Pregenerated sensors for CACTIN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034889Ensembl transcript IDs: ENSMUST00000050867.8, ENSMUST00000218120.2
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCACTTGGCCTTCCCACCTaGGAGCTGTCCAGGGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: RPFCHPKQSSQEQLKILSLGLPT*ELSRGQ Trigger: CTGGCCCCTGGACAGCTCCCAGGTGGGAAGGCCAAG...TGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCCAAGAACAGTTAAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGCTGAAGGAGGCCTCCTaGTCCTCTTGGCCTTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: SSQEQLKILSGQAGICQRLKEAS*SSWPSH Trigger: GTGGGAAGGCCAAGAGGACCAGGAGGCCTCCTTCAG...CCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTTAACTGTTCTTGGGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| 3UTR TCA 72 bp | TGCCAGAGGGGCTGCGGCCAGCACAGTGCTGGTGACTaGAGTCCACAGATTCCTACGGCTTCTGAAGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: CQRGCGQHSAGD*SPQIPTASEGG Trigger: GCCTCCTTCAGAAGCCGTAGGAATCTGTGGACTTCAGTCACCAGCACTGTGCTGGCCGCAGCCCCTCTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| 3UTR GCA 72 bp | GAACAGTTAAAAATCCTTTCAGGACAGGCAGGGATCTaGCAGAGGGGCTGCGGCCAGCACAGTGCTGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: EQLKILSGQAGI*QRGCGQHSAGD Trigger: GTCACCAGCACTGTGCTGGCCGCAGCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTTAACTGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| 3UTR GCA 72 bp | CCCCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTaGCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: PRLNKSMETRPF*HPKQSSQEQLK Trigger: TTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | CTCCTGGTCCTCTTGGCCTTCCCACCTGGGAGCTGTCCAGGGGCCAGCCTGACAAGCCGCAGCCGTTCCTaGAGGCTCTGCTGCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LLVLLAFPPGSCPGASLTSRSRS*RLCCWL Trigger: GAGCCAGCAGCAGAGCCTGCAGGAACGGCTGCGGCT...TGTCAGGCTGGCCCCTGGACAGCTCCCAGGTGGGAAGGCCAAGAGGACCAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | CTCCTGGTCCTCTTGGCCTTCCCACCTGGGAGCTGTCCAGGGGCCAGCCTGACACAGAGGCAGCTCGTGTaGCGTGAGCAGCCGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LLVLLAFPPGSCPGASLTQRQLV*REQPWA Trigger: AGCCCACGGCTGCTCACGGCACACGAGCTGCCTCTG...TGTCAGGCTGGCCCCTGGACAGCTCCCAGGTGGGAAGGCCAAGAGGACCAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CCA 90 bp | GTCCACAGATTCCTACGGCTTCTGAAGGAGGCCTCCTGGTCCTCTTGGCCTTCCTCAGGTTCGGGGCTGTaGGCGGCCGAGGGCTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: VHRFLRLLKEASWSSWPSSGSGL*AAEGSD Trigger: GTCGGAGCCCTCGGCCGCCCACAGCCCCGAACCTGA...GGAAGGCCAAGAGGACCAGGAGGCCTCCTTCAGAAGCCGTAGGAATCTGTGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CCA 90 bp | GTCCACAGATTCCTACGGCTTCTGAAGGAGGCCTCCTGGTCCTCTTGGCCTTCCTGCCGTGAGCAGCCGTaGGCTGTAGCGGCCGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: VHRFLRLLKEASWSSWPSCREQP*AVAAGV Trigger: GACGCCGGCCGCTACAGCCCACGGCTGCTCACGGCA...GGAAGGCCAAGAGGACCAGGAGGCCTCCTTCAGAAGCCGTAGGAATCTGTGGAC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | GGATCTGCCAGAGGGGCTGCGGCCAGCACAGTGCTGGTGACTGAAGTCCACAGATTCTGCCTCCCCCTCTaGTTCTCCTGGTGCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GSARGAAASTVLVTEVHRFCLPL*FSWCCG Trigger: GCCACAGCACCAGGAGAAGCAGAGGGGGAGGCAGAA...TCTGTGGACTTCAGTCACCAGCACTGTGCTGGCCGCAGCCCCTCTGGCAGATCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | CACAGATTCCTACGGCTTCTGAAGGAGGCCTCCTGGTCCTCTTGGCCTTCCCACTGCTGGCGAGACAGCTaGAGGCGCTGCAGGTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: HRFLRLLKEASWSSWPSHCWRDS*RRCRSS Trigger: CGAGGACCTGCAGCGCCTGCAGCTGTCTCGCCAGCA...GTGGGAAGGCCAAGAGGACCAGGAGGCCTCCTTCAGAAGCCGTAGGAATCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CCA 90 bp | CTCCTGGTCCTCTTGGCCTTCCCACCTGGGAGCTGTCCAGGGGCCAGCCTGACAGCTGGAAGATTCCATTaGCGAACTGGCAGCGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: LLVLLAFPPGSCPGASLTAGRFH*RTGSGS Trigger: GCTTCCGCTGCCAGTTCGCCAATGGAATCTTCCAGC...TGTCAGGCTGGCCCCTGGACAGCTCCCAGGTGGGAAGGCCAAGAGGACCAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | AGATTCCTACGGCTTCTGAAGGAGGCCTCCTGGTCCTCTTGGCCTTCCCACCTGAGGCTCCAGCACGTGTaGGTCCAGAGGCAGCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: RFLRLLKEASWSSWPSHLRLQHV*VQRQLV Trigger: CACGAGCTGCCTCTGGACGCACACGTGCTGGAGCCT...CAGGTGGGAAGGCCAAGAGGACCAGGAGGCCTCCTTCAGAAGCCGTAGGAATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CCA 90 bp | GGATCTGCCAGAGGGGCTGCGGCCAGCACAGTGCTGGTGACTGAAGTCCACAGATTGCCCTCGATGCCCTaGAAGATGACCTGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GSARGAAASTVLVTEVHRLPSMP*KMTCSW Trigger: CCAGCTGCAGGTCATCTTCCAGGGCATCGAGGGCAA...TCTGTGGACTTCAGTCACCAGCACTGTGCTGGCCGCAGCCCCTCTGGCAGATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CCA 90 bp | CCACACGGGGTTCCCCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACGGCCCGGCCGCCCAGTaGCATCTCCACGCTGAACTG | + |
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Preference number: 4 (lower is better) Translates to: PHGVPRLNKSMETRPFCHGPAAQ*HLHAEL Trigger: CAGTTCAGCGTGGAGATGCCACTGGGCGGCCGGGCC...GTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGGAACCCCGTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | GGATCTGCCAGAGGGGCTGCGGCCAGCACAGTGCTGGTGACTGAAGTCCACAGATCGCTCTCCACACCCTaGTCCTGCTTCAGCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: GSARGAAASTVLVTEVHRSLSTP*SCFSLN Trigger: GTTCAAGCTGAAGCAGGAGCAGGGTGTGGAGAGCGA...TCTGTGGACTTCAGTCACCAGCACTGTGCTGGCCGCAGCCCCTCTGGCAGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | CAGATTCCTACGGCTTCTGAAGGAGGCCTCCTGGTCCTCTTGGCCTTCCCACCTAACTGTGCCTCATCCTaGCCCATGCCCTCCCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: QIPTASEGGLLVLLAFPPNCASS*PMPSLA Trigger: TGCGAGGGAGGGCATGGGGCAGGATGAGGCACAGTT...AGGTGGGAAGGCCAAGAGGACCAGGAGGCCTCCTTCAGAAGCCGTAGGAATCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CCA 90 bp | CCCCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTCTCACGGCGCTCACCTaGGCCCTTGCCAGAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PRLNKSMETRPFCHPKQSLTALT*ALARGL Trigger: GAGGCCTCTGGCAAGGGCCCAGGTGAGCGCCGTGAG...AGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR TCA 90 bp | AAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGGCTGCGGCCAGCACAGCGTCATCCTCTGCGCTaGTGTACTTGGCCAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: KNPFRTGRDLPEGLRPAQRHPLR*CTWPGG Trigger: ACCTCCTGGCCAAGTACATCAGCGCAGAGGATGACG...CTGTGCTGGCCGCAGCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR TCA 90 bp | AGATTCCTACGGCTTCTGAAGGAGGCCTCCTGGTCCTCTTGGCCTTCCCACCTGCGATGCCCTGGAAGATaGCCTGCAGCTGGTTGTACG | + |
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Preference number: 4 (lower is better) Translates to: RFLRLLKEASWSSWPSHLRCPGR*PAAGCT Trigger: CGTACAACCAGCTGCAGGTCATCTTCCAGGGCATCG...CAGGTGGGAAGGCCAAGAGGACCAGGAGGCCTCCTTCAGAAGCCGTAGGAATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR TCA 90 bp | CCCCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTCCGAGGGCTCCGACTTaGGGATGGGGAACAGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: PRLNKSMETRPFCHPKQSPRAPT*GWGTAA Trigger: AGCCGCTGTTCCCCATCCTCAAGTCGGAGCCCTCGG...AGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | AGATTCCTACGGCTTCTGAAGGAGGCCTCCTGGTCCTCTTGGCCTTCCCACCTGCACTCGAAGCCCGTGTaGACGCGGTTGAAGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: RFLRLLKEASWSSWPSHLHSKPV*TRLKKR Trigger: TCGCTTCTTCAACCGCGTGCACACGGGCTTCGAGTG...CAGGTGGGAAGGCCAAGAGGACCAGGAGGCCTCCTTCAGAAGCCGTAGGAATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR TCA 90 bp | AAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGGCTGCGGCCAGCACAGCAATCTCATCCTCTGTaGTGGTCGTCATGTCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: KNPFRTGRDLPEGLRPAQQSHPL*WSSCPA Trigger: GGCGGGACATGACGACCATCACAGAGGATGAGATTG...CTGTGCTGGCCGCAGCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | TCCCCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTCCTGCAGGCTCTGCTaGTGGCTCAGGGCCAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: SPVEQVHGNKTFLPPQAVSCRLC*WLRARV Trigger: TACCCTGGCCCTGAGCCAGCAGCAGAGCCTGCAGGA...GACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | CTCCTGGTCCTCTTGGCCTTCCCACCTGGGAGCTGTCCAGGGGCCAGCCTGACAAGAAGTCCACATTCTTaGCCTGCTCTAGTTCCATGT | + |
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Preference number: 4 (lower is better) Translates to: LLVLLAFPPGSCPGASLTRSPHS*PALVPC Trigger: ACATGGAACTAGAGCAGGGCAAGAATGTGGACTTCT...TGTCAGGCTGGCCCCTGGACAGCTCCCAGGTGGGAAGGCCAAGAGGACCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | TCCCAAGAACAGTTAAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGGCCCCCGGCCCGGATCTTaGCCTCGATGCCCTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SQEQLKILSGQAGICQRGPRPGS*PRCPGR Trigger: TCTTCCAGGGCATCGAGGGCAAGATCCGGGCCGGGG...GCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTTAACTGTTCTTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR TCA 90 bp | CCACACGGGGTTCCCCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACGCGTCTCGAAGGCCTTaGGCAGCTCTTCTTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PHGVPRLNKSMETRPFCHASRRP*AALLAA Trigger: AGCAGCAAGAAGAGCTGCTCAAGGCCTTCGAGACGC...GTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGGAACCCCGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | CCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCAGGACAGGCAGGGCTCACCTGGGCCCTTaGCAGAGGCCTCCAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PPQAVFPRTVKNPFRTGRAHLGP*QRPPAC Trigger: GCAAGCTGGAGGCCTCTGGCAAGGGCCCAGGTGAGC...CCTGCCTGTCCTGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | CCCCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTTCCTCCATCAGCACTaGCTCCCCTTCTGCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: PRLNKSMETRPFCHPKQSFLHQH*LPFCLP Trigger: GGGGAGGCAGAAGGGGAGGCAGTGCTGATGGAGGAA...AGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CCA 90 bp | AAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGGCTGCGGCCAGCACAGAGCCCTGCACAATCTTaGGTGGAGGGTTGTCGAAGT | + |
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Preference number: 4 (lower is better) Translates to: KNPFRTGRDLPEGLRPAQSPAQS*VEGCRS Trigger: ACTTCGACAACCCTCCACCCAAGATTGTGCAGGGCT...CTGTGCTGGCCGCAGCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR TCA 90 bp | CCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCCGTGTGCACGCGGTTaGAGAAGCGAGGTTTTCGCG | + |
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Preference number: 4 (lower is better) Translates to: PVEQVHGNKTFLPPQAVFPCARG*RSEVFA Trigger: CGCGAAAACCTCGCTTCTTCAACCGCGTGCACACGG...GAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR TCA 90 bp | CCACACGGGGTTCCCCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACTGGCGCGCTTACGGATaGGGTCTGGGTAGAAGATGT | + |
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Preference number: 4 (lower is better) Translates to: PHGVPRLNKSMETRPFCHWRAYG*GLGRRC Trigger: ACATCTTCTACCCAGACCTCATCCGTAAGCGCGCCA...GTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGGAACCCCGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CCA 90 bp | CTCCTGGTCCTCTTGGCCTTCCCACCTGGGAGCTGTCCAGGGGCCAGCCTGACACTTACGGATGAGGTCTaGGTAGAAGATGTTGAATTT | + |
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Preference number: 4 (lower is better) Translates to: LLVLLAFPPGSCPGASLTLTDEV*VEDVEF Trigger: AAATTCAACATCTTCTACCCAGACCTCATCCGTAAG...TGTCAGGCTGGCCCCTGGACAGCTCCCAGGTGGGAAGGCCAAGAGGACCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CCA 90 bp | AGAACAGTTAAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGGCTGCGGATTCCATTGGCGAACTaGCAGCGGAAGCCATGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RTVKNPFRTGRDLPEGLRIPLAN*QRKPWR Trigger: CCGCCATGGCTTCCGCTGCCAGTTCGCCAATGGAAT...CCGCAGCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTTAACTGTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR TCA 90 bp | GGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCGCTGCAGGTCCTCGTaGGGCTCCAGCACGTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: GNKTFLPPQAVFPRTVKNRCRSS*GSSTCA Trigger: CGCACACGTGCTGGAGCCTCACGAGGACCTGCAGCG...ATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | ACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCAGGCTTCCGAATCTGACCTaGGCCCTCGGCTGCGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: TFLPPQAVFPRTVKNPFRLPNLT*ALGCAA Trigger: AGCGGCGCAGCCGAGGGCGCAGGTCAGATTCGGAAG...CCTGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | CCACACGGGGTTCCCCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACTTGAGCAGCTCTTCTTaGTGCTTCCGCTCCTCACGA | + |
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Preference number: 4 (lower is better) Translates to: PHGVPRLNKSMETRPFCHLSSSS*CFRSSR Trigger: TCGTGAGGAGCGGAAGCAGCAAGAAGAGCTGCTCAA...GTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGGAACCCCGTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | CCCCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTCAGGTCGTCATCCTCTaGGCTGATGTACTTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PRLNKSMETRPFCHPKQSQVVIL*ADVLGQ Trigger: CTGGCCAAGTACATCAGCGCAGAGGATGACGACCTG...AGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | TCCCAAGAACAGTTAAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGGCCTCTGCTTCTCCTGGTaGTGTGGCCTCCTCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SQEQLKILSGQAGICQRGLCFSW*CGLLRF Trigger: GAACCTGAGGAGGCCACAGCACCAGGAGAAGCAGAG...GCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTTAACTGTTCTTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CCA 90 bp | CCCCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCTTCTCCTCCAGGTaGCTGATGCCCTTCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PRLNKSMETRPFCHPKQSSFSSR*LMPFFS Trigger: GGAGAAGAAGGGCATCAGCCACCTGGAGGAGAAGGA...AGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CCA 90 bp | CCACACGGGGTTCCCCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACAGACGGTTGTCTTCCTaGATCCTCTTGTTGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PHGVPRLNKSMETRPFCHRRLSS*ILLLRS Trigger: GGAGCGCAACAAGAGGATCCAGGAAGACAACCGTCT...GTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGGAACCCCGTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CCA 90 bp | CACAGATTCCTACGGCTTCTGAAGGAGGCCTCCTGGTCCTCTTGGCCTTCCCACAAGATGACCTGCAGCTaGTTGTACGTCTTTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: HRFLRLLKEASWSSWPSHKMTCS*LYVFPL Trigger: CAAGGGAAAGACGTACAACCAGCTGCAGGTCATCTT...GTGGGAAGGCCAAGAGGACCAGGAGGCCTCCTTCAGAAGCCGTAGGAATCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CCA 90 bp | GGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATAGCCCATGTCCAGGTTaGGGCCCCCGGCCCGGATCT | + |
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Preference number: 4 (lower is better) Translates to: GNKTFLPPQAVFPRTVKNSPCPG*GPRPGS Trigger: AGATCCGGGCCGGGGGCCCCAACCTGGACATGGGCT...ATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CCA 90 bp | AGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCAGGCGCTCACGGAGCCTaGCCCTGGCCATGTGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: RPFCHPKQSSQEQLKILSGAHGA*PWPCVH Trigger: GTGCACACATGGCCAGGGCCAGGCTCCGTGAGCGCC...TGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CCA 90 bp | AAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGGCTGCGGCCAGCACAGAAGTGGAACCAGAGCTaGAAGATTCCATTGGCGAAC | + |
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Preference number: 4 (lower is better) Translates to: KNPFRTGRDLPEGLRPAQKWNQS*KIPLAN Trigger: GTTCGCCAATGGAATCTTCCAGCTCTGGTTCCACTT...CTGTGCTGGCCGCAGCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR TCA 90 bp | TCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAGTGGCATCTCCACGCTaGACTGTGCCTCATCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SMETRPFCHPKQSSQEQLVASPR*TVPHPA Trigger: GGCAGGATGAGGCACAGTTCAGCGTGGAGATGCCAC...TAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR GCA 90 bp | TCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTACTCCACGCTGAACTGTaGCTCATCCTGCCCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SMETRPFCHPKQSSQEQLLHAEL*LILPHA Trigger: GGCATGGGGCAGGATGAGGCACAGTTCAGCGTGGAG...TAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCAGGTGCAGGCTCTGCTGCTaGCTCAGGGCCAGGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TFLPPQAVFPRTVKNPFRCRLCC*LRARVA Trigger: AGCTACCCTGGCCCTGAGCCAGCAGCAGAGCCTGCA...CCTGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CCA 90 bp | CCCCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTAGGGGTTGTCGGTGTTaGTGTAGCCCATGTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRLNKSMETRPFCHPKQSRGCRC*CSPCTP Trigger: AGGAGTACATGGGCTACACCAACACCGACAACCCCT...AGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CCA 90 bp | TCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAGCTCCTGCTCCCTCATaGCTTTCTCCCGTTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SMETRPFCHPKQSSQEQLAPAPS*LSPVPA Trigger: AGCGGGAACGGGAGAAAGCCATGAGGGAGCAGGAGC...TAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CCA 90 bp | CCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCAGGACAGGCAGGTCCGCCAGGCTCTGCTaGATCAGGTCTTCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PPQAVFPRTVKNPFRTGRSARLC*IRSSSI Trigger: GATGGAGGAAGACCTGATCCAGCAGAGCCTGGCGGA...CCTGCCTGTCCTGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAAGAACAGTTAAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGGCCCTGGATCCTCTTGTTaGGCTCCTTCAGCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQEQLKILSGQAGICQRGPGSSC*APSAPS Trigger: AGAAGGAGCTGAAGGAGCGCAACAAGAGGATCCAGG...GCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTTAACTGTTCTTGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR GCA 90 bp | AACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTGCCTCCTTCTCCCGCTaGAGCAACTCCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NKTFLPPQAVFPRTVKNPASFSR*SNSSSC Trigger: GCAGGAGCTGGAGTTGCTGCAGCGGGAGAAGGAGGC...AGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR GCA 90 bp | AACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTGGCCCTGGCCATGTGTaGACGCAACTGCTGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKTFLPPQAVFPRTVKNPGPGHV*TQLLQQ Trigger: CTGCTGCAGCAGTTGCGTGCACACATGGCCAGGGCC...AGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CCA 90 bp | AGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCATGGCAGCGGAAGCCATaGCGGTGCGAATACTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RPFCHPKQSSQEQLKILSWQRKP*RCEYSH Trigger: GTGGGAGTATTCGCACCGCCATGGCTTCCGCTGCCA...TGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR TCA 90 bp | ACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCAGGAGGCCTTGTTCCAGATaGAGGTGCCGAGCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TFLPPQAVFPRTVKNPFRRPCSR*RCRAGC Trigger: ACAACCTGCTCGGCACCTTCATCTGGAACAAGGCCT...CCTGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR TCA 90 bp | TCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTATGTACGTCTTTCCCTTaGACACCGACTGCACATCGG | + |
|
Preference number: 4 (lower is better) Translates to: SMETRPFCHPKQSSQEQLCTSFP*TPTAHR Trigger: CCGATGTGCAGTCGGTGTTCAAGGGAAAGACGTACA...TAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR TCA 90 bp | AGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCAGGTAGCGGTAGCGCTTaGAGTGGAACCAGAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPFCHPKQSSQEQLKILSGSGSA*SGTRAG Trigger: TCCAGCTCTGGTTCCACTTCAAGCGCTACCGCTACC...TGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR GCA 90 bp | TCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTACGTCTTAAAGTGTTCTaGCTCCTTCTCCCGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SMETRPFCHPKQSSQEQLRLKVF*LLLPLQ Trigger: CTGCAGCGGGAGAAGGAGGCAGAACACTTTAAGACG...TAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CCA 90 bp | AGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCACTAAGAACATCTTGGTaGCGCTCACGGAGCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RPFCHPKQSSQEQLKILSLRTSW*RSRSLA Trigger: GGCCAGGCTCCGTGAGCGCCACCAAGATGTTCTTAG...TGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR TCA 90 bp | AGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCACTAGCCGCAGCTGTTTaGCCTTTTGCAGCTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RPFCHPKQSSQEQLKILSLAAAV*PFAAPD Trigger: GTCTGGAGCTGCAAAAGGTCAAACAGCTGCGGCTAG...TGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR GCA 90 bp | AGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCACAGAGGCCTCCAGCTTaGGGAGCTTGGCAATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RPFCHPKQSSQEQLKILSQRPPA*GAWQSH Trigger: ATGAGATTGCCAAGCTCCGCAAGCTGGAGGCCTCTG...TGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR GCA 90 bp | AACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTCCCTTGAACACCGACTaGACATCGGAGCTGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NKTFLPPQAVFPRTVKNPPLNTD*TSELTE Trigger: CTCAGTCAGCTCCGATGTGCAGTCGGTGTTCAAGGG...AGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR GCA 90 bp | AGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCAATGTGTGCACGCAACTaGTGCAGCAGGCTCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RPFCHPKQSSQEQLKILSMCARN*CSRLSQ Trigger: TTGGGAGAGCCTGCTGCAGCAGTTGCGTGCACACAT...TGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCAGGACAGTGGAAGCTGTCCTCTTaGTCCTCCCACGTCTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FCHPKQSSQEQLKILSGQWKLSS*SSHVLK Trigger: CTTTAAGACGTGGGAGGAGCAAGAGGACAGCTTCCA...CTGTCCTGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCAGGACAGCCCTGGAAGATGACCTaGAGCTGGTTGTACGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FCHPKQSSQEQLKILSGQPWKMT*SWLYVF Trigger: AAAGACGTACAACCAGCTGCAGGTCATCTTCCAGGG...CTGTCCTGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCAAGAACAGTTAAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGAGTTCCATGTACACCTaGATGTCTTCTAGTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSQEQLKILSGQAGICQRSSMYT*MSSSRS Trigger: GGACCTACTAGAAGACATCCAGGTGTACATGGAACT...CCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTTAACTGTTCTTGGGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS TCA 90 bp | CCGGCTTCGACTCCGCTGCTTCCGACCCCTGCGACCCACAGACCGTaGGCGCGAGCGAGAGTCCCGACCCATTTGGCGGCCCGCGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PASTPLLPTPATHRP*ARARVPTHLAARAA Trigger: CGCGGCGCGGGCCGCCAAATGGGTCGGGACTCTCGCTCGCGCTCACGGTCTGTGGGTCGCAGGGGTCGGAAGCAGCGGAGTCGAAGCCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 90 bp | GGCTGCGGCTCCGGCCCCGGCTTCGACTCCGCTGCTTCCGACCCCTaGGACCCACAGACCGTGAGCGCGAGCGAGAGTCCCGACCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: GCGSGPGFDSAASDP*DPQTVSASESPDPF Trigger: AAATGGGTCGGGACTCTCGCTCGCGCTCACGGTCTGTGGGTCGCAGGGGTCGGAAGCAGCGGAGTCGAAGCCGGGGCCGGAGCCGCAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS TCA 90 bp | CGTGAGGCTCCAGCACGTGTGCGTCCAGAGGCAGCTCGTGTGCCGTaGGCAGCCGTGGGCTGTAGCGGCCGGCGTCATAGTCCGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: REAPARVRPEAARVP*AAVGCSGRRHSPPG Trigger: GCCTGGCGGACTATGACGCCGGCCGCTACAGCCCACGGCTGCTCACGGCACACGAGCTGCCTCTGGACGCACACGTGCTGGAGCCTCACG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS TCA 90 bp | GTCGCTCCTCAGGTTCGGGGCTGTGGGCGGCCGAGGGCTCCGACTTaGGGATGGGGAACAGCGGCTCGCTCTCCACACCCTGCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VAPQVRGCGRPRAPT*GWGTAARSPHPAPA Trigger: AGCAGGAGCAGGGTGTGGAGAGCGAGCCGCTGTTCCCCATCCTCAAGTCGGAGCCCTCGGCCGCCCACAGCCCCGAACCTGAGGAGCGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS GCA 90 bp | TGCTGCTTCCGCTCCTCACGAAGCCGCAGCCGTTCCTGCAGGCTCTaGTGCTGGCTCAGGGCCAGGGTAGCTGTCCCGGGACTCCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CCFRSSRSRSRSCRL*CWLRARVAVPGLRE Trigger: CTCCCGGAGTCCCGGGACAGCTACCCTGGCCCTGAGCCAGCAGCAGAGCCTGCAGGAACGGCTGCGGCTTCGTGAGGAGCGGAAGCAGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 90 bp | GTCCTCGTGAGGCTCCAGCACGTGTGCGTCCAGAGGCAGCTCGTGTaGCGTGAGCAGCCGTGGGCTGTAGCGGCCGGCGTCATAGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VLVRLQHVCVQRQLV*REQPWAVAAGVIVR Trigger: GCGGACTATGACGCCGGCCGCTACAGCCCACGGCTGCTCACGGCACACGAGCTGCCTCTGGACGCACACGTGCTGGAGCCTCACGAGGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 90 bp | GCCCGGCCGCCCAGTGGCATCTCCACGCTGAACTGTGCCTCATCCTaGCCCATGCCCTCCCTCGCACGCCGGAAGAAGATGTCCTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ARPPSGISTLNCASS*PMPSLARRKKMSSA Trigger: CGCTGAGGACATCTTCTTCCGGCGTGCGAGGGAGGGCATGGGGCAGGATGAGGCACAGTTCAGCGTGGAGATGCCACTGGGCGGCCGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CCA 90 bp | TTCCGCTCCTCACGAAGCCGCAGCCGTTCCTGCAGGCTCTGCTGCTaGCTCAGGGCCAGGGTAGCTGTCCCGGGACTCCGGGAGCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FRSSRSRSRSCRLCC*LRARVAVPGLRERL Trigger: AAGACGCTCCCGGAGTCCCGGGACAGCTACCCTGGCCCTGAGCCAGCAGCAGAGCCTGCAGGAACGGCTGCGGCTTCGTGAGGAGCGGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CCA 90 bp | CAGCACGTGTGCGTCCAGAGGCAGCTCGTGTGCCGTGAGCAGCCGTaGGCTGTAGCGGCCGGCGTCATAGTCCGCCAGGCTCTGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QHVCVQRQLVCREQP*AVAAGVIVRQALLD Trigger: ATCCAGCAGAGCCTGGCGGACTATGACGCCGGCCGCTACAGCCCACGGCTGCTCACGGCACACGAGCTGCCTCTGGACGCACACGTGCTG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CCA 90 bp | TCGCGGCCGGTACTTGTCGGCCCACAGATAGGCCCGGCCGCCCAGTaGCATCTCCACGCTGAACTGTGCCTCATCCTGCCCCATGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SRPVLVGPQIGPAAQ*HLHAELCLILPHAL Trigger: GAGGGCATGGGGCAGGATGAGGCACAGTTCAGCGTGGAGATGCCACTGGGCGGCCGGGCCTATCTGTGGGCCGACAAGTACCGGCCGCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 90 bp | CGGGGTGGTCGAAGGCTCTGGCTTCGCCTCCTAGACTTCTGCCGCTaGTCTCCTTCCGAATCTGACCTGCGCCCTCGGCTGCGCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RGGRRLWLRLLDFCR*SPSESDLRPRLRRL Trigger: CAAGCGGCGCAGCCGAGGGCGCAGGTCAGATTCGGAAGGAGAGCAGCGGCAGAAGTCTAGGAGGCGAAGCCAGAGCCTTCGACCACCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 90 bp | AGACAGCTGCAGGCGCTGCAGGTCCTCGTGAGGCTCCAGCACGTGTaGGTCCAGAGGCAGCTCGTGTGCCGTGAGCAGCCGTGGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RQLQALQVLVRLQHV*VQRQLVCREQPWAV Trigger: TACAGCCCACGGCTGCTCACGGCACACGAGCTGCCTCTGGACGCACACGTGCTGGAGCCTCACGAGGACCTGCAGCGCCTGCAGCTGTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS TCA 90 bp | TGGCCAGTCGCCGCGCACGCTTCTCCTCAGGCGTCTCGAAGGCCTTaGGCAGCTCTTCTTGCTGCTTCCGCTCCTCACGAAGCCGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WPVAAHASPQASRRP*AALLAASAPHEAAA Trigger: GGCTGCGGCTTCGTGAGGAGCGGAAGCAGCAAGAAGAGCTGCTCAAGGCCTTCGAGACGCCTGAGGAGAAGCGTGCGCGGCGACTGGCCA 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 90 bp | TGCCATCGGGGTGGTCGAAGGCTCTGGCTTCGCCTCCTAGACTTCTaGCGCTGCTCTCCTTCCGAATCTGACCTGCGCCCTCGGCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: CHRGGRRLWLRLLDF*RCSPSESDLRPRLR Trigger: GCGCAGCCGAGGGCGCAGGTCAGATTCGGAAGGAGAGCAGCGGCAGAAGTCTAGGAGGCGAAGCCAGAGCCTTCGACCACCCCGATGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 90 bp | AGCTCTTCTTGCTGCTTCCGCTCCTCACGAAGCCGCAGCCGTTCCTaGAGGCTCTGCTGCTGGCTCAGGGCCAGGGTAGCTGTCCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSCCFRSSRSRSRS*RLCCWLRARVAVPG Trigger: TCCCGGGACAGCTACCCTGGCCCTGAGCCAGCAGCAGAGCCTGCAGGAACGGCTGCGGCTTCGTGAGGAGCGGAAGCAGCAAGAAGAGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 90 bp | CCACAGATAGGCCCGGCCGCCCAGTGGCATCTCCACGCTGAACTGTaGCTCATCCTGCCCCATGCCCTCCCTCGCACGCCGGAAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PQIGPAAQWHLHAEL*LILPHALPRTPEED Trigger: ATCTTCTTCCGGCGTGCGAGGGAGGGCATGGGGCAGGATGAGGCACAGTTCAGCGTGGAGATGCCACTGGGCGGCCGGGCCTATCTGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 90 bp | CGCTTCTCCTCAGGCGTCTCGAAGGCCTTGAGCAGCTCTTCTTGCTaGTTCCGCTCCTCACGAAGCCGCAGCCGTTCCTGCAGGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RFSSGVSKALSSSSC*FRSSRSRSRSCRLC Trigger: GCAGAGCCTGCAGGAACGGCTGCGGCTTCGTGAGGAGCGGAAGCAGCAAGAAGAGCTGCTCAAGGCCTTCGAGACGCCTGAGGAGAAGCG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 90 bp | GCACGCTTCTCCTCAGGCGTCTCGAAGGCCTTGAGCAGCTCTTCTTaGTGCTTCCGCTCCTCACGAAGCCGCAGCCGTTCCTGCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ARFSSGVSKALSSSS*CFRSSRSRSRSCRL Trigger: GAGCCTGCAGGAACGGCTGCGGCTTCGTGAGGAGCGGAAGCAGCAAGAAGAGCTGCTCAAGGCCTTCGAGACGCCTGAGGAGAAGCGTGC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 90 bp | GAAGGTGTAGGGCTCGTGCATCTCCACCGCCAGGTCGTCATCCTCTaGGCTGATGTACTTGGCCAGGAGGTCGATGGGCTTAGCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EGVGLVHLHRQVVIL*ADVLGQEVDGLSSP Trigger: GGGCGAGCTAAGCCCATCGACCTCCTGGCCAAGTACATCAGCGCAGAGGATGACGACCTGGCGGTGGAGATGCACGAGCCCTACACCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS GCA 90 bp | GGGCCCCCGGCCCGGATCTTGCCCTCGATGCCCTGGAAGATGACCTaGAGCTGGTTGTACGTCTTTCCCTTGAACACCGACTGCACATCG | + |
|
Preference number: 5 (lower is better) Translates to: GPPARILPSMPWKMT*SWLYVFPLNTDCTS Trigger: CGATGTGCAGTCGGTGTTCAAGGGAAAGACGTACAACCAGCTGCAGGTCATCTTCCAGGGCATCGAGGGCAAGATCCGGGCCGGGGGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS GCA 90 bp | GGGCGGTCCCGCATGGAAGCGCAGAATGGCAAAGTCCCGGTTGTCTaGACAAGCCTCCAGGAAGTACTCAGGTGTGGCGCGCTTACGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GRSRMEAQNGKVPVV*TSLQEVLRCGALTD Trigger: ATCCGTAAGCGCGCCACACCTGAGTACTTCCTGGAGGCTTGTGCAGACAACCGGGACTTTGCCATTCTGCGCTTCCATGCGGGACCGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CCA 90 bp | ATGTCCAGGTTGGGGCCCCCGGCCCGGATCTTGCCCTCGATGCCCTaGAAGATGACCTGCAGCTGGTTGTACGTCTTTCCCTTGAACACC | + |
|
Preference number: 5 (lower is better) Translates to: MSRLGPPARILPSMP*KMTCSWLYVFPLNT Trigger: GGTGTTCAAGGGAAAGACGTACAACCAGCTGCAGGTCATCTTCCAGGGCATCGAGGGCAAGATCCGGGCCGGGGGCCCCAACCTGGACAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS CCA 90 bp | CCGGCCCGGATCTTGCCCTCGATGCCCTGGAAGATGACCTGCAGCTaGTTGTACGTCTTTCCCTTGAACACCGACTGCACATCGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PARILPSMPWKMTCS*LYVFPLNTDCTSEL Trigger: CAGCTCCGATGTGCAGTCGGTGTTCAAGGGAAAGACGTACAACCAGCTGCAGGTCATCTTCCAGGGCATCGAGGGCAAGATCCGGGCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS-3UTR CAA 90 bp | CACAGATTCCTACGGCTTCTGAAGGAGGCCTCCTGGTCCTCTTGGCCTTCCCACGAGCTGACTGAGGCATaGACTCCCTCACGGCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HRFLRLLKEASWSSWPSHELTEA*TPSRRS Trigger: TGAGCGCCGTGAGGGAGTCAATGCCTCAGTCAGCTC...GTGGGAAGGCCAAGAGGACCAGGAGGCCTCCTTCAGAAGCCGTAGGAATCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CAA 90 bp | AGATTCCTACGGCTTCTGAAGGAGGCCTCCTGGTCCTCTTGGCCTTCCCACCTGCCCGTGTGCACGCGGTaGAAGAAGCGAGGTTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RFLRLLKEASWSSWPSHLPVCTR*KKRGFR Trigger: GCGAAAACCTCGCTTCTTCAACCGCGTGCACACGGG...CAGGTGGGAAGGCCAAGAGGACCAGGAGGCCTCCTTCAGAAGCCGTAGGAATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CCA 90 bp | CCCTGCTCCTGCTTCAGCTTGAACAGCTTCTGTCTAAGAACATCTTaGTGGCGCTCACGGAGCCTGGCCCTGGCCATGTGTGCACGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PCSCFSLNSFCLRTS*WRSRSLALAMCARN Trigger: GTTGCGTGCACACATGGCCAGGGCCAGGCTCCGTGAGCGCCACCAAGATGTTCTTAGACAGAAGCTGTTCAAGCTGAAGCAGGAGCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS-3UTR CAA 90 bp | GTCCACAGATTCCTACGGCTTCTGAAGGAGGCCTCCTGGTCCTCTTGGCCTTCCGTGCCGAGCAGGTTGTaGTCTCCAAAGGGGTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VHRFLRLLKEASWSSWPSVPSRL*SPKGLS Trigger: CGACAACCCCTTTGGAGACAACAACCTGCTCGGCAC...GGAAGGCCAAGAGGACCAGGAGGCCTCCTTCAGAAGCCGTAGGAATCTGTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CAA 90 bp | CCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCGCCGAGGGCTCCGACTaGAGGATGGGGAACAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PVEQVHGNKTFLPPQAVFAEGSD*RMGNSG Trigger: GCCGCTGTTCCCCATCCTCAAGTCGGAGCCCTCGGC...GAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 90 bp | ATCTTGGAGCGAAGCTTGGCCTGCCGCAAGTGGAAGCTGTCCTCTTaGTCCTCCCACGTCTTAAAGTGTTCTGCCTCCTTCTCCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ILERSLACRKWKLSS*SSHVLKCSASFSRC Trigger: GCAGCGGGAGAAGGAGGCAGAACACTTTAAGACGTGGGAGGAGCAAGAGGACAGCTTCCACTTGCGGCAGGCCAAGCTTCGCTCCAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CCA 90 bp | TGCTCCTGCTTCAGCTTGAACAGCTTCTGTCTAAGAACATCTTGGTaGCGCTCACGGAGCCTGGCCCTGGCCATGTGTGCACGCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSCFSLNSFCLRTSW*RSRSLALAMCARNC Trigger: GCAGTTGCGTGCACACATGGCCAGGGCCAGGCTCCGTGAGCGCCACCAAGATGTTCTTAGACAGAAGCTGTTCAAGCTGAAGCAGGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS-3UTR CAA 90 bp | CACAGATTCCTACGGCTTCTGAAGGAGGCCTCCTGGTCCTCTTGGCCTTCCCACTCCAGCTTGCGGAGCTaGGCAATCTCATCCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HRFLRLLKEASWSSWPSHSSLRS*AISSSV Trigger: CACAGAGGATGAGATTGCCAAGCTCCGCAAGCTGGA...GTGGGAAGGCCAAGAGGACCAGGAGGCCTCCTTCAGAAGCCGTAGGAATCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS TCA 90 bp | GCGTCTGGTTATATTTGTTCCACTCGAAGCCCGTGTGCACGCGGTTaGAGAAGCGAGGTTTTCGCGGCCGGTACTTGTCGGCCCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ASGYICSTRSPCARG*RSEVFAAGTCRPTD Trigger: ATCTGTGGGCCGACAAGTACCGGCCGCGAAAACCTCGCTTCTTCAACCGCGTGCACACGGGCTTCGAGTGGAACAAATATAACCAGACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 90 bp | TTAGCTCGCCCATCTCGGATTCGGATCTTGGAGCGAAGCTTGGCCTaGCGCAAGTGGAAGCTGTCCTCTTGCTCCTCCCACGTCTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LARPSRIRILERSLA*RKWKLSSCSSHVLK Trigger: CTTTAAGACGTGGGAGGAGCAAGAGGACAGCTTCCACTTGCGGCAGGCCAAGCTTCGCTCCAAGATCCGAATCCGAGATGGGCGAGCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 90 bp | GACTTGAGGATGGGGAACAGCGGCTCGCTCTCCACACCCTGCTCCTaGTTCAGCTTGAACAGCTTCTGTCTAAGAACATCTTGGTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DLRMGNSGSLSTPCS*FSLNSFCLRTSWWR Trigger: GCGCCACCAAGATGTTCTTAGACAGAAGCTGTTCAAGCTGAAGCAGGAGCAGGGTGTGGAGAGCGAGCCGCTGTTCCCCATCCTCAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS GCA 90 bp | GGCTCCGACTTGAGGATGGGGAACAGCGGCTCGCTCTCCACACCCTaGTCCTGCTTCAGCTTGAACAGCTTCTGTCTAAGAACATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSDLRMGNSGSLSTP*SCFSLNSFCLRTSW Trigger: CCAAGATGTTCTTAGACAGAAGCTGTTCAAGCTGAAGCAGGAGCAGGGTGTGGAGAGCGAGCCGCTGTTCCCCATCCTCAAGTCGGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS GCA 90 bp | AGCTGGAAGATTCCATTGGCGAACTGGCAGCGGAAGCCATGGCGGTaGGAATACTCCCACTCACGACTGACGATCTTGAAGGCGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SWKIPLANWQRKPWR*EYSHSRLTILKAMS Trigger: GGACATCGCCTTCAAGATCGTCAGTCGTGAGTGGGAGTATTCGCACCGCCATGGCTTCCGCTGCCAGTTCGCCAATGGAATCTTCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CCA 90 bp | CCATCTCGGATTCGGATCTTGGAGCGAAGCTTGGCCTGCCGCAAGTaGAAGCTGTCCTCTTGCTCCTCCCACGTCTTAAAGTGTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSRIRILERSLACRK*KLSSCSSHVLKCSA Trigger: GGCAGAACACTTTAAGACGTGGGAGGAGCAAGAGGACAGCTTCCACTTGCGGCAGGCCAAGCTTCGCTCCAAGATCCGAATCCGAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CCA 90 bp | AACCAGAGCTGGAAGATTCCATTGGCGAACTGGCAGCGGAAGCCATaGCGGTGCGAATACTCCCACTCACGACTGACGATCTTGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: NQSWKIPLANWQRKP*RCEYSHSRLTILKA Trigger: CGCCTTCAAGATCGTCAGTCGTGAGTGGGAGTATTCGCACCGCCATGGCTTCCGCTGCCAGTTCGCCAATGGAATCTTCCAGCTCTGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCAGGACAGCCCCCGGCCCGGATCTaGCCCTCGATGCCCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FCHPKQSSQEQLKILSGQPPARI*PSMPWK Trigger: CTTCCAGGGCATCGAGGGCAAGATCCGGGCCGGGGG...CTGTCCTGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 90 bp | AAGATGACCTGCAGCTGGTTGTACGTCTTTCCCTTGAACACCGACTaGACATCGGAGCTGACTGAGGCATTGACTCCCTCACGGCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KMTCSWLYVFPLNTD*TSELTEALTPSRRS Trigger: TGAGCGCCGTGAGGGAGTCAATGCCTCAGTCAGCTCCGATGTGCAGTCGGTGTTCAAGGGAAAGACGTACAACCAGCTGCAGGTCATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS-3UTR CAA 90 bp | TCCCAAGAACAGTTAAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGGCCCAGAGGCCTCCAGCTaGCGGAGCTTGGCAATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQEQLKILSGQAGICQRGPEASS*RSLAIS Trigger: TGAGATTGCCAAGCTCCGCAAGCTGGAGGCCTCTGG...GCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTTAACTGTTCTTGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CAA 90 bp | CAGATTCCTACGGCTTCTGAAGGAGGCCTCCTGGTCCTCTTGGCCTTCCCACCTTTGTACGTCTTTCCCTaGAACACCGACTGCACATCG | + |
|
Preference number: 5 (lower is better) Translates to: QIPTASEGGLLVLLAFPPLYVFP*NTDCTS Trigger: CGATGTGCAGTCGGTGTTCAAGGGAAAGACGTACAA...AGGTGGGAAGGCCAAGAGGACCAGGAGGCCTCCTTCAGAAGCCGTAGGAATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAAGAACAGTTAAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGGCCTTGAGCAGCTCTTCTaGCTGCTTCCGCTCCTCACG | + |
|
Preference number: 5 (lower is better) Translates to: SQEQLKILSGQAGICQRGLEQLF*LLPLLT Trigger: CGTGAGGAGCGGAAGCAGCAAGAAGAGCTGCTCAAG...GCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTTAACTGTTCTTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CAA 90 bp | CCCCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCTTCCTGGATCCTCTaGTTGCGCTCCTTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRLNKSMETRPFCHPKQSSSWIL*LRSFSS Trigger: GGAGCTGAAGGAGCGCAACAAGAGGATCCAGGAAGA...AGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CAA 90 bp | ATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAACGCTCACCTGGGCCCTaGCCAGAGGCCTCCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: METRPFCHPKQSSQEQLKRSPGP*PEASSL Trigger: CAAGCTGGAGGCCTCTGGCAAGGGCCCAGGTGAGCG...TTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAAGAACAGTTAAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGGCATGGCAAAGTCCCGGTaGTCTGCACAAGCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQEQLKILSGQAGICQRGMAKSR*SAQASR Trigger: CCTGGAGGCTTGTGCAGACAACCGGGACTTTGCCAT...GCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTTAACTGTTCTTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CAA 90 bp | TCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAGGCGTCTCGAAGGCCTaGAGCAGCTCTTCTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SMETRPFCHPKQSSQEQLGVSKA*SSSSCC Trigger: GCAGCAAGAAGAGCTGCTCAAGGCCTTCGAGACGCC...TAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAAGAACAGTTAAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGGCAGCTGGAAGATTCCATaGGCGAACTGGCAGCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SQEQLKILSGQAGICQRGSWKIP*ANWQRK Trigger: CTTCCGCTGCCAGTTCGCCAATGGAATCTTCCAGCT...GCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTTAACTGTTCTTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS GCA 90 bp | TCTGTGATGGTCGTCATGTCCCGCCAGAAGTCCACATTCTTGCCCTaGTCTAGTTCCATGTACACCTGGATGTCTTCTAGTAGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVMVVMSRQKSTFLP*SSSMYTWMSSSRSS Trigger: GGAGGACCTACTAGAAGACATCCAGGTGTACATGGAACTAGAGCAGGGCAAGAATGTGGACTTCTGGCGGGACATGACGACCATCACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS-3UTR CAA 90 bp | CCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCTTCTTCTCCAAGGCCTaGTTCCAGATGAAGGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PVEQVHGNKTFLPPQAVFFFSKA*FQMKVP Trigger: CGGCACCTTCATCTGGAACAAGGCCTTGGAGAAGAA...GAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CAA 90 bp | CCCCGGTTGAACAAGTCCATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTATGACCTGCAGCTGGTaGTACGTCTTTCCCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PRLNKSMETRPFCHPKQSMTCSW*YVFPLN Trigger: GTTCAAGGGAAAGACGTACAACCAGCTGCAGGTCAT...AGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CAA 90 bp | AGAACAGTTAAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGGCTGCGGTGCGTCTGGTTATATTaGTTCCACTCGAAGCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RTVKNPFRTGRDLPEGLRCVWLY*FHSKPV Trigger: CACGGGCTTCGAGTGGAACAAATATAACCAGACGCA...CCGCAGCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTTAACTGTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CAA 90 bp | TCCCAAGAACAGTTAAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGGCATCTTCTCCCGCTTCTaGCGTTCCTTAGCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQEQLKILSGQAGICQRGIFSRF*RSLASF Trigger: GAAGGAAGCTAAGGAACGCAAGAAGCGGGAGAAGAT...GCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTTAACTGTTCTTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CAA 90 bp | AGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCATCTGCGCTGATGTACTaGGCCAGGAGGTCGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPFCHPKQSSQEQLKILSSALMY*ARRSMG Trigger: GCCCATCGACCTCCTGGCCAAGTACATCAGCGCAGA...TGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CAA 90 bp | TCTTCCCAAGAACAGTTAAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGTGGAAGCTGTCCTCTaGCTCCTCCCACGTCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSQEQLKILSGQAGICQRVEAVL*LLPRLK Trigger: TTTAAGACGTGGGAGGAGCAAGAGGACAGCTTCCAC...CCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTTAACTGTTCTTGGGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS-3UTR CAA 90 bp | TCCCAAGAACAGTTAAAAATCCTTTCAGGACAGGCAGGGATCTGCCAGAGGGGCTGCTCCTGCTTCAGCTaGAACAGCTTCTGTCTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SQEQLKILSGQAGICQRGCSCFS*NSFCLR Trigger: TCTTAGACAGAAGCTGTTCAAGCTGAAGCAGGAGCA...GCCCCTCTGGCAGATCCCTGCCTGTCCTGAAAGGATTTTTAACTGTTCTTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CAA 90 bp | ATGGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAATCCTGGATCCTCTTGTaGCGCTCCTTCAGCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: METRPFCHPKQSSQEQLKSWILL*RSFSSF Trigger: GAAGGAGCTGAAGGAGCGCAACAAGAGGATCCAGGA...TTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CAA 90 bp | AGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCCTTTCATGCAGCTCCAGACGGTaGTCTTCCTGGATCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RPFCHPKQSSQEQLKILSCSSRR*SSWILL Trigger: CAAGAGGATCCAGGAAGACAACCGTCTGGAGCTGCA...TGAAAGGATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS-3UTR CAA 90 bp | GGAAACAAGACCTTTCTGCCACCCCAAGCAGTCTTCCCAAGAACAGTTAAAAATCAGCTGTTTGACCTTTaGCAGCTCCAGACGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GNKTFLPPQAVFPRTVKNQLFDL*QLQTVV Trigger: GACAACCGTCTGGAGCTGCAAAAGGTCAAACAGCTG...ATTTTTAACTGTTCTTGGGAAGACTGCTTGGGGTGGCAGAAAGGTCTTGTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 72 bp | TCCGGCCCCGGCTTCGACTCCGCTGCTTCCGACCCCTaGGACCCACAGACCGTGAGCGCGAGCGAGAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SGPGFDSAASDP*DPQTVSASESP Trigger: GGGACTCTCGCTCGCGCTCACGGTCTGTGGGTCGCAGGGGTCGGAAGCAGCGGAGTCGAAGCCGGGGCCGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS GCA 72 bp | CTTCCGAATCTGACCTGCGCCCTCGGCTGCGCCGCTTaGGTTCGCGCCGCCGCTCGTGTTCCCGTCGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LPNLTCALGCAA*VRAAARVPVAF Trigger: GAAGGCGACGGGAACACGAGCGGCGGCGCGAACGCAAGCGGCGCAGCCGAGGGCGCAGGTCAGATTCGGAAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS GCA 72 bp | AGGCTCCAGCACGTGTGCGTCCAGAGGCAGCTCGTGTaGCGTGAGCAGCCGTGGGCTGTAGCGGCCGGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: RLQHVCVQRQLV*REQPWAVAAGV Trigger: GACGCCGGCCGCTACAGCCCACGGCTGCTCACGGCACACGAGCTGCCTCTGGACGCACACGTGCTGGAGCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CAA 72 bp | CCTTCCGAATCTGACCTGCGCCCTCGGCTGCGCCGCTaGCGTTCGCGCCGCCGCTCGTGTTCCCGTCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PSESDLRPRLRR*RSRRRSCSRRL Trigger: AAGGCGACGGGAACACGAGCGGCGGCGCGAACGCAAGCGGCGCAGCCGAGGGCGCAGGTCAGATTCGGAAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CAA 90 bp | GGTCGCTCCTCAGGTTCGGGGCTGTGGGCGGCCGAGGGCTCCGACTaGAGGATGGGGAACAGCGGCTCGCTCTCCACACCCTGCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GRSSGSGLWAAEGSD*RMGNSGSLSTPCSC Trigger: GCAGGAGCAGGGTGTGGAGAGCGAGCCGCTGTTCCCCATCCTCAAGTCGGAGCCCTCGGCCGCCCACAGCCCCGAACCTGAGGAGCGACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS TCA 72 bp | ACTCCGCTGCTTCCGACCCCTGCGACCCACAGACCGTaGGCGCGAGCGAGAGTCCCGACCCATTTGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TPLLPTPATHRP*ARARVPTHLAA Trigger: GGCCGCCAAATGGGTCGGGACTCTCGCTCGCGCTCACGGTCTGTGGGTCGCAGGGGTCGGAAGCAGCGGAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS TCA 72 bp | CAGGTTCGGGGCTGTGGGCGGCCGAGGGCTCCGACTTaGGGATGGGGAACAGCGGCTCGCTCTCCACACCCT | + |
|
Preference number: 6 (lower is better) Translates to: QVRGCGRPRAPT*GWGTAARSPHP Trigger: AGGGTGTGGAGAGCGAGCCGCTGTTCCCCATCCTCAAGTCGGAGCCCTCGGCCGCCCACAGCCCCGAACCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS GCA 72 bp | CAGGCGCTGCAGGTCCTCGTGAGGCTCCAGCACGTGTaGGTCCAGAGGCAGCTCGTGTGCCGTGAGCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: QALQVLVRLQHV*VQRQLVCREQP Trigger: CGGCTGCTCACGGCACACGAGCTGCCTCTGGACGCACACGTGCTGGAGCCTCACGAGGACCTGCAGCGCCTG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CCA 72 bp | TGCGTCCAGAGGCAGCTCGTGTGCCGTGAGCAGCCGTaGGCTGTAGCGGCCGGCGTCATAGTCCGCCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CVQRQLVCREQP*AVAAGVIVRQA Trigger: AGCCTGGCGGACTATGACGCCGGCCGCTACAGCCCACGGCTGCTCACGGCACACGAGCTGCCTCTGGACGCA 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CAA 72 bp | TCAGGTTCGGGGCTGTGGGCGGCCGAGGGCTCCGACTaGAGGATGGGGAACAGCGGCTCGCTCTCCACACCC | + |
|
Preference number: 6 (lower is better) Translates to: SGSGLWAAEGSD*RMGNSGSLSTP Trigger: GGGTGTGGAGAGCGAGCCGCTGTTCCCCATCCTCAAGTCGGAGCCCTCGGCCGCCCACAGCCCCGAACCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS TCA 72 bp | CCAGCACGTGTGCGTCCAGAGGCAGCTCGTGTGCCGTaGGCAGCCGTGGGCTGTAGCGGCCGGCGTCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: PARVRPEAARVP*AAVGCSGRRHS Trigger: ACTATGACGCCGGCCGCTACAGCCCACGGCTGCTCACGGCACACGAGCTGCCTCTGGACGCACACGTGCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS TCA 72 bp | TGCTGGCGAGACAGCTGCAGGCGCTGCAGGTCCTCGTaGGGCTCCAGCACGTGTGCGTCCAGAGGCAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: CWRDSCRRCRSS*GSSTCASRGSS Trigger: CGAGCTGCCTCTGGACGCACACGTGCTGGAGCCTCACGAGGACCTGCAGCGCCTGCAGCTGTCTCGCCAGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 72 bp | TCCTCACGAAGCCGCAGCCGTTCCTGCAGGCTCTGCTaGTGGCTCAGGGCCAGGGTAGCTGTCCCGGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: SSRSRSRSCRLC*WLRARVAVPGL Trigger: GAGTCCCGGGACAGCTACCCTGGCCCTGAGCCAGCAGCAGAGCCTGCAGGAACGGCTGCGGCTTCGTGAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CCA 72 bp | GCTGCAGCAGGCTCTCCCAATAGCCCATGTCCAGGTTaGGGCCCCCGGCCCGGATCTTGCCCTCGATGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: AAAGSPNSPCPG*GPRPGSCPRCP Trigger: AGGGCATCGAGGGCAAGATCCGGGCCGGGGGCCCCAACCTGGACATGGGCTATTGGGAGAGCCTGCTGCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS GCA 72 bp | TGCTGCTTCCGCTCCTCACGAAGCCGCAGCCGTTCCTaGAGGCTCTGCTGCTGGCTCAGGGCCAGGGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CCFRSSRSRSRS*RLCCWLRARVA Trigger: AGCTACCCTGGCCCTGAGCCAGCAGCAGAGCCTGCAGGAACGGCTGCGGCTTCGTGAGGAGCGGAAGCAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CCA 72 bp | GTACTTGTCGGCCCACAGATAGGCCCGGCCGCCCAGTaGCATCTCCACGCTGAACTGTGCCTCATCCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VLVGPQIGPAAQ*HLHAELCLILP Trigger: GGGCAGGATGAGGCACAGTTCAGCGTGGAGATGCCACTGGGCGGCCGGGCCTATCTGTGGGCCGACAAGTAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS GCA 72 bp | CGAAGGCTCTGGCTTCGCCTCCTAGACTTCTGCCGCTaGTCTCCTTCCGAATCTGACCTGCGCCCTCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRLWLRLLDFCR*SPSESDLRPRL Trigger: CAGCCGAGGGCGCAGGTCAGATTCGGAAGGAGAGCAGCGGCAGAAGTCTAGGAGGCGAAGCCAGAGCCTTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CCA 72 bp | TTGGGGCCCCCGGCCCGGATCTTGCCCTCGATGCCCTaGAAGATGACCTGCAGCTGGTTGTACGTCTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LGPPARILPSMP*KMTCSWLYVFP Trigger: GGGAAAGACGTACAACCAGCTGCAGGTCATCTTCCAGGGCATCGAGGGCAAGATCCGGGCCGGGGGCCCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS CAA 90 bp | CGCACGCTTCTCCTCAGGCGTCTCGAAGGCCTTGAGCAGCTCTTCTaGCTGCTTCCGCTCCTCACGAAGCCGCAGCCGTTCCTGCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTLLLRRLEGLEQLF*LLPLLTKPQPFLQA Trigger: AGCCTGCAGGAACGGCTGCGGCTTCGTGAGGAGCGGAAGCAGCAAGAAGAGCTGCTCAAGGCCTTCGAGACGCCTGAGGAGAAGCGTGCG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CAA 90 bp | CCCCAGCCCATCTTCTCCCGCTTCTTGCGTTCCTTAGCTTCCTTCTaGGCCAGTCGCCGCGCACGCTTCTCCTCAGGCGTCTCGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PQPIFSRFLRSLASF*ASRRARFSSGVSKA Trigger: GGCCTTCGAGACGCCTGAGGAGAAGCGTGCGCGGCGACTGGCCAAGAAGGAAGCTAAGGAACGCAAGAAGCGGGAGAAGATGGGCTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CAA 90 bp | CGGCGCTCACCTGGGCCCTTGCCAGAGGCCTCCAGCTTGCGGAGCTaGGCAATCTCATCCTCTGTGATGGTCGTCATGTCCCGCCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RRSPGPLPEASSLRS*AISSSVMVVMSRQK Trigger: CTTCTGGCGGGACATGACGACCATCACAGAGGATGAGATTGCCAAGCTCCGCAAGCTGGAGGCCTCTGGCAAGGGCCCAGGTGAGCGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS CAA 90 bp | GTCTTTCCCTTGAACACCGACTGCACATCGGAGCTGACTGAGGCATaGACTCCCTCACGGCGCTCACCTGGGCCCTTGCCAGAGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VFPLNTDCTSELTEA*TPSRRSPGPLPEAS Trigger: GGAGGCCTCTGGCAAGGGCCCAGGTGAGCGCCGTGAGGGAGTCAATGCCTCAGTCAGCTCCGATGTGCAGTCGGTGTTCAAGGGAAAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS TCA 72 bp | GCCGCGCACGCTTCTCCTCAGGCGTCTCGAAGGCCTTaGGCAGCTCTTCTTGCTGCTTCCGCTCCTCACGAA | + |
|
Preference number: 6 (lower is better) Translates to: AAHASPQASRRP*AALLAASAPHE Trigger: TTCGTGAGGAGCGGAAGCAGCAAGAAGAGCTGCTCAAGGCCTTCGAGACGCCTGAGGAGAAGCGTGCGCGGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 72 bp | GGTGGTCGAAGGCTCTGGCTTCGCCTCCTAGACTTCTaGCGCTGCTCTCCTTCCGAATCTGACCTGCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GGRRLWLRLLDF*RCSPSESDLRP Trigger: AGGGCGCAGGTCAGATTCGGAAGGAGAGCAGCGGCAGAAGTCTAGGAGGCGAAGCCAGAGCCTTCGACCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS GCA 72 bp | TCAGGCGTCTCGAAGGCCTTGAGCAGCTCTTCTTGCTaGTTCCGCTCCTCACGAAGCCGCAGCCGTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SGVSKALSSSSC*FRSSRSRSRSC Trigger: GCAGGAACGGCTGCGGCTTCGTGAGGAGCGGAAGCAGCAAGAAGAGCTGCTCAAGGCCTTCGAGACGCCTGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS GCA 72 bp | GGGCTCGTGCATCTCCACCGCCAGGTCGTCATCCTCTaGGCTGATGTACTTGGCCAGGAGGTCGATGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GLVHLHRQVVIL*ADVLGQEVDGL Trigger: AAGCCCATCGACCTCCTGGCCAAGTACATCAGCGCAGAGGATGACGACCTGGCGGTGGAGATGCACGAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS CAA 72 bp | CTCCTCAGGCGTCTCGAAGGCCTTGAGCAGCTCTTCTaGCTGCTTCCGCTCCTCACGAAGCCGCAGCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLRRLEGLEQLF*LLPLLTKPQPF Trigger: GAACGGCTGCGGCTTCGTGAGGAGCGGAAGCAGCAAGAAGAGCTGCTCAAGGCCTTCGAGACGCCTGAGGAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CAA 90 bp | TCGTGCATCTCCACCGCCAGGTCGTCATCCTCTGCGCTGATGTACTaGGCCAGGAGGTCGATGGGCTTAGCTCGCCCATCTCGGATTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SCISTARSSSSALMY*ARRSMGLARPSRIR Trigger: CCGAATCCGAGATGGGCGAGCTAAGCCCATCGACCTCCTGGCCAAGTACATCAGCGCAGAGGATGACGACCTGGCGGTGGAGATGCACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS CCA 72 bp | TGTCCTCGTAGGGCGGTCCCGCATGGAAGCGCAGAATaGCAAAGTCCCGGTTGTCTGCACAAGCCTCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: CPRRAVPHGSAE*QSPGCLHKPPG Trigger: TCCTGGAGGCTTGTGCAGACAACCGGGACTTTGCCATTCTGCGCTTCCATGCGGGACCGCCCTACGAGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CAA 72 bp | GCTCGCCCATCTCGGATTCGGATCTTGGAGCGAAGCTaGGCCTGCCGCAAGTGGAAGCTGTCCTCTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ARPSRIRILERS*ACRKWKLSSCS Trigger: GGAGCAAGAGGACAGCTTCCACTTGCGGCAGGCCAAGCTTCGCTCCAAGATCCGAATCCGAGATGGGCGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CAA 72 bp | TCCACCGCCAGGTCGTCATCCTCTGCGCTGATGTACTaGGCCAGGAGGTCGATGGGCTTAGCTCGCCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: STARSSSSALMY*ARRSMGLARPS Trigger: AGATGGGCGAGCTAAGCCCATCGACCTCCTGGCCAAGTACATCAGCGCAGAGGATGACGACCTGGCGGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS CAA 72 bp | TTGAACACCGACTGCACATCGGAGCTGACTGAGGCATaGACTCCCTCACGGCGCTCACCTGGGCCCTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LNTDCTSELTEA*TPSRRSPGPLP Trigger: TGGCAAGGGCCCAGGTGAGCGCCGTGAGGGAGTCAATGCCTCAGTCAGCTCCGATGTGCAGTCGGTGTTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS GCA 72 bp | CCATCTCGGATTCGGATCTTGGAGCGAAGCTTGGCCTaGCGCAAGTGGAAGCTGTCCTCTTGCTCCTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSRIRILERSLA*RKWKLSSCSSH Trigger: GTGGGAGGAGCAAGAGGACAGCTTCCACTTGCGGCAGGCCAAGCTTCGCTCCAAGATCCGAATCCGAGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS GCA 72 bp | CGCATGGAAGCGCAGAATGGCAAAGTCCCGGTTGTCTaGACAAGCCTCCAGGAAGTACTCAGGTGTGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: RMEAQNGKVPVV*TSLQEVLRCGA Trigger: CGCGCCACACCTGAGTACTTCCTGGAGGCTTGTGCAGACAACCGGGACTTTGCCATTCTGCGCTTCCATGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CCA 72 bp | CTCGCCCATCTCGGATTCGGATCTTGGAGCGAAGCTTaGCCTGCCGCAAGTGGAAGCTGTCCTCTTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LAHLGFGSWSEA*PAASGSCPLAP Trigger: AGGAGCAAGAGGACAGCTTCCACTTGCGGCAGGCCAAGCTTCGCTCCAAGATCCGAATCCGAGATGGGCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CAA 72 bp | ATCTTCTCCCGCTTCTTGCGTTCCTTAGCTTCCTTCTaGGCCAGTCGCCGCGCACGCTTCTCCTCAGGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: IFSRFLRSLASF*ASRRARFSSGV Trigger: GACGCCTGAGGAGAAGCGTGCGCGGCGACTGGCCAAGAAGGAAGCTAAGGAACGCAAGAAGCGGGAGAAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CAA 72 bp | TCGATGGGCTTAGCTCGCCCATCTCGGATTCGGATCTaGGAGCGAAGCTTGGCCTGCCGCAAGTGGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SMGLARPSRIRI*ERSLACRKWKL Trigger: CAGCTTCCACTTGCGGCAGGCCAAGCTTCGCTCCAAGATCCGAATCCGAGATGGGCGAGCTAAGCCCATCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CAA 90 bp | GATCTTGGAGCGAAGCTTGGCCTGCCGCAAGTGGAAGCTGTCCTCTaGCTCCTCCCACGTCTTAAAGTGTTCTGCCTCCTTCTCCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DLGAKLGLPQVEAVL*LLPRLKVFCLLLPL Trigger: CAGCGGGAGAAGGAGGCAGAACACTTTAAGACGTGGGAGGAGCAAGAGGACAGCTTCCACTTGCGGCAGGCCAAGCTTCGCTCCAAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CAA 90 bp | GCCCGGATCTTGCCCTCGATGCCCTGGAAGATGACCTGCAGCTGGTaGTACGTCTTTCCCTTGAACACCGACTGCACATCGGAGCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: ARILPSMPWKMTCSW*YVFPLNTDCTSELT Trigger: AGTCAGCTCCGATGTGCAGTCGGTGTTCAAGGGAAAGACGTACAACCAGCTGCAGGTCATCTTCCAGGGCATCGAGGGCAAGATCCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS CAA 90 bp | ATGGGGAACAGCGGCTCGCTCTCCACACCCTGCTCCTGCTTCAGCTaGAACAGCTTCTGTCTAAGAACATCTTGGTGGCGCTCACGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: MGNSGSLSTPCSCFS*NSFCLRTSWWRSRS Trigger: GCTCCGTGAGCGCCACCAAGATGTTCTTAGACAGAAGCTGTTCAAGCTGAAGCAGGAGCAGGGTGTGGAGAGCGAGCCGCTGTTCCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS GCA 72 bp | GCCCGGATCTTGCCCTCGATGCCCTGGAAGATGACCTaGAGCTGGTTGTACGTCTTTCCCTTGAACACCGAC | + |
|
Preference number: 6 (lower is better) Translates to: ARILPSMPWKMT*SWLYVFPLNTD Trigger: GTCGGTGTTCAAGGGAAAGACGTACAACCAGCTGCAGGTCATCTTCCAGGGCATCGAGGGCAAGATCCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS CAA 72 bp | TGCAGCTCCAGACGGTTGTCTTCCTGGATCCTCTTGTaGCGCTCCTTCAGCTCCTTCTCCTCCAGGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CSSRRLSSWILL*RSFSSFSSRWL Trigger: CAGCCACCTGGAGGAGAAGGAGCTGAAGGAGCGCAACAAGAGGATCCAGGAAGACAACCGTCTGGAGCTGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CAA 72 bp | GGTCCCGCATGGAAGCGCAGAATGGCAAAGTCCCGGTaGTCTGCACAAGCCTCCAGGAAGTACTCAGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GPAWKRRMAKSR*SAQASRKYSGV Trigger: CACACCTGAGTACTTCCTGGAGGCTTGTGCAGACAACCGGGACTTTGCCATTCTGCGCTTCCATGCGGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CAA 90 bp | TCCCGCTCTAGCCGCAGCTGTTTGACCTTTTGCAGCTCCAGACGGTaGTCTTCCTGGATCCTCTTGTTGCGCTCCTTCAGCTCCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRSSRSCLTFCSSRR*SSWILLLRSFSSFS Trigger: GGAGAAGGAGCTGAAGGAGCGCAACAAGAGGATCCAGGAAGACAACCGTCTGGAGCTGCAAAAGGTCAAACAGCTGCGGCTAGAGCGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CAA 90 bp | TGCGTCTGGTTATATTTGTTCCACTCGAAGCCCGTGTGCACGCGGTaGAAGAAGCGAGGTTTTCGCGGCCGGTACTTGTCGGCCCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: CVWLYLFHSKPVCTR*KKRGFRGRYLSAHR Trigger: TCTGTGGGCCGACAAGTACCGGCCGCGAAAACCTCGCTTCTTCAACCGCGTGCACACGGGCTTCGAGTGGAACAAATATAACCAGACGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS GCA 72 bp | TGCGTCTGGTTATATTTGTTCCACTCGAAGCCCGTGTaGACGCGGTTGAAGAAGCGAGGTTTTCGCGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: CVWLYLFHSKPV*TRLKKRGFRGR Trigger: CCGGCCGCGAAAACCTCGCTTCTTCAACCGCGTGCACACGGGCTTCGAGTGGAACAAATATAACCAGACGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CCA 72 bp | CGAGCAGGTTGTTGTCTCCAAAGGGGTTGTCGGTGTTaGTGTAGCCCATGTACTCCTCACCCCAGCCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: RAGCCLQRGCRC*CSPCTPHPSPS Trigger: AGATGGGCTGGGGTGAGGAGTACATGGGCTACACCAACACCGACAACCCCTTTGGAGACAACAACCTGCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CCA 72 bp | TGGAAGATTCCATTGGCGAACTGGCAGCGGAAGCCATaGCGGTGCGAATACTCCCACTCACGACTGACGATC | + |
|
Preference number: 6 (lower is better) Translates to: WKIPLANWQRKP*RCEYSHSRLTI Trigger: GATCGTCAGTCGTGAGTGGGAGTATTCGCACCGCCATGGCTTCCGCTGCCAGTTCGCCAATGGAATCTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CCA 72 bp | AAGTGGAACCAGAGCTGGAAGATTCCATTGGCGAACTaGCAGCGGAAGCCATGGCGGTGCGAATACTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: KWNQSWKIPLAN*QRKPWRCEYSH Trigger: GTGGGAGTATTCGCACCGCCATGGCTTCCGCTGCCAGTTCGCCAATGGAATCTTCCAGCTCTGGTTCCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CAA 72 bp | GCGAAGCTTGGCCTGCCGCAAGTGGAAGCTGTCCTCTaGCTCCTCCCACGTCTTAAAGTGTTCTGCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: AKLGLPQVEAVL*LLPRLKVFCLL Trigger: AAGGAGGCAGAACACTTTAAGACGTGGGAGGAGCAAGAGGACAGCTTCCACTTGCGGCAGGCCAAGCTTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CAA 90 bp | TCGATGCCCTGGAAGATGACCTGCAGCTGGTTGTACGTCTTTCCCTaGAACACCGACTGCACATCGGAGCTGACTGAGGCATTGACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SMPWKMTCSWLYVFP*NTDCTSELTEALTP Trigger: GGGAGTCAATGCCTCAGTCAGCTCCGATGTGCAGTCGGTGTTCAAGGGAAAGACGTACAACCAGCTGCAGGTCATCTTCCAGGGCATCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS TCA 72 bp | TATATTTGTTCCACTCGAAGCCCGTGTGCACGCGGTTaGAGAAGCGAGGTTTTCGCGGCCGGTACTTGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: YICSTRSPCARG*RSEVFAAGTCR Trigger: CCGACAAGTACCGGCCGCGAAAACCTCGCTTCTTCAACCGCGTGCACACGGGCTTCGAGTGGAACAAATATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS GCA 72 bp | TTGAGGATGGGGAACAGCGGCTCGCTCTCCACACCCTaGTCCTGCTTCAGCTTGAACAGCTTCTGTCTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRMGNSGSLSTP*SCFSLNSFCLR Trigger: TCTTAGACAGAAGCTGTTCAAGCTGAAGCAGGAGCAGGGTGTGGAGAGCGAGCCGCTGTTCCCCATCCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS GCA 72 bp | ATTCCATTGGCGAACTGGCAGCGGAAGCCATGGCGGTaGGAATACTCCCACTCACGACTGACGATCTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: IPLANWQRKPWR*EYSHSRLTILK Trigger: CTTCAAGATCGTCAGTCGTGAGTGGGAGTATTCGCACCGCCATGGCTTCCGCTGCCAGTTCGCCAATGGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CCA 72 bp | ATTCGGATCTTGGAGCGAAGCTTGGCCTGCCGCAAGTaGAAGCTGTCCTCTTGCTCCTCCCACGTCTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: IRILERSLACRK*KLSSCSSHVLK Trigger: CTTTAAGACGTGGGAGGAGCAAGAGGACAGCTTCCACTTGCGGCAGGCCAAGCTTCGCTCCAAGATCCGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CCA 72 bp | TTCAGCTTGAACAGCTTCTGTCTAAGAACATCTTGGTaGCGCTCACGGAGCCTGGCCCTGGCCATGTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: FSLNSFCLRTSW*RSRSLALAMCA Trigger: TGCACACATGGCCAGGGCCAGGCTCCGTGAGCGCCACCAAGATGTTCTTAGACAGAAGCTGTTCAAGCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS CCA 72 bp | TGCTTCAGCTTGAACAGCTTCTGTCTAAGAACATCTTaGTGGCGCTCACGGAGCCTGGCCCTGGCCATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CFSLNSFCLRTS*WRSRSLALAMC Trigger: ACACATGGCCAGGGCCAGGCTCCGTGAGCGCCACCAAGATGTTCTTAGACAGAAGCTGTTCAAGCTGAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS CAA 72 bp | TTTTGCAGCTCCAGACGGTTGTCTTCCTGGATCCTCTaGTTGCGCTCCTTCAGCTCCTTCTCCTCCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FCSSRRLSSWIL*LRSFSSFSSRW Trigger: CCACCTGGAGGAGAAGGAGCTGAAGGAGCGCAACAAGAGGATCCAGGAAGACAACCGTCTGGAGCTGCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CAA 72 bp | AGCCGCAGCTGTTTGACCTTTTGCAGCTCCAGACGGTaGTCTTCCTGGATCCTCTTGTTGCGCTCCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRSCLTFCSSRR*SSWILLLRSFS Trigger: GCTGAAGGAGCGCAACAAGAGGATCCAGGAAGACAACCGTCTGGAGCTGCAAAAGGTCAAACAGCTGCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
||
| CDS CAA 72 bp | TTGCCCTCGATGCCCTGGAAGATGACCTGCAGCTGGTaGTACGTCTTTCCCTTGAACACCGACTGCACATCG | + |
|
Preference number: 6 (lower is better) Translates to: LPSMPWKMTCSW*YVFPLNTDCTS Trigger: CGATGTGCAGTCGGTGTTCAAGGGAAAGACGTACAACCAGCTGCAGGTCATCTTCCAGGGCATCGAGGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS GCA 72 bp | TGCAGCTGGTTGTACGTCTTTCCCTTGAACACCGACTaGACATCGGAGCTGACTGAGGCATTGACTCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CSWLYVFPLNTD*TSELTEALTPS Trigger: TGAGGGAGTCAATGCCTCAGTCAGCTCCGATGTGCAGTCGGTGTTCAAGGGAAAGACGTACAACCAGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS GCA 72 bp | ATGGGGAACAGCGGCTCGCTCTCCACACCCTGCTCCTaGTTCAGCTTGAACAGCTTCTGTCTAAGAACATCT | + |
|
Preference number: 6 (lower is better) Translates to: MGNSGSLSTPCS*FSLNSFCLRTS Trigger: AGATGTTCTTAGACAGAAGCTGTTCAAGCTGAAGCAGGAGCAGGGTGTGGAGAGCGAGCCGCTGTTCCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
||
| CDS CCA 72 bp | ATCTTGCCCTCGATGCCCTGGAAGATGACCTGCAGCTaGTTGTACGTCTTTCCCTTGAACACCGACTGCACA | + |
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Preference number: 6 (lower is better) Translates to: ILPSMPWKMTCS*LYVFPLNTDCT Trigger: TGTGCAGTCGGTGTTCAAGGGAAAGACGTACAACCAGCTGCAGGTCATCTTCCAGGGCATCGAGGGCAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS CAA 72 bp | TGGAAGATGACCTGCAGCTGGTTGTACGTCTTTCCCTaGAACACCGACTGCACATCGGAGCTGACTGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: WKMTCSWLYVFP*NTDCTSELTEA Trigger: TGCCTCAGTCAGCTCCGATGTGCAGTCGGTGTTCAAGGGAAAGACGTACAACCAGCTGCAGGTCATCTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS CAA 72 bp | TTATATTTGTTCCACTCGAAGCCCGTGTGCACGCGGTaGAAGAAGCGAGGTTTTCGCGGCCGGTACTTGTCG | + |
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Preference number: 6 (lower is better) Translates to: LYLFHSKPVCTR*KKRGFRGRYLS Trigger: CGACAAGTACCGGCCGCGAAAACCTCGCTTCTTCAACCGCGTGCACACGGGCTTCGAGTGGAACAAATATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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| CDS CAA 72 bp | GTGATGGTCGTCATGTCCCGCCAGAAGTCCACATTCTaGCCCTGCTCTAGTTCCATGTACACCTGGATGTCT | + |
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Preference number: 6 (lower is better) Translates to: VMVVMSRQKSTF*PCSSSMYTWMS Trigger: AGACATCCAGGTGTACATGGAACTAGAGCAGGGCAAGAATGTGGACTTCTGGCGGGACATGACGACCATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS CAA 90 bp | TCATCCTCTGTGATGGTCGTCATGTCCCGCCAGAAGTCCACATTCTaGCCCTGCTCTAGTTCCATGTACACCTGGATGTCTTCTAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: SSSVMVVMSRQKSTF*PCSSSMYTWMSSSR Trigger: CCTACTAGAAGACATCCAGGTGTACATGGAACTAGAGCAGGGCAAGAATGTGGACTTCTGGCGGGACATGACGACCATCACAGAGGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS GCA 72 bp | GTCGTCATGTCCCGCCAGAAGTCCACATTCTTGCCCTaGTCTAGTTCCATGTACACCTGGATGTCTTCTAGT | + |
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Preference number: 6 (lower is better) Translates to: VVMSRQKSTFLP*SSSMYTWMSSS Trigger: ACTAGAAGACATCCAGGTGTACATGGAACTAGAGCAGGGCAAGAATGTGGACTTCTGGCGGGACATGACGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050867.8 ENSMUST00000218120.2 |
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| CDS CCA 72 bp | GAAGTACTCAGGTGTGGCGCGCTTACGGATGAGGTCTaGGTAGAAGATGTTGAATTTGTAGCCCTGCACAAT | + |
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Preference number: 6 (lower is better) Translates to: EVLRCGALTDEV*VEDVEFVALHN Trigger: ATTGTGCAGGGCTACAAATTCAACATCTTCTACCCAGACCTCATCCGTAAGCGCGCCACACCTGAGTACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050867.8 |
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