Pregenerated sensors for CADM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005338Ensembl transcript IDs: ENSMUST00000005470.5, ENSMUST00000111220.8
Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTTGTCATGTCTGCCTGGCTGCTGAGGGAGGAGGGACCGAGGGCTaGCACAGGGAACCGGAGAGGGCACGGGGTGACACAGGGTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: CCHVCLAAEGGGTEG*HREPERARGDTGWR Trigger: CCTCCACCCTGTGTCACCCCGTGCCCTCTCCGGTTCCCTGTGCCAGCCCTCGGTCCCTCCTCCCTCAGCAGCCAGGCAGACATGACAACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR GCA 90 bp | GGGGCAGCAGACGTTGTTCAGGTCCACAGCTGCCTCTTCCACAGCTaGTGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCCAAGGG | + |
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Preference number: 1 (lower is better) Translates to: GAADVVQVHSCLFHS*WSWERRLSPTVPQG Trigger: CCCTTGGGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCAGCAGCTGTGGAAGAGGCAGCTGTGGACCTGAACAACGTCTGCTGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR CCA 90 bp | GCAGCAGACGTTGTTCAGGTCCACAGCTGCCTCTTCCACAGCTGCTaGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCCAAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: AADVVQVHSCLFHSC*SWERRLSPTVPQGQ Trigger: CTGCCCTTGGGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCAGCAGCTGTGGAAGAGGCAGCTGTGGACCTGAACAACGTCTGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR TCA 90 bp | CATGGCAAGGATGCAGTTCCCTTTGAGTGCCAGGTGCCCGGGACATaGGGACAGCCCTTATTTACATGCAGCCCAGCCAGCAGTGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: HGKDAVPFECQVPGT*GQPLFTCSPASSER Trigger: CCTCTCACTGCTGGCTGGGCTGCATGTAAATAAGGGCTGTCCTCATGTCCCGGGCACCTGGCACTCAAAGGGAACTGCATCCTTGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR GCA 90 bp | CCACAGAGCAGCATGGCAAGGATGCAGTTCCCTTTGAGTGCCAGGTaGCCGGGACATGAGGACAGCCCTTATTTACATGCAGCCCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: PQSSMARMQFPLSAR*PGHEDSPYLHAAQP Trigger: TGGCTGGGCTGCATGTAAATAAGGGCTGTCCTCATGTCCCGGGCACCTGGCACTCAAAGGGAACTGCATCCTTGCCATGCTGCTCTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR GCA 90 bp | GTATTACCTGAACTGAAGGAGTGGGCAGGCCTGCTGGATTGCAGCTaGCCCATTTTGCACACCTGTTGTCAGAGCAGGGAGGACATGCCG | + |
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Preference number: 1 (lower is better) Translates to: VLPELKEWAGLLDCS*PILHTCCQSREDMP Trigger: CGGCATGTCCTCCCTGCTCTGACAACAGGTGTGCAAAATGGGGCAGCTGCAATCCAGCAGGCCTGCCCACTCCTTCAGTTCAGGTAATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR GCA 90 bp | ATGAAGGTATTACCTGAACTGAAGGAGTGGGCAGGCCTGCTGGATTaGAGCTGCCCCATTTTGCACACCTGTTGTCAGAGCAGGGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: MKVLPELKEWAGLLD*SCPILHTCCQSRED Trigger: GTCCTCCCTGCTCTGACAACAGGTGTGCAAAATGGGGCAGCTGCAATCCAGCAGGCCTGCCCACTCCTTCAGTTCAGGTAATACCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR GCA 90 bp | GTGTGTCTGTGTTGGGTATCAGTGTGCCCCCATCTGAGTGCTAGGTaGTGGGTGGTGCTTGGGTGTGGGCATTGTTATCTAGAGCTATGG | + |
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Preference number: 1 (lower is better) Translates to: VCLCWVSVCPHLSAR*WVVLGCGHCYLELW Trigger: CCATAGCTCTAGATAACAATGCCCACACCCAAGCACCACCCAGCACCTAGCACTCAGATGGGGGCACACTGATACCCAACACAGACACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR CCA 90 bp | AGGTGCTGGGTGGTGCTTGGGTGTGGGCATTGTTATCTAGAGCTATaGGTGCTAGAGTGTATGAGGGACTGGAGACTGGAGGCCTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: RCWVVLGCGHCYLEL*VLECMRDWRLEACQ Trigger: TTGACAGGCCTCCAGTCTCCAGTCCCTCATACACTCTAGCACCCATAGCTCTAGATAACAATGCCCACACCCAAGCACCACCCAGCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR TCA 90 bp | GAGCCTAGCTTCATTCACTGTGTGGGAGCAATGGGTGAACAGGGCTaGTTCCACCACCCTCTCTGGAAATCTACTCTCACTGGGAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: EPSFIHCVGAMGEQG*FHHPLWKSTLTGRN Trigger: GTTCCTCCCAGTGAGAGTAGATTTCCAGAGAGGGTGGTGGAATCAGCCCTGTTCACCCATTGCTCCCACACAGTGAATGAAGCTAGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR CCA 90 bp | CACACTCAGGAAGCTCAACCTCACACCCACAGGCTTCTTAAACCTTaGGCTAGCATCGGGCACCATCCTGGGGCTTCCTGTTTTGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: HTQEAQPHTHRLLKP*ASIGHHPGASCFEV Trigger: AACTTCAAAACAGGAAGCCCCAGGATGGTGCCCGATGCTAGCCCAAGGTTTAAGAAGCCTGTGGGTGTGAGGTTGAGCTTCCTGAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR CCA 90 bp | GCAGCACGAGTAGAGGAATGCACATATTTATCTGTGTGTCTGTGTTaGGTATCAGTGTGCCCCCATCTGAGTGCTAGGTGCTGGGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: AARVEECTYLSVCLC*VSVCPHLSARCWVV Trigger: CACCACCCAGCACCTAGCACTCAGATGGGGGCACACTGATACCCAACACAGACACACAGATAAATATGTGCATTCCTCTACTCGTGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR TCA 90 bp | AGCCCTTGCTCCTCATTCATTTCTAATCCCTCCAACTTCCTCCTCTaGACATTACAGATTCGTTGCTCTCCTTACCCCCATGGCCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: SPCSSFISNPSNFLL*TLQIRCSPYPHGPC Trigger: GCAGGGGCCATGGGGGTAAGGAGAGCAACGAATCTGTAATGTTCAGAGGAGGAAGTTGGAGGGATTAGAAATGAATGAGGAGCAAGGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR TCA 90 bp | CATATTTATCTGTGTGTCTGTGTTGGGTATCAGTGTGCCCCCATCTaGGTGCTAGGTGCTGGGTGGTGCTTGGGTGTGGGCATTGTTATC | + |
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Preference number: 1 (lower is better) Translates to: HIYLCVCVGYQCAPI*VLGAGWCLGVGIVI Trigger: GATAACAATGCCCACACCCAAGCACCACCCAGCACCTAGCACTCAGATGGGGGCACACTGATACCCAACACAGACACACAGATAAATATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR CCA 90 bp | CCTGAGAAGAAAGTAGAAGAAGCAGTAGGACAGAGGCAAGGGTTATaGAACATGGTCCCCACACTCACCGGATACAGACAGTTCCCCATG | + |
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Preference number: 1 (lower is better) Translates to: PEKKVEEAVGQRQGL*NMVPTLTGYRQFPM Trigger: CATGGGGAACTGTCTGTATCCGGTGAGTGTGGGGACCATGTTCCATAACCCTTGCCTCTGTCCTACTGCTTCTTCTACTTTCTTCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR GCA 90 bp | TTGGCTCTATCCAGACAGAGTAGGCCTTCAGTTGGAGGCCTTTTGTaGGTGGCAGCACGAGTAGAGGAATGCACATATTTATCTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: LALSRQSRPSVGGLL*VAARVEECTYLSVC Trigger: ACACACAGATAAATATGTGCATTCCTCTACTCGTGCTGCCACGCACAAAAGGCCTCCAACTGAAGGCCTACTCTGTCTGGATAGAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR TCA 90 bp | TGTGAGACTATAGCCTATTGGGTAATCTCTATTCATATTCTGTTGTaGAACATACAGACTGTGAGAATGCTTCATTGGTTTGGCATCTCG | + |
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Preference number: 1 (lower is better) Translates to: CETIAYWVISIHILL*NIQTVRMLHWFGIS Trigger: CGAGATGCCAAACCAATGAAGCATTCTCACAGTCTGTATGTTTCACAACAGAATATGAATAGAGATTACCCAATAGGCTATAGTCTCACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGGAACACGGTGAAGCCCTGGGTTCTTGTGTGGCTGCATGCTATCTTCAGCGGGAGGGGCGGCCCTaGGGTCGCTCTGTACAAGTC | + |
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Preference number: 2 (lower is better) Translates to: WEEHGEALGSCVAACYLQREGRP*GRSVQV Trigger: GACTTGTACAGAGCGACCCCAGGGCCGCCCCTCCCG...CTGAAGATAGCATGCAGCCACACAAGAACCCAGGGCTTCACCGTGTTCCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCCAAGGGCAGATTCTGTTACGGGAGGGGCGGCCCTaGGGTCGCTCTGTACAAGTC | + |
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Preference number: 2 (lower is better) Translates to: WSWERRLSPTVPQGQILLREGRP*GRSVQV Trigger: GACTTGTACAGAGCGACCCCAGGGCCGCCCCTCCCG...TAACAGAATCTGCCCTTGGGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCAATGCCATAAGAGGAGCGGTTGCCGTGCAACAGTCCAGGGGCTCGGGTACAAGTCCAGGTTGGTaGCAGCCCAGCAGTCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: LSNAIRGAVAVQQSRGSGTSPGW*QPSSPH Trigger: ATGGGGACTGCTGGGCTGTCACCAACCTGGACTTGT...ACCCGAGCCCCTGGACTGTTGCACGGCAACCGCTCCTCTTATGGCATTGCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR-3UTR TCA 90 bp | GTTGCTGAGCAATGCCATAAGAGGAGCGGTTGCCGTGCAACAGTCCAGGGGCTCAGAGAGGTGGCAGTGTaGCACCCATCTCCCTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: VAEQCHKRSGCRATVQGLREVAV*HPSPCL Trigger: CAGACAGGGAGATGGGTGTCACACTGCCACCTCTCT...GAGCCCCTGGACTGTTGCACGGCAACCGCTCCTCTTATGGCATTGCTCAGCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCAATGCCATAAGAGGAGCGGTTGCCGTGCAACAGTCCAGGGGCTCGGGTCTCTTCCACAGCTGCTaGAGCTGGGAGAGAAGACTG | + |
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Preference number: 2 (lower is better) Translates to: LSNAIRGAVAVQQSRGSGLFHSC*SWERRL Trigger: CAGTCTTCTCTCCCAGCTCCAGCAGCTGTGGAAGAG...ACCCGAGCCCCTGGACTGTTGCACGGCAACCGCTCCTCTTATGGCATTGCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR-3UTR TCA 90 bp | GAACATTACAGATTCGTTGCTCTCCTTACCCCCATGGCCCCTGCCTCTCCAGCCACAAGTCCAGGTTGGTaGCAGCCCAGCAGTCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: EHYRFVALLTPMAPASPATSPGW*QPSSPH Trigger: ATGGGGACTGCTGGGCTGTCACCAACCTGGACTTGT...GGCTGGAGAGGCAGGGGCCATGGGGGTAAGGAGAGCAACGAATCTGTAATGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCTCAGGTCTTTACCTCCATCACAGAGGCGGCCAGCATTGCTGGACAGAGGGGTTCAGGTCCACAGCTaGCTCTTCCACAGCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LLRSLPPSQRRPALLDRGVQVHS*LFHSCW Trigger: CCAGCAGCTGTGGAAGAGGCAGCTGTGGACCTGAAC...CCCTCTGTCCAGCAATGCTGGCCGCCTCTGTGATGGAGGTAAAGACCTGAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGGTGCTAGAGTGTATGAGGGACTGGAGACTGGAGGCCTGTCAAGGCTCTGTAGAGGCGGCCAGCATTaGTGGACAGAGGGTAACGGG | + |
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Preference number: 2 (lower is better) Translates to: MGARVYEGLETGGLSRLCRGGQH*WTEGNG Trigger: CCCGTTACCCTCTGTCCAGCAATGCTGGCCGCCTCT...ACAGAGCCTTGACAGGCCTCCAGTCTCCAGTCCCTCATACACTCTAGCACCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR-3UTR CCA 90 bp | GGCGGCCAGCATTGCTGGACAGAGGGTAACGGGGTAGCAGTCGGGTGGCATGCTATTATTCCCTCGGTTTaGGCAGGAAACAGCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: GGQHCWTEGNGVAVGWHAIIPSV*AGNSSL Trigger: CAGTGAGCTGTTTCCTGCCCAAACCGAGGGAATAAT...AGCATGCCACCCGACTGCTACCCCGTTACCCTCTGTCCAGCAATGCTGGCCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCCAAGGGCAGATTCTGTTAATGGGTGAACAGGGCTaGTTCCACCACCCTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: WSWERRLSPTVPQGQILLMGEQG*FHHPLW Trigger: CCAGAGAGGGTGGTGGAATCAGCCCTGTTCACCCAT...TAACAGAATCTGCCCTTGGGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR-3UTR GCA 90 bp | ACACAGGGTGGAGGAGTAGTTGCTGAGCAATGCCATAAGAGGAGCGGTTGCCGTGTTCAGGTCCACAGCTaGCTCTTCCACAGCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TQGGGVVAEQCHKRSGCRVQVHS*LFHSCW Trigger: CCAGCAGCTGTGGAAGAGGCAGCTGTGGACCTGAAC...ACGGCAACCGCTCCTCTTATGGCATTGCTCAGCAACTACTCCTCCACCCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR-3UTR GCA 90 bp | CCCACAGGCTTCTTAAACCTTGGGCTAGCATCGGGCACCATCCTGGGGCTTCCTGACCCAGGGCTCCCTTaGTGCTATAAGAGGAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: PTGFLNLGLASGTILGLPDPGLP*CYKRRS Trigger: ACTTCTCCTCTTATAGCAGCAAGGGAGCCCTGGGTC...AGGAAGCCCCAGGATGGTGCCCGATGCTAGCCCAAGGTTTAAGAAGCCTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCAATGCCATAAGAGGAGCGGTTGCCGTGCAACAGTCCAGGGGCTCGGGTTTCCACCACCCTCTCTaGAAATCTACTCTCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: LSNAIRGAVAVQQSRGSGFHHPL*KSTLTG Trigger: CCCAGTGAGAGTAGATTTCCAGAGAGGGTGGTGGAA...ACCCGAGCCCCTGGACTGTTGCACGGCAACCGCTCCTCTTATGGCATTGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGAAAGGAGGCAGCCTGACCACATGGATAATCCAGATATATTGAGGGTGGTCACAGGAGCCCATCCCTaGGACCCAGGGCTCCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: AERRQPDHMDNPDILRVVTGAHP*DPGLPC Trigger: GCAAGGGAGCCCTGGGTCCCAGGGATGGGCTCCTGT...GACCACCCTCAATATATCTGGATTATCCATGTGGTCAGGCTGCCTCCTTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCTTCTTAAACCTTGGGCTAGCATCGGGCACCATCCTGGGGCTTCCTGTTTTGCAGGCCTGCTGGATTaGAGCTGCCCCATTTTGCAC | + |
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Preference number: 2 (lower is better) Translates to: RLLKPWASIGHHPGASCFAGLLD*SCPILH Trigger: GTGCAAAATGGGGCAGCTGCAATCCAGCAGGCCTGC...AAAACAGGAAGCCCCAGGATGGTGCCCGATGCTAGCCCAAGGTTTAAGAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCTTCTTAAACCTTGGGCTAGCATCGGGCACCATCCTGGGGCTTCCTGTTTTCCTGAACTGAAGGAGTaGGCAGGCCTGCTGGATTGC | + |
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Preference number: 2 (lower is better) Translates to: RLLKPWASIGHHPGASCFPELKE*AGLLDC Trigger: GCAATCCAGCAGGCCTGCCCACTCCTTCAGTTCAGG...AAAACAGGAAGCCCCAGGATGGTGCCCGATGCTAGCCCAAGGTTTAAGAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR CAA 90 bp | CATACAGATGCTCCACAGAGCAGCATGGCAAGGATGCAGTTCCCTTaGAGTGCCAGGTGCCCGGGACATGAGGACAGCCCTTATTTACAT | + |
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Preference number: 2 (lower is better) Translates to: HTDAPQSSMARMQFP*SARCPGHEDSPYLH Trigger: ATGTAAATAAGGGCTGTCCTCATGTCCCGGGCACCTGGCACTCAAAGGGAACTGCATCCTTGCCATGCTGCTCTGTGGAGCATCTGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCTTCCACAGCTGCTGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCCCACAAACCAGCCCTTaGTCCTCATTCATTTCTAAT | + |
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Preference number: 2 (lower is better) Translates to: CLFHSCWSWERRLSPTVPPQTSP*SSFISN Trigger: ATTAGAAATGAATGAGGAGCAAGGGCTGGTTTGTGG...GGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCAGCAGCTGTGGAAGAGGCA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCCCCAAGGGCAGATTCTGTTAAAAGAGCCTAGCTTCATTCACTGTGTGGGAGCCACCACTAGCCCCTaGTTCCATTCCCAGGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: VPQGQILLKEPSFIHCVGATTSP*FHSQVP Trigger: AGGAACCTGGGAATGGAAGCAGGGGCTAGTGGTGGC...TCCCACACAGTGAATGAAGCTAGGCTCTTTTAACAGAATCTGCCCTTGGGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGGGCAGCAGACGTTGTTCAGGTCCACAGCTGCCTCTTCCACAGCTGCTGGACCTTGGAGACGGATTTaGTTTGGGATTGTTACAAAA | + |
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Preference number: 2 (lower is better) Translates to: WGQQTLFRSTAASSTAAGPWRRI*FGIVTK Trigger: TTTTGTAACAATCCCAAATCAAATCCGTCTCCAAGG...TCCAGCAGCTGTGGAAGAGGCAGCTGTGGACCTGAACAACGTCTGCTGCCCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGTGTGTGTGTATATATATATATATTCAGAGTCACACTCAGGAAGCTCAACCGGAGGGACCGAGGGCTaGCACAGGGAACCGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GVCVYIYIYSESHSGSSTGGTEG*HREPER Trigger: CCTCTCCGGTTCCCTGTGCCAGCCCTCGGTCCCTCC...GGTTGAGCTTCCTGAGTGTGACTCTGAATATATATATATATACACACACACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGAAAGGAGGCAGCCTGACCACATGGATAATCCAGATATATTGAGGGTGGTCGCATCGAGAGTGGCCTaGAAATGGCTAGAATGGAGC | + |
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Preference number: 2 (lower is better) Translates to: AERRQPDHMDNPDILRVVASRVA*KWLEWS Trigger: GCTCCATTCTAGCCATTTCCAGGCCACTCTCGATGC...GACCACCCTCAATATATCTGGATTATCCATGTGGTCAGGCTGCCTCCTTTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR-3UTR TCA 90 bp | CCCACAGGCTTCTTAAACCTTGGGCTAGCATCGGGCACCATCCTGGGGCTTCCTTTCAGATCACATCTCTaGACACTATCCTTCTCATTT | + |
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Preference number: 2 (lower is better) Translates to: PTGFLNLGLASGTILGLPFRSHL*TLSFSF Trigger: AAATGAGAAGGATAGTGTTCAGAGATGTGATCTGAA...AGGAAGCCCCAGGATGGTGCCCGATGCTAGCCCAAGGTTTAAGAAGCCTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGAAAGGAGGCAGCCTGACCACATGGATAATCCAGATATATTGAGGGTGGTCCATGAAGGTATTACCTaGACTGAAGGAGTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: AERRQPDHMDNPDILRVVHEGIT*TEGVGR Trigger: CCTGCCCACTCCTTCAGTTCAGGTAATACCTTCATG...GACCACCCTCAATATATCTGGATTATCCATGTGGTCAGGCTGCCTCCTTTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGTCCAGGGAAAGGTGGCGAATGCATGGTATTTCAGAGAGGGTCAAAATGCATTTTGTTGTCATGTCTaGCTGGCTGCTGAGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: EVQGKVANAWYFREGQNAFCCHV*LAAEGG Trigger: TCCTCCCTCAGCAGCCAGGCAGACATGACAACAAAA...TGCATTTTGACCCTCTCTGAAATACCATGCATTCGCCACCTTTCCCTGGACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCCCCAAGGGCAGATTCTGTTAAAAGAGCCTAGCTTCATTCACTGTGTGGGAGTAATGGAAGAGAGGTaGCAGTGTGACACCCATCTC | + |
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Preference number: 2 (lower is better) Translates to: VPQGQILLKEPSFIHCVGVMEER*QCDTHL Trigger: GAGATGGGTGTCACACTGCCACCTCTCTTCCATTAC...TCCCACACAGTGAATGAAGCTAGGCTCTTTTAACAGAATCTGCCCTTGGGGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCGTGGCAGCACGAGTAGAGGAATGCACATATTTATCTGTGTGTCTGTGTTGAACACGGTGAAGCCCTaGGTTCTTGTGTGGCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: VRGSTSRGMHIFICVSVLNTVKP*VLVWLH Trigger: ATGCAGCCACACAAGAACCCAGGGCTTCACCGTGTT...CAACACAGACACACAGATAAATATGTGCATTCCTCTACTCGTGCTGCCACGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR CAA 90 bp | TTAAACCTTGGGCTAGCATCGGGCACCATCCTGGGGCTTCCTGTTTaGAAGTTGGATTTGCCTGATCAGAATGACCTCAGGAAACGAACA | + |
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Preference number: 2 (lower is better) Translates to: LNLGLASGTILGLPV*KLDLPDQNDLRKRT Trigger: TGTTCGTTTCCTGAGGTCATTCTGATCAGGCAAATCCAACTTCAAAACAGGAAGCCCCAGGATGGTGCCCGATGCTAGCCCAAGGTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCCAAGGGCAGATTCTGTTACCTTGGAGACGGATTTaGTTTGGGATTGTTACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: WSWERRLSPTVPQGQILLPWRRI*FGIVTK Trigger: TTTTGTAACAATCCCAAATCAAATCCGTCTCCAAGG...TAACAGAATCTGCCCTTGGGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTCACTGGGAGGAACACGGTGAAGCCCTGGGTTCTTGTGTGGCTGCATGCTTTCAGATCACATCTCTaGACACTATCCTTCTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: TLTGRNTVKPWVLVWLHAFRSHL*TLSFSF Trigger: AAATGAGAAGGATAGTGTTCAGAGATGTGATCTGAA...AGCATGCAGCCACACAAGAACCCAGGGCTTCACCGTGTTCCTCCCAGTGAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTCTCTGGCCAGGAGAAATACAGGATACATGTTCAATATGTGGGTTCCCATTAGCTGGGAGAGAAGACTaGGCCCTACTGTCCCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: FLWPGEIQDTCSICGFPLAGRED*ALLSPK Trigger: CTTGGGGGACAGTAGGGCTCAGTCTTCTCTCCCAGC...TAATGGGAACCCACATATTGAACATGTATCCTGTATTTCTCCTGGCCAGAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGCGTGGCAGCACGAGTAGAGGAATGCACATATTTATCTGTGTGTCTGTGTTGGTAATGGAAGAGAGGTaGCAGTGTGACACCCATCTC | + |
|
Preference number: 2 (lower is better) Translates to: VRGSTSRGMHIFICVSVLVMEER*QCDTHL Trigger: GAGATGGGTGTCACACTGCCACCTCTCTTCCATTAC...CAACACAGACACACAGATAAATATGTGCATTCCTCTACTCGTGCTGCCACGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTCCCCCAAGGGCAGATTCTGTTAAAAGAGCCTAGCTTCATTCACTGTGTGTTCCACCACCCTCTCTaGAAATCTACTCTCACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: TVPQGQILLKEPSFIHCVFHHPL*KSTLTG Trigger: CCCAGTGAGAGTAGATTTCCAGAGAGGGTGGTGGAA...CACACAGTGAATGAAGCTAGGCTCTTTTAACAGAATCTGCCCTTGGGGGACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTGGCCAGGAGAAATACAGGATACATGTTCAATATGTGGGTTCCCATTAACCACAGCTGCTGGAGCTaGGAGAGAAGACTGAGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SLARRNTGYMFNMWVPINHSCWS*ERRLSP Trigger: AGGGCTCAGTCTTCTCTCCCAGCTCCAGCAGCTGTG...GTTAATGGGAACCCACATATTGAACATGTATCCTGTATTTCTCCTGGCCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTCTCTGGCCAGGAGAAATACAGGATACATGTTCAATATGTGGGTTCCCATTACTGGGAGGAACACGGTaGAGCCCTGGGTTCTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: FLWPGEIQDTCSICGFPLLGGTR*SPGFLC Trigger: ACACAAGAACCCAGGGCTTCACCGTGTTCCTCCCAG...TAATGGGAACCCACATATTGAACATGTATCCTGTATTTCTCCTGGCCAGAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTCCAGGGAAAGGTGGCGAATGCATGGTATTTCAGAGAGGGTCAAAATGCATGGAAATGGCTAGAATaGAGCAGCCCTCTAGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: EVQGKVANAWYFREGQNAWKWLE*SSPLDE Trigger: TTCATCTAGAGGGCTGCTCCATTCTAGCCATTTCCA...TGCATTTTGACCCTCTCTGAAATACCATGCATTCGCCACCTTTCCCTGGACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTGTGTGTGTGTATATATATATATATTCAGAGTCACACTCAGGAAGCTCAACCATGGGTGAACAGGGCTaGTTCCACCACCCTCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GVCVYIYIYSESHSGSSTMGEQG*FHHPLW Trigger: CCAGAGAGGGTGGTGGAATCAGCCCTGTTCACCCAT...GGTTGAGCTTCCTGAGTGTGACTCTGAATATATATATATATACACACACACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTGTGTGTGTGTATATATATATATATTCAGAGTCACACTCAGGAAGCTCAACCGCCACCACTAGCCCCTaGTTCCATTCCCAGGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GVCVYIYIYSESHSGSSTATTSP*FHSQVP Trigger: AGGAACCTGGGAATGGAAGCAGGGGCTAGTGGTGGC...GGTTGAGCTTCCTGAGTGTGACTCTGAATATATATATATATACACACACACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCCCCCAAGGGCAGATTCTGTTAAAAGAGCCTAGCTTCATTCACTGTGTGGGATCTTGTGTGGCTGCATaGTATCTTCAGATCACATCT | + |
|
Preference number: 2 (lower is better) Translates to: VPQGQILLKEPSFIHCVGSCVAA*YLQITS Trigger: AGATGTGATCTGAAGATAGCATGCAGCCACACAAGA...TCCCACACAGTGAATGAAGCTAGGCTCTTTTAACAGAATCTGCCCTTGGGGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTGGCCAGGAGAAATACAGGATACATGTTCAATATGTGGGTTCCCATTAACCAGCCCTTATTTACATaGAGCCCAGCCAGCAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SLARRNTGYMFNMWVPINQPLFT*SPASSE Trigger: CTCACTGCTGGCTGGGCTGCATGTAAATAAGGGCTG...GTTAATGGGAACCCACATATTGAACATGTATCCTGTATTTCTCCTGGCCAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTGTGTGTGTATATATATATATATTCAGAGTCACACTCAGGAAGCTCAACCGTGCTAGGTGCTGGGTaGTGCTTGGGTGTGGGCATT | + |
|
Preference number: 2 (lower is better) Translates to: GVCVYIYIYSESHSGSSTVLGAG*CLGVGI Trigger: AATGCCCACACCCAAGCACCACCCAGCACCTAGCAC...GGTTGAGCTTCCTGAGTGTGACTCTGAATATATATATATATACACACACACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR CCA 90 bp | AATATTCTCTGGAAAGCAAAGGACTCAGACACTCTCTGTCCCTCGATTCCACATGGCTTCTGTGTAATATaGACAGAGTGGTTCAGCTCG | + |
|
Preference number: 2 (lower is better) Translates to: NILWKAKDSDTLCPSIPHGFCVI*TEWFSS Trigger: CGAGCTGAACCACTCTGTCCATATTACACAGAAGCC...ATGTGGAATCGAGGGACAGAGAGTGTCTGAGTCCTTTGCTTTCCAGAGAATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTCTGGCCAGGAGAAATACAGGATACATGTTCAATATGTGGGTTCCCATTACTCCACAGAGCAGCATaGCAAGGATGCAGTTCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: FLWPGEIQDTCSICGFPLLHRAA*QGCSSL Trigger: AAGGGAACTGCATCCTTGCCATGCTGCTCTGTGGAG...TAATGGGAACCCACATATTGAACATGTATCCTGTATTTCTCCTGGCCAGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR CAA 90 bp | ACACACACATACACACATGTACAGAGTTCACATTATTCCCTCGGTTaGGGCAGGAAACAGCTCACTGCAGCGAAGCTCCTTTTAGTAATT | + |
|
Preference number: 2 (lower is better) Translates to: THTYTHVQSSHYSLG*GRKQLTAAKLLLVI Trigger: AATTACTAAAAGGAGCTTCGCTGCAGTGAGCTGTTTCCTGCCCAAACCGAGGGAATAATGTGAACTCTGTACATGTGTGTATGTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTGGCTGCATGCTATCTTCAGATCACATCTCTGAACACTATCCTTCTCATTCCACAAACCAGCCCTTaGTCCTCATTCATTTCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: CVAACYLQITSLNTILLIPQTSP*SSFISN Trigger: ATTAGAAATGAATGAGGAGCAAGGGCTGGTTTGTGG...AATGAGAAGGATAGTGTTCAGAGATGTGATCTGAAGATAGCATGCAGCCACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTGTGTGTGTGTATATATATATATATTCAGAGTCACACTCAGGAAGCTCAACCCACCTATGGACTCAATaGATGCATCTCTCACACCAA | + |
|
Preference number: 2 (lower is better) Translates to: GVCVYIYIYSESHSGSSTHLWTQ*MHLSHQ Trigger: TTGGTGTGAGAGATGCATTCATTGAGTCCATAGGTG...GGTTGAGCTTCCTGAGTGTGACTCTGAATATATATATATATACACACACACACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTGTGTGTGTATATATATATATATTCAGAGTCACACTCAGGAAGCTCAACCGTGAGAATGCTTCATTaGTTTGGCATCTCGGCAATA | + |
|
Preference number: 2 (lower is better) Translates to: GVCVYIYIYSESHSGSSTVRMLH*FGISAI Trigger: TATTGCCGAGATGCCAAACCAATGAAGCATTCTCAC...GGTTGAGCTTCCTGAGTGTGACTCTGAATATATATATATATACACACACACACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR CCA 72 bp | TGGGTGGGCTGGGGGAGCAAGCGGGAGGGGCGGCCCTaGGGTCGCTCTGTACAAGTCCAGGTTGGTGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: WVGWGSKREGRP*GRSVQVQVGDS Trigger: GCTGTCACCAACCTGGACTTGTACAGAGCGACCCCAGGGCCGCCCCTCCCGCTTGCTCCCCCAGCCCACCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR GCA 72 bp | AGTGTCCACTCCCAAAGACCCGCCTCATGTGTCCCATaGCCTGTTCCCCCACCTGAGACCCCTGGTCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SVHSQRPASCVP*PVPPPETPGPS Trigger: AGAAGGACCAGGGGTCTCAGGTGGGGGAACAGGGCATGGGACACATGAGGCGGGTCTTTGGGAGTGGACACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR GCA 72 bp | AGTCACTGGGTACAGAAGATGGGGATCCAGGGTCAGTaGCAGGGAGAGGGGTGCATAGCAGAGACGGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SHWVQKMGIQGQ*QGEGCIAETVA Trigger: GGCCACCGTCTCTGCTATGCACCCCTCTCCCTGGCACTGACCCTGGATCCCCATCTTCTGTACCCAGTGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR CCA 72 bp | TGGTCCCCACACTCACCGGATACAGACAGTTCCCCATaGCACTGCAGGCTCAGGGCAGAGAAGTACAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: WSPHSPDTDSSP*HCRLRAEKYRA Trigger: GGCCCTGTACTTCTCTGCCCTGAGCCTGCAGTGCCATGGGGAACTGTCTGTATCCGGTGAGTGTGGGGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGGCAGCAGACGTTGTTCAGGTCCACAGCTGCCTCTTCCACAGCTGCTGGACCTGCCTCTCCAGCCTaGGAGACGGATTTGATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: WGQQTLFRSTAASSTAAGPASPA*ETDLIW Trigger: CCAAATCAAATCCGTCTCCAAGGCTGGAGAGGCAGG...TCCAGCAGCTGTGGAAGAGGCAGCTGTGGACCTGAACAACGTCTGCTGCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCACAGGCTTCTTAAACCTTGGGCTAGCATCGGGCACCATCCTGGGGCTTCCTTCAGTTGGAGGCCTTTaGTGCGTGGCAGCACGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: PTGFLNLGLASGTILGLPSVGGL*CVAARV Trigger: TACTCGTGCTGCCACGCACAAAAGGCCTCCAACTGA...AGGAAGCCCCAGGATGGTGCCCGATGCTAGCCCAAGGTTTAAGAAGCCTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR TCA 72 bp | GATGCAGTTCCCTTTGAGTGCCAGGTGCCCGGGACATaGGGACAGCCCTTATTTACATGCAGCCCAGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: DAVPFECQVPGT*GQPLFTCSPAS Trigger: GCTGGCTGGGCTGCATGTAAATAAGGGCTGTCCTCATGTCCCGGGCACCTGGCACTCAAAGGGAACTGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR GCA 72 bp | GGGGTGACACAGGGTGGAGGAGTAGTTGCTGAGCAATaGCATAAGAGGAGCGGTTGCCGTGCAACAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GVTQGGGVVAEQ*HKRSGCRATVQ Trigger: CTGGACTGTTGCACGGCAACCGCTCCTCTTATGGCATTGCTCAGCAACTACTCCTCCACCCTGTGTCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR GCA 72 bp | GAACTGAAGGAGTGGGCAGGCCTGCTGGATTGCAGCTaGCCCATTTTGCACACCTGTTGTCAGAGCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ELKEWAGLLDCS*PILHTCCQSRE Trigger: CTCCCTGCTCTGACAACAGGTGTGCAAAATGGGGCAGCTGCAATCCAGCAGGCCTGCCCACTCCTTCAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR CCA 72 bp | GAAGCTCAACCTCACACCCACAGGCTTCTTAAACCTTaGGCTAGCATCGGGCACCATCCTGGGGCTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: EAQPHTHRLLKP*ASIGHHPGASC Trigger: ACAGGAAGCCCCAGGATGGTGCCCGATGCTAGCCCAAGGTTTAAGAAGCCTGTGGGTGTGAGGTTGAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAGGAACACGGTGAAGCCCTGGGTTCTTGTGTGGCTGCATGCTATCTTCAGCCTGCCTCTCCAGCCTaGGAGACGGATTTGATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: WEEHGEALGSCVAACYLQPASPA*ETDLIW Trigger: CCAAATCAAATCCGTCTCCAAGGCTGGAGAGGCAGG...CTGAAGATAGCATGCAGCCACACAAGAACCCAGGGCTTCACCGTGTTCCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR TCA 72 bp | TCCCTTGCTGCTATAAGAGGAGAAGTCCTGGCTAAGTaGGGGGCTACCTGGGGTGCCCAGATTCCTAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLAAIRGEVLAK*GATWGAQIPNQ Trigger: CTGGTTAGGAATCTGGGCACCCCAGGTAGCCCCTCACTTAGCCAGGACTTCTCCTCTTATAGCAGCAAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR GCA 72 bp | TTACCTGAACTGAAGGAGTGGGCAGGCCTGCTGGATTaGAGCTGCCCCATTTTGCACACCTGTTGTCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LPELKEWAGLLD*SCPILHTCCQS Trigger: GCTCTGACAACAGGTGTGCAAAATGGGGCAGCTGCAATCCAGCAGGCCTGCCCACTCCTTCAGTTCAGGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR CCA 72 bp | CCACCACTAGCCCCTGCTTCCATTCCCAGGTTCCTTTaGGGCCACATCTGCTGTAAAAATGGAAGGAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PPLAPASIPRFL*GHICCKNGRRA Trigger: AGCCCTCCTTCCATTTTTACAGCAGATGTGGCCCCAAAGGAACCTGGGAATGGAAGCAGGGGCTAGTGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR GCA 72 bp | CCTGCTTCCATTCCCAGGTTCCTTTGGGGCCACATCTaGTGTAAAAATGGAAGGAGGGCTGTGTTAAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: PASIPRFLWGHI*CKNGRRAVLSP Trigger: GGGGCTTAACACAGCCCTCCTTCCATTTTTACAGCAGATGTGGCCCCAAAGGAACCTGGGAATGGAAGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR GCA 72 bp | AGCATGGCAAGGATGCAGTTCCCTTTGAGTGCCAGGTaGCCGGGACATGAGGACAGCCCTTATTTACATGCA | + |
|
Preference number: 3 (lower is better) Translates to: SMARMQFPLSAR*PGHEDSPYLHA Trigger: TGCATGTAAATAAGGGCTGTCCTCATGTCCCGGGCACCTGGCACTCAAAGGGAACTGCATCCTTGCCATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR GCA 72 bp | CTCAGACACTCTCTGTCCCTCGATTCCACATACAGATaGTCCACAGAGCAGCATGGCAAGGATGCAGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LRHSLSLDSTYR*STEQHGKDAVP Trigger: GGGAACTGCATCCTTGCCATGCTGCTCTGTGGAGCATCTGTATGTGGAATCGAGGGACAGAGAGTGTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR GCA 72 bp | TGTTGGGTATCAGTGTGCCCCCATCTGAGTGCTAGGTaGTGGGTGGTGCTTGGGTGTGGGCATTGTTATCTA | + |
|
Preference number: 3 (lower is better) Translates to: CWVSVCPHLSAR*WVVLGCGHCYL Trigger: TAGATAACAATGCCCACACCCAAGCACCACCCAGCACCTAGCACTCAGATGGGGGCACACTGATACCCAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTCTTCCACAGCTGCTGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCGCCTTGGAGACGGATTaGATTTGGGATTGTTACAAA | + |
|
Preference number: 3 (lower is better) Translates to: CLFHSCWSWERRLSPTVPALETD*IWDCYK Trigger: TTTGTAACAATCCCAAATCAAATCCGTCTCCAAGGC...GGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCAGCAGCTGTGGAAGAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR TCA 72 bp | CTCTCTGGAAATCTACTCTCACTGGGAGGAACACGGTaGAGCCCTGGGTTCTTGTGTGGCTGCATGCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: LSGNLLSLGGTR*SPGFLCGCMLS Trigger: AGATAGCATGCAGCCACACAAGAACCCAGGGCTTCACCGTGTTCCTCCCAGTGAGAGTAGATTTCCAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR TCA 72 bp | GGCCTGGAAATGGCTAGAATGGAGCAGCCCTCTAGATaGAGTACAAGCCCTGACTACAAAGTGTCCACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GLEMARMEQPSR*STSPDYKVSTP Trigger: GGGAGTGGACACTTTGTAGTCAGGGCTTGTACTTCATCTAGAGGGCTGCTCCATTCTAGCCATTTCCAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR CCA 72 bp | CAGAGATGGGAGGTCCAGGGAAAGGTGGCGAATGCATaGTATTTCAGAGAGGGTCAAAATGCACAGCCCGAT | + |
|
Preference number: 3 (lower is better) Translates to: QRWEVQGKVANA*YFREGQNAQPD Trigger: ATCGGGCTGTGCATTTTGACCCTCTCTGAAATACCATGCATTCGCCACCTTTCCCTGGACCTCCCATCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR TCA 72 bp | TTCATTCACTGTGTGGGAGCAATGGGTGAACAGGGCTaGTTCCACCACCCTCTCTGGAAATCTACTCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: FIHCVGAMGEQG*FHHPLWKSTLT Trigger: AGTGAGAGTAGATTTCCAGAGAGGGTGGTGGAATCAGCCCTGTTCACCCATTGCTCCCACACAGTGAATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR TCA 72 bp | TTGCCTGATCAGAATGACCTCAGGAAACGAACACGGTaGGGTCCACAAAGGGGGAATTTTCCCAAAGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LPDQNDLRKRTR*GPQRGNFPKGD Trigger: GTCACCTTTGGGAAAATTCCCCCTTTGTGGACCTCACCGTGTTCGTTTCCTGAGGTCATTCTGATCAGGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR CCA 72 bp | AAATCTACTCTCACTGGGAGGAACACGGTGAAGCCCTaGGTTCTTGTGTGGCTGCATGCTATCTTCAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: KSTLTGRNTVKP*VLVWLHAIFRS Trigger: TGATCTGAAGATAGCATGCAGCCACACAAGAACCCAGGGCTTCACCGTGTTCCTCCCAGTGAGAGTAGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR GCA 72 bp | GAACACGGTGAAGCCCTGGGTTCTTGTGTGGCTGCATaGTATCTTCAGATCACATCTCTGAACACTATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: EHGEALGSCVAA*YLQITSLNTIL Trigger: AAGGATAGTGTTCAGAGATGTGATCTGAAGATAGCATGCAGCCACACAAGAACCCAGGGCTTCACCGTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR GCA 72 bp | GGAGGCCTTTTGTGCGTGGCAGCACGAGTAGAGGAATaGACATATTTATCTGTGTGTCTGTGTTGGGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: GGLLCVAARVEE*TYLSVCLCWVS Trigger: TGATACCCAACACAGACACACAGATAAATATGTGCATTCCTCTACTCGTGCTGCCACGCACAAAAGGCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR CCA 72 bp | TCCTTCTCATTTCTTCCTTATGTAATGGAAGAGAGGTaGCAGTGTGACACCCATCTCCCTGTCTGTAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SFSFLPYVMEER*QCDTHLPVCSA Trigger: TGCACTACAGACAGGGAGATGGGTGTCACACTGCCACCTCTCTTCCATTACATAAGGAAGAAATGAGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTCCCCCAAGGGCAGATTCTGTTAAAAGAGCCTAGCTTCATTCACTGTGTGGCCTTGGAGACGGATTaGATTTGGGATTGTTACAAA | + |
|
Preference number: 3 (lower is better) Translates to: TVPQGQILLKEPSFIHCVALETD*IWDCYK Trigger: TTTGTAACAATCCCAAATCAAATCCGTCTCCAAGGC...CACACAGTGAATGAAGCTAGGCTCTTTTAACAGAATCTGCCCTTGGGGGACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGCGTGGCAGCACGAGTAGAGGAATGCACATATTTATCTGTGTGTCTGTGTTGCTTTTAGTAATTTTGTaGTCATGTCTGCCTGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VRGSTSRGMHIFICVSVLLLVIL*SCLPGC Trigger: GCAGCCAGGCAGACATGACAACAAAATTACTAAAAG...CAACACAGACACACAGATAAATATGTGCATTCCTCTACTCGTGCTGCCACGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTGTGTGTGTATATATATATATATTCAGAGTCACACTCAGGAAGCTCAACCTGCAGCTGCCCCATTTaGCACACCTGTTGTCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GVCVYIYIYSESHSGSSTCSCPI*HTCCQS Trigger: GCTCTGACAACAGGTGTGCAAAATGGGGCAGCTGCA...GGTTGAGCTTCCTGAGTGTGACTCTGAATATATATATATATACACACACACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR TCA 72 bp | GCCATAAGAAGGAAGACAGTCAACCAAAAGCTGATATaGGTACCCAGTCGTCTAGTCACTGGGTACAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: AIRRKTVNQKLI*VPSRLVTGYRR Trigger: TCTTCTGTACCCAGTGACTAGACGACTGGGTACTCATATCAGCTTTTGGTTGACTGTCTTCCTTCTTATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR CCA 72 bp | TGGTACAAATATGGCTTCTGTGTAATATGGACAGAGTaGTTCAGCTCGAAGAGGAAAAGTTGTTTCCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: WYKYGFCVIWTE*FSSKRKSCFPK Trigger: TTTGGGGAAACAACTTTTCCTCTTCGAGCTGAACCACTCTGTCCATATTACACAGAAGCCATATTTGTACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTGTGTGTGTATATATATATATATTCAGAGTCACACTCAGGAAGCTCAACCTGTGAGAATGCTTCATaGGTTTGGCATCTCGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: GVCVYIYIYSESHSGSSTCENAS*VWHLGN Trigger: ATTGCCGAGATGCCAAACCAATGAAGCATTCTCACA...GGTTGAGCTTCCTGAGTGTGACTCTGAATATATATATATATACACACACACACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR TCA 72 bp | CTTGTGTGGCTGCATGCTATCTTCAGATCACATCTCTaGACACTATCCTTCTCATTTCTTCCTTATGTAATG | + |
|
Preference number: 3 (lower is better) Translates to: LVWLHAIFRSHL*TLSFSFLPYVM Trigger: CATTACATAAGGAAGAAATGAGAAGGATAGTGTTCAGAGATGTGATCTGAAGATAGCATGCAGCCACACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR TCA 72 bp | ATAGCCTATTGGGTAATCTCTATTCATATTCTGTTGTaGAACATACAGACTGTGAGAATGCTTCATTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: IAYWVISIHILL*NIQTVRMLHWF Trigger: AAACCAATGAAGCATTCTCACAGTCTGTATGTTTCACAACAGAATATGAATAGAGATTACCCAATAGGCTAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | GACACCCATCTCCCTGTCTGTAGTGCAGGGCCAGCAGAGGAAGAGCCACCACTACGTCCTGGGAAAGATTaGCCCCGCCGGGCGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DTHLPVCSAGPAEEEPPLRPGKD*PRRAPR Trigger: CCTGGGCGCCCGGCGGGGCCAATCTTTCCCAGGACG...TAGTGGTGGCTCTTCCTCTGCTGGCCCTGCACTACAGACAGGGAGATGGGTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | GCCCCTCCGAGGTGGGGGCAGCAGACGTTGTTCAGGTCCACAGCTGCCTCTTCCTGGCCTTCTCGAGGATaGGCAGGTTCTGGCCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: APPRWGQQTLFRSTAASSWPSRG*AGSGLI Trigger: GATTAGGCCAGAACCTGCTCATCCTCGAGAAGGCCA...GGAAGAGGCAGCTGTGGACCTGAACAACGTCTGCTGCCCCCACCTCGGAGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTCTTCCACAGCTGCTGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCCTTGTCATCCCCGCCTaGCTGCCCGCCTTCTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLFHSCWSWERRLSPTVPLVIPA*LPAFCV Trigger: AACGCAGAAGGCGGGCAGTCAGGCGGGGATGACAAG...GGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCAGCAGCTGTGGAAGAGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGGGTGGAGGAGTAGTTGCTGAGCAATGCCATAAGAGGAGCGGTTGCCGTCGTCCTGGGAAAGATTaGCCCCGCCGGGCGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQGGGVVAEQCHKRSGCRRPGKD*PRRAPR Trigger: CCTGGGCGCCCGGCGGGGCCAATCTTTCCCAGGACG...ACGGCAACCGCTCCTCTTATGGCATTGCTCAGCAACTACTCCTCCACCCTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGTAGTGCAGGGCCAGCAGAGGAAGAGCCACCACTAGCCCCTGCTTCCATTGAGGGCCTCCTCCAGTaGAGCCGGAGTTCCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCSAGPAEEEPPLAPASIEGLLQ*SRSSQL Trigger: GAGCTGGGAACTCCGGCTCCACTGGAGGAGGCCCTC...AATGGAAGCAGGGGCTAGTGGTGGCTCTTCCTCTGCTGGCCCTGCACTACAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005470.5 |
||
| 3UTR CAA 72 bp | GCTCCACAGAGCAGCATGGCAAGGATGCAGTTCCCTTaGAGTGCCAGGTGCCCGGGACATGAGGACAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: APQSSMARMQFP*SARCPGHEDSP Trigger: AGGGCTGTCCTCATGTCCCGGGCACCTGGCACTCAAAGGGAACTGCATCCTTGCCATGCTGCTCTGTGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | CCCACAGGCTTCTTAAACCTTGGGCTAGCATCGGGCACCATCCTGGGGCTTCCTCACCTTTCCTCCAGGTaGGCTGGGCTGCAGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTGFLNLGLASGTILGLPHLSSR*AGLQVC Trigger: GCAAACCTGCAGCCCAGCTCACCTGGAGGAAAGGTG...AGGAAGCCCCAGGATGGTGCCCGATGCTAGCCCAAGGTTTAAGAAGCCTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTCACTGGGAGGAACACGGTGAAGCCCTGGGTTCTTGTGTGGCTGCATGCTCTTGTCATCCCCGCCTaGCTGCCCGCCTTCTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLTGRNTVKPWVLVWLHALVIPA*LPAFCV Trigger: AACGCAGAAGGCGGGCAGTCAGGCGGGGATGACAAG...AGCATGCAGCCACACAAGAACCCAGGGCTTCACCGTGTTCCTCCCAGTGAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR GCA 90 bp | GCCCCTCCGAGGTGGGGGCAGCAGACGTTGTTCAGGTCCACAGCTGCCTCTTCCGCAGGGTTAGACCACTaGAGAGATGAGTCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: APPRWGQQTLFRSTAASSAGLDH*RDESSW Trigger: CCATGAAGACTCATCTCTGCAGTGGTCTAACCCTGC...GGAAGAGGCAGCTGTGGACCTGAACAACGTCTGCTGCCCCCACCTCGGAGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGTAGTGCAGGGCCAGCAGAGGAAGAGCCACCACTAGCCCCTGCTTCCATTTCATCCCCGCCTGACTaGCCGCCTTCTGCGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VCSAGPAEEEPPLAPASISSPPD*PPSALM Trigger: CATCAACGCAGAAGGCGGGCAGTCAGGCGGGGATGA...AATGGAAGCAGGGGCTAGTGGTGGCTCTTCCTCTGCTGGCCCTGCACTACAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTTCCACAGCTGCTGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCTTCCTCCAGGTGAGCTaGGCTGCAGGTTTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLFHSCWSWERRLSPTVPFLQVS*AAGLLP Trigger: TGGGAGCAAACCTGCAGCCCAGCTCACCTGGAGGAA...GGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCAGCAGCTGTGGAAGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGTAGTGCAGGGCCAGCAGAGGAAGAGCCACCACTAGCCCCTGCTTCCATTTGGCGTGGTAGGTACTaGAGGACGAGGGCACTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VCSAGPAEEEPPLAPASIWRGRY*RTRALD Trigger: GTCCAGTGCCCTCGTCCTCCAGTACCTACCACGCCA...AATGGAAGCAGGGGCTAGTGGTGGCTCTTCCTCTGCTGGCCCTGCACTACAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGGCAGCAGACGTTGTTCAGGTCCACAGCTGCCTCTTCCACAGCTGCTGGATGGCCTTCTCGAGGATaGGCAGGTTCTGGCCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: WGQQTLFRSTAASSTAAGWPSRG*AGSGLI Trigger: GATTAGGCCAGAACCTGCTCATCCTCGAGAAGGCCA...TCCAGCAGCTGTGGAAGAGGCAGCTGTGGACCTGAACAACGTCTGCTGCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | GACACCCATCTCCCTGTCTGTAGTGCAGGGCCAGCAGAGGAAGAGCCACCACTATTCCTCCAGGTGAGCTaGGCTGCAGGTTTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DTHLPVCSAGPAEEEPPLFLQVS*AAGLLP Trigger: TGGGAGCAAACCTGCAGCCCAGCTCACCTGGAGGAA...TAGTGGTGGCTCTTCCTCTGCTGGCCCTGCACTACAGACAGGGAGATGGGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCAGCAGACGTTGTTCAGGTCCACAGCTGCCTCTTCCACAGCTGCTGGACCGTTGGGATCTTCCTaGATTCGTGTTTGGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: WGQQTLFRSTAASSTAAGPLGSS*IRVWSP Trigger: CGGGGACCAAACACGAATCCAGGAAGATCCCAACGG...TCCAGCAGCTGTGGAAGAGGCAGCTGTGGACCTGAACAACGTCTGCTGCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCAGCAGACGTTGTTCAGGTCCACAGCTGCCTCTTCCACAGCTGCTGGACTGATGCTGAGCTCATaGGGAGTAGAGCTAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WGQQTLFRSTAASSTAAGLMLSS*GVELTS Trigger: GCTGGTTAGCTCTACTCCCCATGAGCTCAGCATCAG...TCCAGCAGCTGTGGAAGAGGCAGCTGTGGACCTGAACAACGTCTGCTGCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGTAGTGCAGGGCCAGCAGAGGAAGAGCCACCACTAGCCCCTGCTTCCATTTCCCCGTGGAGTTCTTaGTCACCTTTCCTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VCSAGPAEEEPPLAPASISPWSS*SPFLQV Trigger: CACCTGGAGGAAAGGTGACCAAGAACTCCACGGGGA...AATGGAAGCAGGGGCTAGTGGTGGCTCTTCCTCTGCTGGCCCTGCACTACAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | GACACCCATCTCCCTGTCTGTAGTGCAGGGCCAGCAGAGGAAGAGCCACCACTACTGAGCTGCTCACAGTaGAGGTTTTCCCGTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DTHLPVCSAGPAEEEPPLLSCSQ*RFSRWD Trigger: ATCCCAACGGGAAAACCTTCACTGTGAGCAGCTCAG...TAGTGGTGGCTCTTCCTCTGCTGGCCCTGCACTACAGACAGGGAGATGGGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | GAACATTACAGATTCGTTGCTCTCCTTACCCCCATGGCCCCTGCCTCTCCAGCCCCACAATCCCTCCAATaGTGGCGTGGTAGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: EHYRFVALLTPMAPASPAPQSLQ*WRGRYW Trigger: CCAGTACCTACCACGCCATCATTGGAGGGATTGTGG...GGCTGGAGAGGCAGGGGCCATGGGGGTAAGGAGAGCAACGAATCTGTAATGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTCACTGGGAGGAACACGGTGAAGCCCTGGGTTCTTGTGTGGCTGCATGCTCCACAATCCCTCCAATaGTGGCGTGGTAGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLTGRNTVKPWVLVWLHAPQSLQ*WRGRYW Trigger: CCAGTACCTACCACGCCATCATTGGAGGGATTGTGG...AGCATGCAGCCACACAAGAACCCAGGGCTTCACCGTGTTCCTCCCAGTGAGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGGCAGCAGACGTTGTTCAGGTCCACAGCTGCCTCTTCCACAGCTGCTGGAGCAGGGTTAGACCACTaGAGAGATGAGTCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: WGQQTLFRSTAASSTAAGAGLDH*RDESSW Trigger: CCATGAAGACTCATCTCTGCAGTGGTCTAACCCTGC...TCCAGCAGCTGTGGAAGAGGCAGCTGTGGACCTGAACAACGTCTGCTGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCCAAGGGCAGATTCTGTTACCAGGTGAGCTGGGCTaGAGGTTTGCTCCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WSWERRLSPTVPQGQILLPGELG*RFAPRR Trigger: TCTTCTGGGAGCAAACCTGCAGCCCAGCTCACCTGG...TAACAGAATCTGCCCTTGGGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGTAGTGCAGGGCCAGCAGAGGAAGAGCCACCACTAGCCCCTGCTTCCATTCTGATGCTGAGCTCATaGGGAGTAGAGCTAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCSAGPAEEEPPLAPASILMLSS*GVELTS Trigger: GCTGGTTAGCTCTACTCCCCATGAGCTCAGCATCAG...AATGGAAGCAGGGGCTAGTGGTGGCTCTTCCTCTGCTGGCCCTGCACTACAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCAAACCGAGTACAAAACCGCACCCAAAGCAGACATTCTGTACAGGGGGCTCAGGGCTGGCTATCTTaGCTGGCCAGCAGGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPNRVQNRTQSRHSVQGAQGWLS*LASRSG Trigger: CCCTGACCTGCTGGCCAGTCAAGATAGCCAGCCCTG...AGCCCCCTGTACAGAATGTCTGCTTTGGGTGCGGTTTTGTACTCGGTTTGGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005470.5 |
||
| CDS-3UTR TCA 90 bp | TGCCTCTTCCACAGCTGCTGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCCTTTTACTTGACACTTaGGAACCACTGTGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLFHSCWSWERRLSPTVPLLLDT*EPLCHQ Trigger: CTGGTGGCACAGTGGTTCTCAAGTGTCAAGTAAAAG...GGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCAGCAGCTGTGGAAGAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTCACTGGGAGGAACACGGTGAAGCCCTGGGTTCTTGTGTGGCTGCATGCTAAGTATAGGGTCTGCTaGGCAGGGTTAGACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLTGRNTVKPWVLVWLHAKYRVC*AGLDHC Trigger: GCAGTGGTCTAACCCTGCTCAGCAGACCCTATACTT...AGCATGCAGCCACACAAGAACCCAGGGCTTCACCGTGTTCCTCCCAGTGAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTCTTCCACAGCTGCTGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCTTGCTCCCAGAAGACTaGCAATTTAGAGTGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLFHSCWSWERRLSPTVPLLPED*QFRVAV Trigger: GACAGCCACTCTAAATTGTCAGTCTTCTGGGAGCAA...GGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCAGCAGCTGTGGAAGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCTGAGCAATGCCATAAGAGGAGCGGTTGCCGTGCAACAGTCCAGGGGCTCAACACTTCAATGCGCTaGGAAGTGGATCTGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VAEQCHKRSGCRATVQGLNTSMR*EVDLSA Trigger: AGCCGACAGATCCACTTCTCAGCGCATTGAAGTGTT...GAGCCCCTGGACTGTTGCACGGCAACCGCTCCTCTTATGGCATTGCTCAGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCCAAGGGCAGATTCTGTTATCCTCCCGGGTAACCTaGAATGACACTGAGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WSWERRLSPTVPQGQILLSSRVT*NDTELL Trigger: GAGCAGCTCAGTGTCATTCCAGGTTACCCGGGAGGA...TAACAGAATCTGCCCTTGGGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | GACACCCATCTCCCTGTCTGTAGTGCAGGGCCAGCAGAGGAAGAGCCACCACTATGCCCATGTTGCTTGTaGCTGTACAGCCATAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DTHLPVCSAGPAEEEPPLCPCCL*LYSHKC Trigger: GCACTTATGGCTGTACAGCCACAAGCAACATGGGCA...TAGTGGTGGCTCTTCCTCTGCTGGCCCTGCACTACAGACAGGGAGATGGGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR CAA 72 bp | TCCCTCCAACTTCCTCCTCTGAACATTACAGATTCGTaGCTCTCCTTACCCCCATGGCCCCTGCCTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLQLPPLNITDS*LSLPPWPLPLQ Trigger: CTGGAGAGGCAGGGGCCATGGGGGTAAGGAGAGCAACGAATCTGTAATGTTCAGAGGAGGAAGTTGGAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCCAAGGGCAGATTCTGTTAAAGTATAGGGTCTGCTaGGCAGGGTTAGACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: WSWERRLSPTVPQGQILLKYRVC*AGLDHC Trigger: GCAGTGGTCTAACCCTGCTCAGCAGACCCTATACTT...TAACAGAATCTGCCCTTGGGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAGGAACACGGTGAAGCCCTGGGTTCTTGTGTGGCTGCATGCTATCTTCAGCTGAGCTGCTCACAGTaGAGGTTTTCCCGTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WEEHGEALGSCVAACYLQLSCSQ*RFSRWD Trigger: ATCCCAACGGGAAAACCTTCACTGTGAGCAGCTCAG...CTGAAGATAGCATGCAGCCACACAAGAACCCAGGGCTTCACCGTGTTCCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCCAAGGGCAGATTCTGTTAAGAGCACACGATGTTTaGTCCATCATCCTCCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WSWERRLSPTVPQGQILLRAHDV*SIILPG Trigger: ACCCGGGAGGATGATGGAGCAAACATCGTGTGCTCT...TAACAGAATCTGCCCTTGGGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGAACACGGTGAAGCCCTGGGTTCTTGTGTGGCTGCATGCTATCTTCAGCGTGTTTGGTCCCCGTaGAGTTCTTGGTCACCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WEEHGEALGSCVAACYLQRVWSP*SSWSPF Trigger: GAAAGGTGACCAAGAACTCCACGGGGACCAAACACG...CTGAAGATAGCATGCAGCCACACAAGAACCCAGGGCTTCACCGTGTTCCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR CAA 72 bp | GGGCTAGCATCGGGCACCATCCTGGGGCTTCCTGTTTaGAAGTTGGATTTGCCTGATCAGAATGACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLASGTILGLPV*KLDLPDQNDLR Trigger: CCTGAGGTCATTCTGATCAGGCAAATCCAACTTCAAAACAGGAAGCCCCAGGATGGTGCCCGATGCTAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTCTTCCACAGCTGCTGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCTCATGGTCTTTTACTTaGCACTTGAGAACCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLFHSCWSWERRLSPTVPSWSFT*HLRTTV Trigger: CACAGTGGTTCTCAAGTGTCAAGTAAAAGACCATGA...GGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCAGCAGCTGTGGAAGAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGTAGTGCAGGGCCAGCAGAGGAAGAGCCACCACTAGCCCCTGCTTCCATTAGACCACTGCAGAGATaGGTCTTCATGGTCTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VCSAGPAEEEPPLAPASIRPLQR*VFMVFY Trigger: GTAAAAGACCATGAAGACTCATCTCTGCAGTGGTCT...AATGGAAGCAGGGGCTAGTGGTGGCTCTTCCTCTGCTGGCCCTGCACTACAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCTGAGCAATGCCATAAGAGGAGCGGTTGCCGTGCAACAGTCCAGGGGCTCAGACCACTGCAGAGATaGGTCTTCATGGTCTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VAEQCHKRSGCRATVQGLRPLQR*VFMVFY Trigger: GTAAAAGACCATGAAGACTCATCTCTGCAGTGGTCT...GAGCCCCTGGACTGTTGCACGGCAACCGCTCCTCTTATGGCATTGCTCAGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCCCAAGGGCAGATTCTGTTAAAAGAGCCTAGCTTCATTCACTGTGTGGGACCAGGTGAGCTGGGCTaGAGGTTTGCTCCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPQGQILLKEPSFIHCVGPGELG*RFAPRR Trigger: TCTTCTGGGAGCAAACCTGCAGCCCAGCTCACCTGG...TCCCACACAGTGAATGAAGCTAGGCTCTTTTAACAGAATCTGCCCTTGGGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | CCACAAACCAGCCCTTGCTCCTCATTCATTTCTAATCCCTCCAACTTCCTCCTCGGCCGTATCCGCATCTaGAGCATCGTCGGAACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQTSPCSSFISNPSNFLLGRIRI*SIVGTL Trigger: AAGGGTTCCGACGATGCTCCAGATGCGGATACGGCC...GAGGAGGAAGTTGGAGGGATTAGAAATGAATGAGGAGCAAGGGCTGGTTTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCAAACCGAGTACAAAACCGCACCCAAAGCAGACATTCTGTACAGGGGGCTTCCTCCCGGGTAACCTaGAATGACACTGAGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IPNRVQNRTQSRHSVQGASSRVT*NDTELL Trigger: GAGCAGCTCAGTGTCATTCCAGGTTACCCGGGAGGA...AGCCCCCTGTACAGAATGTCTGCTTTGGGTGCGGTTTTGTACTCGGTTTGGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGGGTGGAGGAGTAGTTGCTGAGCAATGCCATAAGAGGAGCGGTTGCCGTCCCTTCAGAGATTCATaGTTCACAGAGCACACGATG | + |
|
Preference number: 4 (lower is better) Translates to: TQGGGVVAEQCHKRSGCRPFRDS*FTEHTM Trigger: CATCGTGTGCTCTGTGAACCATGAATCTCTGAAGGG...ACGGCAACCGCTCCTCTTATGGCATTGCTCAGCAACTACTCCTCCACCCTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | GTGCGTGGCAGCACGAGTAGAGGAATGCACATATTTATCTGTGTGTCTGTGTTGTCCCCGTGGAGTTCTTaGTCACCTTTCCTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VRGSTSRGMHIFICVSVLSPWSS*SPFLQV Trigger: CACCTGGAGGAAAGGTGACCAAGAACTCCACGGGGA...CAACACAGACACACAGATAAATATGTGCATTCCTCTACTCGTGCTGCCACGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCAAACCGAGTACAAAACCGCACCCAAAGCAGACATTCTGTACAGGGGGCTCGTGTTTGGTCCCCGTaGAGTTCTTGGTCACCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPNRVQNRTQSRHSVQGARVWSP*SSWSPF Trigger: GAAAGGTGACCAAGAACTCCACGGGGACCAAACACG...AGCCCCCTGTACAGAATGTCTGCTTTGGGTGCGGTTTTGTACTCGGTTTGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | AATATTCTCTGGAAAGCAAAGGACTCAGACACTCTCTGTCCCTCGATTCCACATTGGCGTGGTAGGTACTaGAGGACGAGGGCACTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NILWKAKDSDTLCPSIPHWRGRY*RTRALD Trigger: GTCCAGTGCCCTCGTCCTCCAGTACCTACCACGCCA...ATGTGGAATCGAGGGACAGAGAGTGTCTGAGTCCTTTGCTTTCCAGAGAATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR CAA 72 bp | GGCACCATCCTGGGGCTTCCTGTTTTGAAGTTGGATTaGCCTGATCAGAATGACCTCAGGAAACGAACACGG | + |
|
Preference number: 4 (lower is better) Translates to: GTILGLPVLKLD*PDQNDLRKRTR Trigger: CCGTGTTCGTTTCCTGAGGTCATTCTGATCAGGCAAATCCAACTTCAAAACAGGAAGCCCCAGGATGGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| 3UTR CAA 72 bp | GCATCGGGCACCATCCTGGGGCTTCCTGTTTTGAAGTaGGATTTGCCTGATCAGAATGACCTCAGGAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: ASGTILGLPVLK*DLPDQNDLRKR Trigger: TCGTTTCCTGAGGTCATTCTGATCAGGCAAATCCAACTTCAAAACAGGAAGCCCCAGGATGGTGCCCGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | ACACAGGGTGGAGGAGTAGTTGCTGAGCAATGCCATAAGAGGAGCGGTTGCCGTTCATGGTCTTTTACTTaGCACTTGAGAACCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TQGGGVVAEQCHKRSGCRSWSFT*HLRTTV Trigger: CACAGTGGTTCTCAAGTGTCAAGTAAAAGACCATGA...ACGGCAACCGCTCCTCTTATGGCATTGCTCAGCAACTACTCCTCCACCCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTGGCTGCATGCTATCTTCAGATCACATCTCTGAACACTATCCTTCTCATTCACCTTTCCTCCAGGTaGGCTGGGCTGCAGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVAACYLQITSLNTILLIHLSSR*AGLQVC Trigger: GCAAACCTGCAGCCCAGCTCACCTGGAGGAAAGGTG...AATGAGAAGGATAGTGTTCAGAGATGTGATCTGAAGATAGCATGCAGCCACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCAAACCGAGTACAAAACCGCACCCAAAGCAGACATTCTGTACAGGGGGCTAACACTTCAATGCGCTaGGAAGTGGATCTGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPNRVQNRTQSRHSVQGANTSMR*EVDLSA Trigger: AGCCGACAGATCCACTTCTCAGCGCATTGAAGTGTT...AGCCCCCTGTACAGAATGTCTGCTTTGGGTGCGGTTTTGTACTCGGTTTGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGGCTGCATGCTATCTTCAGATCACATCTCTGAACACTATCCTTCTCATTTCATCCCCGCCTGACTaGCCGCCTTCTGCGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: CVAACYLQITSLNTILLISSPPD*PPSALM Trigger: CATCAACGCAGAAGGCGGGCAGTCAGGCGGGGATGA...AATGAGAAGGATAGTGTTCAGAGATGTGATCTGAAGATAGCATGCAGCCACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | CCACAAACCAGCCCTTGCTCCTCATTCATTTCTAATCCCTCCAACTTCCTCCTCTGCCCATGTTGCTTGTaGCTGTACAGCCATAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQTSPCSSFISNPSNFLLCPCCL*LYSHKC Trigger: GCACTTATGGCTGTACAGCCACAAGCAACATGGGCA...GAGGAGGAAGTTGGAGGGATTAGAAATGAATGAGGAGCAAGGGCTGGTTTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| 3UTR CAA 72 bp | AGGAGGCAGCCTGACCACATGGATAATCCAGATATATaGAGGGTGGTCCCTCTGAGATTAGCACAGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRQPDHMDNPDI*RVVPLRLAQES Trigger: ACTCTCCTGTGCTAATCTCAGAGGGACCACCCTCAATATATCTGGATTATCCATGTGGTCAGGCTGCCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | AATAATAATAACCCAAACGCAGAGAAGCCACAAAAGGGGCTGAGGGCGACCCACCTTTTACTTGACACTTaGGAACCACTGTGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NNNNPNAEKPQKGLRATHLLLDT*EPLCHQ Trigger: CTGGTGGCACAGTGGTTCTCAAGTGTCAAGTAAAAG...GTGGGTCGCCCTCAGCCCCTTTTGTGGCTTCTCTGCGTTTGGGTTATTATTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | AATAATAATAACCCAAACGCAGAGAAGCCACAAAAGGGGCTGAGGGCGACCCACGTAGAGCTAACCAGCTaGATCCGATTATCTCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NNNNPNAEKPQKGLRATHVELTS*IRLSRR Trigger: CCTTCGAGATAATCGGATTCAGCTGGTTAGCTCTAC...GTGGGTCGCCCTCAGCCCCTTTTGTGGCTTCTCTGCGTTTGGGTTATTATTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAGGAACACGGTGAAGCCCTGGGTTCTTGTGTGGCTGCATGCTATCTTCAGATGACTTATAACCAGTaGTTATGGGTTTCTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WEEHGEALGSCVAACYLQMTYNQ*LWVSVG Trigger: TCCCACAGAAACCCATAATCACTGGTTATAAGTCAT...CTGAAGATAGCATGCAGCCACACAAGAACCCAGGGCTTCACCGTGTTCCTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTCCAGGGAAAGGTGGCGAATGCATGGTATTTCAGAGAGGGTCAAAATGCATCAAAAAGGGGAAGATaGGAGCACTCTCTTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVQGKVANAWYFREGQNASKRGR*EHSLGS Trigger: TGACCCAAGAGAGTGCTCTCATCTTCCCCTTTTTGA...TGCATTTTGACCCTCTCTGAAATACCATGCATTCGCCACCTTTCCCTGGACCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| CDS-3UTR GCA 90 bp | AATAATAATAACCCAAACGCAGAGAAGCCACAAAAGGGGCTGAGGGCGACCCACTATAGCTGCCCATGTTaGTTGTGGCTGTACAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NNNNPNAEKPQKGLRATHYSCPC*LWLYSH Trigger: ATGGCTGTACAGCCACAAGCAACATGGGCAGCTATA...GTGGGTCGCCCTCAGCCCCTTTTGTGGCTTCTCTGCGTTTGGGTTATTATTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTAATCCCTCCAACTTCCTCCTCTGAACATTACAGATTCGTTGCTCTCCTTGGCCGTATCCGCATCTaGAGCATCGTCGGAACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLIPPTSSSEHYRFVALLGRIRI*SIVGTL Trigger: AAGGGTTCCGACGATGCTCCAGATGCGGATACGGCC...AAGGAGAGCAACGAATCTGTAATGTTCAGAGGAGGAAGTTGGAGGGATTAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | TCTTGTGTGGCTGCATGCTATCTTCAGATCACATCTCTGAACACTATCCTTCTCGCAGCAGGAAGACAATaGAAGCCACAATCCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SCVAACYLQITSLNTILLAAGRQ*KPQSLQ Trigger: TTGGAGGGATTGTGGCTTTCATTGTCTTCCTGCTGC...GAGAAGGATAGTGTTCAGAGATGTGATCTGAAGATAGCATGCAGCCACACAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | AATATTCTCTGGAAAGCAAAGGACTCAGACACTCTCTGTCCCTCGATTCCACATGCAGCAGGAAGACAATaGAAGCCACAATCCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NILWKAKDSDTLCPSIPHAAGRQ*KPQSLQ Trigger: TTGGAGGGATTGTGGCTTTCATTGTCTTCCTGCTGC...ATGTGGAATCGAGGGACAGAGAGTGTCTGAGTCCTTTGCTTTCCAGAGAATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTGGCCAGGAGAAATACAGGATACATGTTCAATATGTGGGTTCCCATTACCGTTGGGATCTTCCTaGATTCGTGTTTGGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FLWPGEIQDTCSICGFPLPLGSS*IRVWSP Trigger: CGGGGACCAAACACGAATCCAGGAAGATCCCAACGG...TAATGGGAACCCACATATTGAACATGTATCCTGTATTTCTCCTGGCCAGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | AATATTCTCTGGAAAGCAAAGGACTCAGACACTCTCTGTCCCTCGATTCCACATGTAGAGCTAACCAGCTaGATCCGATTATCTCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NILWKAKDSDTLCPSIPHVELTS*IRLSRR Trigger: CCTTCGAGATAATCGGATTCAGCTGGTTAGCTCTAC...ATGTGGAATCGAGGGACAGAGAGTGTCTGAGTCCTTTGCTTTCCAGAGAATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTCCAGGGAAAGGTGGCGAATGCATGGTATTTCAGAGAGGGTCAAAATGCAATGACTTATAACCAGTaGTTATGGGTTTCTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EVQGKVANAWYFREGQNAMTYNQ*LWVSVG Trigger: TCCCACAGAAACCCATAATCACTGGTTATAAGTCAT...TGCATTTTGACCCTCTCTGAAATACCATGCATTCGCCACCTTTCCCTGGACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | TCTTGTGTGGCTGCATGCTATCTTCAGATCACATCTCTGAACACTATCCTTCTCTTGCTCCCAGAAGACTaGCAATTTAGAGTGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SCVAACYLQITSLNTILLLLPED*QFRVAV Trigger: GACAGCCACTCTAAATTGTCAGTCTTCTGGGAGCAA...GAGAAGGATAGTGTTCAGAGATGTGATCTGAAGATAGCATGCAGCCACACAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR TCA 90 bp | TCTTGTGTGGCTGCATGCTATCTTCAGATCACATCTCTGAACACTATCCTTCTCTCAAAAAGGGGAAGATaGGAGCACTCTCTTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCVAACYLQITSLNTILLSKRGR*EHSLGS Trigger: TGACCCAAGAGAGTGCTCTCATCTTCCCCTTTTTGA...GAGAAGGATAGTGTTCAGAGATGTGATCTGAAGATAGCATGCAGCCACACAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTAATCCCTCCAACTTCCTCCTCTGAACATTACAGATTCGTTGCTCTCCTTTATAGCTGCCCATGTTaGTTGTGGCTGTACAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLIPPTSSSEHYRFVALLYSCPC*LWLYSH Trigger: ATGGCTGTACAGCCACAAGCAACATGGGCAGCTATA...AAGGAGAGCAACGAATCTGTAATGTTCAGAGGAGGAAGTTGGAGGGATTAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCTCCGAGGTGGGGGCAGCAGACGTTGTTCAGGTCCACAGCTGCCTCTTCCTCGGCCAGCGCCACATaGCTGATGCTGATGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: APPRWGQQTLFRSTAASSSASAT*LMLMLS Trigger: GCTCAGCATCAGCATCAGCAATGTGGCGCTGGCCGA...GGAAGAGGCAGCTGTGGACCTGAACAACGTCTGCTGCCCCCACCTCGGAGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAGGAACACGGTGAAGCCCTGGGTTCTTGTGTGGCTGCATGCTATCTTCAGCCGTCCTGGGAAAGATaGGCCCCGCCGGGCGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WEEHGEALGSCVAACYLQPSWER*APPGAQ Trigger: CTGGGCGCCCGGCGGGGCCAATCTTTCCCAGGACGG...CTGAAGATAGCATGCAGCCACACAAGAACCCAGGGCTTCACCGTGTTCCTCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005470.5 |
||
| CDS-3UTR CAA 90 bp | GCCCCTCCGAGGTGGGGGCAGCAGACGTTGTTCAGGTCCACAGCTGCCTCTTCCACAGTGACAAGGGACTaGGCGGTTCGCACAGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: APPRWGQQTLFRSTAASSTVTRD*AVRTGI Trigger: TATGCCTGTGCGAACCGCCAAGTCCCTTGTCACTGT...GGAAGAGGCAGCTGTGGACCTGAACAACGTCTGCTGCCCCCACCTCGGAGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCAGCAGACGTTGTTCAGGTCCACAGCTGCCTCTTCCACAGCTGCTGGATGCCCGCCTTCTGCGTaGATGATGGCCGTATCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: WGQQTLFRSTAASSTAAGCPPSA*MMAVSA Trigger: TGCGGATACGGCCATCATCAACGCAGAAGGCGGGCA...TCCAGCAGCTGTGGAAGAGGCAGCTGTGGACCTGAACAACGTCTGCTGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS TCA 90 bp | TATCTTGACTGGCCAGCAGGTCAGGGTTGCTCCAGACTGTGGAGCTaGGGGCCTCCTCCAGTGGAGCCGGAGTTCCCAGCTCCAAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: YLDWPAGQGCSRLWS*GPPPVEPEFPAPNP Trigger: AGGATTTGGAGCTGGGAACTCCGGCTCCACTGGAGGAGGCCCTCAGCTCCACAGTCTGGAGCAACCCTGACCTGCTGGCCAGTCAAGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005470.5 |
||
| CDS-3UTR CAA 90 bp | CTGAGCAATGCCATAAGAGGAGCGGTTGCCGTGCAACAGTCCAGGGGCTCGGGTGTCCCCGTGGAGTTCTaGGTCACCTTTCCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSNAIRGAVAVQQSRGSGVPVEF*VTFPPG Trigger: ACCTGGAGGAAAGGTGACCAAGAACTCCACGGGGAC...ACCCGAGCCCCTGGACTGTTGCACGGCAACCGCTCCTCTTATGGCATTGCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCTCCGAGGTGGGGGCAGCAGACGTTGTTCAGGTCCACAGCTGCCTCTTCCGTGAAGGTTTTCCCGTaGGGATCTTCCTGGATTCGT | + |
|
Preference number: 5 (lower is better) Translates to: APPRWGQQTLFRSTAASSVKVFP*GSSWIR Trigger: ACGAATCCAGGAAGATCCCAACGGGAAAACCTTCAC...GGAAGAGGCAGCTGTGGACCTGAACAACGTCTGCTGCCCCCACCTCGGAGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGCAATGCCATAAGAGGAGCGGTTGCCGTGCAACAGTCCAGGGGCTCGGGTCAGAGCACACGATGTTaGCTCCATCATCCTCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSNAIRGAVAVQQSRGSGQSTRC*LHHPPG Trigger: CCCGGGAGGATGATGGAGCAAACATCGTGTGCTCTG...ACCCGAGCCCCTGGACTGTTGCACGGCAACCGCTCCTCTTATGGCATTGCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS CCA 90 bp | CCGTTGGGATCTTCCTGGATTCGTGTTTGGTCCCCGTGGAGTTCTTaGTCACCTTTCCTCCAGGTGAGCTGGGCTGCAGGTTTGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLGSSWIRVWSPWSS*SPFLQVSWAAGLLP Trigger: TGGGAGCAAACCTGCAGCCCAGCTCACCTGGAGGAAAGGTGACCAAGAACTCCACGGGGACCAAACACGAATCCAGGAAGATCCCAACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGTGCTAGAGTGTATGAGGGACTGGAGACTGGAGGCCTGTCAAGGCTCTGTTCGGCCAGCGCCACATaGCTGATGCTGATGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MGARVYEGLETGGLSRLCSASAT*LMLMLS Trigger: GCTCAGCATCAGCATCAGCAATGTGGCGCTGGCCGA...ACAGAGCCTTGACAGGCCTCCAGTCTCCAGTCCCTCATACACTCTAGCACCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
||
| CDS-3UTR CAA 90 bp | GTTGCTGAGCAATGCCATAAGAGGAGCGGTTGCCGTGCAACAGTCCAGGGGCTCAGCTGCCCATGTTGCTaGTGGCTGTACAGCCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: VAEQCHKRSGCRATVQGLSCPCC*WLYSHK Trigger: CTTATGGCTGTACAGCCACAAGCAACATGGGCAGCT...GAGCCCCTGGACTGTTGCACGGCAACCGCTCCTCTTATGGCATTGCTCAGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAGGAACACGGTGAAGCCCTGGGTTCTTGTGTGGCTGCATGCTATCTTCAGACAGTGACAAGGGACTaGGCGGTTCGCACAGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: WEEHGEALGSCVAACYLQTVTRD*AVRTGI Trigger: TATGCCTGTGCGAACCGCCAAGTCCCTTGTCACTGT...CTGAAGATAGCATGCAGCCACACAAGAACCCAGGGCTTCACCGTGTTCCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
||
| CDS-3UTR CAA 90 bp | TGCCTCTTCCACAGCTGCTGGAGCTGGGAGAGAAGACTGAGCCCTACTGTCCCCATGAAATATTCCTTCTaGTCATCCCCGCCTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLFHSCWSWERRLSPTVPMKYSF*SSPPDC Trigger: GCAGTCAGGCGGGGATGACAAGAAGGAATATTTCAT...GGGGACAGTAGGGCTCAGTCTTCTCTCCCAGCTCCAGCAGCTGTGGAAGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS-3UTR CAA 90 bp | AATATTCTCTGGAAAGCAAAGGACTCAGACACTCTCTGTCCCTCGATTCCACATTCGTCCTGGGAAAGATaGGCCCCGCCGGGCGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: NILWKAKDSDTLCPSIPHSSWER*APPGAQ Trigger: CTGGGCGCCCGGCGGGGCCAATCTTTCCCAGGACGA...ATGTGGAATCGAGGGACAGAGAGTGTCTGAGTCCTTTGCTTTCCAGAGAATATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| CDS CCA 90 bp | AATCCCTCCAATGATGGCGTGGTAGGTACTGGAGGACGAGGGCACTaGACTGGGGTCGTTGACATTGAGGGTGAAGTAGGCTGTATAGCT | + |
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Preference number: 5 (lower is better) Translates to: NPSNDGVVGTGGRGH*TGVVDIEGEVGCIA Trigger: AGCTATACAGCCTACTTCACCCTCAATGTCAACGACCCCAGTCCAGTGCCCTCGTCCTCCAGTACCTACCACGCCATCATTGGAGGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS-3UTR CAA 90 bp | GAGGTCCAGGGAAAGGTGGCGAATGCATGGTATTTCAGAGAGGGTCAAAATGCATGCCCGCCTTCTGCGTaGATGATGGCCGTATCCGCA | + |
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Preference number: 5 (lower is better) Translates to: EVQGKVANAWYFREGQNACPPSA*MMAVSA Trigger: TGCGGATACGGCCATCATCAACGCAGAAGGCGGGCA...TGCATTTTGACCCTCTCTGAAATACCATGCATTCGCCACCTTTCCCTGGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| CDS-3UTR CAA 90 bp | ACACAGGGTGGAGGAGTAGTTGCTGAGCAATGCCATAAGAGGAGCGGTTGCCGTGTGAAGGTTTTCCCGTaGGGATCTTCCTGGATTCGT | + |
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Preference number: 5 (lower is better) Translates to: TQGGGVVAEQCHKRSGCRVKVFP*GSSWIR Trigger: ACGAATCCAGGAAGATCCCAACGGGAAAACCTTCAC...ACGGCAACCGCTCCTCTTATGGCATTGCTCAGCAACTACTCCTCCACCCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CCA 90 bp | TTCACAGAGCACACGATGTTTGCTCCATCATCCTCCCGGGTAACCTaGAATGACACTGAGCTGCTCACAGTGAAGGTTTTCCCGTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: FTEHTMFAPSSSRVT*NDTELLTVKVFPLG Trigger: TCCCAACGGGAAAACCTTCACTGTGAGCAGCTCAGTGTCATTCCAGGTTACCCGGGAGGATGATGGAGCAAACATCGTGTGCTCTGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS TCA 90 bp | TTGCTGATGCTGATGCTGAGCTCATGGGGAGTAGAGCTAACCAGCTaGATCCGATTATCTCGAAGGGCTCTCTTCTCCCCGAAGTATAGG | + |
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Preference number: 5 (lower is better) Translates to: LLMLMLSSWGVELTS*IRLSRRALFSPKYR Trigger: CCTATACTTCGGGGAGAAGAGAGCCCTTCGAGATAATCGGATTCAGCTGGTTAGCTCTACTCCCCATGAGCTCAGCATCAGCATCAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS TCA 90 bp | CCACGCCCCTCACAATGTAACAACAGCTTCTGGCCTTCTCGAGGATaGGCAGGTTCTGGCCTAATCATGGCTGTTGGTGTGTATAACACT | + |
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Preference number: 5 (lower is better) Translates to: PRPSQCNNSFWPSRG*AGSGLIMAVGVYNT Trigger: AGTGTTATACACACCAACAGCCATGATTAGGCCAGAACCTGCTCATCCTCGAGAAGGCCAGAAGCTGTTGTTACATTGTGAGGGGCGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS TCA 90 bp | CGATTATCTCGAAGGGCTCTCTTCTCCCCGAAGTATAGGGTCTGCTaGGCAGGGTTAGACCACTGCAGAGATGAGTCTTCATGGTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: RLSRRALFSPKYRVC*AGLDHCRDESSWSF Trigger: AAAAGACCATGAAGACTCATCTCTGCAGTGGTCTAACCCTGCTCAGCAGACCCTATACTTCGGGGAGAAGAGAGCCCTTCGAGATAATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS-3UTR CAA 90 bp | TTTCTAATCCCTCCAACTTCCTCCTCTGAACATTACAGATTCGTTGCTCTCCTTGTCCCCGTGGAGTTCTaGGTCACCTTTCCTCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: FLIPPTSSSEHYRFVALLVPVEF*VTFPPG Trigger: ACCTGGAGGAAAGGTGACCAAGAACTCCACGGGGAC...AAGGAGAGCAACGAATCTGTAATGTTCAGAGGAGGAAGTTGGAGGGATTAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS-3UTR CAA 90 bp | TTTCTAATCCCTCCAACTTCCTCCTCTGAACATTACAGATTCGTTGCTCTCCTTCAGAGCACACGATGTTaGCTCCATCATCCTCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: FLIPPTSSSEHYRFVALLQSTRC*LHHPPG Trigger: CCCGGGAGGATGATGGAGCAAACATCGTGTGCTCTG...AAGGAGAGCAACGAATCTGTAATGTTCAGAGGAGGAAGTTGGAGGGATTAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS TCA 90 bp | GCAGGGTTAGACCACTGCAGAGATGAGTCTTCATGGTCTTTTACTTaGCACTTGAGAACCACTGTGCCACCAGCCACAACTGTTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: AGLDHCRDESSWSFT*HLRTTVPPATTVSS Trigger: TGATGAAACAGTTGTGGCTGGTGGCACAGTGGTTCTCAAGTGTCAAGTAAAAGACCATGAAGACTCATCTCTGCAGTGGTCTAACCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS-3UTR CAA 90 bp | GGTGTGTGTGTGTATATATATATATATTCAGAGTCACACTCAGGAAGCTCAACCAGCTGCCCATGTTGCTaGTGGCTGTACAGCCATAAG | + |
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Preference number: 5 (lower is better) Translates to: GVCVYIYIYSESHSGSSTSCPCC*WLYSHK Trigger: CTTATGGCTGTACAGCCACAAGCAACATGGGCAGCT...GGTTGAGCTTCCTGAGTGTGACTCTGAATATATATATATATACACACACACACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| CDS-3UTR CAA 90 bp | TCTCTGGCCAGGAGAAATACAGGATACATGTTCAATATGTGGGTTCCCATTAACATGAAATATTCCTTCTaGTCATCCCCGCCTGACTGC | + |
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Preference number: 5 (lower is better) Translates to: SLARRNTGYMFNMWVPINMKYSF*SSPPDC Trigger: GCAGTCAGGCGGGGATGACAAGAAGGAATATTTCAT...GTTAATGGGAACCCACATATTGAACATGTATCCTGTATTTCTCCTGGCCAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| CDS CCA 72 bp | AATCCTGCTCCTGCCAGTAGCCGTCCTGGGAAAGATTaGCCCCGCCGGGCGCCCAGGAGCAGGCGAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: NPAPASSRPGKD*PRRAPRSRRGA Trigger: TGCTCCTCGCCTGCTCCTGGGCGCCCGGCGGGGCCAATCTTTCCCAGGACGGCTACTGGCAGGAGCAGGATT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005470.5 |
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| CDS CCA 72 bp | CAGATGTCCAGGGCTGGCTATCGTCCTGGGAAAGATTaGCCCCGCCGGGCGCCCAGGAGCAGGCGAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: QMSRAGYRPGKD*PRRAPRSRRGA Trigger: TGCTCCTCGCCTGCTCCTGGGCGCCCGGCGGGGCCAATCTTTCCCAGGACGATAGCCAGCCCTGGACATCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| CDS CAA 72 bp | TCAGATGTCCAGGGCTGGCTATCGTCCTGGGAAAGATaGGCCCCGCCGGGCGCCCAGGAGCAGGCGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SDVQGWLSSWER*APPGAQEQARS Trigger: GCTCCTCGCCTGCTCCTGGGCGCCCGGCGGGGCCAATCTTTCCCAGGACGATAGCCAGCCCTGGACATCTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111220.8 |
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| CDS CCA 72 bp | CCCGCCTTCTGCGTTGATGATGGCCGTATCCGCATCTaGAGCATCGTCGGAACCCTTCGCTTCGTGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PAFCVDDGRIRI*SIVGTLRFVCQ Trigger: CTGACACACGAAGCGAAGGGTTCCGACGATGCTCCAGATGCGGATACGGCCATCATCAACGCAGAAGGCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CAA 72 bp | GAGCACGTGTACTCCCCCTCATCGGCCAGCGCCACATaGCTGATGCTGATGCTGAGCTCATGGGGAGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: EHVYSPSSASAT*LMLMLSSWGVE Trigger: CTCTACTCCCCATGAGCTCAGCATCAGCATCAGCAATGTGGCGCTGGCCGATGAGGGGGAGTACACGTGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CAA 90 bp | CCCGTTGGGATCTTCCTGGATTCGTGTTTGGTCCCCGTGGAGTTCTaGGTCACCTTTCCTCCAGGTGAGCTGGGCTGCAGGTTTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: PVGIFLDSCLVPVEF*VTFPPGELGCRFAP Trigger: GGGAGCAAACCTGCAGCCCAGCTCACCTGGAGGAAAGGTGACCAAGAACTCCACGGGGACCAAACACGAATCCAGGAAGATCCCAACGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CAA 90 bp | GTGAAGATGGAGCACGTGTACTCCCCCTCATCGGCCAGCGCCACATaGCTGATGCTGATGCTGAGCTCATGGGGAGTAGAGCTAACCAGC | + |
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Preference number: 6 (lower is better) Translates to: VKMEHVYSPSSASAT*LMLMLSSWGVELTS Trigger: GCTGGTTAGCTCTACTCCCCATGAGCTCAGCATCAGCATCAGCAATGTGGCGCTGGCCGATGAGGGGGAGTACACGTGCTCCATCTTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CCA 72 bp | GGTGGCTCACTGCCTTCCTTTACCCACACGTACTGCTaGGGGACTGGATTGCCACGCCCCTCACAATGTAAC | + |
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Preference number: 6 (lower is better) Translates to: GGSLPSFTHTYC*GTGLPRPSQCN Trigger: GTTACATTGTGAGGGGCGTGGCAATCCAGTCCCCCAGCAGTACGTGTGGGTAAAGGAAGGCAGTGAGCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CCA 72 bp | TCTTCCTGGATTCGTGTTTGGTCCCCGTGGAGTTCTTaGTCACCTTTCCTCCAGGTGAGCTGGGCTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: SSWIRVWSPWSS*SPFLQVSWAAG Trigger: ACCTGCAGCCCAGCTCACCTGGAGGAAAGGTGACCAAGAACTCCACGGGGACCAAACACGAATCCAGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CCA 72 bp | AATGATGGCGTGGTAGGTACTGGAGGACGAGGGCACTaGACTGGGGTCGTTGACATTGAGGGTGAAGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: NDGVVGTGGRGH*TGVVDIEGEVG Trigger: GCCTACTTCACCCTCAATGTCAACGACCCCAGTCCAGTGCCCTCGTCCTCCAGTACCTACCACGCCATCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CAA 90 bp | AAATATTCCTTCTTGTCATCCCCGCCTGACTGCCCGCCTTCTGCGTaGATGATGGCCGTATCCGCATCTGGAGCATCGTCGGAACCCTTC | + |
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Preference number: 6 (lower is better) Translates to: KYSFLSSPPDCPPSA*MMAVSASGASSEPF Trigger: GAAGGGTTCCGACGATGCTCCAGATGCGGATACGGCCATCATCAACGCAGAAGGCGGGCAGTCAGGCGGGGATGACAAGAAGGAATATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS GCA 72 bp | CTTCCTTTACCCACACGTACTGCTGGGGGACTGGATTaGCACGCCCCTCACAATGTAACAACAGCTTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LPLPTRTAGGLD*HAPHNVTTASG Trigger: GCCAGAAGCTGTTGTTACATTGTGAGGGGCGTGGCAATCCAGTCCCCCAGCAGTACGTGTGGGTAAAGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CAA 72 bp | GGTTTCTGTGGGATTCCGAGCACAGTGACAAGGGACTaGGCGGTTCGCACAGGCATAGTGAAGATGGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: GFCGIPSTVTRD*AVRTGIVKMEH Trigger: GTGCTCCATCTTCACTATGCCTGTGCGAACCGCCAAGTCCCTTGTCACTGTGCTCGGAATCCCACAGAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CAA 72 bp | CCTTCCTTTACCCACACGTACTGCTGGGGGACTGGATaGCCACGCCCCTCACAATGTAACAACAGCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: PSFTHTYCWGTG*PRPSQCNNSFW Trigger: CCAGAAGCTGTTGTTACATTGTGAGGGGCGTGGCAATCCAGTCCCCCAGCAGTACGTGTGGGTAAAGGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS TCA 72 bp | CGAAGGGCTCTCTTCTCCCCGAAGTATAGGGTCTGCTaGGCAGGGTTAGACCACTGCAGAGATGAGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RRALFSPKYRVC*AGLDHCRDESS Trigger: TGAAGACTCATCTCTGCAGTGGTCTAACCCTGCTCAGCAGACCCTATACTTCGGGGAGAAGAGAGCCCTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS TCA 72 bp | CTGATGCTGAGCTCATGGGGAGTAGAGCTAACCAGCTaGATCCGATTATCTCGAAGGGCTCTCTTCTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: LMLSSWGVELTS*IRLSRRALFSP Trigger: CGGGGAGAAGAGAGCCCTTCGAGATAATCGGATTCAGCTGGTTAGCTCTACTCCCCATGAGCTCAGCATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CAA 90 bp | GTGATTATGGGTTTCTGTGGGATTCCGAGCACAGTGACAAGGGACTaGGCGGTTCGCACAGGCATAGTGAAGATGGAGCACGTGTACTCC | + |
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Preference number: 6 (lower is better) Translates to: VIMGFCGIPSTVTRD*AVRTGIVKMEHVYS Trigger: GGAGTACACGTGCTCCATCTTCACTATGCCTGTGCGAACCGCCAAGTCCCTTGTCACTGTGCTCGGAATCCCACAGAAACCCATAATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CCA 72 bp | CTGCTCACAGTGAAGGTTTTCCCGTTGGGATCTTCCTaGATTCGTGTTTGGTCCCCGTGGAGTTCTTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: LLTVKVFPLGSS*IRVWSPWSSWS Trigger: TGACCAAGAACTCCACGGGGACCAAACACGAATCCAGGAAGATCCCAACGGGAAAACCTTCACTGTGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CAA 72 bp | AATGACACTGAGCTGCTCACAGTGAAGGTTTTCCCGTaGGGATCTTCCTGGATTCGTGTTTGGTCCCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: NDTELLTVKVFP*GSSWIRVWSPW Trigger: CCACGGGGACCAAACACGAATCCAGGAAGATCCCAACGGGAAAACCTTCACTGTGAGCAGCTCAGTGTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CAA 90 bp | GTAACCTGGAATGACACTGAGCTGCTCACAGTGAAGGTTTTCCCGTaGGGATCTTCCTGGATTCGTGTTTGGTCCCCGTGGAGTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VTWNDTELLTVKVFP*GSSWIRVWSPWSSW Trigger: CCAAGAACTCCACGGGGACCAAACACGAATCCAGGAAGATCCCAACGGGAAAACCTTCACTGTGAGCAGCTCAGTGTCATTCCAGGTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CCA 72 bp | CACACGATGTTTGCTCCATCATCCTCCCGGGTAACCTaGAATGACACTGAGCTGCTCACAGTGAAGGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: HTMFAPSSSRVT*NDTELLTVKVF Trigger: GAAAACCTTCACTGTGAGCAGCTCAGTGTCATTCCAGGTTACCCGGGAGGATGATGGAGCAAACATCGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS TCA 72 bp | TCACAATGTAACAACAGCTTCTGGCCTTCTCGAGGATaGGCAGGTTCTGGCCTAATCATGGCTGTTGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SQCNNSFWPSRG*AGSGLIMAVGV Trigger: CACACCAACAGCCATGATTAGGCCAGAACCTGCTCATCCTCGAGAAGGCCAGAAGCTGTTGTTACATTGTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS TCA 72 bp | ATCATGGCTGTTGGTGTGTATAACACTTCAATGCGCTaGGAAGTGGATCTGTCGGCTCCCTTCAGAGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: IMAVGVYNTSMR*EVDLSAPFRDS Trigger: TGAATCTCTGAAGGGAGCCGACAGATCCACTTCTCAGCGCATTGAAGTGTTATACACACCAACAGCCATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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| CDS CCA 72 bp | CTGTTGGTGTGTATAACACTTCAATGCGCTGAGAAGTaGATCTGTCGGCTCCCTTCAGAGATTCATGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: LLVCITLQCAEK*ICRLPSEIHGS Trigger: TGAACCATGAATCTCTGAAGGGAGCCGACAGATCCACTTCTCAGCGCATTGAAGTGTTATACACACCAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005470.5 ENSMUST00000111220.8 |
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