Pregenerated sensors for CACUL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033417Ensembl transcript IDs: ENSMUST00000081790.15, ENSMUST00000111460.5, ENSMUST00000166712.9
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGGTATCCTCTCTGAGAACAGCCTTTGACAGAGCTCCTGAGTGGTaGAGGCCTCACTGTGCCTGGAACAGTTTCTGTAGCTCCAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: PVSSLRTAFDRAPEW*RPHCAWNSFCSSSV Trigger: CACACTGGAGCTACAGAAACTGTTCCAGGCACAGTGAGGCCTGCACCACTCAGGAGCTCTGTCAAAGGCTGTTCTCAGAGAGGATACCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR GCA 90 bp | TTACTGGTTACCAGGACGAATCCATCAGCAGCACACTCACTTTCCTaGCCCACGCCTTTCAGTACCAGCACAGTGGTACCCACCCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: LLVTRTNPSAAHSLS*PTPFSTSTVVPTQL Trigger: GAGCTGGGTGGGTACCACTGTGCTGGTACTGAAAGGCGTGGGGCAGGAAAGTGAGTGTGCTGCTGATGGATTCGTCCTGGTAACCAGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR GCA 90 bp | CTGTATGTGCTCCTCTTCCCATTACCTGCAGAAACCAGTTTTGTCTaGAAGCTCACCATGGCCTCTGCTAGTAGGTGTAGGAAGCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: LYVLLFPLPAETSFV*KLTMASASRCRKPL Trigger: AAGAGGCTTCCTACACCTACTAGCAGAGGCCATGGTGAGCTTGCAGACAAAACTGGTTTCTGCAGGTAATGGGAAGAGGAGCACATACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR CCA 90 bp | TCTGAGACATCAACTTCTTCAGGAAGCATCGTGAGATTGATGACATaGTCACATAGCTGCAAAGTGCACAAAGCTCAAGGCACACAGTTG | + |
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Preference number: 1 (lower is better) Translates to: SETSTSSGSIVRLMT*SHSCKVHKAQGTQL Trigger: CAACTGTGTGCCTTGAGCTTTGTGCACTTTGCAGCTATGTGACCATGTCATCAATCTCACGATGCTTCCTGAAGAAGTTGATGTCTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR GCA 90 bp | ACTTCTTCAGGAAGCATCGTGAGATTGATGACATGGTCACATAGCTaGAAAGTGCACAAAGCTCAAGGCACACAGTTGAAAACGGGAATT | + |
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Preference number: 1 (lower is better) Translates to: TSSGSIVRLMTWSHS*KVHKAQGTQLKTGI Trigger: AATTCCCGTTTTCAACTGTGTGCCTTGAGCTTTGTGCACTTTGCAGCTATGTGACCATGTCATCAATCTCACGATGCTTCCTGAAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR CCA 90 bp | ATTTCAGCTGAAGTTTTACAAACTGTAAAGCCTTGCTTAACTTACTaGTTACCAGGACGAATCCATCAGCAGCACACTCACTTTCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: ISAEVLQTVKPCLTY*LPGRIHQQHTHFPA Trigger: GGCAGGAAAGTGAGTGTGCTGCTGATGGATTCGTCCTGGTAACCAGTAAGTTAAGCAAGGCTTTACAGTTTGTAAAACTTCAGCTGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR TCA 90 bp | TTTCCCCTCGACATTAGAGCAGAAAAGGCTGTACAGACCATAGTATaGGTCCACTTGTCCCTACTCAGATTCTTCAATATAACCCAAATG | + |
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Preference number: 1 (lower is better) Translates to: FPLDIRAEKAVQTIV*VHLSLLRFFNITQM Trigger: CATTTGGGTTATATTGAAGAATCTGAGTAGGGACAAGTGGACTCATACTATGGTCTGTACAGCCTTTTCTGCTCTAATGTCGAGGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR GCA 90 bp | CAAGAAGTGTCCATTTCAGCTGAAGTTTTACAAACTGTAAAGCCTTaGTTAACTTACTGGTTACCAGGACGAATCCATCAGCAGCACACT | + |
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Preference number: 1 (lower is better) Translates to: QEVSISAEVLQTVKP*LTYWLPGRIHQQHT Trigger: AGTGTGCTGCTGATGGATTCGTCCTGGTAACCAGTAAGTTAAGCAAGGCTTTACAGTTTGTAAAACTTCAGCTGAAATGGACACTTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR TCA 90 bp | ACACATTTGCCCTTTAGCCAAATCAACTGTATTTCAGTGACTAACTaGGCTACACAAAATTTGAGCTTTAAGGATCTGATTGAGAAAGCG | + |
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Preference number: 1 (lower is better) Translates to: THLPFSQINCISVTN*ATQNLSFKDLIEKA Trigger: CGCTTTCTCAATCAGATCCTTAAAGCTCAAATTTTGTGTAGCTCAGTTAGTCACTGAAATACAGTTGATTTGGCTAAAGGGCAAATGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR CCA 90 bp | CCCAAGAGGGATCCAGGGAGTAGCTCCCACTGTTGGCAGTCTCTACAGTATCATGACAGAGCTCCTGAGTaGTGCAGGCCTCACTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: PKRDPGSSSHCWQSLQYHDRAPE*CRPHCA Trigger: GGCACAGTGAGGCCTGCACCACTCAGGAGCTCTGTC...ATGATACTGTAGAGACTGCCAACAGTGGGAGCTACTCCCTGGATCCCTCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR-3UTR CCA 90 bp | TGGTTACCAGGACGAATCCATCAGCAGCACACTCACTTTCCTGCCCCACGCCTTTCAGTACCAGCACAGTaGTACCCACCCAGCTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: WLPGRIHQQHTHFPAPRLSVPAQ*YPPSSD Trigger: GTCAGAGCTGGGTGGGTACCACTGTGCTGGTACTGA...AAGGCGTGGGGCAGGAAAGTGAGTGTGCTGCTGATGGATTCGTCCTGGTAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR TCA 90 bp | TGGTTACCAGGACGAATCCATCAGCAGCACACTCACTTTCCTGCCCCACGCCTTGTCCGGTATCCTCTCTaGGAACAGCCTTTGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: WLPGRIHQQHTHFPAPRLVRYPL*EQPLTE Trigger: CTCTGTCAAAGGCTGTTCTCAGAGAGGATACCGGAC...AAGGCGTGGGGCAGGAAAGTGAGTGTGCTGCTGATGGATTCGTCCTGGTAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR CCA 90 bp | GCACACTCACTTTCCTGCCCCACGCCTTTCAGTACCAGCACAGTGGTACCCACCAGTAGCTCCCACTGTTaGCAGTCTCTACAGTATCAT | + |
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Preference number: 2 (lower is better) Translates to: AHSLSCPTPFSTSTVVPTSSSHC*QSLQYH Trigger: ATGATACTGTAGAGACTGCCAACAGTGGGAGCTACT...GGTGGGTACCACTGTGCTGGTACTGAAAGGCGTGGGGCAGGAAAGTGAGTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR CCA 90 bp | GCACACTCACTTTCCTGCCCCACGCCTTTCAGTACCAGCACAGTGGTACCCACCCAGTGTGTCTTCTCTTaGGAGAAACATAGTTCAACC | + |
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Preference number: 2 (lower is better) Translates to: AHSLSCPTPFSTSTVVPTQCVFS*EKHSST Trigger: GGTTGAACTATGTTTCTCCCAAGAGAAGACACACTG...GGTGGGTACCACTGTGCTGGTACTGAAAGGCGTGGGGCAGGAAAGTGAGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR TCA 90 bp | GATCCAGGGAGTAGCTCCCACTGTTGGCAGTCTCTACAGTATCATAGCCTGAAAGTCCGGTATCCTCTCTaGGAACAGCCTTTGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: DPGSSSHCWQSLQYHSLKVRYPL*EQPLTE Trigger: CTCTGTCAAAGGCTGTTCTCAGAGAGGATACCGGAC...TTTCAGGCTATGATACTGTAGAGACTGCCAACAGTGGGAGCTACTCCCTGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR-3UTR TCA 90 bp | AACGACAAGAGGGCAGCAGCTAGACAAAACTGGGCTCTAGAGACATACACAGTGAACTCTGCTGCCCACTaGGATGGTAGCAGTAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: NDKRAAARQNWALETYTVNSAAH*DGSSSL Trigger: CAAGCTACTGCTACCATCTCAGTGGGCAGCAGAGTT...CACTGTGTATGTCTCTAGAGCCCAGTTTTGTCTAGCTGCTGCCCTCTTGTCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR CCA 90 bp | GTAAACGACAAGAGGGCAGCAGCTAGACAAAACTGGGCTCTAGAGACATACACAAGGCCTCACTGTGCCTaGAACAGTTTCTGTAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: VNDKRAAARQNWALETYTRPHCA*NSFCSS Trigger: GGAGCTACAGAAACTGTTCCAGGCACAGTGAGGCCT...TGTGTATGTCTCTAGAGCCCAGTTTTGTCTAGCTGCTGCCCTCTTGTCGTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGAACAAACACCTCCTTCCAAATATTCTTGGGGTCAGAAGCCAAGGAAAAGACAGAGCTCCTGAGTaGTGCAGGCCTCACTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: GKNKHLLPNILGVRSQGKDRAPE*CRPHCA Trigger: GGCACAGTGAGGCCTGCACCACTCAGGAGCTCTGTC...TTTTCCTTGGCTTCTGACCCCAAGAATATTTGGAAGGAGGTGTTTGTTCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR CCA 90 bp | GCACACTCACTTTCCTGCCCCACGCCTTTCAGTACCAGCACAGTGGTACCCACCTTAAAACAGATTGTTTaGGGCATGGGTGAAAACACT | + |
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Preference number: 2 (lower is better) Translates to: AHSLSCPTPFSTSTVVPTLKQIV*GMGENT Trigger: AGTGTTTTCACCCATGCCCCAAACAATCTGTTTTAA...GGTGGGTACCACTGTGCTGGTACTGAAAGGCGTGGGGCAGGAAAGTGAGTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR CAA 90 bp | AAACTCTGTATGTGCTCCTCTTCCCATTACCTGCAGAAACCAGTTTaGTCTGCAAGCTCACCATGGCCTCTGCTAGTAGGTGTAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: KLCMCSSSHYLQKPV*SASSPWPLLVGVGS Trigger: GCTTCCTACACCTACTAGCAGAGGCCATGGTGAGCTTGCAGACAAAACTGGTTTCTGCAGGTAATGGGAAGAGGAGCACATACAGAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR GCA 90 bp | TTTAGTCACGTTCAGCAAATAAGTAGTAAAGGACAGTGCCAGATGACAAATGTCAGAGCTCCTGAGTGGTaGAGGCCTCACTGTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: FSHVQQISSKGQCQMTNVRAPEW*RPHCAW Trigger: CCAGGCACAGTGAGGCCTGCACCACTCAGGAGCTCT...GACATTTGTCATCTGGCACTGTCCTTTACTACTTATTTGCTGAACGTGACTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR GCA 90 bp | CTTCAAACAGCACACTCTCCCTGGTGCATTCAAATATCAAACATGATGTTTACAAGAGCTCCTGAGTGGTaGAGGCCTCACTGTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LQTAHSPWCIQISNMMFTRAPEW*RPHCAW Trigger: CCAGGCACAGTGAGGCCTGCACCACTCAGGAGCTCT...TGTAAACATCATGTTTGATATTTGAATGCACCAGGGAGAGTGTGCTGTTTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR-3UTR CCA 90 bp | TTTACCGGAGCCTTCAAACAGCACACTCTCCCTGGTGCATTCAAATATCAAACAGGTCCCCATGAGAGCTaGGACAGCAGGGTAAATTCT | + |
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Preference number: 2 (lower is better) Translates to: FTGAFKQHTLPGAFKYQTGPHES*DSRVNS Trigger: AGAATTTACCCTGCTGTCCCAGCTCTCATGGGGACC...TGTTTGATATTTGAATGCACCAGGGAGAGTGTGCTGTTTGAAGGCTCCGGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAACAAAATCTGGAAGGTTTCTTACTCTGGTTATAGGGAGAAGTGGGAGGTGTGCAAACTGTTCCTaGGGGATCATTCATGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: KPTKSGRFLTLVIGRSGRCANCS*GIIHVC Trigger: GCACACATGAATGATCCCTCAGGAACAGTTTGCACA...CCTCCCACTTCTCCCTATAACCAGAGTAAGAAACCTTCCAGATTTTGTTGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGCATTCAAATATCAAACATGATGTTTACAAGATACAGAGTGGAGCTGACGAGGCTGATATCGGGTaGGGCAGTAGCAGAATGGAA | + |
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Preference number: 2 (lower is better) Translates to: LVHSNIKHDVYKIQSGADEADIG*GSSRME Trigger: TTCCATTCTGCTACTGCCTCACCCGATATCAGCCTC...GTCAGCTCCACTCTGTATCTTGTAAACATCATGTTTGATATTTGAATGCACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR-3UTR CCA 90 bp | ATAGCTTTACCGGAGCCTTCAAACAGCACACTCTCCCTGGTGCATTCAAATATCGTGAGATTGATGACATaGTCACATAGCTGCAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: IALPEPSNSTLSLVHSNIVRLMT*SHSCKV Trigger: CACTTTGCAGCTATGTGACCATGTCATCAATCTCAC...GATATTTGAATGCACCAGGGAGAGTGTGCTGTTTGAAGGCTCCGGTAAAGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR-3UTR TCA 90 bp | CAATTCCCCTACATACTAACCATAGAAATAATTACTGTGAGAGAGGGGAAGCAGTACAGTATCATAGCCTaGAAACAGGGCTCCACTCCA | + |
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Preference number: 2 (lower is better) Translates to: QFPYILTIEIITVREGKQYSIIA*KQGSTP Trigger: TGGAGTGGAGCCCTGTTTTCAGGCTATGATACTGTA...CTGCTTCCCCTCTCTCACAGTAATTATTTCTATGGTTAGTATGTAGGGGAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAACAAAATCTGGAAGGTTTCTTACTCTGGTTATAGGGAGAAGTGGGAGGACGCACCCATTAAAATaGGATGGGCCAAGAACTATT | + |
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Preference number: 2 (lower is better) Translates to: KPTKSGRFLTLVIGRSGRTHPLK*DGPRTI Trigger: AATAGTTCTTGGCCCATCTCATTTTAATGGGTGCGT...CCTCCCACTTCTCCCTATAACCAGAGTAAGAAACCTTCCAGATTTTGTTGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR TCA 90 bp | TTTAGTCACGTTCAGCAAATAAGTAGTAAAGGACAGTGCCAGATGACAAATGTCACAGCATCACCACCTTaGGGAGAACACCCAGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: FSHVQQISSKGQCQMTNVTASPP*GEHPVL Trigger: TAAGACTGGGTGTTCTCCTCAAGGTGGTGATGCTGT...GACATTTGTCATCTGGCACTGTCCTTTACTACTTATTTGCTGAACGTGACTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR GCA 90 bp | TTTAGTCACGTTCAGCAAATAAGTAGTAAAGGACAGTGCCAGATGACAAATGTCCACATAGCTGCAAAGTaGACAAAGCTCAAGGCACAC | + |
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Preference number: 2 (lower is better) Translates to: FSHVQQISSKGQCQMTNVHIAAK*TKLKAH Trigger: GTGTGCCTTGAGCTTTGTGCACTTTGCAGCTATGTG...GACATTTGTCATCTGGCACTGTCCTTTACTACTTATTTGCTGAACGTGACTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR GCA 90 bp | CTGGTGCATTCAAATATCAAACATGATGTTTACAAGATACAGAGTGGAGCTGACCACATAGCTGCAAAGTaGACAAAGCTCAAGGCACAC | + |
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Preference number: 2 (lower is better) Translates to: LVHSNIKHDVYKIQSGADHIAAK*TKLKAH Trigger: GTGTGCCTTGAGCTTTGTGCACTTTGCAGCTATGTG...GTCAGCTCCACTCTGTATCTTGTAAACATCATGTTTGATATTTGAATGCACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCCCTGGAACATTGTTTACAAACACAGGACTGCTACTGGGTAATGTTCTTGTGAGATTGATGACATaGTCACATAGCTGCAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: SSPGTLFTNTGLLLGNVLVRLMT*SHSCKV Trigger: CACTTTGCAGCTATGTGACCATGTCATCAATCTCAC...AAGAACATTACCCAGTAGCAGTCCTGTGTTTGTAAACAATGTTCCAGGGGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR CAA 90 bp | AAGATTCTTTCGTTCTTGTATTTCTGGAGGAAGCTGATTCAAACATaGAGCTTCACTTTATCAACGGCCACTCTCCAAGACACTTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: KILSFLYFWRKLIQT*SFTLSTATLQDTCS Trigger: AGAGCAAGTGTCTTGGAGAGTGGCCGTTGATAAAGTGAAGCTCAATGTTTGAATCAGCTTCCTCCAGAAATACAAGAACGAAAGAATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR CAA 90 bp | GAAAGATTCAAGCTATCAGCTTTTAACTGTTCTTCCCCTGGAACATaGTTTACAAACACAGGACTGCTACTGGGTAATGTTCTTGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: ERFKLSAFNCSSPGT*FTNTGLLLGNVLVP Trigger: AGGGACAAGAACATTACCCAGTAGCAGTCCTGTGTTTGTAAACAATGTTCCAGGGGAAGAACAGTTAAAAGCTGATAGCTTGAATCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR-3UTR GCA 90 bp | CTTCAAACAGCACACTCTCCCTGGTGCATTCAAATATCAAACATGATGTTTACACTGACCAGCCTCAAGTaGTTCCATTTTCTCAATCAG | + |
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Preference number: 2 (lower is better) Translates to: LQTAHSPWCIQISNMMFTLTSLK*FHFLNQ Trigger: CTGATTGAGAAAATGGAAGCACTTGAGGCTGGTCAG...TGTAAACATCATGTTTGATATTTGAATGCACCAGGGAGAGTGTGCTGTTTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCAAACAGCACACTCTCCCTGGTGCATTCAAATATCAAACATGATGTTTACAAGTAGCTCCCACTGTTaGCAGTCTCTACAGTATCAT | + |
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Preference number: 2 (lower is better) Translates to: LQTAHSPWCIQISNMMFTSSSHC*QSLQYH Trigger: ATGATACTGTAGAGACTGCCAACAGTGGGAGCTACT...TGTAAACATCATGTTTGATATTTGAATGCACCAGGGAGAGTGTGCTGTTTGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR-3UTR TCA 90 bp | TTTAGTCACGTTCAGCAAATAAGTAGTAAAGGACAGTGCCAGATGACAAATGTCGGTCAACTTTTAAAATaGGCATTGTCTCTCAACACC | + |
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Preference number: 2 (lower is better) Translates to: FSHVQQISSKGQCQMTNVGQLLK*ALSLNT Trigger: GGTGTTGAGAGACAATGCTCATTTTAAAAGTTGACC...GACATTTGTCATCTGGCACTGTCCTTTACTACTTATTTGCTGAACGTGACTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR GCA 90 bp | CAATTCCCCTACATACTAACCATAGAAATAATTACTGTGAGAGAGGGGAAGCAGATAAATTCTACCAACTaGAGACAAGTACCTGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: QFPYILTIEIITVREGKQINSTN*RQVPER Trigger: TCTTTCAGGTACTTGTCTGCAGTTGGTAGAATTTAT...CTGCTTCCCCTCTCTCACAGTAATTATTTCTATGGTTAGTATGTAGGGGAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGCATTCAAATATCAAACATGATGTTTACAAGATACAGAGTGGAGCTGACAGATTGTTTGGGGCATaGGTGAAAACACTGTATTAT | + |
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Preference number: 2 (lower is better) Translates to: LVHSNIKHDVYKIQSGADRLFGA*VKTLYY Trigger: ATAATACAGTGTTTTCACCCATGCCCCAAACAATCT...GTCAGCTCCACTCTGTATCTTGTAAACATCATGTTTGATATTTGAATGCACCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCAAACAGCACACTCTCCCTGGTGCATTCAAATATCAAACATGATGTTTACATTAAAACAGATTGTTTaGGGCATGGGTGAAAACACT | + |
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Preference number: 2 (lower is better) Translates to: LQTAHSPWCIQISNMMFTLKQIV*GMGENT Trigger: AGTGTTTTCACCCATGCCCCAAACAATCTGTTTTAA...TGTAAACATCATGTTTGATATTTGAATGCACCAGGGAGAGTGTGCTGTTTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR GCA 72 bp | ACCAGGACGAATCCATCAGCAGCACACTCACTTTCCTaGCCCACGCCTTTCAGTACCAGCACAGTGGTACCC | + |
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Preference number: 3 (lower is better) Translates to: TRTNPSAAHSLS*PTPFSTSTVVP Trigger: GGGTACCACTGTGCTGGTACTGAAAGGCGTGGGGCAGGAAAGTGAGTGTGCTGCTGATGGATTCGTCCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR CCA 72 bp | CACTTTCCTGCCCCACGCCTTTCAGTACCAGCACAGTaGTACCCACCCAGCTCTGACTCAGAGAACAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: HFPAPRLSVPAQ*YPPSSDSENKN Trigger: GTTCTTGTTCTCTGAGTCAGAGCTGGGTGGGTACCACTGTGCTGGTACTGAAAGGCGTGGGGCAGGAAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR TCA 72 bp | TTTAAGGTCTTCAATAGTGCAGGAGGGATGAGGCAGTaGCTGCAGCTAAGCAGCAGGGGACCAGAGAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: FKVFNSAGGMRQ*LQLSSRGPERE Trigger: CTCCCTCTCTGGTCCCCTGCTGCTTAGCTGCAGTCACTGCCTCATCCCTCCTGCACTATTGAAGACCTTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR GCA 72 bp | TCTCTGAGAACAGCCTTTGACAGAGCTCCTGAGTGGTaGAGGCCTCACTGTGCCTGGAACAGTTTCTGTAGC | + |
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Preference number: 3 (lower is better) Translates to: SLRTAFDRAPEW*RPHCAWNSFCS Trigger: GCTACAGAAACTGTTCCAGGCACAGTGAGGCCTGCACCACTCAGGAGCTCTGTCAAAGGCTGTTCTCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR TCA 72 bp | CCTTTCAGTACCAGCACAGTGGTACCCACCCAGCTCTaGCTCAGAGAACAAGAACTTCACAGGTTTTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: PFSTSTVVPTQL*LREQELHRFSL Trigger: CAGGGAAAACCTGTGAAGTTCTTGTTCTCTGAGTCAGAGCTGGGTGGGTACCACTGTGCTGGTACTGAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| 3UTR GCA 72 bp | CTCCTCTTCCCATTACCTGCAGAAACCAGTTTTGTCTaGAAGCTCACCATGGCCTCTGCTAGTAGGTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLFPLPAETSFV*KLTMASASRCR Trigger: CCTACACCTACTAGCAGAGGCCATGGTGAGCTTGCAGACAAAACTGGTTTCTGCAGGTAATGGGAAGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR GCA 72 bp | AAGCCTAAAAGATCTTCAAGGCAGAGAGATTGGTCCTaGACGAAGGGGGCAGACCCATCACTGACTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KPKRSSRQRDWS*TKGADPSLTLE Trigger: TTCCAGAGTCAGTGATGGGTCTGCCCCCTTCGTGCAGGACCAATCTCTCTGCCTTGAAGATCTTTTAGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR CCA 72 bp | TACCTGCAGAAACCAGTTTTGTCTGCAAGCTCACCATaGCCTCTGCTAGTAGGTGTAGGAAGCCTCTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: YLQKPVLSASSP*PLLVGVGSLLC Trigger: GCACAAGAGGCTTCCTACACCTACTAGCAGAGGCCATGGTGAGCTTGCAGACAAAACTGGTTTCTGCAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAGAGGGATCCAGGGAGTAGCTCCCACTGTTGGCAGTCTCTACAGTATCATAAGATTCTTTCGTTCTaGTATTTCTGGAGGAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PKRDPGSSSHCWQSLQYHKILSF*YFWRKL Trigger: CAGCTTCCTCCAGAAATACAAGAACGAAAGAATCTT...ATGATACTGTAGAGACTGCCAACAGTGGGAGCTACTCCCTGGATCCCTCTTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| 3UTR GCA 72 bp | CCAGCCTCAAGTGCTTCCATTTTCTCAATCAGGTTCTaGTACAAACACAAAGCCATACCAGAGGCTTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PASSASIFSIRF*YKHKAIPEALV Trigger: CACCAAAGCCTCTGGTATGGCTTTGTGTTTGTAGCAGAACCTGATTGAGAAAATGGAAGCACTTGAGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| 3UTR GCA 72 bp | CTGGCCCCCAAGAAAATAATTCCTGCCAGGTCAGAATaGAGTTATGACAGCAGGTCAGTAGATAACATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LAPKKIIPARSE*SYDSRSVDNMV Trigger: CACCATGTTATCTACTGACCTGCTGTCATAACTGCATTCTGACCTGGCAGGAATTATTTTCTTGGGGGCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR CCA 72 bp | CTAAGCAGCAGGGGACCAGAGAGGGAGCATTTCCTTTaGGAAAGAACAAACACCTCCTTCCAAATATTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSSRGPEREHFL*ERTNTSFQIFL Trigger: CAAGAATATTTGGAAGGAGGTGTTTGTTCTTTCCCAAAGGAAATGCTCCCTCTCTGGTCCCCTGCTGCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR TCA 72 bp | ACTGAAAAATCAAAGAAAGAAGTCCGGTATCCTCTCTaGGAACAGCCTTTGACAGAGCTCCTGAGTGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TEKSKKEVRYPL*EQPLTELLSGA Trigger: TGCACCACTCAGGAGCTCTGTCAAAGGCTGTTCTCAGAGAGGATACCGGACTTCTTTCTTTGATTTTTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| 3UTR TCA 72 bp | TTACAAGTCACTCAACTCTTAACCCAAGAGCCATGCTaGCAACCTTCCAAGAGGTGTAATCCAGCAGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: LQVTQLLTQEPC*QPSKRCNPADQ Trigger: TTGGTCTGCTGGATTACACCTCTTGGAAGGTTGTCAGCATGGCTCTTGGGTTAAGAGTTGAGTGACTTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR CCA 72 bp | TCAACTTCTTCAGGAAGCATCGTGAGATTGATGACATaGTCACATAGCTGCAAAGTGCACAAAGCTCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: STSSGSIVRLMT*SHSCKVHKAQG Trigger: GCCTTGAGCTTTGTGCACTTTGCAGCTATGTGACCATGTCATCAATCTCACGATGCTTCCTGAAGAAGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| 3UTR CCA 72 bp | AAAGTAAACGACAAGAGGGCAGCAGCTAGACAAAACTaGGCTCTAGAGACATACACAGTGTCATGTCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: KVNDKRAAARQN*ALETYTVSCHD Trigger: GTCATGACATGACACTGTGTATGTCTCTAGAGCCCAGTTTTGTCTAGCTGCTGCCCTCTTGTCGTTTACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR-3UTR CAA 90 bp | AACGACAAGAGGGCAGCAGCTAGACAAAACTGGGCTCTAGAGACATACACAGTGATAGAAAAACTGTACTaGCAAGACCACAAGTACACA | + |
|
Preference number: 3 (lower is better) Translates to: NDKRAAARQNWALETYTVIEKLY*QDHKYT Trigger: TGTGTACTTGTGGTCTTGCAAGTACAGTTTTTCTAT...CACTGTGTATGTCTCTAGAGCCCAGTTTTGTCTAGCTGCTGCCCTCTTGTCGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR GCA 72 bp | GTTCTTCCCCTGGAACATTGTTTACAAACACAGGACTaGTACTGGGTAATGTTCTTGTCCCTGGTATTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VLPLEHCLQTQD*YWVMFLSLVFH Trigger: ATGGAATACCAGGGACAAGAACATTACCCAGTAGCAGTCCTGTGTTTGTAAACAATGTTCCAGGGGAAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| 3UTR GCA 72 bp | AAACTGTTCCTGAGGGATCATTCATGTGTGCAAATTTaGAACCTGACAGAAAGTAAACGACAAGAGGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KLFLRDHSCVQI*NLTESKRQEGS Trigger: GCTGCCCTCTTGTCGTTTACTTTCTGTCAGGTTGCAAATTTGCACACATGAATGATCCCTCAGGAACAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR CCA 72 bp | GAAGTTTTACAAACTGTAAAGCCTTGCTTAACTTACTaGTTACCAGGACGAATCCATCAGCAGCACACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: EVLQTVKPCLTY*LPGRIHQQHTH Trigger: GTGAGTGTGCTGCTGATGGATTCGTCCTGGTAACCAGTAAGTTAAGCAAGGCTTTACAGTTTGTAAAACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR-3UTR CAA 90 bp | GTGCAAACTGTTCCTGAGGGATCATTCATGTGTGCAAATTTGCAACCTGACAGAAAGATTCTTTCGTTCTaGTATTTCTGGAGGAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VQTVPEGSFMCANLQPDRKILSF*YFWRKL Trigger: CAGCTTCCTCCAGAAATACAAGAACGAAAGAATCTT...TCTGTCAGGTTGCAAATTTGCACACATGAATGATCCCTCAGGAACAGTTTGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGTCACGTTCAGCAAATAAGTAGTAAAGGACAGTGCCAGATGACAAATGTCGAGGGAGCATTTCCTTaGGGAAAGAACAAACACCTC | + |
|
Preference number: 3 (lower is better) Translates to: FSHVQQISSKGQCQMTNVEGAFP*GKNKHL Trigger: GAGGTGTTTGTTCTTTCCCAAAGGAAATGCTCCCTC...GACATTTGTCATCTGGCACTGTCCTTTACTACTTATTTGCTGAACGTGACTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR TCA 72 bp | TTTAATGCTGTTTGGTCTATACAGAGTATACTGAGGTaGGGAGTGTGCAAACTGTTCCTGAGGGATCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: FNAVWSIQSILR*GVCKLFLRDHS Trigger: TGAATGATCCCTCAGGAACAGTTTGCACACTCCTCACCTCAGTATACTCTGTATAGACCAAACAGCATTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAGAACAAACACCTCCTTCCAAATATTCTTGGGGTCAGAAGCCAAGGAAAATGTCACATTCCAACCTaGAATTTTAACATCCCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: GKNKHLLPNILGVRSQGKCHIPT*NFNIPL Trigger: TAGGGGGATGTTAAAATTCAAGGTTGGAATGTGACA...TTTTCCTTGGCTTCTGACCCCAAGAATATTTGGAAGGAGGTGTTTGTTCTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR TCA 72 bp | GACATTAGAGCAGAAAAGGCTGTACAGACCATAGTATaGGTCCACTTGTCCCTACTCAGATTCTTCAATATA | + |
|
Preference number: 3 (lower is better) Translates to: DIRAEKAVQTIV*VHLSLLRFFNI Trigger: TATATTGAAGAATCTGAGTAGGGACAAGTGGACTCATACTATGGTCTGTACAGCCTTTTCTGCTCTAATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| 3UTR GCA 72 bp | AGCTTCACTTTATCAACGGCCACTCTCCAAGACACTTaGTCTGTAGATAAAAGATTGTCCCATTTCATAATC | + |
|
Preference number: 3 (lower is better) Translates to: SFTLSTATLQDT*SVDKRLSHFII Trigger: GATTATGAAATGGGACAATCTTTTATCTACAGAGCAAGTGTCTTGGAGAGTGGCCGTTGATAAAGTGAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| 3UTR GCA 72 bp | TCCATTTCAGCTGAAGTTTTACAAACTGTAAAGCCTTaGTTAACTTACTGGTTACCAGGACGAATCCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: SISAEVLQTVKP*LTYWLPGRIHQ Trigger: CTGATGGATTCGTCCTGGTAACCAGTAAGTTAAGCAAGGCTTTACAGTTTGTAAAACTTCAGCTGAAATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR GCA 72 bp | CAATCATTACTAATTGCGCATGTAAGTGAACAACCCTaGCTAGGAACTATTAGGCAAGTCAGACCACTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QSLLIAHVSEQP*LGTIRQVRPLN Trigger: ATTTAGTGGTCTGACTTGCCTAATAGTTCCTAGGCAGGGTTGTTCACTTACATGCGCAATTAGTAATGATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR TCA 72 bp | CCCTTTAGCCAAATCAACTGTATTTCAGTGACTAACTaGGCTACACAAAATTTGAGCTTTAAGGATCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: PFSQINCISVTN*ATQNLSFKDLI Trigger: AATCAGATCCTTAAAGCTCAAATTTTGTGTAGCTCAGTTAGTCACTGAAATACAGTTGATTTGGCTAAAGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR CCA 90 bp | GAGTGGTGCAGGCCTCACTGTGCCTGGAACAGTTTCTGTAGCTCCAGTGTGTCTGACCCTTCCTCTCCATaGAGCCCGCGTGCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EWCRPHCAWNSFCSSSVSDPSSP*SPRAQP Trigger: TGGCTGTGCACGCGGGCTCCATGGAGAGGAAGGGTC...AGACACACTGGAGCTACAGAAACTGTTCCAGGCACAGTGAGGCCTGCACCACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR CCA 90 bp | CCCCATGAGAGCTGGGACAGCAGGGTAAATTCTGACCAGCCTCAAGTGCTTCCACATGATCACCCCGTTTaGTTCCGGCAAGGGCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHESWDSRVNSDQPQVLPHDHPV*FRQGRR Trigger: CCTCCGCCCTTGCCGGAACCAAACGGGGTGATCATG...TGGAAGCACTTGAGGCTGGTCAGAATTTACCCTGCTGTCCCAGCTCTCATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR CCA 90 bp | GAGTGGTGCAGGCCTCACTGTGCCTGGAACAGTTTCTGTAGCTCCAGTGTGTCTTGGCCTGCAGCTCCTTaGAGACTCGCTCTAAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EWCRPHCAWNSFCSSSVSWPAAP*RLALSG Trigger: GCCACTTAGAGCGAGTCTCCAAGGAGCTGCAGGCCA...AGACACACTGGAGCTACAGAAACTGTTCCAGGCACAGTGAGGCCTGCACCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR TCA 90 bp | GAGTGGTGCAGGCCTCACTGTGCCTGGAACAGTTTCTGTAGCTCCAGTGTGTCTGCTCTCTTCCGGGACTaGTCACCTGCATTAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EWCRPHCAWNSFCSSSVSALFRD*SPALGC Trigger: ACAGCCTAATGCAGGTGATCAGTCCCGGAAGAGAGC...AGACACACTGGAGCTACAGAAACTGTTCCAGGCACAGTGAGGCCTGCACCACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111460.5 |
||
| CDS-3UTR CCA 90 bp | GTAAACGACAAGAGGGCAGCAGCTAGACAAAACTGGGCTCTAGAGACATACACAGACCCTTCCTCTCCATaGAGCCCGCGTGCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VNDKRAAARQNWALETYTDPSSP*SPRAQP Trigger: TGGCTGTGCACGCGGGCTCCATGGAGAGGAAGGGTC...TGTGTATGTCTCTAGAGCCCAGTTTTGTCTAGCTGCTGCCCTCTTGTCGTTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR TCA 90 bp | GAGTGGTGCAGGCCTCACTGTGCCTGGAACAGTTTCTGTAGCTCCAGTGTGTCTGCCTCCCAGTTGTTGTaGTTCTGGTCGTCCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: EWCRPHCAWNSFCSSSVSASQLL*FWSSII Trigger: AATGATGGACGACCAGAATCACAACAACTGGGAGGC...AGACACACTGGAGCTACAGAAACTGTTCCAGGCACAGTGAGGCCTGCACCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR GCA 90 bp | CCCCATGAGAGCTGGGACAGCAGGGTAAATTCTGACCAGCCTCAAGTGCTTCCACACGATGCTCTGCAATaGTCCCATATACTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHESWDSRVNSDQPQVLPHDALQ*SHILSQ Trigger: CTGGGACAGTATATGGGAGCATTGCAGAGCATCGTG...TGGAAGCACTTGAGGCTGGTCAGAATTTACCCTGCTGTCCCAGCTCTCATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR CCA 90 bp | GTAAACGACAAGAGGGCAGCAGCTAGACAAAACTGGGCTCTAGAGACATACACACATGATCACCCCGTTTaGTTCCGGCAAGGGCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNDKRAAARQNWALETYTHDHPV*FRQGRR Trigger: CCTCCGCCCTTGCCGGAACCAAACGGGGTGATCATG...TGTGTATGTCTCTAGAGCCCAGTTTTGTCTAGCTGCTGCCCTCTTGTCGTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR GCA 90 bp | CCCCATGAGAGCTGGGACAGCAGGGTAAATTCTGACCAGCCTCAAGTGCTTCCAAGAGGCACGATGCTCTaGAATGCTCCCATATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHESWDSRVNSDQPQVLPRGTML*NAPIYC Trigger: ACAGTATATGGGAGCATTGCAGAGCATCGTGCCTCT...TGGAAGCACTTGAGGCTGGTCAGAATTTACCCTGCTGTCCCAGCTCTCATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR GCA 90 bp | GCAGGCCTCACTGTGCCTGGAACAGTTTCTGTAGCTCCAGTGTGTCTTCTCTTGAGAGGCACGATGCTCTaGAATGCTCCCATATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGLTVPGTVSVAPVCLLLRGTML*NAPIYC Trigger: ACAGTATATGGGAGCATTGCAGAGCATCGTGCCTCT...CAAGAGAAGACACACTGGAGCTACAGAAACTGTTCCAGGCACAGTGAGGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR CCA 90 bp | CCCCATGAGAGCTGGGACAGCAGGGTAAATTCTGACCAGCCTCAAGTGCTTCCAACTATCTATACCCCCTaGAACTTGCACAAGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PHESWDSRVNSDQPQVLPTIYTP*NLHKQM Trigger: CATCTGCTTGTGCAAGTTCCAGGGGGTATAGATAGT...TGGAAGCACTTGAGGCTGGTCAGAATTTACCCTGCTGTCCCAGCTCTCATGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111460.5 |
||
| 3UTR CAA 72 bp | CATATGTTTATAAGGAGAGAGCCCAGGCCAGCAGCTTaGTACCCCAGCTCAGGAAGCGCTTTAGTCACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HMFIRREPRPAA*YPSSGSALVTF Trigger: GAACGTGACTAAAGCGCTTCCTGAGCTGGGGTACAAAGCTGCTGGCCTGGGCTCTCTCCTTATAAACATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR TCA 90 bp | GATCCAGGGAGTAGCTCCCACTGTTGGCAGTCTCTACAGTATCATAGCCTGAAAACTGTACATCTGTTCTaGGTGCTGCTGGCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: DPGSSSHCWQSLQYHSLKTVHLF*VLLAHT Trigger: TGTGTGTGCCAGCAGCACTCAGAACAGATGTACAGT...TTTCAGGCTATGATACTGTAGAGACTGCCAACAGTGGGAGCTACTCCCTGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR TCA 90 bp | AACGACAAGAGGGCAGCAGCTAGACAAAACTGGGCTCTAGAGACATACACAGTGGAACCCATTCTGGTCTaGGAGTGTACAGGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NDKRAAARQNWALETYTVEPILV*ECTGLS Trigger: TGAAAGGCCTGTACACTCTCAGACCAGAATGGGTTC...CACTGTGTATGTCTCTAGAGCCCAGTTTTGTCTAGCTGCTGCCCTCTTGTCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR GCA 90 bp | AATGCACAATCATTACTAATTGCGCATGTAAGTGAACAACCCTGCCTAGGAACTTCTGGAGGGCTGGCCTaGAGCTCCTTGGAGACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NAQSLLIAHVSEQPCLGTSGGLA*SSLETR Trigger: GCGAGTCTCCAAGGAGCTGCAGGCCAGCCCTCCAGA...AGTTCCTAGGCAGGGTTGTTCACTTACATGCGCAATTAGTAATGATTGTGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR CCA 90 bp | AGCATCGTGAGATTGATGACATGGTCACATAGCTGCAAAGTGCACAAAGCTCAATGGCCTGCAGCTCCTTaGAGACTCGCTCTAAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SIVRLMTWSHSCKVHKAQWPAAP*RLALSG Trigger: GCCACTTAGAGCGAGTCTCCAAGGAGCTGCAGGCCA...TTGAGCTTTGTGCACTTTGCAGCTATGTGACCATGTCATCAATCTCACGATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCCTGGAACATTGTTTACAAACACAGGACTGCTACTGGGTAATGTTCTTAGAGGTCTGGAGGGCTaGCCTGCAGCTCCTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSPGTLFTNTGLLLGNVLRGLEG*PAAPWR Trigger: TCTCCAAGGAGCTGCAGGCCAGCCCTCCAGACCTCT...AAGAACATTACCCAGTAGCAGTCCTGTGTTTGTAAACAATGTTCCAGGGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| 3UTR CAA 72 bp | ATGTGCTCCTCTTCCCATTACCTGCAGAAACCAGTTTaGTCTGCAAGCTCACCATGGCCTCTGCTAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MCSSSHYLQKPV*SASSPWPLLVG Trigger: ACCTACTAGCAGAGGCCATGGTGAGCTTGCAGACAAAACTGGTTTCTGCAGGTAATGGGAAGAGGAGCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR GCA 90 bp | GATCCAGGGAGTAGCTCCCACTGTTGGCAGTCTCTACAGTATCATAGCCTGAAAATACCCCCTGGAACTTaGACAAGCAGATGGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DPGSSSHCWQSLQYHSLKIPPGT*TSRWTV Trigger: AACAGTCCATCTGCTTGTGCAAGTTCCAGGGGGTAT...TTTCAGGCTATGATACTGTAGAGACTGCCAACAGTGGGAGCTACTCCCTGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR TCA 90 bp | ATAGCTTTACCGGAGCCTTCAAACAGCACACTCTCCCTGGTGCATTCAAATATCAGCTCTTCAACATCATaGTCACCCCGTTTGGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IALPEPSNSTLSLVHSNISSSTS*SPRLVP Trigger: CGGAACCAAACGGGGTGATCATGATGTTGAAGAGCT...GATATTTGAATGCACCAGGGAGAGTGTGCTGTTTGAAGGCTCCGGTAAAGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR TCA 90 bp | ATAGCTTTACCGGAGCCTTCAAACAGCACACTCTCCCTGGTGCATTCAAATATCACTGTACATCTGTTCTaGGTGCTGCTGGCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: IALPEPSNSTLSLVHSNITVHLF*VLLAHT Trigger: TGTGTGTGCCAGCAGCACTCAGAACAGATGTACAGT...GATATTTGAATGCACCAGGGAGAGTGTGCTGTTTGAAGGCTCCGGTAAAGCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCCTGGAACATTGTTTACAAACACAGGACTGCTACTGGGTAATGTTCTTGCTCTCTTCCGGGACTaGTCACCTCTGGTAAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: SSPGTLFTNTGLLLGNVLALFRD*SPLVKP Trigger: CGGTTTTACCAGAGGTGATCAGTCCCGGAAGAGAGC...AAGAACATTACCCAGTAGCAGTCCTGTGTTTGTAAACAATGTTCCAGGGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR GCA 90 bp | GATCCAGGGAGTAGCTCCCACTGTTGGCAGTCTCTACAGTATCATAGCCTGAAAATCTGTTCTGAGTGCTaGTGGCACACACACTTATAC | + |
|
Preference number: 4 (lower is better) Translates to: DPGSSSHCWQSLQYHSLKICSEC*WHTHLY Trigger: GTATAAGTGTGTGTGCCAGCAGCACTCAGAACAGAT...TTTCAGGCTATGATACTGTAGAGACTGCCAACAGTGGGAGCTACTCCCTGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR GCA 90 bp | ATCGTGAGATTGATGACATGGTCACATAGCTGCAAAGTGCACAAAGCTCAAGGCCACGATGCTCTGCAATaGTCCCATATACTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IVRLMTWSHSCKVHKAQGHDALQ*SHILSQ Trigger: CTGGGACAGTATATGGGAGCATTGCAGAGCATCGTG...GCCTTGAGCTTTGTGCACTTTGCAGCTATGTGACCATGTCATCAATCTCACGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| 3UTR CAA 72 bp | GCTAAGCAGCAGGGGACCAGAGAGGGAGCATTTCCTTaGGGAAAGAACAAACACCTCCTTCCAAATATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AKQQGTREGAFP*GKNKHLLPNIL Trigger: AAGAATATTTGGAAGGAGGTGTTTGTTCTTTCCCAAAGGAAATGCTCCCTCTCTGGTCCCCTGCTGCTTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR GCA 90 bp | ATCGTGAGATTGATGACATGGTCACATAGCTGCAAAGTGCACAAAGCTCAAGGCTACATCTGTTCTGAGTaGTGCTGGCACACACACTTA | + |
|
Preference number: 4 (lower is better) Translates to: IVRLMTWSHSCKVHKAQGYICSE*CWHTHL Trigger: TAAGTGTGTGTGCCAGCAGCACTCAGAACAGATGTA...GCCTTGAGCTTTGTGCACTTTGCAGCTATGTGACCATGTCATCAATCTCACGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR TCA 90 bp | CAATTCCCCTACATACTAACCATAGAAATAATTACTGTGAGAGAGGGGAAGCAGGCCTCCCAGTTGTTGTaGTTCTGGTCGTCCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: QFPYILTIEIITVREGKQASQLL*FWSSII Trigger: AATGATGGACGACCAGAATCACAACAACTGGGAGGC...CTGCTTCCCCTCTCTCACAGTAATTATTTCTATGGTTAGTATGTAGGGGAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR TCA 90 bp | GTAAACGACAAGAGGGCAGCAGCTAGACAAAACTGGGCTCTAGAGACATACACACTCTGGGTTAAAAGTTaGTCTATGGCACCATCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: VNDKRAAARQNWALETYTLWVKS*SMAPSN Trigger: ATTAGATGGTGCCATAGATCAACTTTTAACCCAGAG...TGTGTATGTCTCTAGAGCCCAGTTTTGTCTAGCTGCTGCCCTCTTGTCGTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR GCA 90 bp | GTGCAAACTGTTCCTGAGGGATCATTCATGTGTGCAAATTTGCAACCTGACAGAATCTGTTCTGAGTGCTaGTGGCACACACACTTATAC | + |
|
Preference number: 4 (lower is better) Translates to: VQTVPEGSFMCANLQPDRICSEC*WHTHLY Trigger: GTATAAGTGTGTGTGCCAGCAGCACTCAGAACAGAT...TCTGTCAGGTTGCAAATTTGCACACATGAATGATCCCTCAGGAACAGTTTGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR GCA 90 bp | TTTACCGGAGCCTTCAAACAGCACACTCTCCCTGGTGCATTCAAATATCAAACATACATCTGTTCTGAGTaGTGCTGGCACACACACTTA | + |
|
Preference number: 4 (lower is better) Translates to: FTGAFKQHTLPGAFKYQTYICSE*CWHTHL Trigger: TAAGTGTGTGTGCCAGCAGCACTCAGAACAGATGTA...TGTTTGATATTTGAATGCACCAGGGAGAGTGTGCTGTTTGAAGGCTCCGGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR GCA 90 bp | GAACAAACACCTCCTTCCAAATATTCTTGGGGTCAGAAGCCAAGGAAAATTTCCATACCCCCTGGAACTTaGACAAGCAGATGGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EQTPPSKYSWGQKPRKISIPPGT*TSRWTV Trigger: AACAGTCCATCTGCTTGTGCAAGTTCCAGGGGGTAT...GGAAATTTTCCTTGGCTTCTGACCCCAAGAATATTTGGAAGGAGGTGTTTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR CCA 90 bp | AGCATCGTGAGATTGATGACATGGTCACATAGCTGCAAAGTGCACAAAGCTCAATGTTCTGAGTGCTGCTaGCACACACACTTATACACA | + |
|
Preference number: 4 (lower is better) Translates to: SIVRLMTWSHSCKVHKAQCSECC*HTHLYT Trigger: TGTGTATAAGTGTGTGTGCCAGCAGCACTCAGAACA...TTGAGCTTTGTGCACTTTGCAGCTATGTGACCATGTCATCAATCTCACGATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR GCA 90 bp | ATCGTGAGATTGATGACATGGTCACATAGCTGCAAAGTGCACAAAGCTCAAGGCGTAAATGTGCTTCTCTaGAACATGTTCCGTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: IVRLMTWSHSCKVHKAQGVNVLL*NMFRKQ Trigger: CTGTTTACGGAACATGTTGCAGAGAAGCACATTTAC...GCCTTGAGCTTTGTGCACTTTGCAGCTATGTGACCATGTCATCAATCTCACGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR TCA 90 bp | TTTACCGGAGCCTTCAAACAGCACACTCTCCCTGGTGCATTCAAATATCAAACACTCTGGGTTAAAAGTTaGTCTATGGCACCATCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: FTGAFKQHTLPGAFKYQTLWVKS*SMAPSN Trigger: ATTAGATGGTGCCATAGATCAACTTTTAACCCAGAG...TGTTTGATATTTGAATGCACCAGGGAGAGTGTGCTGTTTGAAGGCTCCGGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGTAGAGATTTCAGTTAACAAGAAGTGTCCATTTCAGCTGAAGTTTTACGTTGAAGGTGTGACCTaGAATGGTGTTGACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPVEISVNKKCPFQLKFYVEGVT*NGVDWA Trigger: AGCCCAGTCAACACCATTTCAGGTCACACCTTCAAC...GTAAAACTTCAGCTGAAATGGACACTTCTTGTTAACTGAAATCTCTACAGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR CCA 90 bp | ACTCCTGTAGAGATTTCAGTTAACAAGAAGTGTCCATTTCAGCTGAAGTTTTACCATCTGAACCCATTCTaGTCTGAGAGTGTACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPVEISVNKKCPFQLKFYHLNPF*SESVQA Trigger: GGCCTGTACACTCTCAGACCAGAATGGGTTCAGATG...GTAAAACTTCAGCTGAAATGGACACTTCTTGTTAACTGAAATCTCTACAGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| 3UTR CAA 72 bp | CTTTGGGAAAGAACAAACACCTCCTTCCAAATATTCTaGGGGTCAGAAGCCAAGGAAAATTTCCATGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LWERTNTSFQIF*GSEAKENFHVV Trigger: TACCACATGGAAATTTTCCTTGGCTTCTGACCCCAAGAATATTTGGAAGGAGGTGTTTGTTCTTTCCCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR CCA 90 bp | CTTCAAACAGCACACTCTCCCTGGTGCATTCAAATATCAAACATGATGTTTACATGTTCTGAGTGCTGCTaGCACACACACTTATACACA | + |
|
Preference number: 4 (lower is better) Translates to: LQTAHSPWCIQISNMMFTCSECC*HTHLYT Trigger: TGTGTATAAGTGTGTGTGCCAGCAGCACTCAGAACA...TGTAAACATCATGTTTGATATTTGAATGCACCAGGGAGAGTGTGCTGTTTGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| 3UTR CAA 72 bp | AAGCTATCAGCTTTTAACTGTTCTTCCCCTGGAACATaGTTTACAAACACAGGACTGCTACTGGGTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLSAFNCSSPGT*FTNTGLLLGNV Trigger: AACATTACCCAGTAGCAGTCCTGTGTTTGTAAACAATGTTCCAGGGGAAGAACAGTTAAAAGCTGATAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR TCA 90 bp | CTTCAAACAGCACACTCTCCCTGGTGCATTCAAATATCAAACATGATGTTTACAAATATTTGCCATAGTTaGAGGTGTGACCTGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LQTAHSPWCIQISNMMFTNICHS*RCDLKW Trigger: CCATTTCAGGTCACACCTTCAACTATGGCAAATATT...TGTAAACATCATGTTTGATATTTGAATGCACCAGGGAGAGTGTGCTGTTTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR GCA 90 bp | ACTCCTGTAGAGATTTCAGTTAACAAGAAGTGTCCATTTCAGCTGAAGTTTTACGTAAATGTGCTTCTCTaGAACATGTTCCGTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: TPVEISVNKKCPFQLKFYVNVLL*NMFRKQ Trigger: CTGTTTACGGAACATGTTGCAGAGAAGCACATTTAC...GTAAAACTTCAGCTGAAATGGACACTTCTTGTTAACTGAAATCTCTACAGGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| CDS-3UTR CCA 90 bp | CAATTCCCCTACATACTAACCATAGAAATAATTACTGTGAGAGAGGGGAAGCAGTTAAAAGTTGATCTATaGCACCATCTAATTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QFPYILTIEIITVREGKQLKVDL*HHLILA Trigger: GGCCAAAATTAGATGGTGCCATAGATCAACTTTTAA...CTGCTTCCCCTCTCTCACAGTAATTATTTCTATGGTTAGTATGTAGGGGAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS TCA 90 bp | CCGTCTTGGCCACCGCGGCGGCTGCGTCGCAGCTCTTCAACATCATaGTCACCCCGTTTGGTTCCGGCAAGGGCGGAGGCCCCATCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PSWPPRRLRRSSSTS*SPRLVPARAEAPSG Trigger: TCCCGATGGGGCCTCCGCCCTTGCCGGAACCAAACGGGGTGATCATGATGTTGAAGAGCTGCGACGCAGCCGCCGCGGTGGCCAAGACGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 ENSMUST00000166712.9 |
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| CDS CCA 90 bp | CGCGGCGGCTGCGTCGCAGCTCTTCAACATCATGATCACCCCGTTTaGTTCCGGCAAGGGCGGAGGCCCCATCGGGAGCCCTTCCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGGCVAALQHHDHPV*FRQGRRPHREPFLR Trigger: CCTAAGGAAGGGCTCCCGATGGGGCCTCCGCCCTTGCCGGAACCAAACGGGGTGATCATGATGTTGAAGAGCTGCGACGCAGCCGCCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 ENSMUST00000166712.9 |
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| CDS GCA 90 bp | GTCCGCGGCGGCCTCCCAGTTGTTGTGATTCTGGTCGTCCATCATTaGCTCGTAGGTGAGCATTTCCTCCTCCTCCATGCTCTCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VRGGLPVVVILVVHH*LVGEHFLLLHALLH Trigger: ATGGAGGAGAGCATGGAGGAGGAGGAAATGCTCACCTACGAGGCAATGATGGACGACCAGAATCACAACAACTGGGAGGCCGCCGCGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 ENSMUST00000166712.9 |
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| CDS-3UTR CAA 90 bp | AATGGAAACCACTCAGTAAGAGTTGGTCCCCATGAGAGCTGGGACAGCAGGGTACTGGCCTGCAGCTCCTaGGAGACTCGCTCTAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NGNHSVRVGPHESWDSRVLACSS*ETRSKW Trigger: CCACTTAGAGCGAGTCTCCAAGGAGCTGCAGGCCAG...TACCCTGCTGTCCCAGCTCTCATGGGGACCAACTCTTACTGAGTGGTTTCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| CDS-3UTR CAA 90 bp | AATGGAAACCACTCAGTAAGAGTTGGTCCCCATGAGAGCTGGGACAGCAGGGTAGTGGAGGTGTTGATGTaGATAGTGGAGCTGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NGNHSVRVGPHESWDSRVVEVLM*IVELEV Trigger: CACCTCCAGCTCCACTATCAACATCAACACCTCCAC...TACCCTGCTGTCCCAGCTCTCATGGGGACCAACTCTTACTGAGTGGTTTCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| CDS-3UTR CAA 90 bp | GCAGGCCTCACTGTGCCTGGAACAGTTTCTGTAGCTCCAGTGTGTCTTCTCTTGTTGGAGGTGGAGGTGTaGATGTTGATAGTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGLTVPGTVSVAPVCLLLLEVEV*MLIVEL Trigger: CAGCTCCACTATCAACATCAACACCTCCACCTCCAA...CAAGAGAAGACACACTGGAGCTACAGAAACTGTTCCAGGCACAGTGAGGCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| CDS-3UTR CAA 90 bp | GATCCAGGGAGTAGCTCCCACTGTTGGCAGTCTCTACAGTATCATAGCCTGAAAGTGGAGGTGTTGATGTaGATAGTGGAGCTGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DPGSSSHCWQSLQYHSLKVEVLM*IVELEV Trigger: CACCTCCAGCTCCACTATCAACATCAACACCTCCAC...TTTCAGGCTATGATACTGTAGAGACTGCCAACAGTGGGAGCTACTCCCTGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| CDS-3UTR CAA 90 bp | TTTACCGGAGCCTTCAAACAGCACACTCTCCCTGGTGCATTCAAATATCAAACACTGGCCTGCAGCTCCTaGGAGACTCGCTCTAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FTGAFKQHTLPGAFKYQTLACSS*ETRSKW Trigger: CCACTTAGAGCGAGTCTCCAAGGAGCTGCAGGCCAG...TGTTTGATATTTGAATGCACCAGGGAGAGTGTGCTGTTTGAAGGCTCCGGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| CDS-3UTR CAA 90 bp | GATCCAGGGAGTAGCTCCCACTGTTGGCAGTCTCTACAGTATCATAGCCTGAAATTGGAGGTGGAGGTGTaGATGTTGATAGTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DPGSSSHCWQSLQYHSLKLEVEV*MLIVEL Trigger: CAGCTCCACTATCAACATCAACACCTCCACCTCCAA...TTTCAGGCTATGATACTGTAGAGACTGCCAACAGTGGGAGCTACTCCCTGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| CDS-3UTR CAA 90 bp | AACGACAAGAGGGCAGCAGCTAGACAAAACTGGGCTCTAGAGACATACACAGTGACATTCATTAGGAACTaGGAGGTGGAGGTGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: NDKRAAARQNWALETYTVTFIRN*EVEVLM Trigger: CATCAACACCTCCACCTCCAAGTTCCTAATGAATGT...CACTGTGTATGTCTCTAGAGCCCAGTTTTGTCTAGCTGCTGCCCTCTTGTCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| CDS-3UTR CAA 90 bp | ATCGTGAGATTGATGACATGGTCACATAGCTGCAAAGTGCACAAAGCTCAAGGCTTCTCTTTGAAGCTTTaGATCTTGGGCAGCGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: IVRLMTWSHSCKVHKAQGFSLKL*ILGSVL Trigger: GAGTACGCTGCCCAAGATCAAAAGCTTCAAAGAGAA...GCCTTGAGCTTTGTGCACTTTGCAGCTATGTGACCATGTCATCAATCTCACGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
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| CDS TCA 90 bp | GTGTACAGGCCTTTCACAATATTTGCCATAGTTGAAGGTGTGACCTaGAATGGTGTTGACTGGGCTTCTAAAAGTAAAGGCATTAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VYRPFTIFAIVEGVT*NGVDWASKSKGIRL Trigger: CAGCCTAATGCCTTTACTTTTAGAAGCCCAGTCAACACCATTTCAGGTCACACCTTCAACTATGGCAAATATTGTGAAAGGCCTGTACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS-3UTR CAA 90 bp | TTTACCGGAGCCTTCAAACAGCACACTCTCCCTGGTGCATTCAAATATCAAACATGGCACCATCTAATTTaGGCCAGTATGTGCTCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: FTGAFKQHTLPGAFKYQTWHHLI*ASMCSY Trigger: ATAAGAGCACATACTGGCCAAAATTAGATGGTGCCA...TGTTTGATATTTGAATGCACCAGGGAGAGTGTGCTGTTTGAAGGCTCCGGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
||
| CDS-3UTR CAA 90 bp | AGCATCGTGAGATTGATGACATGGTCACATAGCTGCAAAGTGCACAAAGCTCAATGGCACCATCTAATTTaGGCCAGTATGTGCTCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: SIVRLMTWSHSCKVHKAQWHHLI*ASMCSY Trigger: ATAAGAGCACATACTGGCCAAAATTAGATGGTGCCA...TTGAGCTTTGTGCACTTTGCAGCTATGTGACCATGTCATCAATCTCACGATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 |
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| CDS-3UTR CAA 90 bp | TTTAGTCACGTTCAGCAAATAAGTAGTAAAGGACAGTGCCAGATGACAAATGTCCTGTATAAGTTCTCTTaGAAGCTTTTGATCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSHVQQISSKGQCQMTNVLYKFS*KLLILG Trigger: GCCCAAGATCAAAAGCTTCAAAGAGAACTTATACAG...GACATTTGTCATCTGGCACTGTCCTTTACTACTTATTTGCTGAACGTGACTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS TCA 72 bp | CCACCGCGGCGGCTGCGTCGCAGCTCTTCAACATCATaGTCACCCCGTTTGGTTCCGGCAAGGGCGGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPRRLRRSSSTS*SPRLVPARAEA Trigger: GGCCTCCGCCCTTGCCGGAACCAAACGGGGTGATCATGATGTTGAAGAGCTGCGACGCAGCCGCCGCGGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 ENSMUST00000166712.9 |
||
| CDS CCA 72 bp | TGCGTCGCAGCTCTTCAACATCATGATCACCCCGTTTaGTTCCGGCAAGGGCGGAGGCCCCATCGGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: CVAALQHHDHPV*FRQGRRPHREP Trigger: GGGCTCCCGATGGGGCCTCCGCCCTTGCCGGAACCAAACGGGGTGATCATGATGTTGAAGAGCTGCGACGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 ENSMUST00000166712.9 |
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| CDS CAA 90 bp | GTGTTGATGTTGATAGTGGAGCTGGAGGTGGGGGCAGGGGCCGTCTaGGCCACCGCGGCGGCTGCGTCGCAGCTCTTCAACATCATGATC | + |
|
Preference number: 6 (lower is better) Translates to: VLMLIVELEVGAGAV*ATAAAASQLFNIMI Trigger: GATCATGATGTTGAAGAGCTGCGACGCAGCCGCCGCGGTGGCCAAGACGGCCCCTGCCCCCACCTCCAGCTCCACTATCAACATCAACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 ENSMUST00000166712.9 |
||
| CDS GCA 72 bp | GGCCTCCCAGTTGTTGTGATTCTGGTCGTCCATCATTaGCTCGTAGGTGAGCATTTCCTCCTCCTCCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLPVVVILVVHH*LVGEHFLLLHA Trigger: AGCATGGAGGAGGAGGAAATGCTCACCTACGAGGCAATGATGGACGACCAGAATCACAACAACTGGGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 ENSMUST00000166712.9 |
||
| CDS CAA 90 bp | ATCACCTCTGGTAAAACCGTTCTGTATAAGTTCTCTTTGAAGCTTTaGATCTTGGGCAGCGTACTCAGAAAGTTCAGATTCCACAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ITSGKTVLYKFSLKL*ILGSVLRKFRFHSR Trigger: CCGGCTGTGGAATCTGAACTTTCTGAGTACGCTGCCCAAGATCAAAAGCTTCAAAGAGAACTTATACAGAACGGTTTTACCAGAGGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000166712.9 |
||
| CDS CAA 90 bp | CCGGGACTGATCACCTCTGGTAAAACCGTTCTGTATAAGTTCTCTTaGAAGCTTTTGATCTTGGGCAGCGTACTCAGAAAGTTCAGATTC | + |
|
Preference number: 6 (lower is better) Translates to: PGLITSGKTVLYKFS*KLLILGSVLRKFRF Trigger: GAATCTGAACTTTCTGAGTACGCTGCCCAAGATCAAAAGCTTCAAAGAGAACTTATACAGAACGGTTTTACCAGAGGTGATCAGTCCCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000166712.9 |
||
| CDS CAA 72 bp | ACCGTTCTGTATAAGTTCTCTTTGAAGCTTTTGATCTaGGGCAGCGTACTCAGAAAGTTCAGATTCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: TVLYKFSLKLLI*GSVLRKFRFHS Trigger: GCTGTGGAATCTGAACTTTCTGAGTACGCTGCCCAAGATCAAAAGCTTCAAAGAGAACTTATACAGAACGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000166712.9 |
||
| CDS TCA 72 bp | CCTTTCACAATATTTGCCATAGTTGAAGGTGTGACCTaGAATGGTGTTGACTGGGCTTCTAAAAGTAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PFTIFAIVEGVT*NGVDWASKSKG Trigger: GCCTTTACTTTTAGAAGCCCAGTCAACACCATTTCAGGTCACACCTTCAACTATGGCAAATATTGTGAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081790.15 |
||
| CDS CCA 72 bp | TATAGTCACCAGGACTCTGGGTTAAAAGTTGATCTATaGCACCATCTAATTTTGGCCAGTATGTGCTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: YSHQDSGLKVDL*HHLILASMCSY Trigger: ATAAGAGCACATACTGGCCAAAATTAGATGGTGCCATAGATCAACTTTTAACCCAGAGTCCTGGTGACTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 ENSMUST00000166712.9 |
||
| CDS CAA 72 bp | GGTAAAACCGTTCTGTATAAGTTCTCTTTGAAGCTTTaGATCTTGGGCAGCGTACTCAGAAAGTTCAGATTC | + |
|
Preference number: 6 (lower is better) Translates to: GKTVLYKFSLKL*ILGSVLRKFRF Trigger: GAATCTGAACTTTCTGAGTACGCTGCCCAAGATCAAAAGCTTCAAAGAGAACTTATACAGAACGGTTTTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081790.15 ENSMUST00000166712.9 |
||
| CDS GCA 72 bp | ATTCATATATATGAAAAGAGGCACGATGCTCTGCAATaGTCCCATATACTGTCCCAGAGCTATATTAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: IHIYEKRHDALQ*SHILSQSYIKS Trigger: AGATTTAATATAGCTCTGGGACAGTATATGGGAGCATTGCAGAGCATCGTGCCTCTTTTCATATATATGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 ENSMUST00000166712.9 |
||
| CDS GCA 72 bp | AACTTATTCATATATATGAAAAGAGGCACGATGCTCTaGAATGCTCCCATATACTGTCCCAGAGCTATATTA | + |
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Preference number: 6 (lower is better) Translates to: NLFIYMKRGTML*NAPIYCPRAIL Trigger: TAATATAGCTCTGGGACAGTATATGGGAGCATTGCAGAGCATCGTGCCTCTTTTCATATATATGAATAAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 ENSMUST00000166712.9 |
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| CDS CAA 72 bp | TCTGGGTTAAAAGTTGATCTATGGCACCATCTAATTTaGGCCAGTATGTGCTCTTATAATCTTCAATTGTTA | + |
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Preference number: 6 (lower is better) Translates to: SGLKVDLWHHLI*ASMCSYNLQLL Trigger: TAACAATTGAAGATTATAAGAGCACATACTGGCCAAAATTAGATGGTGCCATAGATCAACTTTTAACCCAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081790.15 ENSMUST00000111460.5 ENSMUST00000166712.9 |
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