: LYSRPQGRSVTDQSAMYMVLPSI*AYSDRR
Trigger: ACGCCTATCTGAGTATGCCAAAATTGAAGGTAAGAC...CATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTGCTATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTTCATCAGCTACGATTaGGGTCTCCCCATTGAGAAA +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFFISYD*GLPIEK
Trigger: TTTCTCAATGGGGAGACCCAAATCGTAGCTGATGAA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTTCATCAGCTACGATTaGGGTCTCCCCATTGAGAAA +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRFISYD*GLPIEK
Trigger: TTTCTCAATGGGGAGACCCAAATCGTAGCTGATGAA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATATTTGATCTGCCATTaGGAGACGTCCATCCAGCTC +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGYLICH*ETSIQL
Trigger: GAGCTGGATGGACGTCTCCAAATGGCAGATCAAATA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTTGGCCATGAGCAGGTaGACGGAGGACTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTLAMSR*TEDFSS
Trigger: GGAGCTGAAGTCCTCCGTCAACCTGCTCATGGCCAA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGTTGAACTCTCCACCCTaGGACACCGGCATGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRLNSPP*DTGMLS
Trigger: GGAGAGCATGCCGGTGTCCAAGGGTGGAGAGTTCAA...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTTCAGTTTCTGTAGCTaGAACTCTCCACCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: VLLTKGTHLAAELCILSMFSFCS*NSPPLD
Trigger: GTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGAA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGCACCCTCCACCTCCATaGTGCAGTATACAATTCGAT +
Preference number: 5 (lower is better)
Translates to: VLLTKGTHLAAELCILSMHPPPP*CSIQFD
Trigger: ATCGAATTGTATACTGCACAATGGAGGTGGAGGGTG...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTTTAGAAGCCTCTGCTaGATCTGTCTGAAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENFRSLC*ICLKFL
Trigger: GAGAAACTTCAGACAGATCAAGCAGAGGCTTCTAAA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATTTGTGCCACTCAGATaGTTTGGGGCTATTTGGGGT +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGFVPLR*FGAIWG
Trigger: ACCCCAAATAGCCCCAAACAATCTGAGTGGCACAAA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTAGAGTGCTTCATGTTTaGAGGCTTATCCATTCGGAC +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFRVLHV*RLIHSD
Trigger: GTCCGAATGGATAAGCCTCAAAACATGAAGCACTCT...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTTTCCGCCCTTGGCGTaGAGCTTCTGCACCTGGGTA +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTFPPLA*SFCTWV
Trigger: TACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAAA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGTTTCCGCCCTTGGCGTaGAGCTTCTGCACCTGGGTA +
Preference number: 5 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRFPPLA*SFCTWV
Trigger: TACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAAA...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTTACGGATGACAGTTTaGACCTCTTCTTGTGGTACT +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENLRMTV*TSSCGT
Trigger: AGTACCACAAGAAGAGGTCAAAACTGTCATCCGTAA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAGTTCAGCAAGACGGATaGTGTCTTCGAGCTTTTTGG +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGVQQDG*CLRAFW
Trigger: CCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAAC...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATTACTGGTTAAACTCTaGACTGGCTCCCATGACTCC +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGLLVKL*TGSHDS
Trigger: GGAGTCATGGGAGCCAGTCAAGAGTTTAACCAGTAA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGGTAGATTTGGTACTTaGGGTAGGTTCACATTGGGT +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRGRFGT*GRFTLG
Trigger: ACCCAATGTGAACCTACCCAAAGTACCAAATCTACC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTGGTAGATTTGGTACTTaGGGTAGGTTCACATTGGGT +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFGRFGT*GRFTLG
Trigger: ACCCAATGTGAACCTACCCAAAGTACCAAATCTACC...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCCATGCTGCAAAGTTTaGTTGATTGAGCTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENPCCKV*LIELWH
Trigger: ATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAATGGTATTGATGCTCTaGGCCCATTTCCATGCTGCA +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGMVLML*AHFHAA
Trigger: TGCAGCATGGAAATGGGCCAAGAGCATCAATACCAT...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTGGCACGTCCACATACTaGGAAGCTGCCTTCACCGTG +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTGTSTY*EAAFTV
Trigger: CACGGTGAAGGCAGCTTCCAAGTATGTGGACGTGCC...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGGGAATCCAGGACCCCTaGCAATCGGAAATCTCTATA +
Preference number: 5 (lower is better)
Translates to: VLLTKGTHLAAELCILSMGIQDP*QSEISI
Trigger: TATAGAGATTTCCGATTGCAAGGGGTCCTGGATTCC...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTGTCTGTAGCTGCTGTTaGCTGATCTTCTGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTVCSCC*LIFCCR
Trigger: GCGGCAGCAGAAGATCAGCAAACAGCAGCTACAGAC...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AAAATATCTGAGGGCAACACAAACTCTCAGAAGGATCCTGGTTACTACATAACGTATTTGATCTGCCATTaGGAGACGTCCATCCAGCTC +
Preference number: 5 (lower is better)
Translates to: KISEGNTNSQKDPGYYITYLICH*ETSIQL
Trigger: GAGCTGGATGGACGTCTCCAAATGGCAGATCAAATA...CGTTATGTAGTAACCAGGATCCTTCTGAGAGTTTGTGTTGCCCTCAGATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGCCTTCTTTGACTGCATaGAAGAAGGCTCGGCCACCC +
Preference number: 5 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRPSLTA*KKARPP
Trigger: GGGTGGCCGAGCCTTCTTCAATGCAGTCAAAGAAGG...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATCCTGAAATGTGTAATTaGATTTTCCAGCAGAACTCG +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENPEMCN*IFQQNS
Trigger: CGAGTTCTGCTGGAAAATCAAATTACACATTTCAGG...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTTACGGATGACAGTTTaGACCTCTTCTTGTGGTACT +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFLRMTV*TSSCGT
Trigger: AGTACCACAAGAAGAGGTCAAAACTGTCATCCGTAA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTTGGGTAGGTTCACATaGGGTAGGTTACTGGTTAAA +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFLGRFT*GRLLVK
Trigger: TTTAACCAGTAACCTACCCAATGTGAACCTACCCAA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATTGCTGCAAAGTTTTGTaGATTGAGCTTTGGCATCAA +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENCCKVL*IELWHQ
Trigger: TTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCA...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCATATCTGGATAACTTaGCCAGTACGCCTTCCAATA +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFHIWIT*PVRLPI
Trigger: TATTGGAAGGCGTACTGGCAAAGTTATCCAGATATG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATATATACATCTCCTCATaGACCTTATCACGAAGGACA +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENIYISS*TLSRRT
Trigger: TGTCCTTCGTGATAAGGTCAATGAGGAGATGTATAT...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS TCA 90 bp TGTCCAGCTGACAGGCATTATACAGGAGTTGATGTTCAAACTTCTTaGTCCCAAGAATGTTCTGAAACATCTCATAGAGCTGTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: CPADRHYTGVDVQTS*SQECSETSHRAVPC
Trigger: GCAAGGAACAGCTCTATGAGATGTTTCAGAACATTCTTGGGATCAAGAAGTTTGAACATCAACTCCTGTATAATGCCTGTCAGCTGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTCTTAGCACTGTCTCCTaGCTGAGGCCGTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTLSTVS*LRPSIS
Trigger: TGAGATTGACGGCCTCAGCAAGGAGACAGTGCTAAG...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCCAGAGAATGGCATTATACAGGAGTaGATGTTCAAACTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: RHALITGLHPNGLLDPENGIIQE*MFKLLD
Trigger: ATCAAGAAGTTTGAACATCAACTCCTGTATAATGCC...ATTCTCTGGGTCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGGCGTTCCCTGGCTATTaGATCTGCCATTTGGAGACG +
Preference number: 5 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRAFPGY*ICHLET
Trigger: CGTCTCCAAATGGCAGATCAAATAGCCAGGGAACGC...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATTTAGAAGCCTCTGCTaGATCTGTCTGAAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGFRSLC*ICLKFL
Trigger: GAGAAACTTCAGACAGATCAAGCAGAGGCTTCTAAA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTTGGAGACTGTCATTTaGTGCCACTCAGATTGTTTG +
Preference number: 5 (lower is better)
Translates to: VLLTKGTHLAAELCILSMLETVI*CHSDCL
Trigger: CAAACAATCTGAGTGGCACAAAATGACAGTCTCCAA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGTCAAAGTTACAGGGGTaGGAAGAGATAAATTCATCC +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRSKLQG*EEINSS
Trigger: GGATGAATTTATCTCTTCCAACCCCTGTAACTTTGA...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGCCTGAAATGTGTAATTaGATTTTCCAGCAGAACTCG +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRPEMCN*IFQQNS
Trigger: CGAGTTCTGCTGGAAAATCAAATTACACATTTCAGG...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATTACGGATGACAGTTTaGACCTCTTCTTGTGGTACT +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGLRMTV*TSSCGT
Trigger: AGTACCACAAGAAGAGGTCAAAACTGTCATCCGTAA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTTTTTCCCTTCAATTTaGGCATACTCAGATAGGCGT +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFFFPSI*AYSDRR
Trigger: ACGCCTATCTGAGTATGCCAAAATTGAAGGGAAAAA...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
42% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067491.14
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTGCCCCTGTGGATAGATaGTGCAATGGAGGACTCCAT +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTAPVDR*CNGGLH
Trigger: ATGGAGTCCTCCATTGCACAATCTATCCACAGGGGC...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGATTGGGTAGGTTCACATaGGGTAGGTTACTGGTTAAA +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGLGRFT*GRLLVK
Trigger: TTTAACCAGTAACCTACCCAATGTGAACCTACCCAA...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCATGCTGCAAAGTTTaGTTGATTGAGCTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGPCCKV*LIELWH
Trigger: ATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACATATCTGGATAACTTaGCCAGTACGCCTTCCAATA +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGHIWIT*PVRLPI
Trigger: TATTGGAAGGCGTACTGGCAAAGTTATCCAGATATG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGCATATCTGGATAACTTaGCCAGTACGCCTTCCAATA +
Preference number: 5 (lower is better)
Translates to: VLLTKGTHLAAELCILSMHIWIT*PVRLPI
Trigger: TATTGGAAGGCGTACTGGCAAAGTTATCCAGATATG...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGATATACATCTCCTCATaGACCTTATCACGAAGGACA +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRIYISS*TLSRRT
Trigger: TGTCCTTCGTGATAAGGTCAATGAGGAGATGTATAT...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTTAGTTTTAGGGGCATTATACAGGAGTaGATGTTCAAACTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: NAKLGLLGHKWSIAFSFRGIIQE*MFKLLD
Trigger: ATCAAGAAGTTTGAACATCAACTCCTGTATAATGCC...CCTAAAACTAAAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CATTACCACTGGTACACAATTTGCATTGTCACACAGACAAAATCGAGAGGGGAGGGCATTATACAGGAGTaGATGTTCAAACTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: HYHWYTICIVTQTKSRGEGIIQE*MFKLLD
Trigger: ATCAAGAAGTTTGAACATCAACTCCTGTATAATGCC...CTCCCCTCTCGATTTTGTCTGTGTGACAATGCAAATTGTGTACCAGTGGTAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TACATGGATAAATGCAAAGCTGGGTTTGCTGGGACACAAGTGGTCCATTGCTTTCCACAAAATTCGATCTaGTTCATCATCACTTGCAAA +
Preference number: 5 (lower is better)
Translates to: YMDKCKAGFAGTQVVHCFPQNSI*FIITCK
Trigger: TTTGCAAGTGATGATGAACAAGATCGAATTTTGTGG...AAAGCAATGGACCACTTGTGTCCCAGCAAACCCAGCTTTGCATTTATCCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTCAAAGTTACAGGGGTaGGAAGAGATAAATTCATCC +
Preference number: 5 (lower is better)
Translates to: VLLTKGTHLAAELCILSMSKLQG*EEINSS
Trigger: GGATGAATTTATCTCTTCCAACCCCTGTAACTTTGA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGCCTGAAATGTGTAATTaGATTTTCCAGCAGAACTCG +
Preference number: 5 (lower is better)
Translates to: VLLTKGTHLAAELCILSMPEMCN*IFQQNS
Trigger: CGAGTTCTGCTGGAAAATCAAATTACACATTTCAGG...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGGTGGTGCTCCTCGTTTaGTTGCAGTACTTCGATGAC +
Preference number: 5 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRVVLLV*LQYFDD
Trigger: GTCATCGAAGTACTGCAACAAAACGAGGAGCACCAC...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp GTTCTGCTAACAAAAGGGACACACCTAGCAGCTGAACTATGTATTCTTTCCATGTGCTGCAAAGTTTTGTaGATTGAGCTTTGGCATCAA +
Preference number: 5 (lower is better)
Translates to: VLLTKGTHLAAELCILSMCCKVL*IELWHQ
Trigger: TTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCA...CATGGAAAGAATACATAGTTCAGCTGCTAGGTGTGTCCCTTTTGTTAGCAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAATATACATCTCCTCATaGACCTTATCACGAAGGACA +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGIYISS*TLSRRT
Trigger: TGTCCTTCGTGATAAGGTCAATGAGGAGATGTATAT...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGAGGCATTATACAGGAGTaGATGTTCAAACTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGGIIQE*MFKLLD
Trigger: ATCAAGAAGTTTGAACATCAACTCCTGTATAATGCC...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGCACCCTCCACCTCCATaGTGCAGTATACAATTCGAT +
Preference number: 5 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRHPPPP*CSIQFD
Trigger: ATCGAATTGTATACTGCACAATGGAGGTGGAGGGTG...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp CAATTCTTAAGTGTTTCTCCCTCGATGCATAACAATGAACTCATTACCACTGGTTTTAGAAGCCTCTGCTaGATCTGTCTGAAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: QFLSVSPSMHNNELITTGFRSLC*ICLKFL
Trigger: GAGAAACTTCAGACAGATCAAGCAGAGGCTTCTAAA...ACCAGTGGTAATGAGTTCATTGTTATGCATCGAGGGAGAAACACTTAAGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGTTTGTGCCACTCAGATaGTTTGGGGCTATTTGGGGT +
Preference number: 5 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRFVPLR*FGAIWG
Trigger: ACCCCAAATAGCCCCAAACAATCTGAGTGGCACAAA...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AACAGACTAAAGACATGCATTGATTACAGGACTCCATCCCAATGGACTCTTGGACCACAAAATTCGATCTaGTTCATCATCACTTGCAAA +
Preference number: 5 (lower is better)
Translates to: NRLKTCIDYRTPSQWTLGPQNSI*FIITCK
Trigger: TTTGCAAGTGATGATGAACAAGATCGAATTTTGTGG...TCCAAGAGTCCATTGGGATGGAGTCCTGTAATCAATGCATGTCTTTAGTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGGTTCAGCAAGACGGATaGTGTCTTCGAGCTTTTTGG +
Preference number: 5 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRVQQDG*CLRAFW
Trigger: CCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAAC...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTTCATCAGCTACGATTaGGGTCTCCCCATTGAGAAA +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTFISYD*GLPIEK
Trigger: TTTCTCAATGGGGAGACCCAAATCGTAGCTGATGAA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTAGAGTGCTTCATGTTTaGAGGCTTATCCATTCGGAC +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTRVLHV*RLIHSD
Trigger: GTCCGAATGGATAAGCCTCAAAACATGAAGCACTCT...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGAGAGTGCTTCATGTTTaGAGGCTTATCCATTCGGAC +
Preference number: 5 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRRVLHV*RLIHSD
Trigger: GTCCGAATGGATAAGCCTCAAAACATGAAGCACTCT...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp GCATCAACCATAACATTAAACATGGTGCATATTGACTGTGGGACTCGAAAATCTTCAAAGTTACAGGGGTaGGAAGAGATAAATTCATCC +
Preference number: 5 (lower is better)
Translates to: ASTITLNMVHIDCGTRKSSKLQG*EEINSS
Trigger: GGATGAATTTATCTCTTCCAACCCCTGTAACTTTGA...AGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGTTATGGTTGATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTGGTAGATTTGGTACTTaGGGTAGGTTCACATTGGGT +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTGRFGT*GRFTLG
Trigger: ACCCAATGTGAACCTACCCAAAGTACCAAATCTACC...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTACTCAATCATGTCACTaGCCATCAGTTTTAGCCGCT +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTTQSCH*PSVLAA
Trigger: AGCGGCTAAAACTGATGGCAAGTGACATGATTGAGT...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGACTCAATCATGTCACTaGCCATCAGTTTTAGCCGCT +
Preference number: 5 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRTQSCH*PSVLAA
Trigger: AGCGGCTAAAACTGATGGCAAGTGACATGATTGAGT...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGTTGGAGACTGTCATTTaGTGCCACTCAGATTGTTTG +
Preference number: 5 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRLETVI*CHSDCL
Trigger: CAAACAATCTGAGTGGCACAAAATGACAGTCTCCAA...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTTGGAGACTGTCATTTaGTGCCACTCAGATTGTTTG +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTLETVI*CHSDCL
Trigger: CAAACAATCTGAGTGGCACAAAATGACAGTCTCCAA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTTACGGATGACAGTTTaGACCTCTTCTTGTGGTACT +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTLRMTV*TSSCGT
Trigger: AGTACCACAAGAAGAGGTCAAAACTGTCATCCGTAA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTTGGGTAGGTTCACATaGGGTAGGTTACTGGTTAAA +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTLGRFT*GRLLVK
Trigger: TTTAACCAGTAACCTACCCAATGTGAACCTACCCAA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTCCATGCTGCAAAGTTTaGTTGATTGAGCTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTPCCKV*LIELWH
Trigger: ATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGG...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGCCATGCTGCAAAGTTTaGTTGATTGAGCTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRPCCKV*LIELWH
Trigger: ATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGG...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGTCAAAGTTACAGGGGTaGGAAGAGATAAATTCATCC +
Preference number: 5 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRSKLQG*EEINSS
Trigger: GGATGAATTTATCTCTTCCAACCCCTGTAACTTTGA...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTCCTGAAATGTGTAATTaGATTTTCCAGCAGAACTCG +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTPEMCN*IFQQNS
Trigger: CGAGTTCTGCTGGAAAATCAAATTACACATTTCAGG...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS-3UTR CAA 90 bp TTGAATAATTATTTATTGAGGAGCCACAGTTTCCCACACTTTTACAACTGTAGGTGCTGCAAAGTTTTGTaGATTGAGCTTTGGCATCAA +
Preference number: 5 (lower is better)
Translates to: LNNYLLRSHSFPHFYNCRCCKVL*IELWHQ
Trigger: TTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCA...CCTACAGTTGTAAAAGTGTGGGAAACTGTGGCTCCTCAATAAATAATTATTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTTGCTGCAAAGTTTTGTaGATTGAGCTTTGGCATCAA +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTCCKVL*IELWHQ
Trigger: TTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCA...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS-3UTR CAA 90 bp AATTACCTAATGGGGTTAACTAACAGACTAAAGACATGCATTGATTACAGGACTATATACATCTCCTCATaGACCTTATCACGAAGGACA +
Preference number: 5 (lower is better)
Translates to: NYLMGLTNRLKTCIDYRTIYISS*TLSRRT
Trigger: TGTCCTTCGTGATAAGGTCAATGAGGAGATGTATAT...AGTCCTGTAATCAATGCATGTCTTTAGTCTGTTAGTTAACCCCATTAGGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS CCA 72 bp TCCCGGCGCTGCCTGCCGAGCCCTCGCTGGTGCGGCTaGGAGACAGGCGCGCTCCAGACGCGGCCGAGCCCA +
Preference number: 6 (lower is better)
Translates to: SRRCLPSPRWCG*ETGALQTRPSP
Trigger: TGGGCTCGGCCGCGTCTGGAGCGCGCCTGTCTCCCAGCCGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CCA 72 bp GGCACATTTCCGCCCTTGGCGTTGAGCTTCTGCACCTaGGTAGGGGGAACAGGTTTGTGCGACTGGCCAGTG +
Preference number: 6 (lower is better)
Translates to: GTFPPLALSFCT*VGGTGLCDWPV
Trigger: CACTGGCCAGTCGCACAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAAATGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CAA 90 bp CGCACCCTCTTCTCGATGTGTTTCTTGAAGACCTCCCGAGAGTCATaGGCTGAGCAGCCCCCACTCTGCACCATGCGGGCCACACGGTCA +
Preference number: 6 (lower is better)
Translates to: RTLFSMCFLKTSRES*AEQPPLCTMRATRS
Trigger: TGACCGTGTGGCCCGCATGGTGCAGAGTGGGGGCTGCTCAGCCAATGACTCTCGGGAGGTCTTCAAGAAACACATCGAGAAGAGGGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CAA 72 bp GCGTTGAGCTTCTGCACCTGGGTAGGGGGAACAGGTTaGTGCGACTGGCCAGTGGCCCTGTACATAGCTTGG +
Preference number: 6 (lower is better)
Translates to: ALSFCTWVGGTG*CDWPVALYIAW
Trigger: CCAAGCTATGTACAGGGCCACTGGCCAGTCGCACAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CAA 90 bp CCGTCAATCTCAGGTAGGCTGCGCACCCTCTTCTCGATGTGTTTCTaGAAGACCTCCCGAGAGTCATTGGCTGAGCAGCCCCCACTCTGC +
Preference number: 6 (lower is better)
Translates to: PSISGRLRTLFSMCF*KTSRESLAEQPPLC
Trigger: GCAGAGTGGGGGCTGCTCAGCCAATGACTCTCGGGAGGTCTTCAAGAAACACATCGAGAAGAGGGTGCGCAGCCTACCTGAGATTGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS TCA 72 bp CAGGTAGGCTGCGCACCCTCTTCTCGATGTGTTTCTTaGAGACCTCCCGAGAGTCATTGGCTGAGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: QVGCAPSSRCVS*RPPESHWLSSP
Trigger: GGGGCTGCTCAGCCAATGACTCTCGGGAGGTCTTCAAGAAACACATCGAGAAGAGGGTGCGCAGCCTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CCA 72 bp AAGCTGCACTGGCTGTCATCCGGGCTTGCTGCTTCCTaGGGTCCTCCTCACCACGGTAGATGGCATCAAACT +
Preference number: 6 (lower is better)
Translates to: KLHWLSSGLAAS*GPPHHGRWHQT
Trigger: AGTTTGATGCCATCTACCGTGGTGAGGAGGACCCCAGGAAGCAGCAAGCCCGGATGACAGCCAGTGCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CCA 72 bp TTCTGCACCTGGGTAGGGGGAACAGGTTTGTGCGACTaGCCAGTGGCCCTGTACATAGCTTGGACCCACAAA +
Preference number: 6 (lower is better)
Translates to: FCTWVGGTGLCD*PVALYIAWTHK
Trigger: TTTGTGGGTCCAAGCTATGTACAGGGCCACTGGCCAGTCGCACAAACCTGTTCCCCCTACCCAGGTGCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CAA 72 bp TCAGGTAGGCTGCGCACCCTCTTCTCGATGTGTTTCTaGAAGACCTCCCGAGAGTCATTGGCTGAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: SGRLRTLFSMCF*KTSRESLAEQP
Trigger: GGGCTGCTCAGCCAATGACTCTCGGGAGGTCTTCAAGAAACACATCGAGAAGAGGGTGCGCAGCCTACCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CAA 72 bp AATCAACTCAGAAGCTGCACTGGCTGTCATCCGGGCTaGCTGCTTCCTGGGGTCCTCCTCACCACGGTAGAT +
Preference number: 6 (lower is better)
Translates to: NQLRSCTGCHPG*LLPGVLLTTVD
Trigger: ATCTACCGTGGTGAGGAGGACCCCAGGAAGCAGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGTTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CAA 72 bp AACAGCTGGCAGCGCATGGGTTGTGGAGAAGTCGCCTaGAGTGCCCCAGGTTGGTTTAGAAGCCTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: NSWQRMGCGEVA*SAPGWFRSLCL
Trigger: CAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAAGGCGACTTCTCCACAACCCATGCGCTGCCAGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS TCA 72 bp GATCTGCCATTTGGAGACGTCCATCCAGCTCTCGTCTaGTCTGGGCTGCCTGCTCATCTGGATTGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: DLPFGDVHPALV*SGLPAHLDCPA
Trigger: AGCTGGACAATCCAGATGAGCAGGCAGCCCAGATCAGACGAGAGCTGGATGGACGTCTCCAAATGGCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CCA 72 bp TGCCACTCAGATTGTTTGGGGCTATTTGGGGTGGGATaGAGGATCACCCGCCCGAGTTCCTTGTCTTCCAAG +
Preference number: 6 (lower is better)
Translates to: CHSDCLGLFGVG*RITRPSSLSSK
Trigger: CTTGGAAGACAAGGAACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CAA 72 bp TCAAACTTGGCCATCCAAGAGCTTAGCACTGTCTCCTaGCTGAGGCCGTCAATCTCAGGTAGGCTGCGCACC +
Preference number: 6 (lower is better)
Translates to: SNLAIQELSTVS*LRPSISGRLRT
Trigger: GGTGCGCAGCCTACCTGAGATTGACGGCCTCAGCAAGGAGACAGTGCTAAGCTCTTGGATGGCCAAGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CAA 90 bp TGTAGCTTGAACTCTCCACCCTTGGACACCGGCATGCTCTCCAAGTaGGCCATGAGCAGGTTGACGGAGGACTTCAGCTCCTCAATGTAC +
Preference number: 6 (lower is better)
Translates to: CSLNSPPLDTGMLSK*AMSRLTEDFSSSMY
Trigger: GTACATTGAGGAGCTGAAGTCCTCCGTCAACCTGCTCATGGCCAACTTGGAGAGCATGCCGGTGTCCAAGGGTGGAGAGTTCAAGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS TCA 72 bp TTCAGTCCAGAAAATTGTGAGATGGGGGCATCCAGCTaGGGCACATTTCCGCCCTTGGCGTTGAGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: FSPENCEMGASS*GTFPPLALSFC
Trigger: GCAGAAGCTCAACGCCAAGGGCGGAAATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTCTGGACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112658.8
CDS TCA 72 bp CTGAGCTCTATCTGCGTCCTTCAGTCCAGAAAATTGTaGGATGGGGGCATCCAGCTGAGGCACATTTCCGCC +
Preference number: 6 (lower is better)
Translates to: LSSICVLQSRKL*DGGIQLRHISA
Trigger: GGCGGAAATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTCTGGACTGAAGGACGCAGATAGAGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112658.8
CDS GCA 72 bp GTCGCCTTGAGTGCCCCAGGTTGGTTTAGAAGCCTCTaGTTGATCTGTCTGAAGTTTCTCTCCACCCTCCAC +
Preference number: 6 (lower is better)
Translates to: VALSAPGWFRSL*LICLKFLSTLH
Trigger: GTGGAGGGTGGAGAGAAACTTCAGACAGATCAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAAGGCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CCA 72 bp CTCTATCTGCGTCCTTCAGTCCAGAAAATTGTGAGATaGGGGCATCCAGCTGAGGCACATTTCCGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: LYLRPSVQKIVR*GHPAEAHFRPW
Trigger: CCAAGGGCGGAAATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTCTGGACTGAAGGACGCAGATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112658.8
CDS CAA 72 bp CTGCGTTTCAGTTTCTGTAGCTTGAACTCTCCACCCTaGGACACCGGCATGCTCTCCAAGTTGGCCATGAGC +
Preference number: 6 (lower is better)
Translates to: LRFSFCSLNSPP*DTGMLSKLAMS
Trigger: GCTCATGGCCAACTTGGAGAGCATGCCGGTGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGAAACGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS GCA 72 bp ATGTCCACTGCAAAGAGTGACAGGAACGTCTCCGCATaGTCCACCATTAAGTCTGACCACCACGCAAAGGCT +
Preference number: 6 (lower is better)
Translates to: MSTAKSDRNVSA*STIKSDHHAKA
Trigger: AGCCTTTGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS CCA 72 bp CATGCTTCTGAGCTCTATCTGCGTAAAATTGTGAGATaGGGGCATCCAGCTGAGGCACATTTCCGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: HASELYLRKIVR*GHPAEAHFRPW
Trigger: CCAAGGGCGGAAATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTACGCAGATAGAGCTCAGAAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000067491.14
ENSMUST00000224882.2
CDS CAA 90 bp CCACCCTTGGACACCGGCATGCTCTCCAAGTTGGCCATGAGCAGGTaGACGGAGGACTTCAGCTCCTCAATGTACATGTTTTCCATTTCT +
Preference number: 6 (lower is better)
Translates to: PPLDTGMLSKLAMSR*TEDFSSSMYMFSIS
Trigger: AGAAATGGAAAACATGTACATTGAGGAGCTGAAGTCCTCCGTCAACCTGCTCATGGCCAACTTGGAGAGCATGCCGGTGTCCAAGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS TCA 72 bp GATCACCACCTCCAAGGAGAAGGACAGCAGGACATCTaGCTTAGAAAGCTGGTTCTCACTCTCCTCACCCAT +
Preference number: 6 (lower is better)
Translates to: DHHLQGEGQQDI*LRKLVLTLLTH
Trigger: ATGGGTGAGGAGAGTGAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTCCTTCTCCTTGGAGGTGGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS TCA 72 bp TCATTTACACAAAATTGTGAGATGGGGGCATCCAGCTaGGGCACATTTCCGCCCTTGGCGTTGAGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: SFTQNCEMGASS*GTFPPLALSFC
Trigger: GCAGAAGCTCAACGCCAAGGGCGGAAATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTGTGTAAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112657.9
CDS GCA 72 bp TCAACATGTGGCTCGGCGTGGTGCTCCTCGTTTTGTTaGAGTACTTCGATGACTAGTTCAGCAAGACGGATT +
Preference number: 6 (lower is better)
Translates to: STCGSAWCSSFC*STSMTSSARRI
Trigger: AATCCGTCTTGCTGAACTAGTCATCGAAGTACTGCAACAAAACGAGGAGCACCACGCCGAGCCACATGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS CCA 72 bp GCAAAGGCTTCTCCTTTATCAACATGTGGCTCGGCGTaGTGCTCCTCGTTTTGTTGCAGTACTTCGATGACT +
Preference number: 6 (lower is better)
Translates to: AKASPLSTCGSA*CSSFCCSTSMT
Trigger: AGTCATCGAAGTACTGCAACAAAACGAGGAGCACCACGCCGAGCCACATGTTGATAAAGGAGAAGCCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS TCA 72 bp TTTCTCGATAGCTGCACATGGCAAAAGTGTACTGGCTaGCCTGCACCAACACAAAGAACCTCTTCTTCCACC +
Preference number: 6 (lower is better)
Translates to: FLDSCTWQKCTG*PAPTQRTSSST
Trigger: GGTGGAAGAAGAGGTTCTTTGTGTTGGTGCAGGTCAGCCAGTACACTTTTGCCATGTGCAGCTATCGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS TCA 72 bp TCCAGAACAAATCTTCTGATGTACCTGATCCATTATTaGCTGGCTCCCATGACTCCCGCTCAAAGCCCCTGT +
Preference number: 6 (lower is better)
Translates to: SRTNLLMYLIHY*LAPMTPAQSPC
Trigger: ACAGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAATAATGGATCAGGTACATCAGAAGATTTGTTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224581.2
CDS GCA 72 bp AAGGCTTCTCCTTTATCAACATGTGGCTCGGCGTGGTaGTCCTCGTTTTGTTGCAGTACTTCGATGACTAGT +
Preference number: 6 (lower is better)
Translates to: KASPLSTCGSAW*SSFCCSTSMTS
Trigger: ACTAGTCATCGAAGTACTGCAACAAAACGAGGAGCACCACGCCGAGCCACATGTTGATAAAGGAGAAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
CDS CAA 72 bp ACTAGTTCAGCAAGACGGATTGTGTCTTCGAGCTTTTaGGCGGGAGTGATTAAGCGGCCTACATTTTCCGCT +
Preference number: 6 (lower is better)
Translates to: TSSARRIVSSSF*AGVIKRPTFSA
Trigger: AGCGGAAAATGTAGGCCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAACTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177814.2
CDS CAA 72 bp TTCCAGAACAAATCTTCTGATGTACCTGATCCATTATaGACTGGCTCCCATGACTCCCGCTCAAAGCCCCTG +
Preference number: 6 (lower is better)
Translates to: FQNKSSDVPDPL*TGSHDSRSKPL
Trigger: CAGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAATAATGGATCAGGTACATCAGAAGATTTGTTCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224581.2
CDS CAA 90 bp ACAGCATTCATAAAGGCTTCATCAGCTACGATTTGGGTCTCCCCATaGAGAAAAGCCTGGAACCGGTCTTTGACAGTCTGTAGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: TAFIKASSATIWVSP*RKAWNRSLTVCSCC
Trigger: ACAGCAGCTACAGACTGTCAAAGACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAATCGTAGCTGATGAAGCCTTTATGAATGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS GCA 72 bp GAACTTAGGAAATTTGCGTTCCCTGGCTATTTGATCTaGCATTTGGAGACGTCCATCCAGCTCTCGTCTGAT +
Preference number: 6 (lower is better)
Translates to: ELRKFAFPGYLI*HLETSIQLSSD
Trigger: ATCAGACGAGAGCTGGATGGACGTCTCCAAATGGCAGATCAAATAGCCAGGGAACGCAAATTTCCTAAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CCA 72 bp AAAGTCAGCCGCTGCACCATCTCAAAGAGGGAAGCGTaGTCAAAGTTACAGGGGTTGGAAGAGATAAATTCA +
Preference number: 6 (lower is better)
Translates to: KVSRCTISKREA*SKLQGLEEINS
Trigger: TGAATTTATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTGCAGCGGCTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS TCA 72 bp TCACTCTCCTCACCCATGTCAATGATGGAAGCATTGTaGCTGCGTTTCAGTTTCTGTAGCTTGAACTCTCCA +
Preference number: 6 (lower is better)
Translates to: SLSSPMSMMEAL*LRFSFCSLNSP
Trigger: TGGAGAGTTCAAGCTACAGAAACTGAAACGCAGTCACAATGCTTCCATCATTGACATGGGTGAGGAGAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CAA 72 bp AGAGCAGCCTGCTCTAGGCATTTACGGATGACAGTTTaGACCTCTTCTTGTGGTACTGGAGTGACAATATCT +
Preference number: 6 (lower is better)
Translates to: RAACSRHLRMTV*TSSCGTGVTIS
Trigger: AGATATTGTCACTCCAGTACCACAAGAAGAGGTCAAAACTGTCATCCGTAAATGCCTAGAGCAGGCTGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224581.2
ENSMUST00000224882.2
CDS CAA 72 bp ACTAGTTCAGCAAGACGGATTGTGTCTTCGAGCTTTTaGGCGGGAGTGATTAAGCGGCCTACATTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: TSSARRIVSSSF*AGVIKRPTFSS
Trigger: TGAAGAAAATGTAGGCCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAACTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224581.2
CDS TCA 72 bp CAAGACGGATTGTGTCTTCGAGCTTTTTGGCGGGAGTaGTTAAGCGGCCTACATTTTGAATGGTTAAATCCA +
Preference number: 6 (lower is better)
Translates to: QDGLCLRAFWRE*LSGLHFEWLNP
Trigger: TGGATTTAACCATTCAAAATGTAGGCCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACACAATCCGTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067491.14
CDS GCA 72 bp CAAGAATGTTCTGAAACATCTCATAGAGCTGTTCCTTaGTCAGAATCAACTCAGAAGCTGCACTGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: QECSETSHRAVP*SESTQKLHWLS
Trigger: TGACAGCCAGTGCAGCTTCTGAGTTGATTCTGAGCAAGGAACAGCTCTATGAGATGTTTCAGAACATTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2
CDS CAA 72 bp ATCTGGATTGTCCAGCTGACAGGCATTATACAGGAGTaGATGTTCAAACTTCTTGATCCCAAGAATGTTCTG +
Preference number: 6 (lower is better)
Translates to: IWIVQLTGIIQE*MFKLLDPKNVL
Trigger: CAGAACATTCTTGGGATCAAGAAGTTTGAACATCAACTCCTGTATAATGCCTGTCAGCTGGACAATCCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067491.14
ENSMUST00000112657.9
ENSMUST00000112658.8
ENSMUST00000177814.2
ENSMUST00000224882.2