Pregenerated sensors for CADM4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054793Ensembl transcript IDs: ENSMUST00000068023.8
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCACCGTGCAAACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTaGAACTCTTACAATGGCTGGCATGGGGTCTGGGACCCCAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: PTVQTWLCKEVPRAL*NSYNGWHGVWDPKE Trigger: TTCTTTGGGGTCCCAGACCCCATGCCAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTTTGCACGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR CCA 90 bp | CTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCTaGCATGGGGTCTGGGACCCCAAAGAAATCTGTGTTTCCCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: LCKEVPRALWNSYNG*HGVWDPKEICVSLP Trigger: GGGAAGGGAAACACAGATTTCTTTGGGGTCCCAGACCCCATGCCAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR CCA 90 bp | ATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATaGCTGGCATGGGGTCTGGGACCCCAAAGAAATCTGTGTTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: MALQRGAQSSVELLQ*LAWGLGPQRNLCFP Trigger: AGGGAAACACAGATTTCTTTGGGGTCCCAGACCCCATGCCAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGAACCCCACCGTGCAAACATaGCTTTGCAAAGAGGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: GTGRTWGSRWREGEPPRNPTVQT*LCKEVP Trigger: GGGCACCTCTTTGCAAAGCCATGTTTGCACGGTGGG...GTTCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGAAACTCTTACAATGGCTaGCATGGGGTCTGGGACCCC | + |
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Preference number: 2 (lower is better) Translates to: MEREGRGGQDGGKGSRPGNSYNG*HGVWDP Trigger: GGGGTCCCAGACCCCATGCCAGCCATTGTAAGAGTT...TCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGAAGTGCCCAGAGCTCTGTaGAACTCTTACAATGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: WNGKDVGVKMEGRGAAQEVPRAL*NSYNGW Trigger: CCAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCAC...TTCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGAAGTGCAAACATGGCTTTaGAAAGAGGTGCCCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: WNGKDVGVKMEGRGAAQEVQTWL*KEVPRA Trigger: AGCTCTGGGCACCTCTTTGCAAAGCCATGTTTGCAC...TTCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR-3UTR GCA 90 bp | CGGAGTTTTCACACAAAGACACAGAATTCCCATTTCCACGCCCTCCCCTGCCCCTCTGGTCAATGTCTTTaGTGGCTCCTTGCAGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: RSFHTKTQNSHFHALPCPSGQCL*WLLAAG Trigger: GCCAGCTGCAAGGAGCCAGCAAAGACATTGACCAGA...GGGGCAGGGGAGGGCGTGGAAATGGGAATTCTGTGTCTTTGTGTGAAAACTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR-3UTR CCA 90 bp | CCATCGGAGTTTTCACACAAAGACACAGAATTCCCATTTCCACGCCCTCCCCTGCCTAGCCTTTGGCCCTaGGAGAGATCCAGGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: PSEFSHKDTEFPFPRPPLPSLWP*ERSRHP Trigger: TGGATGCCTGGATCTCTCCCAGGGCCAAAGGCTAGG...CAGGGGAGGGCGTGGAAATGGGAATTCTGTGTCTTTGTGTGAAAACTCCGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCAGTTTAATGGTGGTTAGTGGGATTGCCAAACCCCCTCCCTATCCCCTCGTGGAACTCTTACAATaGCTGGCATGGGGTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LLSLMVVSGIAKPPPYPLVELLQ*LAWGLG Trigger: TCCCAGACCCCATGCCAGCCATTGTAAGAGTTCCAC...GAGGGGATAGGGAGGGGGTTTGGCAATCCCACTAACCACCATTAAACTGAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR-3UTR GCA 90 bp | CCATCGGAGTTTTCACACAAAGACACAGAATTCCCATTTCCACGCCCTCCCCTGGGCTTTGCAAAGAGGTaGCCAGAGCTCTGTGGAACT | + |
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Preference number: 2 (lower is better) Translates to: PSEFSHKDTEFPFPRPPLGFAKR*PELCGT Trigger: AGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCC...CAGGGGAGGGCGTGGAAATGGGAATTCTGTGTCTTTGTGTGAAAACTCCGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR-3UTR CCA 90 bp | AACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCTGGGTCAATGTCTTTGCTaGCTCCTTGCAGCTGGCGGT | + |
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Preference number: 2 (lower is better) Translates to: NMALQRGAQSSVELLQWLGQCLC*LLAAGG Trigger: ACCGCCAGCTGCAAGGAGCCAGCAAAGACATTGACC...CAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR-3UTR CCA 90 bp | AACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCTGCTCCCCCACAAGACCTaGTTCTGTAGCCTAGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: NMALQRGAQSSVELLQWLLPHKT*FCSLGV Trigger: AACCCCTAGGCTACAGAACCAGGTCTTGTGGGGGAG...CAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR-3UTR CCA 90 bp | CAAACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCTCCCATCCCGGACTCTaGTCAATGTCTTTGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: QTWLCKEVPRALWNSYNGSHPGL*SMSLLA Trigger: AGCCAGCAAAGACATTGACCAGAGTCCGGGATGGGA...GCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGACGTGCAAACATGGCTTaGCAAAGAGGTGCCCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: MEREGRGGQDGGKGSRPGRANMA*QRGAQS Trigger: GCTCTGGGCACCTCTTTGCAAAGCCATGTTTGCACG...TCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR-3UTR CAA 90 bp | AACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCTGGTCTTTGCTGGCTCCTaGCAGCTGGCGGTGGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: NMALQRGAQSSVELLQWLVFAGS*QLAVGE Trigger: CTCCCCCACCGCCAGCTGCAAGGAGCCAGCAAAGAC...CAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR CCA 72 bp | GAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCTaGCATGGGGTCTGGGACCCCAAAGAAATCTGTGTT | + |
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Preference number: 3 (lower is better) Translates to: EVPRALWNSYNG*HGVWDPKEICV Trigger: AACACAGATTTCTTTGGGGTCCCAGACCCCATGCCAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR CCA 72 bp | CAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATaGCTGGCATGGGGTCTGGGACCCCAAAGAAATCTG | + |
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Preference number: 3 (lower is better) Translates to: QRGAQSSVELLQ*LAWGLGPQRNL Trigger: CAGATTTCTTTGGGGTCCCAGACCCCATGCCAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| 3UTR-3UTR CAA 90 bp | CCCATCGGAGTTTTCACACAAAGACACAGAATTCCCATTTCCACGCCCTCCCCTCTCTGGTCAATGTCTTaGCTGGCTCCTTGCAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: PIGVFTQRHRIPISTPSPLWSMS*LAPCSW Trigger: CCAGCTGCAAGGAGCCAGCAAAGACATTGACCAGAG...AGGGGAGGGCGTGGAAATGGGAATTCTGTGTCTTTGTGTGAAAACTCCGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR TCA 90 bp | ATGGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGAGCGGAACCAGGCAGCTaGGTTCCACCTCGCCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: MEREGRGGQDGGKGSRPGAEPGS*VPPRRP Trigger: AGGGCGGCGAGGTGGAACTCAGCTGCCTGGTTCCGC...TCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR GCA 90 bp | TGGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGAACTCGCCGCCCTCCACTaGTTGCTCTCGGACCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: WNGKDVGVKMEGRGAAQELAALH*LLSDLH Trigger: GTGGAGGTCCGAGAGCAAGCAGTGGAGGGCGGCGAG...TTCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR GCA 90 bp | ATGGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGACCAGTAGCGCCAGGATaGCGCCCACAATGGCGTAAG | + |
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Preference number: 4 (lower is better) Translates to: MEREGRGGQDGGKGSRPGPVAPG*RPQWRK Trigger: CTTACGCCATTGTGGGCGGCATCCTGGCGCTACTGG...TCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR GCA 90 bp | TGGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGAATACCACCGTCGTCCTTaGGATCCACACGGAACCGCA | + |
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Preference number: 4 (lower is better) Translates to: WNGKDVGVKMEGRGAAQEYHRRP*DPHGTA Trigger: TGCGGTTCCGTGTGGATCGCAAGGACGACGGTGGTA...TTCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR TCA 90 bp | ATGGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGAGGGCTGGGTTCTGAATaGCGACTATGGACCCATCGT | + |
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Preference number: 4 (lower is better) Translates to: MEREGRGGQDGGKGSRPGGLGSE*RLWTHR Trigger: ACGATGGGTCCATAGTCGTCATTCAGAACCCAGCCC...TCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR GCA 90 bp | GGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGAACCTCCTTTCAACTCCTTaGGATCCCGATACCAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: GTGRTWGSRWREGEPPRNLLSTP*DPDTSA Trigger: TGCGCTGGTATCGGGATCGCAAGGAGTTGAAAGGAG...GTTCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CCA 90 bp | TGGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGAAGAGGGTCTGCCGGGCTaGGTTCTGAATGACGACTAT | + |
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Preference number: 4 (lower is better) Translates to: WNGKDVGVKMEGRGAAQEEGLPG*VLNDDY Trigger: ATAGTCGTCATTCAGAACCCAGCCCGGCAGACCCTC...TTCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CCA 90 bp | TGGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGAAGGATGCCGCCCACAATaGCGTAAGGAACCGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: WNGKDVGVKMEGRGAAQEGCRPQ*RKEPMS Trigger: AGACATCGGTTCCTTACGCCATTGTGGGCGGCATCC...TTCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR TCA 90 bp | TGTTCTCTCCTCAGTTTAATGGTGGTTAGTGGGATTGCCAAACCCCCTCCCTATGGGCGTCTGAGAGCCTaGTGCGCACCCGGCGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: CSLLSLMVVSGIAKPPPYGRLRA*CAPGAG Trigger: CCCCGCGCCGGGTGCGCATCAGGCTCTCAGACGCCC...ATAGGGAGGGGGTTTGGCAATCCCACTAACCACCATTAAACTGAGGAGAGAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CCA 90 bp | TGGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGAAGAGAACTCCTCCAGCTaGAATCGCTCGTCCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: WNGKDVGVKMEGRGAAQEENSSS*NRSSFR Trigger: TCTGAAGGACGAGCGATTCCAGCTGGAGGAGTTCTC...TTCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR TCA 90 bp | AAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCTGGCATGGGGTCTGGGATGCAGACGGCAGGTaGTCTCAGCCACCCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: KEVPRALWNSYNGWHGVWDADGR*SQPPHP Trigger: AGGGTGGGGTGGCTGAGATCACCTGCCGTCTGCATC...CCAGACCCCATGCCAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR TCA 90 bp | CAAACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCCTCCAGGCGGGCGTCTaGGAGCCTGATGCGCACCCG | + |
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Preference number: 4 (lower is better) Translates to: QTWLCKEVPRALWNSYNGLQAGV*EPDAHP Trigger: CGGGTGCGCATCAGGCTCTCAGACGCCCGCCTGGAG...GCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR GCA 90 bp | CAAATCCTTATTACCCGTCCCAGGACTGGGGGTCTAGGAGGGTCCTTAAGTCCCCCGCCCTCCACTGCTTaGTCTCGGACCTCCACCACA | + |
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Preference number: 4 (lower is better) Translates to: QILITRPRTGGLGGSLSPPPSTA*SRTSTT Trigger: TGTGGTGGAGGTCCGAGAGCAAGCAGTGGAGGGCGG...GGGACTTAAGGACCCTCCTAGACCCCCAGTCCTGGGACGGGTAATAAGGATTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR GCA 90 bp | CTCCTCAGTTTAATGGTGGTTAGTGGGATTGCCAAACCCCCTCCCTATCCCCTCCACGGAACCGCACGGTaGTTGCCACGCTCCACACCT | + |
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Preference number: 4 (lower is better) Translates to: LLSLMVVSGIAKPPPYPLHGTAR*LPRSTP Trigger: AGGTGTGGAGCGTGGCAAGCACCGTGCGGTTCCGTG...GAGGGGATAGGGAGGGGGTTTGGCAATCCCACTAACCACCATTAAACTGAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR GCA 90 bp | AAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCTGGCATGGGGTCTGGAGCACGTACTGCGTCTaGTTGCTGTGTCCCGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: KEVPRALWNSYNGWHGVWSTYCV*LLCPEG Trigger: GCCCTCGGGACACAGCAAGCAGACGCAGTACGTGCT...CCAGACCCCATGCCAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR TCA 90 bp | CGGAGTTTTCACACAAAGACACAGAATTCCCATTTCCACGCCCTCCCCTGCCCCTGCCGGGCTGGGTTCTaGATGACGACTATGGACCCA | + |
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Preference number: 4 (lower is better) Translates to: RSFHTKTQNSHFHALPCPCRAGF*MTTMDP Trigger: TGGGTCCATAGTCGTCATTCAGAACCCAGCCCGGCA...GGGGCAGGGGAGGGCGTGGAAATGGGAATTCTGTGTCTTTGTGTGAAAACTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR GCA 90 bp | AAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCTGGCATGGGGTCTGGTCTCTGGCTTCTCCCTaGTCATCCAAGCCACTGGCC | + |
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Preference number: 4 (lower is better) Translates to: KEVPRALWNSYNGWHGVWSLASP*SSKPLA Trigger: GGCCAGTGGCTTGGATGAGCAGGGAGAAGCCAGAGA...CCAGACCCCATGCCAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CCA 90 bp | CTCCTCAGTTTAATGGTGGTTAGTGGGATTGCCAAACCCCCTCCCTATCCCCTCCGGTTCCAGCGGATCTaGTTTGGCCTGGGGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LLSLMVVSGIAKPPPYPLRFQRI*FGLGFP Trigger: AGGGAACCCCAGGCCAAACCAGATCCGCTGGAACCG...GAGGGGATAGGGAGGGGGTTTGGCAATCCCACTAACCACCATTAAACTGAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR TCA 90 bp | AACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCTGGTGAGCGTGGCGATCTaGTGGTGGGTGTCCTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: NMALQRGAQSSVELLQWLVSVAI*WWVSSV Trigger: CACGGAGGACACCCACCATCAGATCGCCACGCTCAC...CAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CCA 90 bp | AACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCTGCCCGAGGGCAGCGCCTaGTTCTGTGCTTCGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: NMALQRGAQSSVELLQWLPEGSA*FCASQM Trigger: CATCTGCGAAGCACAGAACCAGGCGCTGCCCTCGGG...CAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR TCA 90 bp | CCCATCGGAGTTTTCACACAAAGACACAGAATTCCCATTTCCACGCCCTCCCCTGTCCATCGCCGCCATTaGGGAAGGCTTCTCTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: PIGVFTQRHRIPISTPSPVHRRH*GRLLWL Trigger: AAGCCAGAGAAGCCTTCCTCAATGGCGGCGATGGAC...AGGGGAGGGCGTGGAAATGGGAATTCTGTGTCTTTGTGTGAAAACTCCGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CCA 90 bp | CAAACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCCCAGCGGATCTGGTTTaGCCTGGGGTTCCCTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: QTWLCKEVPRALWNSYNGPADLV*PGVPCD Trigger: GTCACAGGGAACCCCAGGCCAAACCAGATCCGCTGG...GCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CCA 90 bp | TGCAAACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGCGCCTCCGCCCTCTCTaGCAGAGACTCATTCCCACG | + |
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Preference number: 4 (lower is better) Translates to: CKHGFAKRCPELCGTLTMRLRPL*QRLIPT Trigger: CGTGGGAATGAGTCTCTGCCAGAGAGGGCGGAGGCG...CATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CCA 90 bp | CTCCTCAGTTTAATGGTGGTTAGTGGGATTGCCAAACCCCCTCCCTATCCCCTCGCTCATCCAAGCCACTaGCCTCATGGGTCAGATAGG | + |
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Preference number: 4 (lower is better) Translates to: LLSLMVVSGIAKPPPYPLAHPSH*PHGSDR Trigger: CCTATCTGACCCATGAGGCCAGTGGCTTGGATGAGC...GAGGGGATAGGGAGGGGGTTTGGCAATCCCACTAACCACCATTAAACTGAGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR TCA 90 bp | TGTTCTCTCCTCAGTTTAATGGTGGTTAGTGGGATTGCCAAACCCCCTCCCTATGAGCTCTGGTGCCATTaGAAAAGAGGGTCTGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: CSLLSLMVVSGIAKPPPYELWCH*KRGSAG Trigger: CCCGGCAGACCCTCTTTTTCAATGGCACCAGAGCTC...ATAGGGAGGGGGTTTGGCAATCCCACTAACCACCATTAAACTGAGGAGAGAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR GCA 90 bp | TGCAAACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGACATCCAGCACGTACTaGGTCTGCTTGCTGTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: CKHGFAKRCPELCGTLTMTSSTY*VCLLCP Trigger: GGGACACAGCAAGCAGACGCAGTACGTGCTGGATGT...CATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR TCA 90 bp | TGCAAACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGTCTGTGCTTCGCAGATaGCAATACCACCGTCGTCCT | + |
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Preference number: 4 (lower is better) Translates to: CKHGFAKRCPELCGTLTMSVLRR*QYHRRP Trigger: AGGACGACGGTGGTATTGTCATCTGCGAAGCACAGA...CATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR TCA 90 bp | CCCATCGGAGTTTTCACACAAAGACACAGAATTCCCATTTCCACGCCCTCCCCTCCACTAGCACACATATaGTCAGAAACACCAGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PIGVFTQRHRIPISTPSPPLAHI*SETPVA Trigger: CGCTACTGGTGTTTCTGATCATATGTGTGCTAGTGG...AGGGGAGGGCGTGGAAATGGGAATTCTGTGTCTTTGTGTGAAAACTCCGATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS TCA 90 bp | ACCAGCGCAGGACCGCTGCGGGGCGCGACCGCGGAACCAGGCAGCTaGGTTCCACCTCGCCGCCCTCCACTGCTTGCTCTCGGACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSAGPLRGATAEPGS*VPPRRPPLLALGPP Trigger: TGGAGGTCCGAGAGCAAGCAGTGGAGGGCGGCGAGGTGGAACTCAGCTGCCTGGTTCCGCGGTCGCGCCCCGCAGCGGTCCTGCGCTGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 90 bp | CACTCCTTTCAACTCCTTGCGATCCCGATACCAGCGCAGGACCGCTaGGGGGCGCGACCGCGGAACCAGGCAGCTGAGTTCCACCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSFQLLAIPIPAQDR*GARPRNQAAEFHLA Trigger: GGCGAGGTGGAACTCAGCTGCCTGGTTCCGCGGTCGCGCCCCGCAGCGGTCCTGCGCTGGTATCGGGATCGCAAGGAGTTGAAAGGAGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CAA 90 bp | ATGGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGAGGAACCGCACGGTGCTaGCCACGCTCCACACCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: MEREGRGGQDGGKGSRPGGTARC*PRSTPC Trigger: GCAAGGTGTGGAGCGTGGCAAGCACCGTGCGGTTCC...TCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCCAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS TCA 90 bp | CGCAGGTGTAGGTGCCGTTATCTGCAGATACCAGGCCAGGTAGCGTaGGCGTCTCGCCCACCGCCTCCGCCCTCTCTGGCAGAGACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RRCRCRYLQIPGQVA*ASRPPPPPSLAETH Trigger: ATGAGTCTCTGCCAGAGAGGGCGGAGGCGGTGGGCGAGACGCTCACGCTACCTGGCCTGGTATCTGCAGATAACGGCACCTACACCTGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 90 bp | CGCGGAACCAGGCAGCTGAGTTCCACCTCGCCGCCCTCCACTGCTTaGTCTCGGACCTCCACCACAGGATTCTCCGGAGCCACTAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: RGTRQLSSTSPPSTA*SRTSTTGFSGATKT Trigger: TGTCTTAGTGGCTCCGGAGAATCCTGTGGTGGAGGTCCGAGAGCAAGCAGTGGAGGGCGGCGAGGTGGAACTCAGCTGCCTGGTTCCGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 90 bp | AATACCACCGTCGTCCTTGCGATCCACACGGAACCGCACGGTGCTTaGCACGCTCCACACCTTGCCGTTCTCCTGGCCGCTGCTCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: NTTVVLAIHTEPHGA*HAPHLAVLLAAAHS Trigger: GGAGTGAGCAGCGGCCAGGAGAACGGCAAGGTGTGGAGCGTGGCAAGCACCGTGCGGTTCCGTGTGGATCGCAAGGACGACGGTGGTATT 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 90 bp | GCGTGGATCCGCGCTGTGGGGGAATACTGCACATCCAGCACGTACTaGGTCTGCTTGCTGTGTCCCGAGGGCAGCGCCTGGTTCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AWIRAVGEYCTSSTY*VCLLCPEGSAWFCA Trigger: AGCACAGAACCAGGCGCTGCCCTCGGGACACAGCAAGCAGACGCAGTACGTGCTGGATGTGCAGTATTCCCCCACAGCGCGGATCCACGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS TCA 90 bp | GCTTGCTGTGTCCCGAGGGCAGCGCCTGGTTCTGTGCTTCGCAGATaGCAATACCACCGTCGTCCTTGCGATCCACACGGAACCGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: ACCVPRAAPGSVLRR*QYHRRPCDPHGTAR Trigger: CCGTGCGGTTCCGTGTGGATCGCAAGGACGACGGTGGTATTGTCATCTGCGAAGCACAGAACCAGGCGCTGCCCTCGGGACACAGCAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 90 bp | ATCCGCGCTGTGGGGGAATACTGCACATCCAGCACGTACTGCGTCTaGTTGCTGTGTCCCGAGGGCAGCGCCTGGTTCTGTGCTTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IRAVGEYCTSSTYCV*LLCPEGSAWFCASQ Trigger: CTGCGAAGCACAGAACCAGGCGCTGCCCTCGGGACACAGCAAGCAGACGCAGTACGTGCTGGATGTGCAGTATTCCCCCACAGCGCGGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CAA 90 bp | TGGAACGGGAAGGACGTGGGGGTCAAGATGGAGGGAAGGGGAGCCGCCCAGGAATGTCCATCGCCGCCATaGAGGAAGGCTTCTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WNGKDVGVKMEGRGAAQECPSPP*RKASLA Trigger: AGCCAGAGAAGCCTTCCTCAATGGCGGCGATGGACA...TTCCTGGGCGGCTCCCCTTCCCTCCATCTTGACCCCCACGTCCTTCCCGTTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 90 bp | TGCGATCCACACGGAACCGCACGGTGCTTGCCACGCTCCACACCTTaGCGTTCTCCTGGCCGCTGCTCACTCCTTTCAACTCCTTGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: CDPHGTARCLPRSTP*RSPGRCSLLSTPCD Trigger: ATCGCAAGGAGTTGAAAGGAGTGAGCAGCGGCCAGGAGAACGGCAAGGTGTGGAGCGTGGCAAGCACCGTGCGGTTCCGTGTGGATCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 90 bp | GTACTGCGTCTGCTTGCTGTGTCCCGAGGGCAGCGCCTGGTTCTGTaGTTCGCAGATGACAATACCACCGTCGTCCTTGCGATCCACACG | + |
|
Preference number: 5 (lower is better) Translates to: VLRLLAVSRGQRLVL*FADDNTTVVLAIHT Trigger: CGTGTGGATCGCAAGGACGACGGTGGTATTGTCATCTGCGAAGCACAGAACCAGGCGCTGCCCTCGGGACACAGCAAGCAGACGCAGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CCA 90 bp | TCTGAGAGCCTGATGCGCACCCGGCGCGGGGAGAACTCCTCCAGCTaGAATCGCTCGTCCTTCAGAGCTCTGGTGCCATTGAAAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SESLMRTRRGENSSS*NRSSFRALVPLKKR Trigger: CCTCTTTTTCAATGGCACCAGAGCTCTGAAGGACGAGCGATTCCAGCTGGAGGAGTTCTCCCCGCGCCGGGTGCGCATCAGGCTCTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CCA 90 bp | TCCAGCACGTACTGCGTCTGCTTGCTGTGTCCCGAGGGCAGCGCCTaGTTCTGTGCTTCGCAGATGACAATACCACCGTCGTCCTTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSTYCVCLLCPEGSA*FCASQMTIPPSSLR Trigger: TCGCAAGGACGACGGTGGTATTGTCATCTGCGAAGCACAGAACCAGGCGCTGCCCTCGGGACACAGCAAGCAGACGCAGTACGTGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CAA 90 bp | CTCCTCAGTTTAATGGTGGTTAGTGGGATTGCCAAACCCCCTCCCTATCCCCTCGCCGCCCTCCACTGCTaGCTCTCGGACCTCCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLSLMVVSGIAKPPPYPLAALHC*LSDLHH Trigger: GTGGTGGAGGTCCGAGAGCAAGCAGTGGAGGGCGGC...GAGGGGATAGGGAGGGGGTTTGGCAATCCCACTAACCACCATTAAACTGAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CAA 90 bp | AAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCTGGCATGGGGTCTGGACGTACTGCGTCTGCTaGCTGTGTCCCGAGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KEVPRALWNSYNGWHGVWTYCVC*LCPEGS Trigger: GCTGCCCTCGGGACACAGCAAGCAGACGCAGTACGT...CCAGACCCCATGCCAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS TCA 90 bp | CCTTCTGTCGGACGGAGCACCAGACCATGCCCACTAGCACACATATaGTCAGAAACACCAGTAGCGCCAGGATGCCGCCCACAATGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PSVGRSTRPCPLAHI*SETPVAPGCRPQWR Trigger: ACGCCATTGTGGGCGGCATCCTGGCGCTACTGGTGTTTCTGATCATATGTGTGCTAGTGGGCATGGTCTGGTGCTCCGTCCGACAGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CAA 90 bp | TGCAAACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCCACGCTCCACACCTaGCCGTTCTCCTGGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CKHGFAKRCPELCGTLTMATLHT*PFSWPL Trigger: CAGCGGCCAGGAGAACGGCAAGGTGTGGAGCGTGGC...CATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CCA 90 bp | GTCCTTCAGAGCTCTGGTGCCATTGAAAAAGAGGGTCTGCCGGGCTaGGTTCTGAATGACGACTATGGACCCATCGTACTGATGCAGACG | + |
|
Preference number: 5 (lower is better) Translates to: VLQSSGAIEKEGLPG*VLNDDYGPIVLMQT Trigger: CGTCTGCATCAGTACGATGGGTCCATAGTCGTCATTCAGAACCCAGCCCGGCAGACCCTCTTTTTCAATGGCACCAGAGCTCTGAAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CAA 90 bp | AACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCTGATACCACCGTCGTCCTaGCGATCCACACGGAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: NMALQRGAQSSVELLQWLIPPSS*RSTRNR Trigger: GCGGTTCCGTGTGGATCGCAAGGACGACGGTGGTAT...CAGCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CAA 90 bp | TGCAAACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGCTCCCTCACTACAGCTaGAGAGGCGTGGATCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: CKHGFAKRCPELCGTLTMLPHYS*RGVDPR Trigger: GCGCGGATCCACGCCTCTCAAGCTGTAGTGAGGGAG...CATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS-3UTR CAA 90 bp | CAAACATGGCTTTGCAAAGAGGTGCCCAGAGCTCTGTGGAACTCTTACAATGGCAGAGCTCTGGTGCCATaGAAAAAGAGGGTCTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QTWLCKEVPRALWNSYNGRALVP*KKRVCR Trigger: CCGGCAGACCCTCTTTTTCAATGGCACCAGAGCTCT...GCCATTGTAAGAGTTCCACAGAGCTCTGGGCACCTCTTTGCAAAGCCATGTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS TCA 72 bp | GGACCGCTGCGGGGCGCGACCGCGGAACCAGGCAGCTaGGTTCCACCTCGCCGCCCTCCACTGCTTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: GPLRGATAEPGS*VPPRRPPLLAL Trigger: GAGAGCAAGCAGTGGAGGGCGGCGAGGTGGAACTCAGCTGCCTGGTTCCGCGGTCGCGCCCCGCAGCGGTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CAA 72 bp | CGTCGTCCTTGCGATCCACACGGAACCGCACGGTGCTaGCCACGCTCCACACCTTGCCGTTCTCCTGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RRPCDPHGTARC*PRSTPCRSPGR Trigger: GCGGCCAGGAGAACGGCAAGGTGTGGAGCGTGGCAAGCACCGTGCGGTTCCGTGTGGATCGCAAGGACGACG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS TCA 72 bp | AGGTGCCGTTATCTGCAGATACCAGGCCAGGTAGCGTaGGCGTCTCGCCCACCGCCTCCGCCCTCTCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RCRYLQIPGQVA*ASRPPPPPSLA Trigger: TGCCAGAGAGGGCGGAGGCGGTGGGCGAGACGCTCACGCTACCTGGCCTGGTATCTGCAGATAACGGCACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 72 bp | AGGCAGCTGAGTTCCACCTCGCCGCCCTCCACTGCTTaGTCTCGGACCTCCACCACAGGATTCTCCGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RQLSSTSPPSTA*SRTSTTGFSGA Trigger: GGCTCCGGAGAATCCTGTGGTGGAGGTCCGAGAGCAAGCAGTGGAGGGCGGCGAGGTGGAACTCAGCTGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 72 bp | CGTTCTCCTGGCCGCTGCTCACTCCTTTCAACTCCTTaGGATCCCGATACCAGCGCAGGACCGCTGCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSPGRCSLLSTP*DPDTSAGPLRG Trigger: GCCCCGCAGCGGTCCTGCGCTGGTATCGGGATCGCAAGGAGTTGAAAGGAGTGAGCAGCGGCCAGGAGAACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 72 bp | CACCGTCGTCCTTGCGATCCACACGGAACCGCACGGTaGTTGCCACGCTCCACACCTTGCCGTTCTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: HRRPCDPHGTAR*LPRSTPCRSPG Trigger: GCCAGGAGAACGGCAAGGTGTGGAGCGTGGCAAGCACCGTGCGGTTCCGTGTGGATCGCAAGGACGACGGTG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CAA 72 bp | CAGGCAGCTGAGTTCCACCTCGCCGCCCTCCACTGCTaGCTCTCGGACCTCCACCACAGGATTCTCCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QAAEFHLAALHC*LSDLHHRILRS Trigger: GCTCCGGAGAATCCTGTGGTGGAGGTCCGAGAGCAAGCAGTGGAGGGCGGCGAGGTGGAACTCAGCTGCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CAA 72 bp | CCGTTCTCCTGGCCGCTGCTCACTCCTTTCAACTCCTaGCGATCCCGATACCAGCGCAGGACCGCTGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PFSWPLLTPFNS*RSRYQRRTAAG Trigger: CCCCGCAGCGGTCCTGCGCTGGTATCGGGATCGCAAGGAGTTGAAAGGAGTGAGCAGCGGCCAGGAGAACGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 72 bp | AACCAGGCAGCTGAGTTCCACCTCGCCGCCCTCCACTaGTTGCTCTCGGACCTCCACCACAGGATTCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: NQAAEFHLAALH*LLSDLHHRILR Trigger: CCGGAGAATCCTGTGGTGGAGGTCCGAGAGCAAGCAGTGGAGGGCGGCGAGGTGGAACTCAGCTGCCTGGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CCA 72 bp | CTGATGCGCACCCGGCGCGGGGAGAACTCCTCCAGCTaGAATCGCTCGTCCTTCAGAGCTCTGGTGCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: LMRTRRGENSSS*NRSSFRALVPL Trigger: CAATGGCACCAGAGCTCTGAAGGACGAGCGATTCCAGCTGGAGGAGTTCTCCCCGCGCCGGGTGCGCATCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CAA 90 bp | CAATACCACCGTCGTCCTTGCGATCCACACGGAACCGCACGGTGCTaGCCACGCTCCACACCTTGCCGTTCTCCTGGCCGCTGCTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: QYHRRPCDPHGTARC*PRSTPCRSPGRCSL Trigger: GAGTGAGCAGCGGCCAGGAGAACGGCAAGGTGTGGAGCGTGGCAAGCACCGTGCGGTTCCGTGTGGATCGCAAGGACGACGGTGGTATTG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CAA 90 bp | CGCGCTGTGGGGGAATACTGCACATCCAGCACGTACTGCGTCTGCTaGCTGTGTCCCGAGGGCAGCGCCTGGTTCTGTGCTTCGCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: RAVGEYCTSSTYCVC*LCPEGSAWFCASQM Trigger: CATCTGCGAAGCACAGAACCAGGCGCTGCCCTCGGGACACAGCAAGCAGACGCAGTACGTGCTGGATGTGCAGTATTCCCCCACAGCGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 72 bp | CACGGAACCGCACGGTGCTTGCCACGCTCCACACCTTaGCGTTCTCCTGGCCGCTGCTCACTCCTTTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: HGTARCLPRSTP*RSPGRCSLLST Trigger: AGTTGAAAGGAGTGAGCAGCGGCCAGGAGAACGGCAAGGTGTGGAGCGTGGCAAGCACCGTGCGGTTCCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CAA 72 bp | ACACGGAACCGCACGGTGCTTGCCACGCTCCACACCTaGCCGTTCTCCTGGCCGCTGCTCACTCCTTTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: TRNRTVLATLHT*PFSWPLLTPFN Trigger: GTTGAAAGGAGTGAGCAGCGGCCAGGAGAACGGCAAGGTGTGGAGCGTGGCAAGCACCGTGCGGTTCCGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CAA 90 bp | TTGCGATCCACACGGAACCGCACGGTGCTTGCCACGCTCCACACCTaGCCGTTCTCCTGGCCGCTGCTCACTCCTTTCAACTCCTTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LRSTRNRTVLATLHT*PFSWPLLTPFNSLR Trigger: TCGCAAGGAGTTGAAAGGAGTGAGCAGCGGCCAGGAGAACGGCAAGGTGTGGAGCGTGGCAAGCACCGTGCGGTTCCGTGTGGATCGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CAA 90 bp | AGCGCCTGGTTCTGTGCTTCGCAGATGACAATACCACCGTCGTCCTaGCGATCCACACGGAACCGCACGGTGCTTGCCACGCTCCACACC | + |
|
Preference number: 6 (lower is better) Translates to: SAWFCASQMTIPPSS*RSTRNRTVLATLHT Trigger: GGTGTGGAGCGTGGCAAGCACCGTGCGGTTCCGTGTGGATCGCAAGGACGACGGTGGTATTGTCATCTGCGAAGCACAGAACCAGGCGCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS TCA 72 bp | GTCCCGAGGGCAGCGCCTGGTTCTGTGCTTCGCAGATaGCAATACCACCGTCGTCCTTGCGATCCACACGGA | + |
|
Preference number: 6 (lower is better) Translates to: VPRAAPGSVLRR*QYHRRPCDPHG Trigger: TCCGTGTGGATCGCAAGGACGACGGTGGTATTGTCATCTGCGAAGCACAGAACCAGGCGCTGCCCTCGGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS TCA 72 bp | GTCAGCACCAGAGTGTCTCCCTCCCTCACTACAGCTTaGGAGGCGTGGATCCGCGCTGTGGGGGAATACTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSTRVSPSLTTA*EAWIRAVGEYC Trigger: GCAGTATTCCCCCACAGCGCGGATCCACGCCTCTCAAGCTGTAGTGAGGGAGGGAGACACTCTGGTGCTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 72 bp | CTGCTTGCTGTGTCCCGAGGGCAGCGCCTGGTTCTGTaGTTCGCAGATGACAATACCACCGTCGTCCTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LLAVSRGQRLVL*FADDNTTVVLA Trigger: CGCAAGGACGACGGTGGTATTGTCATCTGCGAAGCACAGAACCAGGCGCTGCCCTCGGGACACAGCAAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 72 bp | GTGGGGGAATACTGCACATCCAGCACGTACTGCGTCTaGTTGCTGTGTCCCGAGGGCAGCGCCTGGTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VGEYCTSSTYCV*LLCPEGSAWFC Trigger: ACAGAACCAGGCGCTGCCCTCGGGACACAGCAAGCAGACGCAGTACGTGCTGGATGTGCAGTATTCCCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CAA 72 bp | GGGGAATACTGCACATCCAGCACGTACTGCGTCTGCTaGCTGTGTCCCGAGGGCAGCGCCTGGTTCTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GEYCTSSTYCVC*LCPEGSAWFCA Trigger: AGCACAGAACCAGGCGCTGCCCTCGGGACACAGCAAGCAGACGCAGTACGTGCTGGATGTGCAGTATTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CAA 72 bp | GGTCAGCACCAGAGTGTCTCCCTCCCTCACTACAGCTaGAGAGGCGTGGATCCGCGCTGTGGGGGAATACTG | + |
|
Preference number: 6 (lower is better) Translates to: GQHQSVSLPHYS*RGVDPRCGGIL Trigger: CAGTATTCCCCCACAGCGCGGATCCACGCCTCTCAAGCTGTAGTGAGGGAGGGAGACACTCTGGTGCTGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 72 bp | TTGCCACGCTCCACACCTTGCCGTTCTCCTGGCCGCTaGTCACTCCTTTCAACTCCTTGCGATCCCGATACC | + |
|
Preference number: 6 (lower is better) Translates to: LPRSTPCRSPGR*SLLSTPCDPDT Trigger: GGTATCGGGATCGCAAGGAGTTGAAAGGAGTGAGCAGCGGCCAGGAGAACGGCAAGGTGTGGAGCGTGGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 72 bp | GGGAATACTGCACATCCAGCACGTACTGCGTCTGCTTaGTGTGTCCCGAGGGCAGCGCCTGGTTCTGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GNTAHPARTASA*CVPRAAPGSVL Trigger: AAGCACAGAACCAGGCGCTGCCCTCGGGACACAGCAAGCAGACGCAGTACGTGCTGGATGTGCAGTATTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CCA 72 bp | TACTGCGTCTGCTTGCTGTGTCCCGAGGGCAGCGCCTaGTTCTGTGCTTCGCAGATGACAATACCACCGTCG | + |
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Preference number: 6 (lower is better) Translates to: YCVCLLCPEGSA*FCASQMTIPPS Trigger: CGACGGTGGTATTGTCATCTGCGAAGCACAGAACCAGGCGCTGCCCTCGGGACACAGCAAGCAGACGCAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CCA 72 bp | CCCTCACTACAGCTTGAGAGGCGTGGATCCGCGCTGTaGGGGAATACTGCACATCCAGCACGTACTGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: PSLQLERRGSAL*GNTAHPARTAS Trigger: AGACGCAGTACGTGCTGGATGTGCAGTATTCCCCCACAGCGCGGATCCACGCCTCTCAAGCTGTAGTGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS TCA 72 bp | GGACGGAGCACCAGACCATGCCCACTAGCACACATATaGTCAGAAACACCAGTAGCGCCAGGATGCCGCCCA | + |
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Preference number: 6 (lower is better) Translates to: GRSTRPCPLAHI*SETPVAPGCRP Trigger: TGGGCGGCATCCTGGCGCTACTGGTGTTTCTGATCATATGTGTGCTAGTGGGCATGGTCTGGTGCTCCGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CAA 72 bp | TTCTGTGCTTCGCAGATGACAATACCACCGTCGTCCTaGCGATCCACACGGAACCGCACGGTGCTTGCCACG | + |
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Preference number: 6 (lower is better) Translates to: FCASQMTIPPSS*RSTRNRTVLAT Trigger: CGTGGCAAGCACCGTGCGGTTCCGTGTGGATCGCAAGGACGACGGTGGTATTGTCATCTGCGAAGCACAGAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS GCA 72 bp | AATGGCGTAAGGAACCGATGTCTGAGCCTCTACCACTaGACCGGGGTCATAGACCACAAGCACGTAGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: NGVRNRCLSLYH*TGVIDHKHVER Trigger: GCGCTCTACGTGCTTGTGGTCTATGACCCCGGTGCAGTGGTAGAGGCTCAGACATCGGTTCCTTACGCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CCA 72 bp | TCAGAAACACCAGTAGCGCCAGGATGCCGCCCACAATaGCGTAAGGAACCGATGTCTGAGCCTCTACCACTG | + |
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Preference number: 6 (lower is better) Translates to: SETPVAPGCRPQ*RKEPMSEPLPL Trigger: CAGTGGTAGAGGCTCAGACATCGGTTCCTTACGCCATTGTGGGCGGCATCCTGGCGCTACTGGTGTTTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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| CDS CCA 72 bp | AGCTCTGGTGCCATTGAAAAAGAGGGTCTGCCGGGCTaGGTTCTGAATGACGACTATGGACCCATCGTACTG | + |
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Preference number: 6 (lower is better) Translates to: SSGAIEKEGLPG*VLNDDYGPIVL Trigger: CAGTACGATGGGTCCATAGTCGTCATTCAGAACCCAGCCCGGCAGACCCTCTTTTTCAATGGCACCAGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068023.8 |
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