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Pregenerated sensors for CACYBP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000014226

Ensembl transcript IDs: ENSMUST00000014370.11

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTATCATTAATGCTTCATCTCCCTACAAACGCCAAATCTCCTGCATaGAATAAGTTCATGTGTTTACCAGTCTGCTTACTTCACAGCTCA +
Preference number: 1 (lower is better)
Translates to: LSLMLHLPTNAKSPA*NKFMCLPVCLLHSS
Trigger: TGAGCTGTGAAGTAAGCAGACTGGTAAACACATGAACTTATTGCATGCAGGAGATTTGGCGTTTGTAGGGAGATGAAGCATTAATGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
3UTR TCA 90 bp CCATTGCTAAGCCCTTACGGCTTTCTGAAACTTACTCGAGTACAGTaGCAAAGCTTAACTTTGAATACACTCAAAACAGATTGCAGAACT +
Preference number: 1 (lower is better)
Translates to: PLLSPYGFLKLTRVQ*QSLTLNTLKTDCRT
Trigger: AGTTCTGCAATCTGTTTTGAGTGTATTCAAAGTTAAGCTTTGTCACTGTACTCGAGTAAGTTTCAGAAAGCCGTAAGGGCTTAGCAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
3UTR CCA 90 bp TTTATTTTTGACAGTGAGATCTTAGATGCTGTAAGTGTGAGCATATaGCTGTCTTATTACACTGCTATCATTAATGCTTCATCTCCCTAC +
Preference number: 1 (lower is better)
Translates to: FIFDSEILDAVSVSI*LSYYTAIINASSPY
Trigger: GTAGGGAGATGAAGCATTAATGATAGCAGTGTAATAAGACAGCCATATGCTCACACTTACAGCATCTAAGATCTCACTGTCAAAAATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
3UTR-3UTR TCA 90 bp GTTCATGTGTTTACCAGTCTGCTTACTTCACAGCTCAATACACTTCCAGCTACCGCCCTTACGGCTTTCTaGAACTTACTCGAGTACAGT +
Preference number: 2 (lower is better)
Translates to: VHVFTSLLTSQLNTLPATALTAF*NLLEYS
Trigger: ACTGTACTCGAGTAAGTTTCAGAAAGCCGTAAGGGC...GGTAGCTGGAAGTGTATTGAGCTGTGAAGTAAGCAGACTGGTAAACACATGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
3UTR-3UTR CCA 90 bp AACGCCAAATCTCCTGCATGCAATAAGTTCATGTGTTTACCAGTCTGCTTACTTCTGAAACGAAATGTCTaGGGTGCTAATGAAGGAAAC +
Preference number: 2 (lower is better)
Translates to: NAKSPACNKFMCLPVCLLLKRNV*GANEGN
Trigger: GTTTCCTTCATTAGCACCCCAGACATTTCGTTTCAG...AAGTAAGCAGACTGGTAAACACATGAACTTATTGCATGCAGGAGATTTGGCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
3UTR-3UTR TCA 90 bp CAGACAAACACTTCTGTATTCTATCTCCCAGCCAGAACAAAAGTCTGTGACATAAACTACATACCCACATaGACAAATATGTGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: QTNTSVFYLPARTKVCDINYIPT*TNMCSS
Trigger: TGAACTGCACATATTTGTTCATGTGGGTATGTAGTT...TATGTCACAGACTTTTGTTCTGGCTGGGAGATAGAATACAGAAGTGTTTGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
3UTR-3UTR CCA 90 bp CAGACAAACACTTCTGTATTCTATCTCCCAGCCAGAACAAAAGTCTGTGACATATCCTCCAGTAAGAAATaGAGAATCTGCTATCTTTAC +
Preference number: 2 (lower is better)
Translates to: QTNTSVFYLPARTKVCDISSSKK*RICYLY
Trigger: GTAAAGATAGCAGATTCTCCATTTCTTACTGGAGGA...TATGTCACAGACTTTTGTTCTGGCTGGGAGATAGAATACAGAAGTGTTTGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
3UTR-3UTR CCA 90 bp AGTGTGAGCATATGGCTGTCTTATTACACTGCTATCATTAATGCTTCATCTCCCCAAGTTTTCGCGTCATaGTTATTTTTAAGCCATCTG +
Preference number: 2 (lower is better)
Translates to: SVSIWLSYYTAIINASSPQVFAS*LFLSHL
Trigger: CAGATGGCTTAAAAATAACCATGACGCGAAAACTTG...GGGAGATGAAGCATTAATGATAGCAGTGTAATAAGACAGCCATATGCTCACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
3UTR GCA 72 bp ATGCTTCATCTCCCTACAAACGCCAAATCTCCTGCATaGAATAAGTTCATGTGTTTACCAGTCTGCTTACTT +
Preference number: 3 (lower is better)
Translates to: MLHLPTNAKSPA*NKFMCLPVCLL
Trigger: AAGTAAGCAGACTGGTAAACACATGAACTTATTGCATGCAGGAGATTTGGCGTTTGTAGGGAGATGAAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
3UTR CCA 72 bp GACAGTGAGATCTTAGATGCTGTAAGTGTGAGCATATaGCTGTCTTATTACACTGCTATCATTAATGCTTCA +
Preference number: 3 (lower is better)
Translates to: DSEILDAVSVSI*LSYYTAIINAS
Trigger: TGAAGCATTAATGATAGCAGTGTAATAAGACAGCCATATGCTCACACTTACAGCATCTAAGATCTCACTGTC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
3UTR TCA 72 bp TTCTGTATTCTATCTCCCAGCCAGAACAAAAGTCTGTaGCATAACATTTTCATTATGCAAGACTTCCTTTTT +
Preference number: 3 (lower is better)
Translates to: FCILSPSQNKSL*HNIFIMQDFLF
Trigger: AAAAAGGAAGTCTTGCATAATGAAAATGTTATGTCACAGACTTTTGTTCTGGCTGGGAGATAGAATACAGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
CDS-3UTR GCA 90 bp CAGACAAACACTTCTGTATTCTATCTCCCAGCCAGAACAAAAGTCTGTGACATAGTGTCTTCTCTGGCTTaGTTCTCTCTGGATTCCACC +
Preference number: 4 (lower is better)
Translates to: QTNTSVFYLPARTKVCDIVSSLA*FSLDST
Trigger: GGTGGAATCCAGAGAGAAGCAAGCCAGAGAAGACAC...TATGTCACAGACTTTTGTTCTGGCTGGGAGATAGAATACAGAAGTGTTTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
CDS-3UTR TCA 90 bp CAGACAAACACTTCTGTATTCTATCTCCCAGCCAGAACAAAAGTCTGTGACATATACCAGAAGATCAAATaGCCTCTCTGTGAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: QTNTSVFYLPARTKVCDIYQKIK*PLCEVH
Trigger: GTGCACTTCACAGAGAGGTCATTTGATCTTCTGGTA...TATGTCACAGACTTTTGTTCTGGCTGGGAGATAGAATACAGAAGTGTTTGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
CDS-3UTR TCA 90 bp CTGGGATCTAATGTCAACTACAGACAAACACTTCTGTATTCTATCTCCCAGCCATTTCCAGCAATACTTTaGCCTCTTCTAGGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LGSNVNYRQTLLYSISQPFPAIL*PLLGLS
Trigger: AGAAAGACCTAGAAGAGGTCAAAGTATTGCTGGAAA...TGGCTGGGAGATAGAATACAGAAGTGTTTGTCTGTAGTTGACATTAGATCCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
CDS-3UTR GCA 90 bp GCAATAAGTTCATGTGTTTACCAGTCTGCTTACTTCACAGCTCAATACACTTCCTCTTCTAGGTCTTTCTaGAACTCTTCCAAAACGGAA +
Preference number: 4 (lower is better)
Translates to: AISSCVYQSAYFTAQYTSSSRSF*NSSKTE
Trigger: TTCCGTTTTGGAAGAGTTGCAGAAAGACCTAGAAGA...GGAAGTGTATTGAGCTGTGAAGTAAGCAGACTGGTAAACACATGAACTTATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
CDS-3UTR CCA 90 bp AGTGTGAGCATATGGCTGTCTTATTACACTGCTATCATTAATGCTTCATCTCCCTTCATTATCAAGTTCTaGTTTCTTCTGCGACTTCTG +
Preference number: 4 (lower is better)
Translates to: SVSIWLSYYTAIINASSPFIIKF*FLLRLL
Trigger: CAGAAGTCGCAGAAGAAACCAGAACTTGATAATGAA...GGGAGATGAAGCATTAATGATAGCAGTGTAATAAGACAGCCATATGCTCACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
CDS-3UTR CAA 90 bp AGTGTGAGCATATGGCTGTCTTATTACACTGCTATCATTAATGCTTCATCTCCCCGTGTCTTCTCTGGCTaGCTTCTCTCTGGATTCCAC +
Preference number: 5 (lower is better)
Translates to: SVSIWLSYYTAIINASSPRVFSG*LLSGFH
Trigger: GTGGAATCCAGAGAGAAGCAAGCCAGAGAAGACACG...GGGAGATGAAGCATTAATGATAGCAGTGTAATAAGACAGCCATATGCTCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11
CDS-3UTR CAA 90 bp CTGGGATCTAATGTCAACTACAGACAAACACTTCTGTATTCTATCTCCCAGCCATTAAGTAGTCCCATCTaGTGTTTTCTGCTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: LGSNVNYRQTLLYSISQPLSSPI*CFLLSF
Trigger: GAAAGAAAGCAGAAAACACAAGATGGGACTACTTAA...TGGCTGGGAGATAGAATACAGAAGTGTTTGTCTGTAGTTGACATTAGATCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014370.11