Pregenerated sensors for CADM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032076Ensembl transcript IDs: ENSMUST00000034581.4, ENSMUST00000085909.9, ENSMUST00000114547.8, ENSMUST00000114548.8, ENSMUST00000143026.9, ENSMUST00000152459.8, ENSMUST00000214542.2, ENSMUST00000239368.2
Found 425 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGGCACTGATAGCCGCCTTCTGTCTCTGGGGCACCCAGGCTGGTaGGGTGAGTCTCAGCTCACCTCGGCTGGCTTTCCTGGGACTTCT | + |
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Preference number: 1 (lower is better) Translates to: EGTDSRLLSLGHPGW*GESQLTSAGFPGTS Trigger: AGAAGTCCCAGGAAAGCCAGCCGAGGTGAGCTGAGACTCACCTCACCAGCCTGGGTGCCCCAGAGACAGAAGGCGGCTATCAGTGCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR CCA 90 bp | TTCCAACCCTATGCTGAGAGGGCACTGATAGCCGCCTTCTGTCTCTaGGGCACCCAGGCTGGTGAGGTGAGTCTCAGCTCACCTCGGCTG | + |
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Preference number: 1 (lower is better) Translates to: FQPYAERALIAAFCL*GTQAGEVSLSSPRL Trigger: CAGCCGAGGTGAGCTGAGACTCACCTCACCAGCCTGGGTGCCCCAGAGACAGAAGGCGGCTATCAGTGCCCTCTCAGCATAGGGTTGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR CCA 90 bp | GCGAGTGCTGAGACAAAGGGCTCCAGAGGCAGAGACTTGCGGGTGTaGATAGAAACCAACCAGGAAAACAGAATTCAAGAGGGCCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: ASAETKGSRGRDLRV*IETNQENRIQEGLL Trigger: GAGCAGGCCCTCTTGAATTCTGTTTTCCTGGTTGGTTTCTATCCACACCCGCAAGTCTCTGCCTCTGGAGCCCTTTGTCTCAGCACTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR TCA 90 bp | GAATTCAAGAGGGCCTGCTCCTTTCTGAGCATGAGGCTTTGTAACTaGGGCCAGAAAGGGGGAGAACTGGTGATCTTGGCTGGGTCTAAC | + |
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Preference number: 1 (lower is better) Translates to: EFKRACSFLSMRLCN*GQKGGELVILAGSN Trigger: GTTAGACCCAGCCAAGATCACCAGTTCTCCCCCTTTCTGGCCTCAGTTACAAAGCCTCATGCTCAGAAAGGAGCAGGCCCTCTTGAATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR TCA 90 bp | AACAAAGTAGGCGACGGTCTCTCTCTTACCTACGCAGCACGCATCTaGTCACTTGGCCATGTCGTGGAAACTGATACTTCCACCACCAGC | + |
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Preference number: 1 (lower is better) Translates to: NKVGDGLSLTYAARI*SLGHVVETDTSTTS Trigger: GCTGGTGGTGGAAGTATCAGTTTCCACGACATGGCCAAGTGATCAGATGCGTGCTGCGTAGGTAAGAGAGAGACCGTCGCCTACTTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
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| 3UTR CCA 90 bp | TCTCTCTTACCTACGCAGCACGCATCTGATCACTTGGCCATGTCGTaGAAACTGATACTTCCACCACCAGCCATAAGAGTTCAGACGCCC | + |
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Preference number: 1 (lower is better) Translates to: SLLPTQHASDHLAMS*KLILPPPAIRVQTP Trigger: GGGCGTCTGAACTCTTATGGCTGGTGGTGGAAGTATCAGTTTCCACGACATGGCCAAGTGATCAGATGCGTGCTGCGTAGGTAAGAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
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| 3UTR GCA 90 bp | GCAGACGACAGCGTCTGGGTCACAGTCTACGTTTCTAGTCTTCGCTaGTCTACGTATTTAAGACATGGGCAGCAGCAAAGAGTTTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: ADDSVWVTVYVSSLR*STYLRHGQQQRVFS Trigger: ACTGAAAACTCTTTGCTGCTGCCCATGTCTTAAATACGTAGAGCAGCGAAGACTAGAAACGTAGACTGTGACCCAGACGCTGTCGTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR GCA 90 bp | GTATCTTCTGCCGAGACTCCTGTTTGGTCTTTTCTGGGTTACAGGTaGTATGGTGCAGCACTGTGGGCTTCTGAAGCTGTGATTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: VSSAETPVWSFLGYR*YGAALWASEAVISS Trigger: AGAAGAAATCACAGCTTCAGAAGCCCACAGTGCTGCACCATAGCACCTGTAACCCAGAAAAGACCAAACAGGAGTCTCGGCAGAAGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
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| 3UTR CCA 90 bp | AAAAACCCTTTCAACGACATGCTAACTGGTTGTCACCCTTTGATATaGTCACTATGGTCAGGATGGGTGCTAAGGGCTCGGAATAGATGC | + |
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Preference number: 1 (lower is better) Translates to: KNPFNDMLTGCHPLI*SLWSGWVLRARNRC Trigger: GCATCTATTCCGAGCCCTTAGCACCCATCCTGACCATAGTGACCATATCAAAGGGTGACAACCAGTTAGCATGTCGTTGAAAGGGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR TCA 90 bp | TGGGTTACAGGTGCTATGGTGCAGCACTGTGGGCTTCTGAAGCTGTaGTTTCTTCTTGACATGGCAATTTTAAACCAGAAGAGAAAGACC | + |
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Preference number: 1 (lower is better) Translates to: WVTGAMVQHCGLLKL*FLLDMAILNQKRKT Trigger: GGTCTTTCTCTTCTGGTTTAAAATTGCCATGTCAAGAAGAAATCACAGCTTCAGAAGCCCACAGTGCTGCACCATAGCACCTGTAACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
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| 3UTR CCA 90 bp | CACACGGACTTGCTCTCTCCTGCATTAGTGAGCAGTAAGGCCAATTaGGAAAGGTGGATGGAATTGTTGAGAGTAGAAATAATCAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: HTDLLSPALVSSKAN*ERWMELLRVEIIRA Trigger: TGCTCTGATTATTTCTACTCTCAACAATTCCATCCACCTTTCCCAATTGGCCTTACTGCTCACTAATGCAGGAGAGAGCAAGTCCGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR CCA 90 bp | TTAAGTAACTGGAAATCCCTATATGCCACTTTCCCACCTCGACTCTaGGCTCTGACCTTTCCAGAACAAAATTGGCCCTTCTTTTGTACC | + |
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Preference number: 1 (lower is better) Translates to: LSNWKSLYATFPPRL*ALTFPEQNWPFFCT Trigger: GGTACAAAAGAAGGGCCAATTTTGTTCTGGAAAGGTCAGAGCCCAGAGTCGAGGTGGGAAAGTGGCATATAGGGATTTCCAGTTACTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR CCA 90 bp | CATGGTGAAATTTCAGTGCTTGGAGAAAGTTTGTTCTTTAAGCGTTaGGTTCTTAGCAAGATGGATGGGCTGCTCCTGTTGGGAGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: HGEISVLGESLFFKR*VLSKMDGLLLLGEV Trigger: GACTTCTCCCAACAGGAGCAGCCCATCCATCTTGCTAAGAACCCAACGCTTAAAGAACAAACTTTCTCCAAGCACTGAAATTTCACCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
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| 3UTR GCA 90 bp | GTTGAGAGTAGAAATAATCAGAGCAGAACTGTCGTACCCCCTCCCTaGTTCCCCTCCTGTGACATCTCAAATTTGTCCACTTACATAAAA | + |
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Preference number: 1 (lower is better) Translates to: VESRNNQSRTVVPPP*FPSCDISNLSTYIK Trigger: TTTTATGTAAGTGGACAAATTTGAGATGTCACAGGAGGGGAAGCAGGGAGGGGGTACGACAGTTCTGCTCTGATTATTTCTACTCTCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR GCA 90 bp | TTCACGGAAACTTATTTTAGTAGCTATGCGCTCTGGCTGCCATCATaGGAGATGAGTAGTTTTTGGCAGATGGTTCTTAAGGCTGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: FTETYFSSYALWLPS*EMSSFWQMVLKAEV Trigger: TACCTCAGCCTTAAGAACCATCTGCCAAAAACTACTCATCTCGCATGATGGCAGCCAGAGCGCATAGCTACTAAAATAAGTTTCCGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR CCA 90 bp | GCACCAGAGGAGGACTTGGCAGTGCATAATTTTAAACATACAGATTaGCCTCAACCCAGTGGGCCTTTTCAATTCAACACAACCAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: APEEDLAVHNFKHTD*PQPSGPFQFNTTKN Trigger: ATTCTTGGTTGTGTTGAATTGAAAAGGCCCACTGGGTTGAGGCCAATCTGTATGTTTAAAATTATGCACTGCCAAGTCCTCCTCTGGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
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| 3UTR TCA 90 bp | TGCTATGGTGCAGCACTGTGGGCTTCTGAAGCTGTGATTTCTTCTTaGCATGGCAATTTTAAACCAGAAGAGAAAGACCCCAAAGAATCA | + |
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Preference number: 1 (lower is better) Translates to: CYGAALWASEAVISS*HGNFKPEEKDPKES Trigger: TGATTCTTTGGGGTCTTTCTCTTCTGGTTTAAAATTGCCATGTCAAGAAGAAATCACAGCTTCAGAAGCCCACAGTGCTGCACCATAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
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| 3UTR GCA 90 bp | CTGAGACATGTCAACATTGTAAGCCATAAAGTTACATCAGAACACTaGACTACTGTACACTTGTCAAAACAGAAAGATGGGCGGTCCCGA | + |
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Preference number: 1 (lower is better) Translates to: LRHVNIVSHKVTSEH*TTVHLSKQKDGRSR Trigger: TCGGGACCGCCCATCTTTCTGTTTTGACAAGTGTACAGTAGTGCAGTGTTCTGATGTAACTTTATGGCTTACAATGTTGACATGTCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR CCA 90 bp | GGTATACATGAACCGATACAAAATGCGAATGGGAACACACGGATGTaGAGTTTCTTACACTGTAACATGGTCCTTGTACACCTTAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: GIHEPIQNANGNTRM*SFLHCNMVLVHLRN Trigger: GTTTCTAAGGTGTACAAGGACCATGTTACAGTGTAAGAAACTCCACATCCGTGTGTTCCCATTCGCATTTTGTATCGGTTCATGTATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR GCA 90 bp | CCCAAAGAATCAGAATCAGTCAGAAATCCTAGCCATTTCCATAAGTaGAAAAATCAAGTATACCTAAAAAGGTTCCTTGGTTCGATTCAT | + |
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Preference number: 1 (lower is better) Translates to: PKESESVRNPSHFHK*KNQVYLKRFLGSIH Trigger: ATGAATCGAACCAAGGAACCTTTTTAGGTATACTTGATTTTTGCACTTATGGAAATGGCTAGGATTTCTGACTGATTCTGATTCTTTGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
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| 3UTR TCA 90 bp | GATGCATTTTATGAAGCAGAGAATATTTCTCAAAAGGAAACACTGTaGCTGAACAGTCAGTGGGAAATTACTTCTTGGTTCTTCTATTCA | + |
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Preference number: 1 (lower is better) Translates to: DAFYEAENISQKETL*LNSQWEITSWFFYS Trigger: TGAATAGAAGAACCAAGAAGTAATTTCCCACTGACTGTTCAGTCACAGTGTTTCCTTTTGAGAAATATTCTCTGCTTCATAAAATGCATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
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| 3UTR-3UTR TCA 90 bp | GGCACCCAGGCTGGTGAGGTGAGTCTCAGCTCACCTCGGCTGGCTTTCCTGGGACATCAAGAACAGCTGTaGGCAGCAGCAATGGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GTQAGEVSLSSPRLAFLGHQEQL*AAAMGF Trigger: AAAGCCCATTGCTGCTGCTCACAGCTGTTCTTGATG...TCCCAGGAAAGCCAGCCGAGGTGAGCTGAGACTCACCTCACCAGCCTGGGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR-3UTR TCA 90 bp | ATTTTCCCAGTATTTGAAGCCTCTCCCTTCTGGGCTGCCCAAGGGAACGTCCATGGGCACCCAGGCTGGTaGGGTGAGTCTCAGCTCACC | + |
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Preference number: 2 (lower is better) Translates to: IFPVFEASPFWAAQGNVHGHPGW*GESQLT Trigger: GGTGAGCTGAGACTCACCTCACCAGCCTGGGTGCCC...ATGGACGTTCCCTTGGGCAGCCCAGAAGGGAGAGGCTTCAAATACTGGGAAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR-3UTR CCA 90 bp | GGCACCCAGGCTGGTGAGGTGAGTCTCAGCTCACCTCGGCTGGCTTTCCTGGGATCCTTCTCGAGGCTTTaGTGTCTCTGCAAGGAAATC | + |
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Preference number: 2 (lower is better) Translates to: GTQAGEVSLSSPRLAFLGSFSRL*CLCKEI Trigger: GATTTCCTTGCAGAGACACCAAAGCCTCGAGAAGGA...TCCCAGGAAAGCCAGCCGAGGTGAGCTGAGACTCACCTCACCAGCCTGGGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCTGCCCAAGGGAACGTCCATCCCAGAGACTTCTAACTAAGGGCTGCCTGTCAGCTCACCTCGGCTaGCTTTCCTGGGACTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LGCPRERPSQRLLTKGCLSAHLG*LSWDFF Trigger: AAAGAAGTCCCAGGAAAGCCAGCCGAGGTGAGCTGA...CAGGCAGCCCTTAGTTAGAAGTCTCTGGGATGGACGTTCCCTTGGGCAGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCTTTCCTGGGACTTCTTTTCCACATCGCAGCATCTTTTCTGTCCATGTGGCTGCAGGCGAGTGCTaGGACAAAGGGCTCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: AGFPGTSFPHRSIFSVHVAAGEC*DKGLQR Trigger: CCTCTGGAGCCCTTTGTCTCAGCACTCGCCTGCAGC...CACATGGACAGAAAAGATGCTGCGATGTGGAAAAGAAGTCCCAGGAAAGCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR-3UTR TCA 90 bp | GCTCACCTCGGCTGGCTTTCCTGGGACTTCTTTTCCACATCGCAGCATCTTTTCAAGGGGGAGAACTGGTaGTCTTGGCTGGGTCTAACG | + |
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Preference number: 2 (lower is better) Translates to: AHLGWLSWDFFSTSQHLFKGENW*SWLGLT Trigger: CGTTAGACCCAGCCAAGATCACCAGTTCTCCCCCTT...GAAAAGATGCTGCGATGTGGAAAAGAAGTCCCAGGAAAGCCAGCCGAGGTGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGAGCTGGGAATCCCAGCAGGACAAGTGTCCCAGCAGGACGGTGTCTGTACAGATTCAATCTCATTaGGACACACCTCACTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GGSWESQQDKCPSRTVSVQIQSH*DTPHLQ Trigger: CTGCAAGTGAGGTGTGTCGCAATGAGATTGAATCTG...TACAGACACCGTCCTGCTGGGACACTTGTCCTGCTGGGATTCCCAGCTCCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR CCA 90 bp | AAATCCCTATATGCCACTTTCCCACCTCGACTCTGGGCTCTGACCTTTCCAGAAGTTGGGGGTGGGAGCTaGGAATCCCAGCAGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: KSLYATFPPRLWALTFPEVGGGS*ESQQDK Trigger: CTTGTCCTGCTGGGATTCCCAGCTCCCACCCCCAAC...TTCTGGAAAGGTCAGAGCCCAGAGTCGAGGTGGGAAAGTGGCATATAGGGATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR CCA 90 bp | AACTATGCCTTCTTGGCATTCCTGATTGGCCACATGGGTAAGGAAGGATTCCAAGCCGCCTTCTGTCTCTaGGGCACCCAGGCTGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: NYAFLAFLIGHMGKEGFQAAFCL*GTQAGE Trigger: CTCACCAGCCTGGGTGCCCCAGAGACAGAAGGCGGC...TTGGAATCCTTCCTTACCCATGTGGCCAATCAGGAATGCCAAGAAGGCATAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR CAA 90 bp | CTAAACAAAGCCTGTCCCCTCCAGTCAGTCACACGGCACACGGACTaGCTCTCTCCTGCATTAGTGAGCAGTAAGGCCAATTGGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LNKACPLQSVTRHTD*LSPALVSSKANWER Trigger: CCTTTCCCAATTGGCCTTACTGCTCACTAATGCAGGAGAGAGCAAGTCCGTGTGCCGTGTGACTGACTGGAGGGGACAGGCTTTGTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR CAA 90 bp | TGGCTGCAGGCGAGTGCTGAGACAAAGGGCTCCAGAGGCAGAGACTaGCGGGTGTGGATAGAAACCAACCAGGAAAACAGAATTCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: WLQASAETKGSRGRD*RVWIETNQENRIQE Trigger: CTCTTGAATTCTGTTTTCCTGGTTGGTTTCTATCCACACCCGCAAGTCTCTGCCTCTGGAGCCCTTTGTCTCAGCACTCGCCTGCAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR-3UTR CCA 90 bp | GAGTTGGGGGTGGGAGCTGGGAATCCCAGCAGGACAAGTGTCCCAGCAGGACGGTACGTATTTAAGACATaGGCAGCAGCAAAGAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: ELGVGAGNPSRTSVPAGRYVFKT*AAAKSF Trigger: AAAACTCTTTGCTGCTGCCCATGTCTTAAATACGTA...CCGTCCTGCTGGGACACTTGTCCTGCTGGGATTCCCAGCTCCCACCCCCAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR CCA 90 bp | TGCGAGATGAGTAGTTTTTGGCAGATGGTTCTTAAGGCTGAGGTAAGAGGCCAGGAGAGGAGTTGGGGGTaGGAGCTGGGAATCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: CEMSSFWQMVLKAEVRGQERSWG*ELGIPA Trigger: TGCTGGGATTCCCAGCTCCCACCCCCAACTCCTCTC...CTGGCCTCTTACCTCAGCCTTAAGAACCATCTGCCAAAAACTACTCATCTCGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTTAAGCGTTGGGTTCTTAGCAAGATGGATGGGCTGCTCCTGTTGGGAGAAGAACTGTCCAGGAAGCTaGGCTGTGAGCCATGTGACC | + |
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Preference number: 2 (lower is better) Translates to: SLSVGFLARWMGCSCWEKNCPGS*AVSHVT Trigger: GGTCACATGGCTCACAGCTCAGCTTCCTGGACAGTT...CTTCTCCCAACAGGAGCAGCCCATCCATCTTGCTAAGAACCCAACGCTTAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAAACACCAATTGAAACACGTTGGGGGTGGGAGCTaGGAATCCCAGCAGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: VGPTLCNLPETEKHQLKHVGGGS*ESQQDK Trigger: CTTGTCCTGCTGGGATTCCCAGCTCCCACCCCCAAC...GTGTTTCAATTGGTGTTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR CCA 90 bp | CGACTCTGGGCTCTGACCTTTCCAGAACAAAATTGGCCCTTCTTTTGTACCTCCAGGAATGAGAGGAGTTaGGGGTGGGAGCTGGGAATC | + |
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Preference number: 2 (lower is better) Translates to: RLWALTFPEQNWPFFCTSRNERS*GWELGI Trigger: GATTCCCAGCTCCCACCCCCAACTCCTCTCATTCCT...GGAGGTACAAAAGAAGGGCCAATTTTGTTCTGGAAAGGTCAGAGCCCAGAGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGCTGCCATCATGCGAGATGAGTAGTTTTTGGCAGATGGTTCTTAAGGCTAGGAATGAGAGGAGTTaGGGGTGGGAGCTGGGAATC | + |
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Preference number: 2 (lower is better) Translates to: LWLPSCEMSSFWQMVLKARNERS*GWELGI Trigger: GATTCCCAGCTCCCACCCCCAACTCCTCTCATTCCT...AGCCTTAAGAACCATCTGCCAAAAACTACTCATCTCGCATGATGGCAGCCAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTGTCCATGTGTGGAGATACTGTTTCTTCTCTCAGGTGGCTGCAGGCGAGAGCAGCAATGGGCTTTaGCAGCGAAGCAGGAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: FSVHVWRYCFFSQVAAGESSNGL*QRSRSK Trigger: TTTGCTCCTGCTTCGCTGCCAAAGCCCATTGCTGCT...CTCGCCTGCAGCCACCTGAGAGAAGAAACAGTATCTCCACACATGGACAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR-3UTR TCA 90 bp | TGCGAGATGAGTAGTTTTTGGCAGATGGTTCTTAAGGCTGAGGTAAGAGGCCAGCCAAATCTGAAGGAATaGGAGGAGTTGGGGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: CEMSSFWQMVLKAEVRGQPNLKE*EELGVG Trigger: TCCCACCCCCAACTCCTCTCATTCCTTCAGATTTGG...CTGGCCTCTTACCTCAGCCTTAAGAACCATCTGCCAAAAACTACTCATCTCGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCTTTCCTGGGACTTCTTTTCCACATCGCAGCATCTTTTCTGTCCATGTGATGAGGCTTTGTAACTaGGGCCAGAAAGGGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: AGFPGTSFPHRSIFSVHVMRLCN*GQKGGE Trigger: TTCTCCCCCTTTCTGGCCTCAGTTACAAAGCCTCAT...CACATGGACAGAAAAGATGCTGCGATGTGGAAAAGAAGTCCCAGGAAAGCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCTGTCCCCTCCAGTCAGTCACACGGCACACGGACTTGCTCTCTCCTGCATTGTTTCTAGTCTTCGCTaGTCTACGTATTTAAGACAT | + |
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Preference number: 2 (lower is better) Translates to: SLSPPVSHTAHGLALSCIVSSLR*STYLRH Trigger: ATGTCTTAAATACGTAGAGCAGCGAAGACTAGAAAC...AATGCAGGAGAGAGCAAGTCCGTGTGCCGTGTGACTGACTGGAGGGGACAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTCAGTCACACGGCACACGGACTTGCTCTCTCCTGCATTAGTGAGCAGTAAGCAGATTCAATCTCATTaGGACACACCTCACTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: QSVTRHTDLLSPALVSSKQIQSH*DTPHLQ Trigger: CTGCAAGTGAGGTGTGTCGCAATGAGATTGAATCTG...CTTACTGCTCACTAATGCAGGAGAGAGCAAGTCCGTGTGCCGTGTGACTGACTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCTTTCCTGGGACTTCTTTTCCACATCGCAGCATCTTTTCTGTCCATGTGATTCATGCTCCTAACTaGGACACTATAGCTGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: AGFPGTSFPHRSIFSVHVIHAPN*DTIAAP Trigger: GGGGGCAGCTATAGTGTCGCAGTTAGGAGCATGAAT...CACATGGACAGAAAAGATGCTGCGATGTGGAAAAGAAGTCCCAGGAAAGCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR-3UTR CCA 90 bp | ACGATGAAGGGGGAAAGGCATGGTGAAATTTCAGTGCTTGGAGAAAGTTTGTTCAAATCGGCAGTAGGTTaGCTGGGCGGTTGTCTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: TMKGERHGEISVLGESLFKSAVG*LGGCLA Trigger: CGCCAGACAACCGCCCAGCCAACCTACTGCCGATTT...GAACAAACTTTCTCCAAGCACTGAAATTTCACCATGCCTTTCCCCCTTCATCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
||
| 3UTR-3UTR TCA 90 bp | TACAGATTGGCCTCAACCCAGTGGGCCTTTTCAATTCAACACAACCAAGAATTCAGCTCTCGGCTCTTCTaGGGACTGTCCACCATAGAG | + |
|
Preference number: 2 (lower is better) Translates to: YRLASTQWAFSIQHNQEFSSRLF*GLSTIE Trigger: CTCTATGGTGGACAGTCCTCAGAAGAGCCGAGAGCT...GAATTCTTGGTTGTGTTGAATTGAAAAGGCCCACTGGGTTGAGGCCAATCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
||
| 3UTR CAA 90 bp | CAGCTGAAAAACCCTTTCAACGACATGCTAACTGGTTGTCACCCTTaGATATGGTCACTATGGTCAGGATGGGTGCTAAGGGCTCGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: QLKNPFNDMLTGCHP*IWSLWSGWVLRARN Trigger: ATTCCGAGCCCTTAGCACCCATCCTGACCATAGTGACCATATCAAAGGGTGACAACCAGTTAGCATGTCGTTGAAAGGGTTTTTCAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR CAA 90 bp | GCATTAGTGAGCAGTAAGGCCAATTGGGAAAGGTGGATGGAATTGTaGAGAGTAGAAATAATCAGAGCAGAACTGTCGTACCCCCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: ALVSSKANWERWMEL*RVEIIRAELSYPLP Trigger: AGGGAGGGGGTACGACAGTTCTGCTCTGATTATTTCTACTCTCAACAATTCCATCCACCTTTCCCAATTGGCCTTACTGCTCACTAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR CAA 90 bp | CCTGCATTAGTGAGCAGTAAGGCCAATTGGGAAAGGTGGATGGAATaGTTGAGAGTAGAAATAATCAGAGCAGAACTGTCGTACCCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: PALVSSKANWERWME*LRVEIIRAELSYPL Trigger: GAGGGGGTACGACAGTTCTGCTCTGATTATTTCTACTCTCAACAATTCCATCCACCTTTCCCAATTGGCCTTACTGCTCACTAATGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR GCA 90 bp | ACACACGGATGTGGAGTTTCTTACACTGTAACATGGTCCTTGTACACCTTAGAATTTGTCTTGGTTAAGTaGCTAGGGGCAGGAGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: THGCGVSYTVTWSLYTLEFVLVK*LGAGEG Trigger: CCCCTCTCCTGCCCCTAGGCACTTAACCAAGACAAA...TTCTAAGGTGTACAAGGACCATGTTACAGTGTAAGAAACTCCACATCCGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR GCA 90 bp | CAACCCAGTGGGCCTTTTCAATTCAACACAACCAAGAATTCTGTCAAAGTGAAAGCAAGATGGATGGGCTaGTCCTGTTGGGAGAAGTCG | + |
|
Preference number: 2 (lower is better) Translates to: QPSGPFQFNTTKNSVKVKARWMG*SCWEKS Trigger: CGACTTCTCCCAACAGGAGCAGCCCATCCATCTTGC...TTTCACTTTGACAGAATTCTTGGTTGTGTTGAATTGAAAAGGCCCACTGGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATCTGATCACTTGGCCATGTCGTGGAAACTGATACTTCCACCACCAGCCATATCATCCTGTTCTTCCTaGTTTGTCAGCTTTTGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: ASDHLAMSWKLILPPPAISSCSS*FVSFCG Trigger: TCCACAAAAGCTGACAAAGCAGGAAGAACAGGATGA...TATGGCTGGTGGTGGAAGTATCAGTTTCCACGACATGGCCAAGTGATCAGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTCGACTCTGGGCTCTGACCTTTCCAGAACAAAATTGGCCCTTCTTTTGTACAGCAGTAAGGCCAATTaGGAAAGGTGGATGGAATTG | + |
|
Preference number: 2 (lower is better) Translates to: TSTLGSDLSRTKLALLLYSSKAN*ERWMEL Trigger: CAATTCCATCCACCTTTCCCAATTGGCCTTACTGCT...GTACAAAAGAAGGGCCAATTTTGTTCTGGAAAGGTCAGAGCCCAGAGTCGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAGGATTCCAACCCTATGCTGAGAGGGCACTGATAGCCGCCTTCTGTCTCTTTTCTGTCCATGTGTaGAGATACTGTTTCTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: KEGFQPYAERALIAAFCLFSVHV*RYCFFS Trigger: AGAGAAGAAACAGTATCTCCACACATGGACAGAAAA...GAGACAGAAGGCGGCTATCAGTGCCCTCTCAGCATAGGGTTGGAATCCTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGTGCATAATTTTAAACATACAGATTGGCCTCAACCCAGTGGGCCTTTTCAAGGGTTCTTAGCAAGATaGATGGGCTGCTCCTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: AVHNFKHTDWPQPSGPFQGFLAR*MGCSCW Trigger: CCAACAGGAGCAGCCCATCCATCTTGCTAAGAACCC...TTGAAAAGGCCCACTGGGTTGAGGCCAATCTGTATGTTTAAAATTATGCACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCCACTCATAAAATCTAAACAGGCCAGTTaGACACCTCATTGGAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: TLQIPSLPSLASLHPLIKSKQAS*TPHWNK Trigger: TTTGTTCCAATGAGGTGTCCAACTGGCCTGTTTAGA...TTTTATGAGTGGGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
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| 3UTR-3UTR CCA 90 bp | GTCACACGGCACACGGACTTGCTCTCTCCTGCATTAGTGAGCAGTAAGGCCAATACAAATAAAAGAAACTaGCAACAGGGAGAAAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: VTRHTDLLSPALVSSKANTNKRN*QQGESL Trigger: AAGACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGT...ATTGGCCTTACTGCTCACTAATGCAGGAGAGAGCAAGTCCGTGTGCCGTGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR CCA 90 bp | TGCGAGATGAGTAGTTTTTGGCAGATGGTTCTTAAGGCTGAGGTAAGAGGCCAGGCCAATTGGGAAAGGTaGATGGAATTGTTGAGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: CEMSSFWQMVLKAEVRGQANWER*MELLRV Trigger: TACTCTCAACAATTCCATCCACCTTTCCCAATTGGC...CTGGCCTCTTACCTCAGCCTTAAGAACCATCTGCCAAAAACTACTCATCTCGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR CCA 90 bp | GCATCTGATCACTTGGCCATGTCGTGGAAACTGATACTTCCACCACCAGCCATACTTTGTCAGCTTTTGTaGAGAGTTTTTCCCTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ASDHLAMSWKLILPPPAILCQLL*RVFPFF Trigger: GAAGAAGGGAAAAACTCTCCACAAAAGCTGACAAAG...TATGGCTGGTGGTGGAAGTATCAGTTTCCACGACATGGCCAAGTGATCAGATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
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| 3UTR-3UTR TCA 90 bp | CAACCCAGTGGGCCTTTTCAATTCAACACAACCAAGAATTCTGTCAAAGTGAAAGGGGGAAAGGCATGGTaGAATTTCAGTGCTTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: QPSGPFQFNTTKNSVKVKGGKAW*NFSAWR Trigger: TCTCCAAGCACTGAAATTTCACCATGCCTTTCCCCC...TTTCACTTTGACAGAATTCTTGGTTGTGTTGAATTGAAAAGGCCCACTGGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
||
| 3UTR-3UTR GCA 90 bp | CGACTCTGGGCTCTGACCTTTCCAGAACAAAATTGGCCCTTCTTTTGTACCTCCAACAACAGAGAAGGATaGATCATGGAGACACTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: RLWALTFPEQNWPFFCTSNNREG*IMETLN Trigger: ATTTAGTGTCTCCATGATGCATCCTTCTCTGTTGTT...GGAGGTACAAAAGAAGGGCCAATTTTGTTCTGGAAAGGTCAGAGCCCAGAGTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR CAA 90 bp | CTAAAAAGAACAGCTGAAAAACCCTTTCAACGACATGCTAACTGGTaGTCACCCTTTGATATGGTCACTATGGTCAGGATGGGTGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LKRTAEKPFQRHANW*SPFDMVTMVRMGAK Trigger: CTTAGCACCCATCCTGACCATAGTGACCATATCAAAGGGTGACAACCAGTTAGCATGTCGTTGAAAGGGTTTTTCAGCTGTTCTTTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGCTGCCATCATGCGAGATGAGTAGTTTTTGGCAGATGGTTCTTAAGGCTTTTTTGTTTGTACATTaGAAATCCCAAGCCTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LWLPSCEMSSFWQMVLKAFLFVH*KSQAFP Trigger: TGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAA...AGCCTTAAGAACCATCTGCCAAAAACTACTCATCTCGCATGATGGCAGCCAGAG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTCGACTCTGGGCTCTGACCTTTCCAGAACAAAATTGGCCCTTCTTTTGTACAACAACAGAGAAGGATaGATCATGGAGACACTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: TSTLGSDLSRTKLALLLYNNREG*IMETLN Trigger: ATTTAGTGTCTCCATGATGCATCCTTCTCTGTTGTT...GTACAAAAGAAGGGCCAATTTTGTTCTGGAAAGGTCAGAGCCCAGAGTCGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR CCA 90 bp | GCACTACTGTACACTTGTCAAAACAGAAAGATGGGCGGTCCCGAAAATGAGATGAAGGGATGTTCCTTGTaGCTTTTTGTCTTGGTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: ALLYTCQNRKMGGPENEMKGCSL*LFVLVK Trigger: CTTAACCAAGACAAAAAGCCACAAGGAACATCCCTT...CATCTCATTTTCGGGACCGCCCATCTTTCTGTTTTGACAAGTGTACAGTAGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR CAA 90 bp | ATTATTTGTCTTTTTATCAATTATGAAACACAAATCGGCAGTAGGTaGGCTGGGCGGTTGTCTGGCGAAAAGATCTCTGCACACAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: IICLFINYETQIGSR*AGRLSGEKISAHRS Trigger: AGACCTGTGTGCAGAGATCTTTTCGCCAGACAACCGCCCAGCCAACCTACTGCCGATTTGTGTTTCATAATTGATAAAAAGACAAATAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
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| 3UTR-3UTR TCA 90 bp | ATAATTTTAAACATACAGATTGGCCTCAACCCAGTGGGCCTTTTCAATTCAACACAAGACACCCATTCTTaGTCCATGCTCTGGCAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: IILNIQIGLNPVGLFNSTQDTHS*SMLWQS Trigger: ACTCTGCCAGAGCATGGATCAAGAATGGGTGTCTTG...TGTTGAATTGAAAAGGCCCACTGGGTTGAGGCCAATCTGTATGTTTAAAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
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| 3UTR-3UTR GCA 90 bp | GCACTACTGTACACTTGTCAAAACAGAAAGATGGGCGGTCCCGAAAATGAGATGTTTTTGTTTGTACATTaGAAATCCCAAGCCTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: ALLYTCQNRKMGGPENEMFLFVH*KSQAFP Trigger: TGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAA...CATCTCATTTTCGGGACCGCCCATCTTTCTGTTTTGACAAGTGTACAGTAGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR GCA 90 bp | GCACTACTGTACACTTGTCAAAACAGAAAGATGGGCGGTCCCGAAAATGAGATGAGGCACAGAATTTTCTaGAATCTACCGAAACCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: ALLYTCQNRKMGGPENEMRHRIF*NLPKPN Trigger: ATTTGGTTTCGGTAGATTGCAGAAAATTCTGTGCCT...CATCTCATTTTCGGGACCGCCCATCTTTCTGTTTTGACAAGTGTACAGTAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR CCA 90 bp | ACACACGGATGTGGAGTTTCTTACACTGTAACATGGTCCTTGTACACCTTAGAAGCCAATTGGGAAAGGTaGATGGAATTGTTGAGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: THGCGVSYTVTWSLYTLEANWER*MELLRV Trigger: TACTCTCAACAATTCCATCCACCTTTCCCAATTGGC...TTCTAAGGTGTACAAGGACCATGTTACAGTGTAAGAAACTCCACATCCGTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR CAA 90 bp | GTCAAACAGCAGAGTGTACTTTCAAAGAACATTCTTTGTTTTTGTTaGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: VKQQSVLSKNILCFC*YIANPKPSQSRISP Trigger: TGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATGTTCTTTGAAAGTACACTCTGCTGTTTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR GCA 90 bp | ACACACGGATGTGGAGTTTCTTACACTGTAACATGGTCCTTGTACACCTTAGAAGTTTCTAGTCTTCGCTaGTCTACGTATTTAAGACAT | + |
|
Preference number: 2 (lower is better) Translates to: THGCGVSYTVTWSLYTLEVSSLR*STYLRH Trigger: ATGTCTTAAATACGTAGAGCAGCGAAGACTAGAAAC...TTCTAAGGTGTACAAGGACCATGTTACAGTGTAAGAAACTCCACATCCGTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR GCA 90 bp | ACATACAGATTGGCCTCAACCCAGTGGGCCTTTTCAATTCAACACAACCAAGAAATGGTGAAATTTCAGTaGTTGGAGAAAGTTTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: TYRLASTQWAFSIQHNQEMVKFQ*LEKVCS Trigger: AGAACAAACTTTCTCCAAGCACTGAAATTTCACCAT...TTCTTGGTTGTGTTGAATTGAAAAGGCCCACTGGGTTGAGGCCAATCTGTATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAATCAAGTATACCTAAAAAGGTTCCTTGGTTCGATTCATCAGGTCATCATGCACTTGGCCATGTCGTaGAAACTGATACTTCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: KNQVYLKRFLGSIHQVIMHLAMS*KLILPP Trigger: TGGTGGAAGTATCAGTTTCCACGACATGGCCAAGTG...CATGATGACCTGATGAATCGAACCAAGGAACCTTTTTAGGTATACTTGATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
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| 3UTR-3UTR TCA 90 bp | AAACTGAATTTGGAACAGAAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCCAAGTACCCAAGTTTaGCTTGGTAGGAAGAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: KLNLEQKAVTVNTNKRNWPSTQV*LGRKKY Trigger: ATATTTCTTCCTACCAAGTCAAACTTGGGTACTTGG...CCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTTCTGTTCCAAATTCAGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGAGACAAAGGGCTCCAGAGGCAGAGACTTGCGGGTGTGGATAGAAACCAACCAGCAGCAATGGGCTTaGGCAGCGAAGCAGGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: AETKGSRGRDLRVWIETNQQQWA*AAKQEQ Trigger: TTGCTCCTGCTTCGCTGCCAAAGCCCATTGCTGCTG...GTTGGTTTCTATCCACACCCGCAAGTCTCTGCCTCTGGAGCCCTTTGTCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| 3UTR TCA 72 bp | TACTGTTTCTTCTCTCAGGTGGCTGCAGGCGAGTGCTaGGACAAAGGGCTCCAGAGGCAGAGACTTGCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: YCFFSQVAAGEC*DKGLQRQRLAG Trigger: ACCCGCAAGTCTCTGCCTCTGGAGCCCTTTGTCTCAGCACTCGCCTGCAGCCACCTGAGAGAAGAAACAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR-3UTR CAA 90 bp | AGCCTGTCCCCTCCAGTCAGTCACACGGCACACGGACTTGCTCTCTCCTGCATTTGCGACACACCTCACTaGCAGATAACCCTGTACAGT | + |
|
Preference number: 3 (lower is better) Translates to: SLSPPVSHTAHGLALSCICDTPH*QITLYS Trigger: ACTGTACAGGGTTATCTGCAAGTGAGGTGTGTCGCA...AATGCAGGAGAGAGCAAGTCCGTGTGCCGTGTGACTGACTGGAGGGGACAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| 3UTR TCA 72 bp | AGGGCCTGCTCCTTTCTGAGCATGAGGCTTTGTAACTaGGGCCAGAAAGGGGGAGAACTGGTGATCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RACSFLSMRLCN*GQKGGELVILA Trigger: AGCCAAGATCACCAGTTCTCCCCCTTTCTGGCCTCAGTTACAAAGCCTCATGCTCAGAAAGGAGCAGGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
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| 3UTR TCA 72 bp | GGCGACGGTCTCTCTCTTACCTACGCAGCACGCATCTaGTCACTTGGCCATGTCGTGGAAACTGATACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GDGLSLTYAARI*SLGHVVETDTS Trigger: GGAAGTATCAGTTTCCACGACATGGCCAAGTGATCAGATGCGTGCTGCGTAGGTAAGAGAGAGACCGTCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
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| 3UTR GCA 72 bp | AGGGAACGTCCATCCCAGAGACTTCTAACTAAGGGCTaGCTGAGAGTTGGCAAGGTGATGGGGTTGCATAGC | + |
|
Preference number: 3 (lower is better) Translates to: RERPSQRLLTKG*LRVGKVMGLHS Trigger: GCTATGCAACCCCATCACCTTGCCAACTCTCAGGCAGCCCTTAGTTAGAAGTCTCTGGGATGGACGTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| 3UTR GCA 72 bp | GCCGAGACTCCTGTTTGGTCTTTTCTGGGTTACAGGTaGTATGGTGCAGCACTGTGGGCTTCTGAAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: AETPVWSFLGYR*YGAALWASEAV Trigger: CACAGCTTCAGAAGCCCACAGTGCTGCACCATAGCACCTGTAACCCAGAAAAGACCAAACAGGAGTCTCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTGGGGGTGGGAGCTGGGAATCCCAGCAGGACAAGTGTCCCAGCAGGACGGGAAAGGTGGATGGAATaGTTGAGAGTAGAAATAATC | + |
|
Preference number: 3 (lower is better) Translates to: ELGVGAGNPSRTSVPAGRERWME*LRVEII Trigger: GATTATTTCTACTCTCAACAATTCCATCCACCTTTC...CCGTCCTGCTGGGACACTTGTCCTGCTGGGATTCCCAGCTCCCACCCCCAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGGCTGCCATCATGCGAGATGAGTAGTTTTTGGCAGATGGTTCTTAAGGCTACACGGCACACGGACTaGCTCTCTCCTGCATTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LWLPSCEMSSFWQMVLKATRHTD*LSPALV Trigger: CACTAATGCAGGAGAGAGCAAGTCCGTGTGCCGTGT...AGCCTTAAGAACCATCTGCCAAAAACTACTCATCTCGCATGATGGCAGCCAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTCACCTCGGCTGGCTTTCCTGGGACTTCTTTTCCACATCGCAGCATCTTTTCATCCTTCTCGAGGCTTaGGTGTCTCTGCAAGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: AHLGWLSWDFFSTSQHLFILLEA*VSLQGN Trigger: ATTTCCTTGCAGAGACACCAAAGCCTCGAGAAGGAT...GAAAAGATGCTGCGATGTGGAAAAGAAGTCCCAGGAAAGCCAGCCGAGGTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| 3UTR CCA 72 bp | CCTACGCAGCACGCATCTGATCACTTGGCCATGTCGTaGAAACTGATACTTCCACCACCAGCCATAAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PTQHASDHLAMS*KLILPPPAIRV Trigger: AACTCTTATGGCTGGTGGTGGAAGTATCAGTTTCCACGACATGGCCAAGTGATCAGATGCGTGCTGCGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| 3UTR TCA 72 bp | AAGGGAGCAGAGCTAACTATGCCTTCTTGGCATTCCTaGTTGGCCACATGGGTAAGGAAGGATTCCAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: KGAELTMPSWHS*LATWVRKDSNP Trigger: AGGGTTGGAATCCTTCCTTACCCATGTGGCCAATCAGGAATGCCAAGAAGGCATAGTTAGCTCTGCTCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| 3UTR TCA 72 bp | GCATCTAATGGCTCAGTGAGGCAAGACACCCATTCTTaGTCCATGCTCTGGCAGAGTAACTTGAGCCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: ASNGSVRQDTHS*SMLWQSNLSHH Trigger: GTGATGGCTCAAGTTACTCTGCCAGAGCATGGATCAAGAATGGGTGTCTTGCCTCACTGAGCCATTAGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
||
| 3UTR CCA 72 bp | TTCAACGACATGCTAACTGGTTGTCACCCTTTGATATaGTCACTATGGTCAGGATGGGTGCTAAGGGCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: FNDMLTGCHPLI*SLWSGWVLRAR Trigger: CCGAGCCCTTAGCACCCATCCTGACCATAGTGACCATATCAAAGGGTGACAACCAGTTAGCATGTCGTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAGAAATAATCAGAGCAGAACTGTCGTACCCCCTCCCTGCTTCCCCTCCTGTGGTTTTTGTTTGTACATaGCAAATCCCAAGCCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VEIIRAELSYPLPASPPVVFVCT*QIPSLP Trigger: GGGAAGGCTTGGGATTTGCAATGTACAAACAAAAAC...CACAGGAGGGGAAGCAGGGAGGGGGTACGACAGTTCTGCTCTGATTATTTCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR TCA 72 bp | CCCTATATGCCACTTTCCCACCTCGACTCTGGGCTCTaGCCTTTCCAGAACAAAATTGGCCCTTCTTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PYMPLSHLDSGL*PFQNKIGPSFV Trigger: TACAAAAGAAGGGCCAATTTTGTTCTGGAAAGGTCAGAGCCCAGAGTCGAGGTGGGAAAGTGGCATATAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR TCA 72 bp | TTAGTAGCTATGCGCTCTGGCTGCCATCATGCGAGATaGGTAGTTTTTGGCAGATGGTTCTTAAGGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LVAMRSGCHHAR*VVFGRWFLRLR Trigger: CCTCAGCCTTAAGAACCATCTGCCAAAAACTACTCATCTCGCATGATGGCAGCCAGAGCGCATAGCTACTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR GCA 72 bp | AGCGTCTGGGTCACAGTCTACGTTTCTAGTCTTCGCTaGTCTACGTATTTAAGACATGGGCAGCAGCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SVWVTVYVSSLR*STYLRHGQQQR Trigger: TCTTTGCTGCTGCCCATGTCTTAAATACGTAGAGCAGCGAAGACTAGAAACGTAGACTGTGACCCAGACGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR GCA 72 bp | AGAAATAATCAGAGCAGAACTGTCGTACCCCCTCCCTaGTTCCCCTCCTGTGACATCTCAAATTTGTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: RNNQSRTVVPPP*FPSCDISNLST Trigger: AGTGGACAAATTTGAGATGTCACAGGAGGGGAAGCAGGGAGGGGGTACGACAGTTCTGCTCTGATTATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR GCA 72 bp | CAGCACTTCTGCAAACCCCCACTTAGCTTTAGAGAATaGAAAGGGTTCCTTTGCGCCTCTATCTTTCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QHFCKPPLSFRE*KGFLCASIFPQ Trigger: CTGAGGAAAGATAGAGGCGCAAAGGAACCCTTTGCATTCTCTAAAGCTAAGTGGGGGTTTGCAGAAGTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR CCA 72 bp | ATGCTAACTGGTTGTCACCCTTTGATATGGTCACTATaGTCAGGATGGGTGCTAAGGGCTCGGAATAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: MLTGCHPLIWSL*SGWVLRARNRC Trigger: GCATCTATTCCGAGCCCTTAGCACCCATCCTGACCATAGTGACCATATCAAAGGGTGACAACCAGTTAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR-3UTR CAA 90 bp | CGACTCTGGGCTCTGACCTTTCCAGAACAAAATTGGCCCTTCTTTTGTACCTCCACAGATTCAATCTCATaGCGACACACCTCACTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RLWALTFPEQNWPFFCTSTDSIS*RHTSLA Trigger: TGCAAGTGAGGTGTGTCGCAATGAGATTGAATCTGT...GGAGGTACAAAAGAAGGGCCAATTTTGTTCTGGAAAGGTCAGAGCCCAGAGTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGATACTTCCACCACCAGCCATAAGAGTTCAGACGCCCCCGGTAGTTTTAATCCTGCTTTGTCAGCTTTaGTGGAGAGTTTTTCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LILPPPAIRVQTPPVVLILLCQL*WRVFPF Trigger: GAAGGGAAAAACTCTCCACAAAAGCTGACAAAGCAG...GATTAAAACTACCGGGGGCGTCTGAACTCTTATGGCTGGTGGTGGAAGTATCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAAACACCAATTGAAACACCAAAAGGCCCCCATATaGCAGTGGTTCTATCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VGPTLCNLPETEKHQLKHQKAPI*QWFYQK Trigger: CTTCTGATAGAACCACTGCAATATGGGGGCCTTTTG...GTGTTTCAATTGGTGTTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAAACACCAATTGAAACACTTGTGGCTTTTTGTCTaGGTTAAGTGCCTAGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VGPTLCNLPETEKHQLKHLWLFV*VKCLGA Trigger: TGCCCCTAGGCACTTAACCAAGACAAAAAGCCACAA...GTGTTTCAATTGGTGTTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR TCA 72 bp | GGTGCTATGGTGCAGCACTGTGGGCTTCTGAAGCTGTaGTTTCTTCTTGACATGGCAATTTTAAACCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GAMVQHCGLLKL*FLLDMAILNQK Trigger: CTTCTGGTTTAAAATTGCCATGTCAAGAAGAAATCACAGCTTCAGAAGCCCACAGTGCTGCACCATAGCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| 3UTR TCA 72 bp | TTTCCAATGTGTGGGGCCTACACTTTGCAATCTACCTaGGACGGAAAAACACCAATTGAAACACAGGAACCT | + |
|
Preference number: 3 (lower is better) Translates to: FPMCGAYTLQST*DGKTPIETQEP Trigger: AGGTTCCTGTGTTTCAATTGGTGTTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCACACATTGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR CCA 72 bp | ATGTTCACGGAAACTTATTTTAGTAGCTATGCGCTCTaGCTGCCATCATGCGAGATGAGTAGTTTTTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: MFTETYFSSYAL*LPSCEMSSFWQ Trigger: CTGCCAAAAACTACTCATCTCGCATGATGGCAGCCAGAGCGCATAGCTACTAAAATAAGTTTCCGTGAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR CCA 72 bp | AGAACAGCTGAAAAACCCTTTCAACGACATGCTAACTaGTTGTCACCCTTTGATATGGTCACTATGGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RTAEKPFQRHAN*LSPFDMVTMVR Trigger: CCTGACCATAGTGACCATATCAAAGGGTGACAACCAGTTAGCATGTCGTTGAAAGGGTTTTTCAGCTGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR CCA 72 bp | ACACTGCACTACTGTACACTTGTCAAAACAGAAAGATaGGCGGTCCCGAAAATGAGATGCCAATTCTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: TLHYCTLVKTER*AVPKMRCQFCE Trigger: TTCACAGAATTGGCATCTCATTTTCGGGACCGCCCATCTTTCTGTTTTGACAAGTGTACAGTAGTGCAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR CCA 72 bp | GAACCGATACAAAATGCGAATGGGAACACACGGATGTaGAGTTTCTTACACTGTAACATGGTCCTTGTACAC | + |
|
Preference number: 3 (lower is better) Translates to: EPIQNANGNTRM*SFLHCNMVLVH Trigger: GTGTACAAGGACCATGTTACAGTGTAAGAAACTCCACATCCGTGTGTTCCCATTCGCATTTTGTATCGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR CCA 72 bp | AAAGTTTGTTCTTTAAGCGTTGGGTTCTTAGCAAGATaGATGGGCTGCTCCTGTTGGGAGAAGTCGTTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KVCSLSVGFLAR*MGCSCWEKSFF Trigger: GAAAAACGACTTCTCCCAACAGGAGCAGCCCATCCATCTTGCTAAGAACCCAACGCTTAAAGAACAAACTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
||
| 3UTR CCA 72 bp | ATTTCAGTGCTTGGAGAAAGTTTGTTCTTTAAGCGTTaGGTTCTTAGCAAGATGGATGGGCTGCTCCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: ISVLGESLFFKR*VLSKMDGLLLL Trigger: CAACAGGAGCAGCCCATCCATCTTGCTAAGAACCCAACGCTTAAAGAACAAACTTTCTCCAAGCACTGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGGCTGCCATCATGCGAGATGAGTAGTTTTTGGCAGATGGTTCTTAAGGCTAGGTGGATGGAATTGTaGAGAGTAGAAATAATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LWLPSCEMSSFWQMVLKARWMEL*RVEIIR Trigger: TCTGATTATTTCTACTCTCAACAATTCCATCCACCT...AGCCTTAAGAACCATCTGCCAAAAACTACTCATCTCGCATGATGGCAGCCAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR CCA 72 bp | GAGGACTTGGCAGTGCATAATTTTAAACATACAGATTaGCCTCAACCCAGTGGGCCTTTTCAATTCAACACA | + |
|
Preference number: 3 (lower is better) Translates to: EDLAVHNFKHTD*PQPSGPFQFNT Trigger: TGTGTTGAATTGAAAAGGCCCACTGGGTTGAGGCCAATCTGTATGTTTAAAATTATGCACTGCCAAGTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACTACTGTACACTTGTCAAAACAGAAAGATGGGCGGTCCCGAAAATGAGATGAGGTGGATGGAATTGTaGAGAGTAGAAATAATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ALLYTCQNRKMGGPENEMRWMEL*RVEIIR Trigger: TCTGATTATTTCTACTCTCAACAATTCCATCCACCT...CATCTCATTTTCGGGACCGCCCATCTTTCTGTTTTGACAAGTGTACAGTAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR CCA 72 bp | TCAGTCATCCTGTTCTTCCTGCTTTGTCAGCTTTTGTaGAGAGTTTTTCCCTTCTTCCCATTAGCAGAAATT | + |
|
Preference number: 3 (lower is better) Translates to: SVILFFLLCQLL*RVFPFFPLAEI Trigger: AATTTCTGCTAATGGGAAGAAGGGAAAAACTCTCCACAAAAGCTGACAAAGCAGGAAGAACAGGATGACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| 3UTR CCA 72 bp | CTAAGGTGCAGATATGATAATTTAATTTATGCACAGTaGCGGTATCTTCTGCCGAGACTCCTGTTTGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LRCRYDNLIYAQ*RYLLPRLLFGL Trigger: AAGACCAAACAGGAGTCTCGGCAGAAGATACCGCCACTGTGCATAAATTAAATTATCATATCTGCACCTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTTCCTTGGTTCGATTCATCAGGTCATCATGTAAATATTCCACAGAAAATTCCTGTTCTTCCTGCTTaGTCAGCTTTTGTGGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: KVPWFDSSGHHVNIPQKIPVLPA*SAFVES Trigger: ACTCTCCACAAAAGCTGACAAAGCAGGAAGAACAGG...AATTTTCTGTGGAATATTTACATGATGACCTGATGAATCGAACCAAGGAACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| 3UTR TCA 72 bp | CAGAACTGGCCTAGAGGGAAAAACAAGACGTCATCGTaGCTAAAGAACAAGCTTATTTGGCATCAATTATAC | + |
|
Preference number: 3 (lower is better) Translates to: QNWPRGKNKTSS*LKNKLIWHQLY Trigger: GTATAATTGATGCCAAATAAGCTTGTTCTTTAGTCACGATGACGTCTTGTTTTTCCCTCTAGGCCAGTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAATTTTAAACATACAGATTGGCCTCAACCCAGTGGGCCTTTTCAATTCAACAGTGCTTGGAGAAAGTTaGTTCTTTAAGCGTTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: IILNIQIGLNPVGLFNSTVLGES*FFKRWV Trigger: AACCCAACGCTTAAAGAACAAACTTTCTCCAAGCAC...TGTTGAATTGAAAAGGCCCACTGGGTTGAGGCCAATCTGTATGTTTAAAATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
||
| 3UTR GCA 72 bp | GTCAACATTGTAAGCCATAAAGTTACATCAGAACACTaGACTACTGTACACTTGTCAAAACAGAAAGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: VNIVSHKVTSEH*TTVHLSKQKDG Trigger: CCCATCTTTCTGTTTTGACAAGTGTACAGTAGTGCAGTGTTCTGATGTAACTTTATGGCTTACAATGTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR GCA 72 bp | TCAGAATCAGTCAGAAATCCTAGCCATTTCCATAAGTaGAAAAATCAAGTATACCTAAAAAGGTTCCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SESVRNPSHFHK*KNQVYLKRFLG Trigger: ACCAAGGAACCTTTTTAGGTATACTTGATTTTTGCACTTATGGAAATGGCTAGGATTTCTGACTGATTCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTGGGGGTGGGAGCTGGGAATCCCAGCAGGACAAGTGTCCCAGCAGGACGGCCAGTGACCGCAGGGTaGTCCACCTGGCAGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: ELGVGAGNPSRTSVPAGRPVTAG*STWQIT Trigger: GGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGG...CCGTCCTGCTGGGACACTTGTCCTGCTGGGATTCCCAGCTCCCACCCCCAACTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCCCAGCAGGACGGTGTCTGTAACATACAGTACACACAGGACACAGCCCACCGCCGCCACAGCCGCTaGCGCCGCACACTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: VSQQDGVCNIQYTQDTAHRRHSR*RRTLGS Trigger: GGATCCCAGTGTGCGGCGGCAGCGGCTGTGGCGGCG...GTGGGCTGTGTCCTGTGTGTACTGTATGTTACAGACACCGTCCTGCTGGGACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR GCA 90 bp | GCTCACCTCGGCTGGCTTTCCTGGGACTTCTTTTCCACATCGCAGCATCTTTTCCGCCGCCACAGCCGCTaGCGCCGCACACTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: AHLGWLSWDFFSTSQHLFRRHSR*RRTLGS Trigger: GGATCCCAGTGTGCGGCGGCAGCGGCTGTGGCGGCG...GAAAAGATGCTGCGATGTGGAAAAGAAGTCCCAGGAAAGCCAGCCGAGGTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGCTGCCCAAGGGAACGTCCATCCCAGAGACTTCTAACTAAGGGCTGCCTGTCTGTCCATCACCTGTaGGGATCAGTGCCGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGCPRERPSQRLLTKGCLSVHHL*GSVPRP Trigger: CGGCCGCGGCACTGATCCCCACAGGTGATGGACAGA...CAGGCAGCCCTTAGTTAGAAGTCTCTGGGATGGACGTTCCCTTGGGCAGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR TCA 90 bp | GGCACCCAGGCTGGTGAGGTGAGTCTCAGCTCACCTCGGCTGGCTTTCCTGGGACCACTCCTCCACCTCTaGTTTGCCTTTGAGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTQAGEVSLSSPRLAFLGPLLHL*FAFEFL Trigger: AAGGAACTCAAAGGCAAATCAGAGGTGGAGGAGTGG...TCCCAGGAAAGCCAGCCGAGGTGAGCTGAGACTCACCTCACCAGCCTGGGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR TCA 90 bp | CCATCAAGAACAGCTGTGAGCAGCAGCAATGGGCTTTGGCAGCGAAGCAGGAGCTCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PSRTAVSSSNGLWQRSRSSAGFQ*PQGAPP Trigger: AGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGA...GCTCCTGCTTCGCTGCCAAAGCCCATTGCTGCTGCTCACAGCTGTTCTTGATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR GCA 90 bp | GAGTCTCAGCTCACCTCGGCTGGCTTTCCTGGGACTTCTTTTCCACATCGCAGCACCTGTGGGGATCAGTaGCGCGGCCGAAAGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ESQLTSAGFPGTSFPHRSTCGDQ*RGRKEQ Trigger: TTGCTCCTTTCGGCCGCGGCACTGATCCCCACAGGT...GCTGCGATGTGGAAAAGAAGTCCCAGGAAAGCCAGCCGAGGTGAGCTGAGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR CCA 90 bp | ACCCTGTACAGTAATGAAGATCCACAGCAGACGACAGCGTCTGGGTCACAGTCTGCTGCCGCCGCACACTaGGATCCGCTCGGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TLYSNEDPQQTTASGSQSAAAAH*DPLGST Trigger: TGTGCTGCCGAGCGGATCCCAGTGTGCGGCGGCAGC...AGACTGTGACCCAGACGCTGTCGTCTGCTGTGGATCTTCATTACTGTACAGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTCCCAGTATTTGAAGCCTCTCCCTTCTGGGCTGCCCAAGGGAACGTCCATGCTGCCGCCGCACACTaGGATCCGCTCGGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: IFPVFEASPFWAAQGNVHAAAAH*DPLGST Trigger: TGTGCTGCCGAGCGGATCCCAGTGTGCGGCGGCAGC...ATGGACGTTCCCTTGGGCAGCCCAGAAGGGAGAGGCTTCAAATACTGGGAAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCCGCCGCCACAGCCGCTaGCGCCGCACACTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: FLFVHCKSQAFPVSHLSTRRHSR*RRTLGS Trigger: GGATCCCAGTGTGCGGCGGCAGCGGCTGTGGCGGCG...GGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGGATTCCAACCCTATGCTGAGAGGGCACTGATAGCCGCCTTCTGTCTCCCAGTGACCGCAGGGTaGTCCACCTGGCAGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: KEGFQPYAERALIAAFCLPVTAG*STWQIT Trigger: GGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGG...GAGACAGAAGGCGGCTATCAGTGCCCTCTCAGCATAGGGTTGGAATCCTTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR GCA 90 bp | GTGTCCCAGCAGGACGGTGTCTGTAACATACAGTACACACAGGACACAGCCCACCACTGCGTGGTCCACTaGCCCAATGGTCCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSQQDGVCNIQYTQDTAHHCVVH*PNGPLF Trigger: GAAGAGGGGACCATTGGGGCAGTGGACCACGCAGTG...GTGGGCTGTGTCCTGTGTGTACTGTATGTTACAGACACCGTCCTGCTGGGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAAATAATCAGAGCAGAACTGTCGTACCCCCTCCCTGCTTCCCCTCCTGTGTCTGTCCATCACCTGTaGGGATCAGTGCCGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VEIIRAELSYPLPASPPVSVHHL*GSVPRP Trigger: CGGCCGCGGCACTGATCCCCACAGGTGATGGACAGA...CACAGGAGGGGAAGCAGGGAGGGGGTACGACAGTTCTGCTCTGATTATTTCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | GCTGAGACAAAGGGCTCCAGAGGCAGAGACTTGCGGGTGTGGATAGAAACCAACCCTGATGGTCGTCGCTaGCTTGCTGGCCATGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AETKGSRGRDLRVWIETNPDGRR*LAGHGS Trigger: ACTGCCATGGCCAGCAAGCCAGCGACGACCATCAGG...GTTGGTTTCTATCCACACCCGCAAGTCTCTGCCTCTGGAGCCCTTTGTCTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCATTGGACGCCGCCACAGCCGCTaGCGCCGCACACTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PVSLSLYHLNRPVGHLIGRRHSR*RRTLGS Trigger: GGATCCCAGTGTGCGGCGGCAGCGGCTGTGGCGGCG...TCCAATGAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | GCTCACCTCGGCTGGCTTTCCTGGGACTTCTTTTCCACATCGCAGCATCTTTTCCACTGCGTGGTCCACTaGCCCAATGGTCCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AHLGWLSWDFFSTSQHLFHCVVH*PNGPLF Trigger: GAAGAGGGGACCATTGGGGCAGTGGACCACGCAGTG...GAAAAGATGCTGCGATGTGGAAAAGAAGTCCCAGGAAAGCCAGCCGAGGTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR CCA 90 bp | ACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCCACTCATAAAAGCTGCCGCCGCACACTaGGATCCGCTCGGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TLQIPSLPSLASLHPLIKAAAAH*DPLGST Trigger: TGTGCTGCCGAGCGGATCCCAGTGTGCGGCGGCAGC...TTTTATGAGTGGGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| 3UTR CAA 72 bp | GCCTGTCCCCTCCAGTCAGTCACACGGCACACGGACTaGCTCTCTCCTGCATTAGTGAGCAGTAAGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ACPLQSVTRHTD*LSPALVSSKAN Trigger: ATTGGCCTTACTGCTCACTAATGCAGGAGAGAGCAAGTCCGTGTGCCGTGTGACTGACTGGAGGGGACAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | GGCACCCAGGCTGGTGAGGTGAGTCTCAGCTCACCTCGGCTGGCTTTCCTGGGAGAAAAATTCAGCAGCTaGAACCTGCTGTCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTQAGEVSLSSPRLAFLGEKFSS*NLLSFK Trigger: TTTGAAGGACAGCAGGTTTCAGCTGCTGAATTTTTC...TCCCAGGAAAGCCAGCCGAGGTGAGCTGAGACTCACCTCACCAGCCTGGGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR GCA 90 bp | AAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCCGCCGCCACAGCCGCTaGCGCCGCACACTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: KVPVSLSLYHLNRPVGHLRRHSR*RRTLGS Trigger: GGATCCCAGTGTGCGGCGGCAGCGGCTGTGGCGGCG...GAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGGATTCCAACCCTATGCTGAGAGGGCACTGATAGCCGCCTTCTGTCTCTGGTCGTCGCTGGCTTaGTGGCCATGGCAGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KEGFQPYAERALIAAFCLWSSLA*WPWQYS Trigger: ACTGTACTGCCATGGCCAGCAAGCCAGCGACGACCA...GAGACAGAAGGCGGCTATCAGTGCCCTCTCAGCATAGGGTTGGAATCCTTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR GCA 90 bp | AAATCCCTATATGCCACTTTCCCACCTCGACTCTGGGCTCTGACCTTTCCAGAACCAGTGACCGCAGGGTaGTCCACCTGGCAGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: KSLYATFPPRLWALTFPEPVTAG*STWQIT Trigger: GGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGG...TTCTGGAAAGGTCAGAGCCCAGAGTCGAGGTGGGAAAGTGGCATATAGGGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR GCA 90 bp | CTGATACTTCCACCACCAGCCATAAGAGTTCAGACGCCCCCGGTAGTTTTAATCCCAGTGACCGCAGGGTaGTCCACCTGGCAGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: LILPPPAIRVQTPPVVLIPVTAG*STWQIT Trigger: GGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGG...GATTAAAACTACCGGGGGCGTCTGAACTCTTATGGCTGGTGGTGGAAGTATCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGCTGCCCAAGGGAACGTCCATCCCAGAGACTTCTAACTAAGGGCTGCCTGCCTTTCCCACTATGTTaGAAGCCTCACAGCGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGCPRERPSQRLLTKGCLPFPLC*KPHSGK Trigger: CTTACCGCTGTGAGGCTTCCAACATAGTGGGAAAGG...CAGGCAGCCCTTAGTTAGAAGTCTCTGGGATGGACGTTCCCTTGGGCAGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR TCA 90 bp | CCATCAAGAACAGCTGTGAGCAGCAGCAATGGGCTTTGGCAGCGAAGCAGGAGCCAGGAGCTGGATCACTaGGTCGTCACTCTTATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSRTAVSSSNGLWQRSRSQELDH*VVTLID Trigger: GTCAATAAGAGTGACGACTCAGTGATCCAGCTCCTG...GCTCCTGCTTCGCTGCCAAAGCCCATTGCTGCTGCTCACAGCTGTTCTTGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR TCA 90 bp | CCATCAAGAACAGCTGTGAGCAGCAGCAATGGGCTTTGGCAGCGAAGCAGGAGCCCATGGCAGTACAGTTaGCTTCAATCTCCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSRTAVSSSNGLWQRSRSPWQYS*LQSPPL Trigger: AAGGGGAGGAGATTGAAGTCAACTGTACTGCCATGG...GCTCCTGCTTCGCTGCCAAAGCCCATTGCTGCTGCTCACAGCTGTTCTTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR CCA 90 bp | CGACTCTGGGCTCTGACCTTTCCAGAACAAAATTGGCCCTTCTTTTGTACCTCCCCTGATGGTCGTCGCTaGCTTGCTGGCCATGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLWALTFPEQNWPFFCTSPDGRR*LAGHGS Trigger: ACTGCCATGGCCAGCAAGCCAGCGACGACCATCAGG...GGAGGTACAAAAGAAGGGCCAATTTTGTTCTGGAAAGGTCAGAGCCCAGAGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | GTGTCCCAGCAGGACGGTGTCTGTAACATACAGTACACACAGGACACAGCCCACACCTTCAGCATCAGCTaGCTGGTCACAGTGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: VSQQDGVCNIQYTQDTAHTFSIS*LVTVYM Trigger: CATGTACACTGTGACCAGTCAGCTGATGCTGAAGGT...GTGGGCTGTGTCCTGTGTGTACTGTATGTTACAGACACCGTCCTGCTGGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | ACCTCGACTCTGGGCTCTGACCTTTCCAGAACAAAATTGGCCCTTCTTTTGTACTCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TSTLGSDLSRTKLALLLYSAGFQ*PQGAPP Trigger: AGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGA...GTACAAAAGAAGGGCCAATTTTGTTCTGGAAAGGTCAGAGCCCAGAGTCGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR GCA 90 bp | TGCGAGATGAGTAGTTTTTGGCAGATGGTTCTTAAGGCTGAGGTAAGAGGCCAGACCTGTGGGGATCAGTaGCGCGGCCGAAAGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CEMSSFWQMVLKAEVRGQTCGDQ*RGRKEQ Trigger: TTGCTCCTTTCGGCCGCGGCACTGATCCCCACAGGT...CTGGCCTCTTACCTCAGCCTTAAGAACCATCTGCCAAAAACTACTCATCTCGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGGCTGCCATCATGCGAGATGAGTAGTTTTTGGCAGATGGTTCTTAAGGCTACCTGTGGGGATCAGTaGCGCGGCCGAAAGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LWLPSCEMSSFWQMVLKATCGDQ*RGRKEQ Trigger: TTGCTCCTTTCGGCCGCGGCACTGATCCCCACAGGT...AGCCTTAAGAACCATCTGCCAAAAACTACTCATCTCGCATGATGGCAGCCAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR GCA 90 bp | TGCGAGATGAGTAGTTTTTGGCAGATGGTTCTTAAGGCTGAGGTAAGAGGCCAGCACTGCGTGGTCCACTaGCCCAATGGTCCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CEMSSFWQMVLKAEVRGQHCVVH*PNGPLF Trigger: GAAGAGGGGACCATTGGGGCAGTGGACCACGCAGTG...CTGGCCTCTTACCTCAGCCTTAAGAACCATCTGCCAAAAACTACTCATCTCGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR GCA 90 bp | ACGCAGCACGCATCTGATCACTTGGCCATGTCGTGGAAACTGATACTTCCACCATTCAGGTCCGTGAACTaGTGGTTCTGTCGTCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TQHASDHLAMSWKLILPPFRSVN*WFCRRR Trigger: ACGGCGACGACAGAACCAGCAGTTCACGGACCTGAA...TGGTGGAAGTATCAGTTTCCACGACATGGCCAAGTGATCAGATGCGTGCTGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CCA 90 bp | GCTGAGACAAAGGGCTCCAGAGGCAGAGACTTGCGGGTGTGGATAGAAACCAACAAATGGTCTGCCTGTTaGGGTTCAGGAGCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: AETKGSRGRDLRVWIETNKWSAC*GSGAGS Trigger: TGATCCAGCTCCTGAACCCCAACAGGCAGACCATTT...GTTGGTTTCTATCCACACCCGCAAGTCTCTGCCTCTGGAGCCCTTTGTCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTCACACGGCACACGGACTTGCTCTCTCCTGCATTAGTGAGCAGTAAGGCTGGGGCTTCCCGATaGCTTCACACGTTAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSVTRHTDLLSPALVSSKAGASR*LHTLTQ Trigger: TTGAGTTAACGTGTGAAGCCATCGGGAAGCCCCAGC...CTTACTGCTCACTAATGCAGGAGAGAGCAAGTCCGTGTGCCGTGTGACTGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCTCAGCTCACCTCGGCTGGCTTTCCTGGGACTTCTTTTCCACATCGCAGCATTGATGAACAGGTTTaGCCCAGACAGTACGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ESQLTSAGFPGTSFPHRSIDEQV*PRQYGM Trigger: CATGCCGTACTGTCTGGGCCAAACCTGTTCATCAAT...GCTGCGATGTGGAAAAGAAGTCCCAGGAAAGCCAGCCGAGGTGAGCTGAGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| 3UTR CAA 72 bp | ATGCACAGTGGCGGTATCTTCTGCCGAGACTCCTGTTaGGTCTTTTCTGGGTTACAGGTGCTATGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MHSGGIFCRDSC*VFSGLQVLWCS Trigger: GCTGCACCATAGCACCTGTAACCCAGAAAAGACCAAACAGGAGTCTCGGCAGAAGATACCGCCACTGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR TCA 90 bp | GCCATGTCGTGGAAACTGATACTTCCACCACCAGCCATAAGAGTTCAGACGCCCCCATGGCAGTACAGTTaGCTTCAATCTCCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AMSWKLILPPPAIRVQTPPWQYS*LQSPPL Trigger: AAGGGGAGGAGATTGAAGTCAACTGTACTGCCATGG...GGGCGTCTGAACTCTTATGGCTGGTGGTGGAAGTATCAGTTTCCACGACATGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR TCA 90 bp | GGTAAGGAAGGATTCCAACCCTATGCTGAGAGGGCACTGATAGCCGCCTTCTGTACCTTCAGCATCAGCTaGCTGGTCACAGTGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: GKEGFQPYAERALIAAFCTFSIS*LVTVYM Trigger: CATGTACACTGTGACCAGTCAGCTGATGCTGAAGGT...ACAGAAGGCGGCTATCAGTGCCCTCTCAGCATAGGGTTGGAATCCTTCCTTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGGATTCCAACCCTATGCTGAGAGGGCACTGATAGCCGCCTTCTGTCTCCTCCTCCCCTTCAACTaGCGTGTCTTTCTGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: KEGFQPYAERALIAAFCLLLPFN*RVFLDI Trigger: GATATCCAGAAAGACACGGCAGTTGAAGGGGAGGAG...GAGACAGAAGGCGGCTATCAGTGCCCTCTCAGCATAGGGTTGGAATCCTTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGGCTGCCATCATGCGAGATGAGTAGTTTTTGGCAGATGGTTCTTAAGGCTTGGTCGTCGCTGGCTTaGTGGCCATGGCAGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LWLPSCEMSSFWQMVLKAWSSLA*WPWQYS Trigger: ACTGTACTGCCATGGCCAGCAAGCCAGCGACGACCA...AGCCTTAAGAACCATCTGCCAAAAACTACTCATCTCGCATGATGGCAGCCAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | CAGAATTTTCTGCAATCTACCGAAACCAAATCCAAGTACCCAAGTTTGACTTGGGCTGCCGCCGCACACTaGGATCCGCTCGGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QNFLQSTETKSKYPSLTWAAAAH*DPLGST Trigger: TGTGCTGCCGAGCGGATCCCAGTGTGCGGCGGCAGC...CCAAGTCAAACTTGGGTACTTGGATTTGGTTTCGGTAGATTGCAGAAAATTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTCCCAGTATTTGAAGCCTCTCCCTTCTGGGCTGCCCAAGGGAACGTCCATGCTGGGGCTTCCCGATaGCTTCACACGTTAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IFPVFEASPFWAAQGNVHAGASR*LHTLTQ Trigger: TTGAGTTAACGTGTGAAGCCATCGGGAAGCCCCAGC...ATGGACGTTCCCTTGGGCAGCCCAGAAGGGAGAGGCTTCAAATACTGGGAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGTCCATGTGTGGAGATACTGTTTCTTCTCTCAGGTGGCTGCAGGCGAGGTTACCATCACAGGCTaGGGCTTCCCGATGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSVHVWRYCFFSQVAAGEVTITG*GFPMAS Trigger: TGAAGCCATCGGGAAGCCCCAGCCTGTGATGGTAAC...CTCGCCTGCAGCCACCTGAGAGAAGAAACAGTATCTCCACACATGGACAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR TCA 90 bp | GTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCCACTCCAGGAGCTGGATCACTaGGTCGTCACTCTTATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VCTLQIPSLPSLASLHPLQELDH*VVTLID Trigger: GTCAATAAGAGTGACGACTCAGTGATCCAGCTCCTG...GAGTGGGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | GTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCCACTCCCATGGCAGTACAGTTaGCTTCAATCTCCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VCTLQIPSLPSLASLHPLPWQYS*LQSPPL Trigger: AAGGGGAGGAGATTGAAGTCAACTGTACTGCCATGG...GAGTGGGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | GTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCCACTCACCTTCAGCATCAGCTaGCTGGTCACAGTGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: VCTLQIPSLPSLASLHPLTFSIS*LVTVYM Trigger: CATGTACACTGTGACCAGTCAGCTGATGCTGAAGGT...GAGTGGGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCATCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CFCLYIANPKPSQSRISPSAGFQ*PQGAPP Trigger: AGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGA...TGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGGATTCCAACCCTATGCTGAGAGGGCACTGATAGCCGCCTTCTGTCTCGACAGTACGGCATGTTaGGGCATTTCATCATCGACT | + |
|
Preference number: 4 (lower is better) Translates to: KEGFQPYAERALIAAFCLDSTAC*GISSST Trigger: AGTCGATGATGAAATGCCTCAACATGCCGTACTGTC...GAGACAGAAGGCGGCTATCAGTGCCCTCTCAGCATAGGGTTGGAATCCTTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR TCA 90 bp | GCATCTGATCACTTGGCCATGTCGTGGAAACTGATACTTCCACCACCAGCCATACAATCTTCAGGTCCGTaGACTGCTGGTTCTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASDHLAMSWKLILPPPAIQSSGP*TAGSVV Trigger: GACGACAGAACCAGCAGTTCACGGACCTGAAGATTG...TATGGCTGGTGGTGGAAGTATCAGTTTCCACGACATGGCCAAGTGATCAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCATTGGAACCTGTGGGGATCAGTaGCGCGGCCGAAAGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PVSLSLYHLNRPVGHLIGTCGDQ*RGRKEQ Trigger: TTGCTCCTTTCGGCCGCGGCACTGATCCCCACAGGT...TCCAATGAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | AAACCACACGAGCTTCTCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAAGCTGCCGCCGCACACTaGGATCCGCTCGGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KPHELLESSSITVSLSSKAAAAH*DPLGST Trigger: TGTGCTGCCGAGCGGATCCCAGTGTGCGGCGGCAGC...TTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGAGAAGCTCGTGTGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | TCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACTCTGTCCATCACCTGTaGGGATCAGTGCCGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SKVPVSLSLYHLNRPVGHSVHHL*GSVPRP Trigger: CGGCCGCGGCACTGATCCCCACAGGTGATGGACAGA...GTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCATTGGACCTGATGGTCGTCGCTaGCTTGCTGGCCATGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PVSLSLYHLNRPVGHLIGPDGRR*LAGHGS Trigger: ACTGCCATGGCCAGCAAGCCAGCGACGACCATCAGG...TCCAATGAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | ACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCCACTCATAAAAGTTACCATCACAGGCTaGGGCTTCCCGATGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLQIPSLPSLASLHPLIKVTITG*GFPMAS Trigger: TGAAGCCATCGGGAAGCCCCAGCCTGTGATGGTAAC...TTTTATGAGTGGGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | ACGCAGCACGCATCTGATCACTTGGCCATGTCGTGGAAACTGATACTTCCACCACCTTTCCCACTATGTTaGAAGCCTCACAGCGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TQHASDHLAMSWKLILPPPFPLC*KPHSGK Trigger: CTTACCGCTGTGAGGCTTCCAACATAGTGGGAAAGG...TGGTGGAAGTATCAGTTTCCACGACATGGCCAAGTGATCAGATGCGTGCTGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CCA 90 bp | CCTCAACCCAGTGGGCCTTTTCAATTCAACACAACCAAGAATTCTGTCAAAGTGAGAGCATTTCTCCTGTaGGGATCAGTGCCGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PQPSGPFQFNTTKNSVKVRAFLL*GSVPRP Trigger: CGGCCGCGGCACTGATCCCCACAGGAGAAATGCTCT...CACTTTGACAGAATTCTTGGTTGTGTTGAATTGAAAAGGCCCACTGGGTTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
||
| 3UTR CAA 72 bp | GTCTCTCTCTTACCTACGCAGCACGCATCTGATCACTaGGCCATGTCGTGGAAACTGATACTTCCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VSLLPTQHASDH*AMSWKLILPPP Trigger: TGGTGGTGGAAGTATCAGTTTCCACGACATGGCCAAGTGATCAGATGCGTGCTGCGTAGGTAAGAGAGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR TCA 90 bp | CGACTCTGGGCTCTGACCTTTCCAGAACAAAATTGGCCCTTCTTTTGTACCTCCCCATGGCAGTACAGTTaGCTTCAATCTCCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLWALTFPEQNWPFFCTSPWQYS*LQSPPL Trigger: AAGGGGAGGAGATTGAAGTCAACTGTACTGCCATGG...GGAGGTACAAAAGAAGGGCCAATTTTGTTCTGGAAAGGTCAGAGCCCAGAGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | GCATCTGATCACTTGGCCATGTCGTGGAAACTGATACTTCCACCACCAGCCATACCACTCCTCCACCTCTaGTTTGCCTTTGAGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASDHLAMSWKLILPPPAIPLLHL*FAFEFL Trigger: AAGGAACTCAAAGGCAAATCAGAGGTGGAGGAGTGG...TATGGCTGGTGGTGGAAGTATCAGTTTCCACGACATGGCCAAGTGATCAGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR TCA 90 bp | GTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCCACTCGACAGTACGGCATGTTaGGGCATTTCATCATCGACT | + |
|
Preference number: 4 (lower is better) Translates to: VCTLQIPSLPSLASLHPLDSTAC*GISSST Trigger: AGTCGATGATGAAATGCCTCAACATGCCGTACTGTC...GAGTGGGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCATTGGATGGTCGTCGCTGGCTTaGTGGCCATGGCAGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PVSLSLYHLNRPVGHLIGWSSLA*WPWQYS Trigger: ACTGTACTGCCATGGCCAGCAAGCCAGCGACGACCA...TCCAATGAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCCAGTGACCGCAGGGTaGTCCACCTGGCAGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: FFVFVCTLQIPSLPSLASPVTAG*STWQIT Trigger: GGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGG...AGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCACCAGTGACCGCAGGGTaGTCCACCTGGCAGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: TFFVFVCTLQIPSLPSLAPVTAG*STWQIT Trigger: GGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGG...TGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | TCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCACTGCGTGGTCCACTaGCCCAATGGTCCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKVPVSLSLYHLNRPVGHHCVVH*PNGPLF Trigger: GAAGAGGGGACCATTGGGGCAGTGGACCACGCAGTG...GTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAAACACCAATTGAAACACAGCTGTGTCTGCGTCTaGTGCGTCATCGGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VGPTLCNLPETEKHQLKHSCVCV*CVIGSF Trigger: AAAGGAGCCGATGACGCAGCAGACGCAGACACAGCT...GTGTTTCAATTGGTGTTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR GCA 90 bp | TGCGAGATGAGTAGTTTTTGGCAGATGGTTCTTAAGGCTGAGGTAAGAGGCCAGTCGAGAATCGTGAACTaGTGGTTCTGTCGTCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CEMSSFWQMVLKAEVRGQSRIVN*WFCRRR Trigger: ACGGCGACGACAGAACCAGCAGTTCACGATTCTCGA...CTGGCCTCTTACCTCAGCCTTAAGAACCATCTGCCAAAAACTACTCATCTCGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTCACACGGCACACGGACTTGCTCTCTCCTGCATTAGTGAGCAGTAAGGATCATCAAGTTACGTaGAGGAACCAGGACTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QSVTRHTDLLSPALVSSKDHQVT*RNQDCD Trigger: ATCACAGTCCTGGTTCCTCCACGTAACTTGATGATC...CTTACTGCTCACTAATGCAGGAGAGAGCAAGTCCGTGTGCCGTGTGACTGACTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGGATTCCAACCCTATGCTGAGAGGGCACTGATAGCCGCCTTCTGTCTCGATCATCAAGTTACGTaGAGGAACCAGGACTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KEGFQPYAERALIAAFCLDHQVT*RNQDCD Trigger: ATCACAGTCCTGGTTCCTCCACGTAACTTGATGATC...GAGACAGAAGGCGGCTATCAGTGCCCTCTCAGCATAGGGTTGGAATCCTTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR CCA 90 bp | GCCATGTCGTGGAAACTGATACTTCCACCACCAGCCATAAGAGTTCAGACGCCCGATCATCAAGTTACGTaGAGGAACCAGGACTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AMSWKLILPPPAIRVQTPDHQVT*RNQDCD Trigger: ATCACAGTCCTGGTTCCTCCACGTAACTTGATGATC...GGGCGTCTGAACTCTTATGGCTGGTGGTGGAAGTATCAGTTTCCACGACATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCCCTGATGGTCGTCGCTaGCTTGCTGGCCATGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KVPVSLSLYHLNRPVGHLPDGRR*LAGHGS Trigger: ACTGCCATGGCCAGCAAGCCAGCGACGACCATCAGG...GAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTAGGAAGCAAAACCTTGGCCCAGTGGCCTAGTGCCACTCCCATTATAAAATCAGCATCAGCTGACTaGTCACAGTGTACATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLGSKTLAQWPSATPIIKSASAD*SQCTCP Trigger: CGGACATGTACACTGTGACCAGTCAGCTGATGCTGA...TTTTATAATGGGAGTGGCACTAGGCCACTGGGCCAAGGTTTTGCTTCCTAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCCCAGCAGGACGGTGTCTGTAACATACAGTACACACAGGACACAGCCCACATGTACCTTTATGTCTaGCAAAATAGCGGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSQQDGVCNIQYTQDTAHMYLYV*QNSGPE Trigger: TTCTGGGCCGCTATTTTGCCAGACATAAAGGTACAT...GTGGGCTGTGTCCTGTGTGTACTGTATGTTACAGACACCGTCCTGCTGGGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTAGGAAGCAAAACCTTGGCCCAGTGGCCTAGTGCCACTCCCATTATAAAAGTTCTGTCGTCGCCGTaGTGTCGTATACATACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLGSKTLAQWPSATPIIKVLSSP*CRIHTA Trigger: TGCTGTATGTATACGACACCACGGCGACGACAGAAC...TTTTATAATGGGAGTGGCACTAGGCCACTGGGCCAAGGTTTTGCTTCCTAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCAAAGGCCGTGAACTGCTaGTTCTGTCGTCGCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CFCLYIANPKPSQSRISPKAVNC*FCRRRG Trigger: ACCACGGCGACGACAGAACCAGCAGTTCACGGCCTT...TGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152459.8 |
||
| 3UTR CAA 72 bp | ACCTCGACTCTGGGCTCTGACCTTTCCAGAACAAAATaGGCCCTTCTTTTGTACCTCCTGCCTTTGTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSTLGSDLSRTK*ALLLYLLPLSS Trigger: GCTTGACAAAGGCAGGAGGTACAAAAGAAGGGCCAATTTTGTTCTGGAAAGGTCAGAGCCCAGAGTCGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR CAA 72 bp | TATGAAACACAAATCGGCAGTAGGTTGGCTGGGCGGTaGTCTGGCGAAAAGATCTCTGCACACAGGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YETQIGSRLAGR*SGEKISAHRSL Trigger: AAGAGACCTGTGTGCAGAGATCTTTTCGCCAGACAACCGCCCAGCCAACCTACTGCCGATTTGTGTTTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
||
| CDS-3UTR TCA 90 bp | ACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCCACTCATAAAACAGGAGCTGGATCACTaGGTCGTCACTCTTATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLQIPSLPSLASLHPLIKQELDH*VVTLID Trigger: GTCAATAAGAGTGACGACTCAGTGATCCAGCTCCTG...TTTTATGAGTGGGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | AACTATGCCTTCTTGGCATTCCTGATTGGCCACATGGGTAAGGAAGGATTCCAAGAGGAACCAGGACTGTaGTGGTGGTGTAACTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NYAFLAFLIGHMGKEGFQEEPGL*WWCNSP Trigger: AGGAGAGTTACACCACCATCACAGTCCTGGTTCCTC...TTGGAATCCTTCCTTACCCATGTGGCCAATCAGGAATGCCAAGAAGGCATAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR TCA 90 bp | ACCTCGACTCTGGGCTCTGACCTTTCCAGAACAAAATTGGCCCTTCTTTTGTACCCACTCCTCCACCTCTaGTTTGCCTTTGAGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSTLGSDLSRTKLALLLYPLLHL*FAFEFL Trigger: AAGGAACTCAAAGGCAAATCAGAGGTGGAGGAGTGG...GTACAAAAGAAGGGCCAATTTTGTTCTGGAAAGGTCAGAGCCCAGAGTCGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCTCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RKQSPLTQIKETGNREKVSAGFQ*PQGAPP Trigger: AGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGA...GACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTTCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FFVFVCTLQIPSLPSLASSAGFQ*PQGAPP Trigger: AGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGA...AGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | GCATCTGATCACTTGGCCATGTCGTGGAAACTGATACTTCCACCACCAGCCATAGACAGTACGGCATGTTaGGGCATTTCATCATCGACT | + |
|
Preference number: 4 (lower is better) Translates to: ASDHLAMSWKLILPPPAIDSTAC*GISSST Trigger: AGTCGATGATGAAATGCCTCAACATGCCGTACTGTC...TATGGCTGGTGGTGGAAGTATCAGTTTCCACGACATGGCCAAGTGATCAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR GCA 90 bp | ATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCACCTGTGGGGATCAGTaGCGCGGCCGAAAGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILCFCLYIANPKPSQSRITCGDQ*RGRKEQ Trigger: TTGCTCCTTTCGGCCGCGGCACTGATCCCCACAGGT...GATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | ACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCCACTCATAAAACTCCTCCCCTTCAACTaGCGTGTCTTTCTGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: TLQIPSLPSLASLHPLIKLLPFN*RVFLDI Trigger: GATATCCAGAAAGACACGGCAGTTGAAGGGGAGGAG...TTTTATGAGTGGGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTCTTCCTGCTTTGTCAGCTTTTGTGGAGAGTTTTTCCCTTCTTCCCATTATGGTCGTCGCTGGCTTaGTGGCCATGGCAGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFFLLCQLLWRVFPFFPLWSSLA*WPWQYS Trigger: ACTGTACTGCCATGGCCAGCAAGCCAGCGACGACCA...TAATGGGAAGAAGGGAAAAACTCTCCACAAAAGCTGACAAAGCAGGAAGAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCACACTGCGTGGTCCACTaGCCCAATGGTCCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TFFVFVCTLQIPSLPSLAHCVVH*PNGPLF Trigger: GAAGAGGGGACCATTGGGGCAGTGGACCACGCAGTG...TGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
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| CDS-3UTR GCA 90 bp | TCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACTGTGTCTGCGTCTGCTaGGTCATCGGCTCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKVPVSLSLYHLNRPVGHCVCVC*VIGSFG Trigger: GCCAAAGGAGCCGATGACGCAGCAGACGCAGACACA...GTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
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| CDS-3UTR GCA 90 bp | CCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCATTGGAAGTAAGGCCGTGAACTaGTGGTTCTGTCGTCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PVSLSLYHLNRPVGHLIGSKAVN*WFCRRR Trigger: ACGGCGACGACAGAACCAGCAGTTCACGGCCTTACT...TCCAATGAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152459.8 |
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| CDS-3UTR CCA 90 bp | CGAATGAAAAACAAGGCACAGAATTTTCTGCAATCTACCGAAACCAAATCCAAGTCTGTCCATCACCTGTaGGGATCAGTGCCGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RMKNKAQNFLQSTETKSKSVHHL*GSVPRP Trigger: CGGCCGCGGCACTGATCCCCACAGGTGATGGACAGA...CTTGGATTTGGTTTCGGTAGATTGCAGAAAATTCTGTGCCTTGTTTTTCATTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGTCCATGTGTGGAGATACTGTTTCTTCTCTCAGGTGGCTGCAGGCGAGTCACTCTTATTGACCTaGCAGCTGATGGTTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FSVHVWRYCFFSQVAAGESLLLT*QLMVAT Trigger: AGTGGCAACCATCAGCTGCCAGGTCAATAAGAGTGA...CTCGCCTGCAGCCACCTGAGAGAAGAAACAGTATCTCCACACATGGACAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCGCTGGGGCTTCCCGATaGCTTCACACGTTAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLFVHCKSQAFPVSHLSTAGASR*LHTLTQ Trigger: TTGAGTTAACGTGTGAAGCCATCGGGAAGCCCCAGC...GGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | AAAACAGAAAGATGGGCGGTCCCGAAAATGAGATGCCAATTCTGTGAACAATGGGTTACCATCACAGGCTaGGGCTTCCCGATGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTERWAVPKMRCQFCEQWVTITG*GFPMAS Trigger: TGAAGCCATCGGGAAGCCCCAGCCTGTGATGGTAAC...CCATTGTTCACAGAATTGGCATCTCATTTTCGGGACCGCCCATCTTTCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | GCATCTGATCACTTGGCCATGTCGTGGAAACTGATACTTCCACCACCAGCCATAATTGATGAACAGGTTTaGCCCAGACAGTACGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ASDHLAMSWKLILPPPAIIDEQV*PRQYGM Trigger: CATGCCGTACTGTCTGGGCCAAACCTGTTCATCAAT...TATGGCTGGTGGTGGAAGTATCAGTTTCCACGACATGGCCAAGTGATCAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CCA 90 bp | ACCTCGACTCTGGGCTCTGACCTTTCCAGAACAAAATTGGCCCTTCTTTTGTACGTTCTGTCGTCGCCGTaGTGTCGTATACATACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSTLGSDLSRTKLALLLYVLSSP*CRIHTA Trigger: TGCTGTATGTATACGACACCACGGCGACGACAGAAC...GTACAAAAGAAGGGCCAATTTTGTTCTGGAAAGGTCAGAGCCCAGAGTCGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTTGTGGAGAGTTTTTCCCTTCTTCCCATTAGCAGAAATTTGGTTCACGCCGAGGAACCAGGACTGTaGTGGTGGTGTAACTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AFVESFSLLPISRNLVHAEEPGL*WWCNSP Trigger: AGGAGAGTTACACCACCATCACAGTCCTGGTTCCTC...GGCGTGAACCAAATTTCTGCTAATGGGAAGAAGGGAAAAACTCTCCACAAAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTTGGTCGTCGCTGGCTTaGTGGCCATGGCAGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: FFVFVCTLQIPSLPSLASWSSLA*WPWQYS Trigger: ACTGTACTGCCATGGCCAGCAAGCCAGCGACGACCA...AGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCTGTGTCTGCGTCTGCTaGGTCATCGGCTCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKQSPLTQIKETGNREKVCVCVC*VIGSFG Trigger: GCCAAAGGAGCCGATGACGCAGCAGACGCAGACACA...GACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | CTGAATTTGGAACAGAAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAATCTGTCCATCACCTGTaGGGATCAGTGCCGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LNLEQKAVTVNTNKRNWQSVHHL*GSVPRP Trigger: CGGCCGCGGCACTGATCCCCACAGGTGATGGACAGA...TTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTTCTGTTCCAAATTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCGACTCTGGGCTCTGACCTTTCCAGAACAAAATTGGCCCTTCTTTTGTACTCACTCTTATTGACCTaGCAGCTGATGGTTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TSTLGSDLSRTKLALLLYSLLLT*QLMVAT Trigger: AGTGGCAACCATCAGCTGCCAGGTCAATAAGAGTGA...GTACAAAAGAAGGGCCAATTTTGTTCTGGAAAGGTCAGAGCCCAGAGTCGAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCAAATGGTCTGCCTGTTaGGGTTCAGGAGCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: FLFVHCKSQAFPVSHLSTKWSAC*GSGAGS Trigger: TGATCCAGCTCCTGAACCCCAACAGGCAGACCATTT...GGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCTTCCTGATGGTCGTCGCTaGCTTGCTGGCCATGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KAVTVNTNKRNWQQGESLPDGRR*LAGHGS Trigger: ACTGCCATGGCCAGCAAGCCAGCGACGACCATCAGG...AAGACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | AACTATGCCTTCTTGGCATTCCTGATTGGCCACATGGGTAAGGAAGGATTCCAATCAGCATCAGCTGACTaGTCACAGTGTACATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NYAFLAFLIGHMGKEGFQSASAD*SQCTCP Trigger: CGGACATGTACACTGTGACCAGTCAGCTGATGCTGA...TTGGAATCCTTCCTTACCCATGTGGCCAATCAGGAATGCCAAGAAGGCATAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR CCA 90 bp | GCACTACTGTACACTTGTCAAAACAGAAAGATGGGCGGTCCCGAAAATGAGATGCCTTTCCCACTATGTTaGAAGCCTCACAGCGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLYTCQNRKMGGPENEMPFPLC*KPHSGK Trigger: CTTACCGCTGTGAGGCTTCCAACATAGTGGGAAAGG...CATCTCATTTTCGGGACCGCCCATCTTTCTGTTTTGACAAGTGTACAGTAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTGGGACTTCTTTTCCACATCGCAGCATCTTTTCTGTCCATGTGTGGAGACAGGCCTTTATGTCTaGCAAAATAGCGGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSWDFFSTSQHLFCPCVETGLYV*QNSGPE Trigger: TTCTGGGCCGCTATTTTGCCAGACATAAAGGCCTGT...CTCCACACATGGACAGAAAAGATGCTGCGATGTGGAAAAGAAGTCCCAGGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR TCA 90 bp | CGACTCTGGGCTCTGACCTTTCCAGAACAAAATTGGCCCTTCTTTTGTACCTCCGAAAAATTCAGCAGCTaGAACCTGCTGTCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLWALTFPEQNWPFFCTSEKFSS*NLLSFK Trigger: TTTGAAGGACAGCAGGTTTCAGCTGCTGAATTTTTC...GGAGGTACAAAAGAAGGGCCAATTTTGTTCTGGAAAGGTCAGAGCCCAGAGTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCTTAGGGAGGAACCAGGACTGTaGTGGTGGTGTAACTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVTVNTNKRNWQQGESLREEPGL*WWCNSP Trigger: AGGAGAGTTACACCACCATCACAGTCCTGGTTCCTC...CCTAAGACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | GCACTACTGTACACTTGTCAAAACAGAAAGATGGGCGGTCCCGAAAATGAGATGGACAGTACGGCATGTTaGGGCATTTCATCATCGACT | + |
|
Preference number: 4 (lower is better) Translates to: ALLYTCQNRKMGGPENEMDSTAC*GISSST Trigger: AGTCGATGATGAAATGCCTCAACATGCCGTACTGTC...CATCTCATTTTCGGGACCGCCCATCTTTCTGTTTTGACAAGTGTACAGTAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR GCA 90 bp | AAAACAGAAAGATGGGCGGTCCCGAAAATGAGATGCCAATTCTGTGAACAATGGCTCCTCCCCTTCAACTaGCGTGTCTTTCTGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: KTERWAVPKMRCQFCEQWLLPFN*RVFLDI Trigger: GATATCCAGAAAGACACGGCAGTTGAAGGGGAGGAG...CCATTGTTCACAGAATTGGCATCTCATTTTCGGGACCGCCCATCTTTCTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTTGTGGAGAGTTTTTCCCTTCTTCCCATTAGCAGAAATTTGGTTCACGCCCTCCTCCCCTTCAACTaGCGTGTCTTTCTGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: AFVESFSLLPISRNLVHALLPFN*RVFLDI Trigger: GATATCCAGAAAGACACGGCAGTTGAAGGGGAGGAG...GGCGTGAACCAAATTTCTGCTAATGGGAAGAAGGGAAAAACTCTCCACAAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCTTTGTGTCTGCGTCTGCTaGGTCATCGGCTCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KAVTVNTNKRNWQQGESLCVCVC*VIGSFG Trigger: GCCAAAGGAGCCGATGACGCAGCAGACGCAGACACA...AAGACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCAGCTGTGTCTGCGTCTaGTGCGTCATCGGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILCFCLYIANPKPSQSRISCVCV*CVIGSF Trigger: AAAGGAGCCGATGACGCAGCAGACGCAGACACAGCT...GATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCAAGCTGTGTCTGCGTCTaGTGCGTCATCGGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TFFVFVCTLQIPSLPSLASCVCV*CVIGSF Trigger: AAAGGAGCCGATGACGCAGCAGACGCAGACACAGCT...TGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTGATTATAGCTGTGTCTaGGTCTGCTGCGTCATCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ESSSITVSLSSKQASWTPDYSCV*VCCVIG Trigger: GCCGATGACGCAGCAGACGCAGACACAGCTATAATC...AGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCTCGAGAATCGTGAACTaGTGGTTCTGTCGTCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KVPVSLSLYHLNRPVGHLSRIVN*WFCRRR Trigger: ACGGCGACGACAGAACCAGCAGTTCACGATTCTCGA...GAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085909.9 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | AAAAATCAAGTATACCTAAAAAGGTTCCTTGGTTCGATTCATCAGGTCATCATGTCTGTCCATCACCTGTaGGGATCAGTGCCGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KNQVYLKRFLGSIHQVIMSVHHL*GSVPRP Trigger: CGGCCGCGGCACTGATCCCCACAGGTGATGGACAGA...CATGATGACCTGATGAATCGAACCAAGGAACCTTTTTAGGTATACTTGATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTTGTGGAGAGTTTTTCCCTTCTTCCCATTAGCAGAAATTTGGTTCACGCCAAATGGTCTGCCTGTTaGGGTTCAGGAGCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: AFVESFSLLPISRNLVHAKWSAC*GSGAGS Trigger: TGATCCAGCTCCTGAACCCCAACAGGCAGACCATTT...GGCGTGAACCAAATTTCTGCTAATGGGAAGAAGGGAAAAACTCTCCACAAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCATCAGCATCAGCTGACTaGTCACAGTGTACATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CFCLYIANPKPSQSRISPSASAD*SQCTCP Trigger: CGGACATGTACACTGTGACCAGTCAGCTGATGCTGA...TGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | TCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACGCTGGGGCTTCCCGATaGCTTCACACGTTAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SKVPVSLSLYHLNRPVGHAGASR*LHTLTQ Trigger: TTGAGTTAACGTGTGAAGCCATCGGGAAGCCCCAGC...GTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCTTTGTCAGCTTTTGTGGAGAGTTTTTCCCTTCTTCCCATTAGCAGAAATGCTGGGGCTTCCCGATaGCTTCACACGTTAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PALSAFVESFSLLPISRNAGASR*LHTLTQ Trigger: TTGAGTTAACGTGTGAAGCCATCGGGAAGCCCCAGC...ATTTCTGCTAATGGGAAGAAGGGAAAAACTCTCCACAAAAGCTGACAAAGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTAGAATCGTGAACTGCTaGTTCTGTCGTCGCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ESSSITVSLSSKQASWTPRIVNC*FCRRRG Trigger: ACCACGGCGACGACAGAACCAGCAGTTCACGATTCT...AGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085909.9 ENSMUST00000114548.8 |
||
| 3UTR CAA 72 bp | AACCCTTTCAACGACATGCTAACTGGTTGTCACCCTTaGATATGGTCACTATGGTCAGGATGGGTGCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPFNDMLTGCHP*IWSLWSGWVLR Trigger: CCTTAGCACCCATCCTGACCATAGTGACCATATCAAAGGGTGACAACCAGTTAGCATGTCGTTGAAAGGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | ACATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCAGAGGAACCAGGACTGTaGTGGTGGTGTAACTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TFFVFVCTLQIPSLPSLAEEPGL*WWCNSP Trigger: AGGAGAGTTACACCACCATCACAGTCCTGGTTCCTC...TGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCCACTCCTCCACCTCTaGTTTGCCTTTGAGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESSSITVSLSSKQASWTPPLLHL*FAFEFL Trigger: AAGGAACTCAAAGGCAAATCAGAGGTGGAGGAGTGG...AGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCATTCCACTCCTCCACCTCTaGTTTGCCTTTGAGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VPVSLSLYHLNRPVGHLIPLLHL*FAFEFL Trigger: AAGGAACTCAAAGGCAAATCAGAGGTGGAGGAGTGG...AATGAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | CTGTTCTTCCTGCTTTGTCAGCTTTTGTGGAGAGTTTTTCCCTTCTTCCCATTAACCTTCAGCATCAGCTaGCTGGTCACAGTGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: LFFLLCQLLWRVFPFFPLTFSIS*LVTVYM Trigger: CATGTACACTGTGACCAGTCAGCTGATGCTGAAGGT...TAATGGGAAGAAGGGAAAAACTCTCCACAAAAGCTGACAAAGCAGGAAGAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR TCA 90 bp | AAATCAAGTATACCTAAAAAGGTTCCTTGGTTCGATTCATCAGGTCATCATGTATCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KSSIPKKVPWFDSSGHHVSAGFQ*PQGAPP Trigger: AGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGA...TACATGATGACCTGATGAATCGAACCAAGGAACCTTTTTAGGTATACTTGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR GCA 90 bp | AAATCAAGTATACCTAAAAAGGTTCCTTGGTTCGATTCATCAGGTCATCATGTAACCTGTGGGGATCAGTaGCGCGGCCGAAAGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSSIPKKVPWFDSSGHHVTCGDQ*RGRKEQ Trigger: TTGCTCCTTTCGGCCGCGGCACTGATCCCCACAGGT...TACATGATGACCTGATGAATCGAACCAAGGAACCTTTTTAGGTATACTTGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR GCA 90 bp | CTGAATTTGGAACAGAAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAATGGTCGTCGCTGGCTTaGTGGCCATGGCAGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNLEQKAVTVNTNKRNWQWSSLA*WPWQYS Trigger: ACTGTACTGCCATGGCCAGCAAGCCAGCGACGACCA...TTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTTCTGTTCCAAATTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTGATTATAGCTGTGTCTaGGTCTGCTGCGTCATCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FFVFVCTLQIPSLPSLASDYSCV*VCCVIG Trigger: GCCGATGACGCAGCAGACGCAGACACAGCTATAATC...AGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTTGTGGAGAGTTTTTCCCTTCTTCCCATTAGCAGAAATTTGGTTCACGCCTCACTCTTATTGACCTaGCAGCTGATGGTTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AFVESFSLLPISRNLVHASLLLT*QLMVAT Trigger: AGTGGCAACCATCAGCTGCCAGGTCAATAAGAGTGA...GGCGTGAACCAAATTTCTGCTAATGGGAAGAAGGGAAAAACTCTCCACAAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATCAAGTATACCTAAAAAGGTTCCTTGGTTCGATTCATCAGGTCATCATGCCTGATGGTCGTCGCTaGCTTGCTGGCCATGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KNQVYLKRFLGSIHQVIMPDGRR*LAGHGS Trigger: ACTGCCATGGCCAGCAAGCCAGCGACGACCATCAGG...CATGATGACCTGATGAATCGAACCAAGGAACCTTTTTAGGTATACTTGATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCTTAGGTCAGCATCAGCTGACTaGTCACAGTGTACATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AVTVNTNKRNWQQGESLRSASAD*SQCTCP Trigger: CGGACATGTACACTGTGACCAGTCAGCTGATGCTGA...CCTAAGACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCAGCTGGGGCTTCCCGATaGCTTCACACGTTAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TFFVFVCTLQIPSLPSLAAGASR*LHTLTQ Trigger: TTGAGTTAACGTGTGAAGCCATCGGGAAGCCCCAGC...TGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | CGAATGAAAAACAAGGCACAGAATTTTCTGCAATCTACCGAAACCAAATCCAAGGTTACCATCACAGGCTaGGGCTTCCCGATGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RMKNKAQNFLQSTETKSKVTITG*GFPMAS Trigger: TGAAGCCATCGGGAAGCCCCAGCCTGTGATGGTAAC...CTTGGATTTGGTTTCGGTAGATTGCAGAAAATTCTGTGCCTTGTTTTTCATTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCTTAGGCCTTTCCCACTATGTTaGAAGCCTCACAGCGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVTVNTNKRNWQQGESLRPFPLC*KPHSGK Trigger: CTTACCGCTGTGAGGCTTCCAACATAGTGGGAAAGG...CCTAAGACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | CATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCAGGAGCTGGATCACTaGGTCGTCACTCTTATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HSLFLFVHCKSQAFPVSHQELDH*VVTLID Trigger: GTCAATAAGAGTGACGACTCAGTGATCCAGCTCCTG...ATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | ATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCCAGGAGCTGGATCACTaGGTCGTCACTCTTATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILCFCLYIANPKPSQSRIQELDH*VVTLID Trigger: GTCAATAAGAGTGACGACTCAGTGATCCAGCTCCTG...GATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCGAAAAATTCAGCAGCTaGAACCTGCTGTCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLFVHCKSQAFPVSHLSTEKFSS*NLLSFK Trigger: TTTGAAGGACAGCAGGTTTCAGCTGCTGAATTTTTC...GGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCTTGAGGAACCAGGACTGTaGTGGTGGTGTAACTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAVTVNTNKRNWQQGESLEEPGL*WWCNSP Trigger: AGGAGAGTTACACCACCATCACAGTCCTGGTTCCTC...AAGACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | AAACCACACGAGCTTCTCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAAGAGGAACCAGGACTGTaGTGGTGGTGTAACTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPHELLESSSITVSLSSKEEPGL*WWCNSP Trigger: AGGAGAGTTACACCACCATCACAGTCCTGGTTCCTC...TTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGAGAAGCTCGTGTGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | ATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCCCACTCCTCCACCTCTaGTTTGCCTTTGAGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILCFCLYIANPKPSQSRIPLLHL*FAFEFL Trigger: AAGGAACTCAAAGGCAAATCAGAGGTGGAGGAGTGG...GATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | CATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATACCTTCAGCATCAGCTaGCTGGTCACAGTGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: HSLFLFVHCKSQAFPVSHTFSIS*LVTVYM Trigger: CATGTACACTGTGACCAGTCAGCTGATGCTGAAGGT...ATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCGCTCCTTTGGCTTCATaGGTGAAGTATGTACCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FLFVHCKSQAFPVSHLSTAPLAS*VKYVPL Trigger: TAAAGGTACATACTTCACTCATGAAGCCAAAGGAGC...GGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCCTCCTCCCCTTCAACTaGCGTGTCTTTCTGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: RKQSPLTQIKETGNREKVLLPFN*RVFLDI Trigger: GATATCCAGAAAGACACGGCAGTTGAAGGGGAGGAG...GACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCACTCCTCCCCTTCAACTaGCGTGTCTTTCTGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: TFFVFVCTLQIPSLPSLALLPFN*RVFLDI Trigger: GATATCCAGAAAGACACGGCAGTTGAAGGGGAGGAG...TGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR GCA 90 bp | CTGAATTTGGAACAGAAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAAAGCTGTGTCTGCGTCTaGTGCGTCATCGGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNLEQKAVTVNTNKRNWQSCVCV*CVIGSF Trigger: AAAGGAGCCGATGACGCAGCAGACGCAGACACAGCT...TTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTTCTGTTCCAAATTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCTTGATTATAGCTGTGTCTaGGTCTGCTGCGTCATCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KAVTVNTNKRNWQQGESLDYSCV*VCCVIG Trigger: GCCGATGACGCAGCAGACGCAGACACAGCTATAATC...AAGACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | TCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACTCACTCTTATTGACCTaGCAGCTGATGGTTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SKVPVSLSLYHLNRPVGHSLLLT*QLMVAT Trigger: AGTGGCAACCATCAGCTGCCAGGTCAATAAGAGTGA...GTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAACAAGGCACAGAATTTTCTGCAATCTACCGAAACCAAATCCAAGTACCCAAATGGTCTGCCTGTTaGGGTTCAGGAGCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: EKQGTEFSAIYRNQIQVPKWSAC*GSGAGS Trigger: TGATCCAGCTCCTGAACCCCAACAGGCAGACCATTT...GGGTACTTGGATTTGGTTTCGGTAGATTGCAGAAAATTCTGTGCCTTGTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCAAATGGTCTGCCTGTTaGGGTTCAGGAGCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: RKQSPLTQIKETGNREKVKWSAC*GSGAGS Trigger: TGATCCAGCTCCTGAACCCCAACAGGCAGACCATTT...GACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATTCAGCATCAGCTGACTaGTCACAGTGTACATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HSLFLFVHCKSQAFPVSHSASAD*SQCTCP Trigger: CGGACATGTACACTGTGACCAGTCAGCTGATGCTGA...ATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | CTGAATTTGGAACAGAAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAAGTTACCATCACAGGCTaGGGCTTCCCGATGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNLEQKAVTVNTNKRNWQVTITG*GFPMAS Trigger: TGAAGCCATCGGGAAGCCCCAGCCTGTGATGGTAAC...TTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTTCTGTTCCAAATTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCATTATTGATGAACAGGTTTaGCCCAGACAGTACGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VPVSLSLYHLNRPVGHLIIDEQV*PRQYGM Trigger: CATGCCGTACTGTCTGGGCCAAACCTGTTCATCAAT...AATGAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCATGTACCTTTATGTCTaGCAAAATAGCGGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLFVHCKSQAFPVSHLSTMYLYV*QNSGPE Trigger: TTCTGGGCCGCTATTTTGCCAGACATAAAGGTACAT...GGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTTCCTTGGTTCGATTCATCAGGTCATCATGTAAATATTCCACAGAAAATTAGGTCCGTGAACTGCTaGTTCTGTCGTCGCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVPWFDSSGHHVNIPQKIRSVNC*FCRRRG Trigger: ACCACGGCGACGACAGAACCAGCAGTTCACGGACCT...AATTTTCTGTGGAATATTTACATGATGACCTGATGAATCGAACCAAGGAACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCATTGGAGAAAAATTCAGCAGCTaGAACCTGCTGTCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PVSLSLYHLNRPVGHLIGEKFSS*NLLSFK Trigger: TTTGAAGGACAGCAGGTTTCAGCTGCTGAATTTTTC...TCCAATGAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | AAACCACACGAGCTTCTCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACCATGGCAGTACAGTTaGCTTCAATCTCCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KPHELLESSSITVSLSSKPWQYS*LQSPPL Trigger: AAGGGGAGGAGATTGAAGTCAACTGTACTGCCATGG...TTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGAGAAGCTCGTGTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCTTACCTTCAGCATCAGCTaGCTGGTCACAGTGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: KAVTVNTNKRNWQQGESLTFSIS*LVTVYM Trigger: CATGTACACTGTGACCAGTCAGCTGATGCTGAAGGT...AAGACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | ACATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCAGACAGTACGGCATGTTaGGGCATTTCATCATCGACT | + |
|
Preference number: 4 (lower is better) Translates to: TFFVFVCTLQIPSLPSLADSTAC*GISSST Trigger: AGTCGATGATGAAATGCCTCAACATGCCGTACTGTC...TGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCAGCTCCTTTGGCTTCATaGGTGAAGTATGTACCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CFCLYIANPKPSQSRISPAPLAS*VKYVPL Trigger: TAAAGGTACATACTTCACTCATGAAGCCAAAGGAGC...TGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCACTCTTATTGACCTaGCAGCTGATGGTTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ILCFCLYIANPKPSQSRISLLLT*QLMVAT Trigger: AGTGGCAACCATCAGCTGCCAGGTCAATAAGAGTGA...GATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | AAACCACACGAGCTTCTCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAATCAGCATCAGCTGACTaGTCACAGTGTACATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KPHELLESSSITVSLSSKSASAD*SQCTCP Trigger: CGGACATGTACACTGTGACCAGTCAGCTGATGCTGA...TTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGAGAAGCTCGTGTGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | AAAAATCAAGTATACCTAAAAAGGTTCCTTGGTTCGATTCATCAGGTCATCATGGTTACCATCACAGGCTaGGGCTTCCCGATGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KNQVYLKRFLGSIHQVIMVTITG*GFPMAS Trigger: TGAAGCCATCGGGAAGCCCCAGCCTGTGATGGTAAC...CATGATGACCTGATGAATCGAACCAAGGAACCTTTTTAGGTATACTTGATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CCA 90 bp | CAGAATTTTCTGCAATCTACCGAAACCAAATCCAAGTACCCAAGTTTGACTTGGATTGATGAACAGGTTTaGCCCAGACAGTACGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QNFLQSTETKSKYPSLTWIDEQV*PRQYGM Trigger: CATGCCGTACTGTCTGGGCCAAACCTGTTCATCAAT...CCAAGTCAAACTTGGGTACTTGGATTTGGTTTCGGTAGATTGCAGAAAATTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATATTGATGAACAGGTTTaGCCCAGACAGTACGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: HSLFLFVHCKSQAFPVSHIDEQV*PRQYGM Trigger: CATGCCGTACTGTCTGGGCCAAACCTGTTCATCAAT...ATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | AAACCACACGAGCTTCTCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACCTTTCCCACTATGTTaGAAGCCTCACAGCGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPHELLESSSITVSLSSKPFPLC*KPHSGK Trigger: CTTACCGCTGTGAGGCTTCCAACATAGTGGGAAAGG...TTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGAGAAGCTCGTGTGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | CTGAATTTGGAACAGAAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAAAGAATCGTGAACTGCTaGTTCTGTCGTCGCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LNLEQKAVTVNTNKRNWQRIVNC*FCRRRG Trigger: ACCACGGCGACGACAGAACCAGCAGTTCACGATTCT...TTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTTCTGTTCCAAATTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085909.9 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCTTTGTCAGCTTTTGTGGAGAGTTTTTCCCTTCTTCCCATTAGCAGAAATGAAAAATTCAGCAGCTaGAACCTGCTGTCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PALSAFVESFSLLPISRNEKFSS*NLLSFK Trigger: TTTGAAGGACAGCAGGTTTCAGCTGCTGAATTTTTC...ATTTCTGCTAATGGGAAGAAGGGAAAAACTCTCCACAAAAGCTGACAAAGCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACTTTGGCTTCATGAGTaGAGTATGTACCTTTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: CFCLYIANPKPSQSRISPLWLHE*SMYLYV Trigger: GACATAAAGGTACATACTTCACTCATGAAGCCAAAG...TGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCAGATCATCAAGTTACGTaGAGGAACCAGGACTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TFFVFVCTLQIPSLPSLADHQVT*RNQDCD Trigger: ATCACAGTCCTGGTTCCTCCACGTAACTTGATGATC...TGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCATGTACCTTTATGTCTaGCAAAATAGCGGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KVPVSLSLYHLNRPVGHLMYLYV*QNSGPE Trigger: TTCTGGGCCGCTATTTTGCCAGACATAAAGGTACAT...GAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | AACATACAGATTGGCCTCAACCCAGTGGGCCTTTTCAATTCAACACAACCAAGAGACCTTGAATATAAATaGGGACGAGAAGAGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: NIQIGLNPVGLFNSTQPRDLEYK*GREEHF Trigger: GAAATGCTCTTCTCGTCCCCATTTATATTCAAGGTC...TCTTGGTTGTGTTGAATTGAAAAGGCCCACTGGGTTGAGGCCAATCTGTATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
||
| 3UTR CAA 72 bp | CCTACAGATAAAGAATTAACGACAGATTCAATCTCATaGCGACACACCTCACTTGCAGATAACCCTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: PTDKELTTDSIS*RHTSLADNPVQ Trigger: CTGTACAGGGTTATCTGCAAGTGAGGTGTGTCGCAATGAGATTGAATCTGTCGTTAATTCTTTATCTGTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | CTGAATTTGGAACAGAAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAAGACAGTACGGCATGTTaGGGCATTTCATCATCGACT | + |
|
Preference number: 4 (lower is better) Translates to: LNLEQKAVTVNTNKRNWQDSTAC*GISSST Trigger: AGTCGATGATGAAATGCCTCAACATGCCGTACTGTC...TTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTTCTGTTCCAAATTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCCTTTGGCTTCATGAGTaGAGTATGTACCTTTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KVPVSLSLYHLNRPVGHLLWLHE*SMYLYV Trigger: GACATAAAGGTACATACTTCACTCATGAAGCCAAAG...GAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | TCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTTTGGCTTCATGAGTaGAGTATGTACCTTTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKVPVSLSLYHLNRPVGHLWLHE*SMYLYV Trigger: GACATAAAGGTACATACTTCACTCATGAAGCCAAAG...GTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | ATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCGCTCCTTTGGCTTCATaGGTGAAGTATGTACCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ILCFCLYIANPKPSQSRIAPLAS*VKYVPL Trigger: TAAAGGTACATACTTCACTCATGAAGCCAAAGGAGC...GATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | AAACTGAATTTGGAACAGAAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGAAATGGTCTGCCTGTTaGGGTTCAGGAGCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: KLNLEQKAVTVNTNKRNWKWSAC*GSGAGS Trigger: TGATCCAGCTCCTGAACCCCAACAGGCAGACCATTT...CCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTTCTGTTCCAAATTCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | AAACCACACGAGCTTCTCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAAGATCATCAAGTTACGTaGAGGAACCAGGACTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPHELLESSSITVSLSSKDHQVT*RNQDCD Trigger: ATCACAGTCCTGGTTCCTCCACGTAACTTGATGATC...TTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGAGAAGCTCGTGTGGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCTTGATCATCAAGTTACGTaGAGGAACCAGGACTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KAVTVNTNKRNWQQGESLDHQVT*RNQDCD Trigger: ATCACAGTCCTGGTTCCTCCACGTAACTTGATGATC...AAGACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | CAGAATTTTCTGCAATCTACCGAAACCAAATCCAAGTACCCAAGTTTGACTTGGATGTACCTTTATGTCTaGCAAAATAGCGGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QNFLQSTETKSKYPSLTWMYLYV*QNSGPE Trigger: TTCTGGGCCGCTATTTTGCCAGACATAAAGGTACAT...CCAAGTCAAACTTGGGTACTTGGATTTGGTTTCGGTAGATTGCAGAAAATTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR TCA 90 bp | AAACCACACGAGCTTCTCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAAGAAAAATTCAGCAGCTaGAACCTGCTGTCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KPHELLESSSITVSLSSKEKFSS*NLLSFK Trigger: TTTGAAGGACAGCAGGTTTCAGCTGCTGAATTTTTC...TTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGAGAAGCTCGTGTGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR TCA 90 bp | CAGAATTTTCTGCAATCTACCGAAACCAAATCCAAGTACCCAAGTTTGACTTGGCTTTGGCTTCATGAGTaGAGTATGTACCTTTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: QNFLQSTETKSKYPSLTWLWLHE*SMYLYV Trigger: GACATAAAGGTACATACTTCACTCATGAAGCCAAAG...CCAAGTCAAACTTGGGTACTTGGATTTGGTTTCGGTAGATTGCAGAAAATTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CCA 90 bp | AAACTGAATTTGGAACAGAAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGATTGATGAACAGGTTTaGCCCAGACAGTACGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KLNLEQKAVTVNTNKRNWIDEQV*PRQYGM Trigger: CATGCCGTACTGTCTGGGCCAAACCTGTTCATCAAT...CCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTTCTGTTCCAAATTCAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR CAA 72 bp | CAGAGTGTACTTTCAAAGAACATTCTTTGTTTTTGTTaGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QSVLSKNILCFC*YIANPKPSQSR Trigger: GCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATGTTCTTTGAAAGTACACTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| 3UTR CAA 72 bp | GAAAGGCATGGTGAAATTTCAGTGCTTGGAGAAAGTTaGTTCTTTAAGCGTTGGGTTCTTAGCAAGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ERHGEISVLGES*FFKRWVLSKMD Trigger: ATCCATCTTGCTAAGAACCCAACGCTTAAAGAACAAACTTTCTCCAAGCACTGAAATTTCACCATGCCTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
||
| 3UTR CAA 72 bp | AATAACAATGAAATAAAATCCCTAGGAAGCAAAACCTaGGCCCAGTGGCCTAGTGCCACTCCCATTATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NNNEIKSLGSKT*AQWPSATPIIK Trigger: TTTTATAATGGGAGTGGCACTAGGCCACTGGGCCAAGGTTTTGCTTCCTAGGGATTTTATTTCATTGTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| 3UTR CAA 72 bp | ACAGCAGAGTGTACTTTCAAAGAACATTCTTTGTTTTaGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TAECTFKEHSLF*FVHCKSQAFPV Trigger: GACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATGTTCTTTGAAAGTACACTCTGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | GGCACCCAGGCTGGTGAGGTGAGTCTCAGCTCACCTCGGCTGGCTTTCCTGGGAACCCCGTCGTCCTCCTaGTGCACCTTCAGCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GTQAGEVSLSSPRLAFLGTPSSS*CTFSIS Trigger: GCTGATGCTGAAGGTGCACAAGGAGGACGACGGGGT...TCCCAGGAAAGCCAGCCGAGGTGAGCTGAGACTCACCTCACCAGCCTGGGTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS GCA 90 bp | GAATATAAATGGGGACGAGAAGAGCATTTCTCCTGTGGGGATCAGTaGCGCGGCCGAAAGGAGCAACAGCAGGAGCCGGAGCCGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EYKWGREEHFSCGDQ*RGRKEQQQEPEPEP Trigger: GGGCTCCGGCTCCGGCTCCTGCTGTTGCTCCTTTCGGCCGCGGCACTGATCCCCACAGGAGAAATGCTCTTCTCGTCCCCATTTATATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
||
| CDS CCA 90 bp | AGCATGGCAAACACCACCACGGCTACGACGCCACCAATCACTGCGTaGTCCACTGCCCCAATGGTCCCCTCTTCACCTGCTCGAGAATCG | + |
|
Preference number: 5 (lower is better) Translates to: SMANTTTATTPPITA*STAPMVPSSPARES Trigger: CGATTCTCGAGCAGGTGAAGAGGGGACCATTGGGGCAGTGGACCACGCAGTGATTGGTGGCGTCGTAGCCGTGGTGGTGTTTGCCATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114548.8 ENSMUST00000143026.9 |
||
| CDS TCA 90 bp | GTTTATACTGCACTTCTAGATAGCGCTGGGTCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCTGGCAGATCACCGGGACCCCGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: VYTALLDSAGSAGFQ*PQGAPPGRSPGPRR Trigger: ACGACGGGGTCCCGGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGACCCAGCGCTATCTAGAAGTGCAGTATAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
||
| CDS GCA 90 bp | ACCAATCACTGCGTGGTCCACTGCCCCAATGGTCCCCTCTTCACCTaGTCGAGAATCGTGAACTGCTGGTTCTGTCGTCGCCGTGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TNHCVVHCPNGPLFT*SRIVNCWFCRRRGV Trigger: GACACCACGGCGACGACAGAACCAGCAGTTCACGATTCTCGAGCAGGTGAAGAGGGGACCATTGGGGCAGTGGACCACGCAGTGATTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085909.9 ENSMUST00000114548.8 |
||
| CDS GCA 90 bp | AAACACCACCACGGCTACGACGCCACCAATCACTGCGTGGTCCACTaGCCCAATGGTCCCCTCTTCACCTGCTCGAGAATCGTGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: KHHHGYDATNHCVVH*PNGPLFTCSRIVNC Trigger: GCAGTTCACGATTCTCGAGCAGGTGAAGAGGGGACCATTGGGGCAGTGGACCACGCAGTGATTGGTGGCGTCGTAGCCGTGGTGGTGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085909.9 ENSMUST00000114548.8 |
||
| CDS CCA 90 bp | CCGGGACCCCGTCGTCCTCCTTGTGCACCTTCAGCATCAGCTGACTaGTCACAGTGTACATGTCCGACCACTCCTCCACCTCTGATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGPRRPPCAPSASAD*SQCTCPTTPPPLIC Trigger: GCAAATCAGAGGTGGAGGAGTGGTCGGACATGTACACTGTGACCAGTCAGCTGATGCTGAAGGTGCACAAGGAGGACGACGGGGTCCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
||
| CDS CCA 90 bp | AGCATGGCAAACACCACCACGGCTACGACGCCACCAATCACTGCGTaGTCCACTGCCCCAATGGTCCCCTCTTCACCTGCTCGAGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: SMANTTTATTPPITA*STAPMVPSSPARES Trigger: AGATTCTCGAGCAGGTGAAGAGGGGACCATTGGGGCAGTGGACCACGCAGTGATTGGTGGCGTCGTAGCCGTGGTGGTGTTTGCCATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000152459.8 |
||
| CDS TCA 90 bp | ATCACCGGGACCCCGTCGTCCTCCTTGTGCACCTTCAGCATCAGCTaGCTGGTCACAGTGTACATGTCCGACCACTCCTCCACCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ITGTPSSSLCTFSIS*LVTVYMSDHSSTSD Trigger: ATCAGAGGTGGAGGAGTGGTCGGACATGTACACTGTGACCAGTCAGCTGATGCTGAAGGTGCACAAGGAGGACGACGGGGTCCCGGTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
||
| CDS GCA 90 bp | AAACACCACCACGGCTACGACGCCACCAATCACTGCGTGGTCCACTaGCCCAATGGTCCCCTCTTCACCTGCTCGAGAATCTGTGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: KHHHGYDATNHCVVH*PNGPLFTCSRICDD Trigger: ATCATCACAGATTCTCGAGCAGGTGAAGAGGGGACCATTGGGGCAGTGGACCACGCAGTGATTGGTGGCGTCGTAGCCGTGGTGGTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114547.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCAGTCACACGGCACACGGACTTGCTCTCTCCTGCATTAGTGAGCAGTAAGACCCCGTCGTCCTCCTaGTGCACCTTCAGCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QSVTRHTDLLSPALVSSKTPSSS*CTFSIS Trigger: GCTGATGCTGAAGGTGCACAAGGAGGACGACGGGGT...CTTACTGCTCACTAATGCAGGAGAGAGCAAGTCCGTGTGCCGTGTGACTGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS GCA 90 bp | AAACACCACCACGGCTACGACGCCACCAATCACTGCGTGGTCCACTaGCCCAATGGTCCCCTCTTCACCTGCTCGAGAATCGTATACATA | + |
|
Preference number: 5 (lower is better) Translates to: KHHHGYDATNHCVVH*PNGPLFTCSRIVYI Trigger: TATGTATACGATTCTCGAGCAGGTGAAGAGGGGACCATTGGGGCAGTGGACCACGCAGTGATTGGTGGCGTCGTAGCCGTGGTGGTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034581.4 ENSMUST00000143026.9 |
||
| CDS CCA 90 bp | TGCCCCAATGGTCCCCTCTTCACCTGCTCGAGAATCGTGAACTGCTaGTTCTGTCGTCGCCGTGGTGTCTGTGATGATGGTAAGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: CPNGPLFTCSRIVNC*FCRRRGVCDDGKDG Trigger: ACCATCCTTACCATCATCACAGACACCACGGCGACGACAGAACCAGCAGTTCACGATTCTCGAGCAGGTGAAGAGGGGACCATTGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085909.9 |
||
| CDS CCA 90 bp | GCCTTTGAGTTCCTTGTTCCCTTTGAACCACCTGATGGTCGTCGCTaGCTTGCTGGCCATGGCAGTACAGTTGACTTCAATCTCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AFEFLVPFEPPDGRR*LAGHGSTVDFNLLP Trigger: GGGGAGGAGATTGAAGTCAACTGTACTGCCATGGCCAGCAAGCCAGCGACGACCATCAGGTGGTTCAAAGGGAACAAGGAACTCAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
||
| CDS-3UTR CAA 90 bp | CCATCAAGAACAGCTGTGAGCAGCAGCAATGGGCTTTGGCAGCGAAGCAGGAGCGAGTCGTCACTCTTATaGACCTGGCAGCTGATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PSRTAVSSSNGLWQRSRSESSLL*TWQLMV Trigger: AACCATCAGCTGCCAGGTCAATAAGAGTGACGACTC...GCTCCTGCTTCGCTGCCAAAGCCCATTGCTGCTGCTCACAGCTGTTCTTGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR CAA 90 bp | GGTGGGAGCTGGGAATCCCAGCAGGACAAGTGTCCCAGCAGGACGGTGTCTGTAACCTCTGATTTGCCTTaGAGTTCCTTGTTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGSWESQQDKCPSRTVSVTSDLP*SSLFPL Trigger: CAAAGGGAACAAGGAACTCAAAGGCAAATCAGAGGT...TACAGACACCGTCCTGCTGGGACACTTGTCCTGCTGGGATTCCCAGCTCCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGCTGCCCAAGGGAACGTCCATCCCAGAGACTTCTAACTAAGGGCTGCCTGTCCTCCACCTCTGATTaGCCTTTGAGTTCCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGCPRERPSQRLLTKGCLSSTSD*PLSSLF Trigger: GAACAAGGAACTCAAAGGCAAATCAGAGGTGGAGGA...CAGGCAGCCCTTAGTTAGAAGTCTCTGGGATGGACGTTCCCTTGGGCAGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS CCA 90 bp | TGCCCCAATGGTCCCCTCTTCACCTGCTCGAGAATCGTGAACTGCTaGTTCTGTCGTCGCCGTGGTGTCGTATACATACAGCATATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CPNGPLFTCSRIVNC*FCRRRGVVYIQHIV Trigger: GACTATATGCTGTATGTATACGACACCACGGCGACGACAGAACCAGCAGTTCACGATTCTCGAGCAGGTGAAGAGGGGACCATTGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGGATTCCAACCCTATGCTGAGAGGGCACTGATAGCCGCCTTCTGTCTCGCCATGGCAGTACAGTaGACTTCAATCTCCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KEGFQPYAERALIAAFCLAMAVQ*TSISSP Trigger: AGGGGAGGAGATTGAAGTCAACTGTACTGCCATGGC...GAGACAGAAGGCGGCTATCAGTGCCCTCTCAGCATAGGGTTGGAATCCTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR CAA 90 bp | GCTGAGACAAAGGGCTCCAGAGGCAGAGACTTGCGGGTGTGGATAGAAACCAACAGTTCCTTGTTCCCTTaGAACCACCTGATGGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: AETKGSRGRDLRVWIETNSSLFP*NHLMVV Trigger: GACGACCATCAGGTGGTTCAAAGGGAACAAGGAACT...GTTGGTTTCTATCCACACCCGCAAGTCTCTGCCTCTGGAGCCCTTTGTCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS TCA 90 bp | CCTGAAGTAAATGGTCTGCCTGTTGGGGTTCAGGAGCTGGATCACTaGGTCGTCACTCTTATTGACCTGGCAGCTGATGGTTGCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PEVNGLPVGVQELDH*VVTLIDLAADGCHF Trigger: GAAGTGGCAACCATCAGCTGCCAGGTCAATAAGAGTGACGACTCAGTGATCCAGCTCCTGAACCCCAACAGGCAGACCATTTACTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
||
| CDS-3UTR CAA 90 bp | GAGTCTCAGCTCACCTCGGCTGGCTTTCCTGGGACTTCTTTTCCACATCGCAGCACCTCTGATTTGCCTTaGAGTTCCTTGTTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ESQLTSAGFPGTSFPHRSTSDLP*SSLFPL Trigger: CAAAGGGAACAAGGAACTCAAAGGCAAATCAGAGGT...GCTGCGATGTGGAAAAGAAGTCCCAGGAAAGCCAGCCGAGGTGAGCTGAGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS TCA 90 bp | GTTTCCAAACTGCATATCAAGGCTGCAACGCAATCTTCAGGTCCGTaGACTGCTGGTTCTGTCGTCGCCGTGGTGTCGTATACATACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSKLHIKAATQSSGP*TAGSVVAVVSYTYS Trigger: GCTGTATGTATACGACACCACGGCGACGACAGAACCAGCAGTTCACGGACCTGAAGATTGCGTTGCAGCCTTGATATGCAGTTTGGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS GCA 90 bp | ACCAATCACTGCGTGGTCCACTGCCCCAATGGTCCCCTCTTCACCTaGTCGAGAATCGTATACATACAGCATATAGTCCGAATGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TNHCVVHCPNGPLFT*SRIVYIQHIVRMSL Trigger: AAGGCTCATTCGGACTATATGCTGTATGTATACGATTCTCGAGCAGGTGAAGAGGGGACCATTGGGGCAGTGGACCACGCAGTGATTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034581.4 ENSMUST00000143026.9 |
||
| CDS CCA 90 bp | TTGGGGTTCAGGAGCTGGATCACTGAGTCGTCACTCTTATTGACCTaGCAGCTGATGGTTGCCACTTCTCCTTCAATCACTGTCACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGFRSWITESSLLLT*QLMVATSPSITVTS Trigger: AGACGTGACAGTGATTGAAGGAGAAGTGGCAACCATCAGCTGCCAGGTCAATAAGAGTGACGACTCAGTGATCCAGCTCCTGAACCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
||
| CDS-3UTR CAA 90 bp | GTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCCACTCGAGTCGTCACTCTTATaGACCTGGCAGCTGATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VCTLQIPSLPSLASLHPLESSLL*TWQLMV Trigger: AACCATCAGCTGCCAGGTCAATAAGAGTGACGACTC...GAGTGGGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS GCA 90 bp | GCTGGCCATGGCAGTACAGTTGACTTCAATCTCCTCCCCTTCAACTaGCGTGTCTTTCTGGATATCGATCATCAAGTTACGTGGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AGHGSTVDFNLLPFN*RVFLDIDHQVTWRN Trigger: GTTCCTCCACGTAACTTGATGATCGATATCCAGAAAGACACGGCAGTTGAAGGGGAGGAGATTGAAGTCAACTGTACTGCCATGGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
||
| CDS CCA 90 bp | ACTGCATATCAAGGCTGCAACGCAATCTTCAGGTCCGTGAACTGCTaGTTCTGTCGTCGCCGTGGTGTCGTATACATACAGCATATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TAYQGCNAIFRSVNC*FCRRRGVVYIQHIV Trigger: GACTATATGCTGTATGTATACGACACCACGGCGACGACAGAACCAGCAGTTCACGGACCTGAAGATTGCGTTGCAGCCTTGATATGCAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CAA 90 bp | CCATCAAGAACAGCTGTGAGCAGCAGCAATGGGCTTTGGCAGCGAAGCAGGAGCTTCGTCAGTGACACTTaGAGTTCACTGCTAGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSRTAVSSSNGLWQRSRSFVSDT*SSLLEK Trigger: TTTTTCTAGCAGTGAACTCAAAGTGTCACTGACGAA...GCTCCTGCTTCGCTGCCAAAGCCCATTGCTGCTGCTCACAGCTGTTCTTGATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR CAA 90 bp | ACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCCACTCATAAAAGCCATGGCAGTACAGTaGACTTCAATCTCCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TLQIPSLPSLASLHPLIKAMAVQ*TSISSP Trigger: AGGGGAGGAGATTGAAGTCAACTGTACTGCCATGGC...TTTTATGAGTGGGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCTTAGGACCCCGTCGTCCTCCTaGTGCACCTTCAGCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVTVNTNKRNWQQGESLRTPSSS*CTFSIS Trigger: GCTGATGCTGAAGGTGCACAAGGAGGACGACGGGGT...CCTAAGACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTCCCAGTATTTGAAGCCTCTCCCTTCTGGGCTGCCCAAGGGAACGTCCATAGACAGTACGGCATGTaGAGGCATTTCATCATCGAC | + |
|
Preference number: 5 (lower is better) Translates to: IFPVFEASPFWAAQGNVHRQYGM*RHFIID Trigger: GTCGATGATGAAATGCCTCAACATGCCGTACTGTCT...ATGGACGTTCCCTTGGGCAGCCCAGAAGGGAGAGGCTTCAAATACTGGGAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS GCA 90 bp | CAAACTGCATATCAAGGCTGCAACGCAATCTTCAGGTCCGTGAACTaGTGGTTCTGTCGTCGCCGTGGTGTCGTATACATACAGCATATA | + |
|
Preference number: 5 (lower is better) Translates to: QTAYQGCNAIFRSVN*WFCRRRGVVYIQHI Trigger: TATATGCTGTATGTATACGACACCACGGCGACGACAGAACCAGCAGTTCACGGACCTGAAGATTGCGTTGCAGCCTTGATATGCAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CAA 90 bp | TGCGAGATGAGTAGTTTTTGGCAGATGGTTCTTAAGGCTGAGGTAAGAGGCCAGGAGTCGTCACTCTTATaGACCTGGCAGCTGATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CEMSSFWQMVLKAEVRGQESSLL*TWQLMV Trigger: AACCATCAGCTGCCAGGTCAATAAGAGTGACGACTC...CTGGCCTCTTACCTCAGCCTTAAGAACCATCTGCCAAAAACTACTCATCTCGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCGCCATGGCAGTACAGTaGACTTCAATCTCCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: FLFVHCKSQAFPVSHLSTAMAVQ*TSISSP Trigger: AGGGGAGGAGATTGAAGTCAACTGTACTGCCATGGC...GGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | ACCCTGTACAGTAATGAAGATCCACAGCAGACGACAGCGTCTGGGTCACAGTCTACCTCTGATTTGCCTTaGAGTTCCTTGTTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TLYSNEDPQQTTASGSQSTSDLP*SSLFPL Trigger: CAAAGGGAACAAGGAACTCAAAGGCAAATCAGAGGT...AGACTGTGACCCAGACGCTGTCGTCTGCTGTGGATCTTCATTACTGTACAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTAGGAAGCAAAACCTTGGCCCAGTGGCCTAGTGCCACTCCCATTATAAAATCCTCCACCTCTGATTaGCCTTTGAGTTCCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLGSKTLAQWPSATPIIKSSTSD*PLSSLF Trigger: GAACAAGGAACTCAAAGGCAAATCAGAGGTGGAGGA...TTTTATAATGGGAGTGGCACTAGGCCACTGGGCCAAGGTTTTGCTTCCTAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCAACCCCGTCGTCCTCCTaGTGCACCTTCAGCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TFFVFVCTLQIPSLPSLATPSSS*CTFSIS Trigger: GCTGATGCTGAAGGTGCACAAGGAGGACGACGGGGT...TGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCAGTTCCTTGTTCCCTTaGAACCACCTGATGGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: FLFVHCKSQAFPVSHLSTSSLFP*NHLMVV Trigger: GACGACCATCAGGTGGTTCAAAGGGAACAAGGAACT...GGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | AAACCACACGAGCTTCTCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAAACCCCGTCGTCCTCCTaGTGCACCTTCAGCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KPHELLESSSITVSLSSKTPSSS*CTFSIS Trigger: GCTGATGCTGAAGGTGCACAAGGAGGACGACGGGGT...TTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGAGAAGCTCGTGTGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS TCA 90 bp | TTTAGGTTATTGATGAACAGGTTTGGCCCAGACAGTACGGCATGTTaGGGCATTTCATCATCGACTCTCACCCAAGTTACCATCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FRLLMNRFGPDSTAC*GISSSTLTQVTITG Trigger: GCCTGTGATGGTAACTTGGGTGAGAGTCGATGATGAAATGCCTCAACATGCCGTACTGTCTGGGCCAAACCTGTTCATCAATAACCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
||
| CDS-3UTR CAA 90 bp | AAAACAGAAAGATGGGCGGTCCCGAAAATGAGATGCCAATTCTGTGAACAATGGGAGTCGTCACTCTTATaGACCTGGCAGCTGATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KTERWAVPKMRCQFCEQWESSLL*TWQLMV Trigger: AACCATCAGCTGCCAGGTCAATAAGAGTGACGACTC...CCATTGTTCACAGAATTGGCATCTCATTTTCGGGACCGCCCATCTTTCTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTGCCATGGCAGTACAGTaGACTTCAATCTCCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: ESSSITVSLSSKQASWTPAMAVQ*TSISSP Trigger: AGGGGAGGAGATTGAAGTCAACTGTACTGCCATGGC...AGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCAAGTTCCTTGTTCCCTTaGAACCACCTGATGGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: CFCLYIANPKPSQSRISPSSLFP*NHLMVV Trigger: GACGACCATCAGGTGGTTCAAAGGGAACAAGGAACT...TGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGGCCTACACTTTGCAATCTACCTGAGACGGAAAAACACCAATTGAAACACAGACAGTACGGCATGTaGAGGCATTTCATCATCGAC | + |
|
Preference number: 5 (lower is better) Translates to: VGPTLCNLPETEKHQLKHRQYGM*RHFIID Trigger: GTCGATGATGAAATGCCTCAACATGCCGTACTGTCT...GTGTTTCAATTGGTGTTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCAGACAGTACGGCATGTaGAGGCATTTCATCATCGAC | + |
|
Preference number: 5 (lower is better) Translates to: FLFVHCKSQAFPVSHLSTRQYGM*RHFIID Trigger: GTCGATGATGAAATGCCTCAACATGCCGTACTGTCT...GGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | ACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCACCCACTCATAAAATTCTTTTCTTCGGAGTaGTTCTGTCCTCCTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TLQIPSLPSLASLHPLIKFFSSE*FCPPSA Trigger: TGCAGAAGGAGGACAGAACAACTCCGAAGAAAAGAA...TTTTATGAGTGGGTGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | AAATCCCTATATGCCACTTTCCCACCTCGACTCTGGGCTCTGACCTTTCCAGAATTCGTCAGTGACACTTaGAGTTCACTGCTAGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KSLYATFPPRLWALTFPEFVSDT*SSLLEK Trigger: TTTTTCTAGCAGTGAACTCAAAGTGTCACTGACGAA...TTCTGGAAAGGTCAGAGCCCAGAGTCGAGGTGGGAAAGTGGCATATAGGGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | CTGATACTTCCACCACCAGCCATAAGAGTTCAGACGCCCCCGGTAGTTTTAATCTTCGTCAGTGACACTTaGAGTTCACTGCTAGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LILPPPAIRVQTPPVVLIFVSDT*SSLLEK Trigger: TTTTTCTAGCAGTGAACTCAAAGTGTCACTGACGAA...GATTAAAACTACCGGGGGCGTCTGAACTCTTATGGCTGGTGGTGGAAGTATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CAA 90 bp | CAGAATTTTCTGCAATCTACCGAAACCAAATCCAAGTACCCAAGTTTGACTTGGGCCATGGCAGTACAGTaGACTTCAATCTCCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QNFLQSTETKSKYPSLTWAMAVQ*TSISSP Trigger: AGGGGAGGAGATTGAAGTCAACTGTACTGCCATGGC...CCAAGTCAAACTTGGGTACTTGGATTTGGTTTCGGTAGATTGCAGAAAATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | TCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACAGTTCCTTGTTCCCTTaGAACCACCTGATGGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SKVPVSLSLYHLNRPVGHSSLFP*NHLMVV Trigger: GACGACCATCAGGTGGTTCAAAGGGAACAAGGAACT...GTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATCAAGTATACCTAAAAAGGTTCCTTGGTTCGATTCATCAGGTCATCATGACCCCGTCGTCCTCCTaGTGCACCTTCAGCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KNQVYLKRFLGSIHQVIMTPSSS*CTFSIS Trigger: GCTGATGCTGAAGGTGCACAAGGAGGACGACGGGGT...CATGATGACCTGATGAATCGAACCAAGGAACCTTTTTAGGTATACTTGATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CAA 90 bp | GCATCTGATCACTTGGCCATGTCGTGGAAACTGATACTTCCACCACCAGCCATAGTTTTGTTTAGGTTATaGATGAACAGGTTTGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASDHLAMSWKLILPPPAIVLFRL*MNRFGP Trigger: TGGGCCAAACCTGTTCATCAATAACCTAAACAAAAC...TATGGCTGGTGGTGGAAGTATCAGTTTCCACGACATGGCCAAGTGATCAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCATGTCCTCCTTCTGCATaGATTATAGCTGTGTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: CFCLYIANPKPSQSRISPCPPSA*IIAVSA Trigger: CGCAGACACAGCTATAATCAATGCAGAAGGAGGACA...TGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCAGAGTCGTCACTCTTATaGACCTGGCAGCTGATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TFFVFVCTLQIPSLPSLAESSLL*TWQLMV Trigger: AACCATCAGCTGCCAGGTCAATAAGAGTGACGACTC...TGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTTGTGGAGAGTTTTTCCCTTCTTCCCATTAGCAGAAATTTGGTTCACGCCACCTCTGATTTGCCTTaGAGTTCCTTGTTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AFVESFSLLPISRNLVHATSDLP*SSLFPL Trigger: CAAAGGGAACAAGGAACTCAAAGGCAAATCAGAGGT...GGCGTGAACCAAATTTCTGCTAATGGGAAGAAGGGAAAAACTCTCCACAAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCTTAGGTCCTCCACCTCTGATTaGCCTTTGAGTTCCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVTVNTNKRNWQQGESLRSSTSD*PLSSLF Trigger: GAACAAGGAACTCAAAGGCAAATCAGAGGTGGAGGA...CCTAAGACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCATTTCCTCCACCTCTGATTaGCCTTTGAGTTCCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VPVSLSLYHLNRPVGHLISSTSD*PLSSLF Trigger: GAACAAGGAACTCAAAGGCAAATCAGAGGTGGAGGA...AATGAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTGGGACTTCTTTTCCACATCGCAGCATCTTTTCTGTCCATGTGTGGAGGTTTTGTTTAGGTTATaGATGAACAGGTTTGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSWDFFSTSQHLFCPCVEVLFRL*MNRFGP Trigger: TGGGCCAAACCTGTTCATCAATAACCTAAACAAAAC...CTCCACACATGGACAGAAAAGATGCTGCGATGTGGAAAAGAAGTCCCAGGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143026.9 |
||
| CDS-3UTR CAA 90 bp | ACACACGGATGTGGAGTTTCTTACACTGTAACATGGTCCTTGTACACCTTAGAATGTCCTCCTTCTGCATaGATTATAGCTGTGTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: THGCGVSYTVTWSLYTLECPPSA*IIAVSA Trigger: CGCAGACACAGCTATAATCAATGCAGAAGGAGGACA...TTCTAAGGTGTACAAGGACCATGTTACAGTGTAAGAAACTCCACATCCGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | TCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACTGTCCTCCTTCTGCATaGATTATAGCTGTGTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SKVPVSLSLYHLNRPVGHCPPSA*IIAVSA Trigger: CGCAGACACAGCTATAATCAATGCAGAAGGAGGACA...GTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCATTCTTTTCTTCGGAGTaGTTCTGTCCTCCTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CFCLYIANPKPSQSRISPFFSSE*FCPPSA Trigger: TGCAGAAGGAGGACAGAACAACTCCGAAGAAAAGAA...TGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS CCA 90 bp | CGTATACATACAGCATATAGTCCGAATGAGCCTTTCCCACTATGTTaGAAGCCTCACAGCGGTAAGTACCGTTATCTGTTTTGTTTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RIHTAYSPNEPFPLC*KPHSGKYRYLFCLG Trigger: ACCTAAACAAAACAGATAACGGTACTTACCGCTGTGAGGCTTCCAACATAGTGGGAAAGGCTCATTCGGACTATATGCTGTATGTATACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
||
| CDS-3UTR CAA 90 bp | CGAATGAAAAACAAGGCACAGAATTTTCTGCAATCTACCGAAACCAAATCCAAGAGTTCCTTGTTCCCTTaGAACCACCTGATGGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RMKNKAQNFLQSTETKSKSSLFP*NHLMVV Trigger: GACGACCATCAGGTGGTTCAAAGGGAACAAGGAACT...CTTGGATTTGGTTTCGGTAGATTGCAGAAAATTCTGTGCCTTGTTTTTCATTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCATTACCTCTGATTTGCCTTaGAGTTCCTTGTTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VPVSLSLYHLNRPVGHLITSDLP*SSLFPL Trigger: CAAAGGGAACAAGGAACTCAAAGGCAAATCAGAGGT...AATGAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCACCTCTGATTTGCCTTaGAGTTCCTTGTTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KVPVSLSLYHLNRPVGHLTSDLP*SSLFPL Trigger: CAAAGGGAACAAGGAACTCAAAGGCAAATCAGAGGT...GAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTTCCTCCACCTCTGATTaGCCTTTGAGTTCCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFVFVCTLQIPSLPSLASSSTSD*PLSSLF Trigger: GAACAAGGAACTCAAAGGCAAATCAGAGGTGGAGGA...AGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | GAAAAACAAGGCACAGAATTTTCTGCAATCTACCGAAACCAAATCCAAGTACCCAGACAGTACGGCATGTaGAGGCATTTCATCATCGAC | + |
|
Preference number: 5 (lower is better) Translates to: EKQGTEFSAIYRNQIQVPRQYGM*RHFIID Trigger: GTCGATGATGAAATGCCTCAACATGCCGTACTGTCT...GGGTACTTGGATTTGGTTTCGGTAGATTGCAGAAAATTCTGTGCCTTGTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCAGACAGTACGGCATGTaGAGGCATTTCATCATCGAC | + |
|
Preference number: 5 (lower is better) Translates to: ILCFCLYIANPKPSQSRIRQYGM*RHFIID Trigger: GTCGATGATGAAATGCCTCAACATGCCGTACTGTCT...GATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | CAGAATTTTCTGCAATCTACCGAAACCAAATCCAAGTACCCAAGTTTGACTTGGTGTCCTCCTTCTGCATaGATTATAGCTGTGTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: QNFLQSTETKSKYPSLTWCPPSA*IIAVSA Trigger: CGCAGACACAGCTATAATCAATGCAGAAGGAGGACA...CCAAGTCAAACTTGGGTACTTGGATTTGGTTTCGGTAGATTGCAGAAAATTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCATTTTCTTTTCTTCGGAGTaGTTCTGTCCTCCTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPVSLSLYHLNRPVGHLIFFSSE*FCPPSA Trigger: TGCAGAAGGAGGACAGAACAACTCCGAAGAAAAGAA...AATGAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTCTCCATTCGTCAGTGACACTTaGAGTTCACTGCTAGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CFCLYIANPKPSQSRISPFVSDT*SSLLEK Trigger: TTTTTCTAGCAGTGAACTCAAAGTGTCACTGACGAA...TGGAGAGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATCAAGTATACCTAAAAAGGTTCCTTGGTTCGATTCATCAGGTCATCATGGCCATGGCAGTACAGTaGACTTCAATCTCCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KNQVYLKRFLGSIHQVIMAMAVQ*TSISSP Trigger: AGGGGAGGAGATTGAAGTCAACTGTACTGCCATGGC...CATGATGACCTGATGAATCGAACCAAGGAACCTTTTTAGGTATACTTGATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CAA 90 bp | CGAATGAAAAACAAGGCACAGAATTTTCTGCAATCTACCGAAACCAAATCCAAGTCCTCCACCTCTGATTaGCCTTTGAGTTCCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RMKNKAQNFLQSTETKSKSSTSD*PLSSLF Trigger: GAACAAGGAACTCAAAGGCAAATCAGAGGTGGAGGA...CTTGGATTTGGTTTCGGTAGATTGCAGAAAATTCTGTGCCTTGTTTTTCATTCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTTCTTTTCTTCGGAGTaGTTCTGTCCTCCTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ILCFCLYIANPKPSQSRIFFSSE*FCPPSA Trigger: TGCAGAAGGAGGACAGAACAACTCCGAAGAAAAGAA...GATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTTCCTTGGTTCGATTCATCAGGTCATCATGTAAATATTCCACAGAAAATTAGTTCCTTGTTCCCTTaGAACCACCTGATGGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: KVPWFDSSGHHVNIPQKISSLFP*NHLMVV Trigger: GACGACCATCAGGTGGTTCAAAGGGAACAAGGAACT...AATTTTCTGTGGAATATTTACATGATGACCTGATGAATCGAACCAAGGAACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
||
| CDS-3UTR CAA 90 bp | TCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACGTTTTGTTTAGGTTATaGATGAACAGGTTTGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SKVPVSLSLYHLNRPVGHVLFRL*MNRFGP Trigger: TGGGCCAAACCTGTTCATCAATAACCTAAACAAAAC...GTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGTATCACTGTCTCTTTATCATCTAAACAGGCCAGTTGGACACCTCATTGTTTTGTTTAGGTTATaGATGAACAGGTTTGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VPVSLSLYHLNRPVGHLIVLFRL*MNRFGP Trigger: TGGGCCAAACCTGTTCATCAATAACCTAAACAAAAC...AATGAGGTGTCCAACTGGCCTGTTTAGATGATAAAGAGACAGTGATACTGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | GAAAAACAAGGCACAGAATTTTCTGCAATCTACCGAAACCAAATCCAAGTACCCTTCGTCAGTGACACTTaGAGTTCACTGCTAGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: EKQGTEFSAIYRNQIQVPFVSDT*SSLLEK Trigger: TTTTTCTAGCAGTGAACTCAAAGTGTCACTGACGAA...GGGTACTTGGATTTGGTTTCGGTAGATTGCAGAAAATTCTGTGCCTTGTTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTGTTTTTGTTTGTACATTGCAAATCCCAAGCCTTCCCAGTCTCGCATCTTTCGTCAGTGACACTTaGAGTTCACTGCTAGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FFVFVCTLQIPSLPSLASFVSDT*SSLLEK Trigger: TTTTTCTAGCAGTGAACTCAAAGTGTCACTGACGAA...AGATGCGAGACTGGGAAGGCTTGGGATTTGCAATGTACAAACAAAAACAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
||
| CDS-3UTR CAA 90 bp | AAATCAAGTATACCTAAAAAGGTTCCTTGGTTCGATTCATCAGGTCATCATGTAAGACAGTACGGCATGTaGAGGCATTTCATCATCGAC | + |
|
Preference number: 5 (lower is better) Translates to: KSSIPKKVPWFDSSGHHVRQYGM*RHFIID Trigger: GTCGATGATGAAATGCCTCAACATGCCGTACTGTCT...TACATGATGACCTGATGAATCGAACCAAGGAACCTTTTTAGGTATACTTGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
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| CDS-3UTR CAA 90 bp | AAAGCAGTCACCGTTAACACAAATAAAAGAAACTGGCAACAGGGAGAAAGTCTTGTTTTGTTTAGGTTATaGATGAACAGGTTTGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: KAVTVNTNKRNWQQGESLVLFRL*MNRFGP Trigger: TGGGCCAAACCTGTTCATCAATAACCTAAACAAAAC...AAGACTTTCTCCCTGTTGCCAGTTTCTTTTATTTGTGTTAACGGTGACTGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 |
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| CDS-3UTR CAA 90 bp | AAACCACACGAGCTTCTCGAAAGTTCCAGTATCACTGTCTCTTTATCATCTAAAGTTTTGTTTAGGTTATaGATGAACAGGTTTGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: KPHELLESSSITVSLSSKVLFRL*MNRFGP Trigger: TGGGCCAAACCTGTTCATCAATAACCTAAACAAAAC...TTTAGATGATAAAGAGACAGTGATACTGGAACTTTCGAGAAGCTCGTGTGGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
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| CDS GCA 72 bp | GAGCCCTGGAGGCGCCGCCGCCGCCGCCACAGCCGCTaGCGCCGCACACTGGGATCCGCTCGGCAGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: EPWRRRRRRHSR*RRTLGSARQHS Trigger: GCTGTGCTGCCGAGCGGATCCCAGTGTGCGGCGGCAGCGGCTGTGGCGGCGGCGGCGGCGCCTCCAGGGCTC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000214542.2 ENSMUST00000239368.2 |
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| CDS CCA 72 bp | CGAAAGGAGCAACAGCAGGAGCCGGAGCCGGAGCCCTaGAGGCGCCGCCGCCGCCGCCACAGCCGCTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RKEQQQEPEPEP*RRRRRRHSRCR Trigger: GCGGCAGCGGCTGTGGCGGCGGCGGCGGCGCCTCCAGGGCTCCGGCTCCGGCTCCTGCTGTTGCTCCTTTCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000214542.2 ENSMUST00000239368.2 |
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| CDS GCA 72 bp | GGCAAACACCACCACGGCTACGACGCCACCAATCACTaGGTGGTCCACTGCCCCAATGGTCCCCTCTTCACC | + |
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Preference number: 6 (lower is better) Translates to: GKHHHGYDATNH*VVHCPNGPLFT Trigger: GGTGAAGAGGGGACCATTGGGGCAGTGGACCACGCAGTGATTGGTGGCGTCGTAGCCGTGGTGGTGTTTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 |
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| CDS GCA 72 bp | TGGGGACGAGAAGAGCATTTCTCCTGTGGGGATCAGTaGCGCGGCCGAAAGGAGCAACAGCAGGAGCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: WGREEHFSCGDQ*RGRKEQQQEPE Trigger: CTCCGGCTCCTGCTGTTGCTCCTTTCGGCCGCGGCACTGATCCCCACAGGAGAAATGCTCTTCTCGTCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
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| CDS TCA 72 bp | GCACTTCTAGATAGCGCTGGGTCTGCAGGTTTCCAGTaGCCGCAGGGTGCTCCACCTGGCAGATCACCGGGA | + |
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Preference number: 6 (lower is better) Translates to: ALLDSAGSAGFQ*PQGAPPGRSPG Trigger: TCCCGGTGATCTGCCAGGTGGAGCACCCTGCGGTCACTGGAAACCTGCAGACCCAGCGCTATCTAGAAGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS TCA 72 bp | GCCCCAATGGTCCCCTCTTCACCTGCTCGAGAATCGTaGACTGCTGGTTCTGTCGTCGCCGTGGTGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: APMVPSSPARES*TAGSVVAVVSV Trigger: CACAGACACCACGGCGACGACAGAACCAGCAGTTCACGATTCTCGAGCAGGTGAAGAGGGGACCATTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085909.9 |
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| CDS GCA 72 bp | TGCGTGGTCCACTGCCCCAATGGTCCCCTCTTCACCTaGTCGAGAATCGTGAACTGCTGGTTCTGTCGTCGC | + |
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Preference number: 6 (lower is better) Translates to: CVVHCPNGPLFT*SRIVNCWFCRR Trigger: GCGACGACAGAACCAGCAGTTCACGATTCTCGAGCAGGTGAAGAGGGGACCATTGGGGCAGTGGACCACGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085909.9 ENSMUST00000114548.8 |
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| CDS TCA 72 bp | ACCCCGTCGTCCTCCTTGTGCACCTTCAGCATCAGCTaGCTGGTCACAGTGTACATGTCCGACCACTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TPSSSLCTFSIS*LVTVYMSDHSS Trigger: GGAGGAGTGGTCGGACATGTACACTGTGACCAGTCAGCTGATGCTGAAGGTGCACAAGGAGGACGACGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS TCA 72 bp | GCCCCAATGGTCCCCTCTTCACCTGCTCGAGAATCGTaGACTGCTGGTTCTGTCGTCGCCGTGGTGTCGTAT | + |
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Preference number: 6 (lower is better) Translates to: APMVPSSPARES*TAGSVVAVVSY Trigger: ATACGACACCACGGCGACGACAGAACCAGCAGTTCACGATTCTCGAGCAGGTGAAGAGGGGACCATTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114548.8 |
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| CDS GCA 72 bp | AGTAAACAGATTCTGTCCATCACCTGTGGGGATCAGTaGCGCGGCCGAAAGGAGCAACAGCAGGAGCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: SKQILSITCGDQ*RGRKEQQQEPE Trigger: CTCCGGCTCCTGCTGTTGCTCCTTTCGGCCGCGGCACTGATCCCCACAGGTGATGGACAGAATCTGTTTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS CCA 72 bp | AGGAACCAGGACTGTGATGGTGGTGTAACTCTCCTGTaGGGGGTCCGTGTAGAGCTGGCAGAAGTATCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RNQDCDGGVTLL*GVRVELAEVSP Trigger: GGGAGATACTTCTGCCAGCTCTACACGGACCCCCCACAGGAGAGTTACACCACCATCACAGTCCTGGTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS CCA 72 bp | CGTCGTCCTCCTTGTGCACCTTCAGCATCAGCTGACTaGTCACAGTGTACATGTCCGACCACTCCTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: RRPPCAPSASAD*SQCTCPTTPPP Trigger: AGGTGGAGGAGTGGTCGGACATGTACACTGTGACCAGTCAGCTGATGCTGAAGGTGCACAAGGAGGACGACG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS CCA 72 bp | GGTCCCCTCTTCACCTGCTCGAGAATCGTGAACTGCTaGTTCTGTCGTCGCCGTGGTGTCTGTGATGATGGT | + |
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Preference number: 6 (lower is better) Translates to: GPLFTCSRIVNC*FCRRRGVCDDG Trigger: ACCATCATCACAGACACCACGGCGACGACAGAACCAGCAGTTCACGATTCTCGAGCAGGTGAAGAGGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085909.9 |
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| CDS TCA 72 bp | TGGTCGTCGCTGGCTTGCTGGCCATGGCAGTACAGTTaGCTTCAATCTCCTCCCCTTCAACTGCCGTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: WSSLACWPWQYS*LQSPPLQLPCL Trigger: AAGACACGGCAGTTGAAGGGGAGGAGATTGAAGTCAACTGTACTGCCATGGCCAGCAAGCCAGCGACGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS CCA 72 bp | GGTCCCCTCTTCACCTGCTCGAGAATCGTGAACTGCTaGTTCTGTCGTCGCCGTGGTGTCGTATACATACAG | + |
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Preference number: 6 (lower is better) Translates to: GPLFTCSRIVNC*FCRRRGVVYIQ Trigger: CTGTATGTATACGACACCACGGCGACGACAGAACCAGCAGTTCACGATTCTCGAGCAGGTGAAGAGGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114548.8 |
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| CDS CAA 72 bp | ATGGTCGTCGCTGGCTTGCTGGCCATGGCAGTACAGTaGACTTCAATCTCCTCCCCTTCAACTGCCGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: MVVAGLLAMAVQ*TSISSPSTAVS Trigger: AGACACGGCAGTTGAAGGGGAGGAGATTGAAGTCAACTGTACTGCCATGGCCAGCAAGCCAGCGACGACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS CCA 72 bp | TCACCCAAGTTACCATCACAGGCTGGGGCTTCCCGATaGCTTCACACGTTAACTCAAATGCATCCCCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: SPKLPSQAGASR*LHTLTQMHPLP Trigger: GGGAAGGGGATGCATTTGAGTTAACGTGTGAAGCCATCGGGAAGCCCCAGCCTGTGATGGTAACTTGGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS CCA 72 bp | CAAGGCTGCAACGCAATCTTCAGGTCCGTGAACTGCTaGTTCTGTCGTCGCCGTGGTGTCGTATACATACAG | + |
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Preference number: 6 (lower is better) Translates to: QGCNAIFRSVNC*FCRRRGVVYIQ Trigger: CTGTATGTATACGACACCACGGCGACGACAGAACCAGCAGTTCACGGACCTGAAGATTGCGTTGCAGCCTTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
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| CDS CAA 90 bp | AACCACCTGATGGTCGTCGCTGGCTTGCTGGCCATGGCAGTACAGTaGACTTCAATCTCCTCCCCTTCAACTGCCGTGTCTTTCTGGATA | + |
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Preference number: 6 (lower is better) Translates to: NHLMVVAGLLAMAVQ*TSISSPSTAVSFWI Trigger: TATCCAGAAAGACACGGCAGTTGAAGGGGAGGAGATTGAAGTCAACTGTACTGCCATGGCCAGCAAGCCAGCGACGACCATCAGGTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS TCA 72 bp | AATGGTCTGCCTGTTGGGGTTCAGGAGCTGGATCACTaGGTCGTCACTCTTATTGACCTGGCAGCTGATGGT | + |
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Preference number: 6 (lower is better) Translates to: NGLPVGVQELDH*VVTLIDLAADG Trigger: ACCATCAGCTGCCAGGTCAATAAGAGTGACGACTCAGTGATCCAGCTCCTGAACCCCAACAGGCAGACCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS GCA 72 bp | TGCGTGGTCCACTGCCCCAATGGTCCCCTCTTCACCTaGTCGAGAATCGTATACATACAGCATATAGTCCGA | + |
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Preference number: 6 (lower is better) Translates to: CVVHCPNGPLFT*SRIVYIQHIVR Trigger: TCGGACTATATGCTGTATGTATACGATTCTCGAGCAGGTGAAGAGGGGACCATTGGGGCAGTGGACCACGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034581.4 ENSMUST00000143026.9 |
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| CDS GCA 72 bp | AATGGTCCCCTCTTCACCTGCTCGAGAATCGTGAACTaGTGGTTCTGTCGTCGCCGTGGTGTCGTATACATA | + |
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Preference number: 6 (lower is better) Translates to: NGPLFTCSRIVN*WFCRRRGVVYI Trigger: TATGTATACGACACCACGGCGACGACAGAACCAGCAGTTCACGATTCTCGAGCAGGTGAAGAGGGGACCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114548.8 |
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| CDS CAA 72 bp | TTGTTCCCTTTGAACCACCTGATGGTCGTCGCTGGCTaGCTGGCCATGGCAGTACAGTTGACTTCAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: LFPLNHLMVVAG*LAMAVQLTSIS Trigger: GGAGATTGAAGTCAACTGTACTGCCATGGCCAGCAAGCCAGCGACGACCATCAGGTGGTTCAAAGGGAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS CAA 90 bp | TTGAGTTCCTTGTTCCCTTTGAACCACCTGATGGTCGTCGCTGGCTaGCTGGCCATGGCAGTACAGTTGACTTCAATCTCCTCCCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LSSLFPLNHLMVVAG*LAMAVQLTSISSPS Trigger: TGAAGGGGAGGAGATTGAAGTCAACTGTACTGCCATGGCCAGCAAGCCAGCGACGACCATCAGGTGGTTCAAAGGGAACAAGGAACTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS GCA 72 bp | TATCAAGGCTGCAACGCAATCTTCAGGTCCGTGAACTaGTGGTTCTGTCGTCGCCGTGGTGTCGTATACATA | + |
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Preference number: 6 (lower is better) Translates to: YQGCNAIFRSVN*WFCRRRGVVYI Trigger: TATGTATACGACACCACGGCGACGACAGAACCAGCAGTTCACGGACCTGAAGATTGCGTTGCAGCCTTGATA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239368.2 |
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| CDS CCA 72 bp | TTCCTTGTTCCCTTTGAACCACCTGATGGTCGTCGCTaGCTTGCTGGCCATGGCAGTACAGTTGACTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: FLVPFEPPDGRR*LAGHGSTVDFN Trigger: ATTGAAGTCAACTGTACTGCCATGGCCAGCAAGCCAGCGACGACCATCAGGTGGTTCAAAGGGAACAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS CCA 72 bp | AGGAGCTGGATCACTGAGTCGTCACTCTTATTGACCTaGCAGCTGATGGTTGCCACTTCTCCTTCAATCACT | + |
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Preference number: 6 (lower is better) Translates to: RSWITESSLLLT*QLMVATSPSIT Trigger: AGTGATTGAAGGAGAAGTGGCAACCATCAGCTGCCAGGTCAATAAGAGTGACGACTCAGTGATCCAGCTCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS CAA 72 bp | TACATGTCCGACCACTCCTCCACCTCTGATTTGCCTTaGAGTTCCTTGTTCCCTTTGAACCACCTGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: YMSDHSSTSDLP*SSLFPLNHLMV Trigger: GACCATCAGGTGGTTCAAAGGGAACAAGGAACTCAAAGGCAAATCAGAGGTGGAGGAGTGGTCGGACATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS TCA 72 bp | TTGATGAACAGGTTTGGCCCAGACAGTACGGCATGTTaGGGCATTTCATCATCGACTCTCACCCAAGTTACC | + |
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Preference number: 6 (lower is better) Translates to: LMNRFGPDSTAC*GISSSTLTQVT Trigger: GGTAACTTGGGTGAGAGTCGATGATGAAATGCCTCAACATGCCGTACTGTCTGGGCCAAACCTGTTCATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS CAA 90 bp | AAGTACTCTTTCTTTTCTTCGGAGTTGTTCTGTCCTCCTTCTGCATaGATTATAGCTGTGTCTGCGTCTGCTGCGTCATCGGCTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: KYSFFSSELFCPPSA*IIAVSASAASSAPL Trigger: CAAAGGAGCCGATGACGCAGCAGACGCAGACACAGCTATAATCAATGCAGAAGGAGGACAGAACAACTCCGAAGAAAAGAAAGAGTACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000152459.8 |
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| CDS TCA 72 bp | GACACTTTGAGTTCACTGCTAGAAAAATTCAGCAGCTaGAACCTGCTGTCCTTCAAAGGCCTGAAGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: DTLSSLLEKFSS*NLLSFKGLKSL Trigger: CAGGGACTTCAGGCCTTTGAAGGACAGCAGGTTTCAGCTGCTGAATTTTTCTAGCAGTGAACTCAAAGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS GCA 72 bp | GGCAGTACAGTTGACTTCAATCTCCTCCCCTTCAACTaGCGTGTCTTTCTGGATATCGATCATCAAGTTACG | + |
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Preference number: 6 (lower is better) Translates to: GSTVDFNLLPFN*RVFLDIDHQVT Trigger: CGTAACTTGATGATCGATATCCAGAAAGACACGGCAGTTGAAGGGGAGGAGATTGAAGTCAACTGTACTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS CCA 72 bp | TCAAACTGTCTGACCTTCCACGACCTTGAATATAAATaGGGACGAGAAGAGCATTTCTCCTGTGGGGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: SNCLTFHDLEYK*GREEHFSCGDQ Trigger: CTGATCCCCACAGGAGAAATGCTCTTCTCGTCCCCATTTATATTCAAGGTCGTGGAAGGTCAGACAGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214542.2 |
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| CDS CAA 72 bp | ATTGATGAACAGGTTTGGCCCAGACAGTACGGCATGTaGAGGCATTTCATCATCGACTCTCACCCAAGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: IDEQVWPRQYGM*RHFIIDSHPSY Trigger: GTAACTTGGGTGAGAGTCGATGATGAAATGCCTCAACATGCCGTACTGTCTGGGCCAAACCTGTTCATCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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| CDS CCA 72 bp | ACAGCATATAGTCCGAATGAGCCTTTCCCACTATGTTaGAAGCCTCACAGCGGTAAGTACCGTTATCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: TAYSPNEPFPLC*KPHSGKYRYLF Trigger: AAACAGATAACGGTACTTACCGCTGTGAGGCTTCCAACATAGTGGGAAAGGCTCATTCGGACTATATGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000034581.4 ENSMUST00000085909.9 ENSMUST00000114547.8 ENSMUST00000114548.8 ENSMUST00000143026.9 ENSMUST00000152459.8 ENSMUST00000239368.2 |
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