Pregenerated sensors for CACNG7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069806Ensembl transcript IDs: ENSMUST00000092891.6
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACCTAGGGGCTTCGGGTGAGCAGGTGGAGGGAGGAAAAGATAAATaGGAAGAGGAGGTGGGAGAGGGAAAGGCGGAGGAGGAGGAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: HLGASGEQVEGGKDK*EEEVGEGKAEEEEE Trigger: TTCCTCCTCCTCCTCCGCCTTTCCCTCTCCCACCTCCTCTTCCCATTTATCTTTTCCTCCCTCCACCTGCTCACCCGAAGCCCCTAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR CCA 90 bp | GAGGAAGGAATAATTTGGAAGTATAATGAATCAGTGAGGAGAGATTaGAAAAAGGGTGGAGCCGTTGAAATGAGGATGATGGGTAGGAAC | + |
|
Preference number: 1 (lower is better) Translates to: EEGIIWKYNESVRRD*KKGGAVEMRMMGRN Trigger: GTTCCTACCCATCATCCTCATTTCAACGGCTCCACCCTTTTTCCAATCTCTCCTCACTGATTCATTATACTTCCAAATTATTCCTTCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR-3UTR TCA 90 bp | TCCGTGTGTGTTAACACTGTGCTACCTCGCCCTCCTCCCCTAATAAAGGGAGTGTTGGGGCTTCATGGGTaGGGCGCGGGAGAGGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SVCVNTVLPRPPPLIKGVLGLHG*GAGEGR Trigger: CCTCCCCTCTCCCGCGCCTCACCCATGAAGCCCCAA...CACTCCCTTTATTAGGGGAGGAGGGCGAGGTAGCACAGTGTTAACACACACGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR-3UTR GCA 90 bp | TCCGTGTGTGTTAACACTGTGCTACCTCGCCCTCCTCCCCTAATAAAGGGAGTGGTTAACCCCCGCTACTaGCCCTCCCTCCCCCGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SVCVNTVLPRPPPLIKGVVNPRY*PSLPRR Trigger: CCTTCGGGGGAGGGAGGGGCAGTAGCGGGGGTTAAC...CACTCCCTTTATTAGGGGAGGAGGGCGAGGTAGCACAGTGTTAACACACACGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR CAA 90 bp | ACTCTCCAACCCAGCACCCCTACCGGAAGCGGGAGTCTGGCGGAGTaGGGGGAGCTAGGTGCAAGATACCACCAGAAGATAGTAAACTCG | + |
|
Preference number: 2 (lower is better) Translates to: TLQPSTPTGSGSLAE*GELGARYHQKIVNS Trigger: CGAGTTTACTATCTTCTGGTGGTATCTTGCACCTAGCTCCCCCAACTCCGCCAGACTCCCGCTTCCGGTAGGGGTGCTGGGTTGGAGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR-3UTR TCA 90 bp | TCCGTGTGTGTTAACACTGTGCTACCTCGCCCTCCTCCCCTAATAAAGGGAGTGGGAGTGGAGATAGCATaGGGGAACCTCCCTCCACCC | + |
|
Preference number: 2 (lower is better) Translates to: SVCVNTVLPRPPPLIKGVGVEIA*GNLPPP Trigger: GGGTGGAGGGAGGTTCCCTCATGCTATCTCCACTCC...CACTCCCTTTATTAGGGGAGGAGGGCGAGGTAGCACAGTGTTAACACACACGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGTTCCAGGGCATTCCAGTGGCTGCTACACCCACTCTCCAACCCAGCACCCAGTATAATGAATCAGTaGGGAGAGATTGGAAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GSSRAFQWLLHPLSNPAPSIMNQ*GEIGKR Trigger: CCTTTTTCCAATCTCTCCTCACTGATTCATTATACT...GGGTGCTGGGTTGGAGAGTGGGTGTAGCAGCCACTGGAATGCCCTGGAACTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR-3UTR TCA 90 bp | AAAGAGAGAAAATGGAGTCCCGGAAAGGCAACAGAAAGGTCATGGTCAGTCATACTCACGGGGGCGAGGTaGGGAAGGAATAATTTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: KERKWSPGKATERSWSVILTGAR*GRNNLE Trigger: TTCCAAATTATTCCTTCCTCACCTCGCCCCCGTGAG...TATGACTGACCATGACCTTTCTGTTGCCTTTCCGGGACTCCATTTTCTCTCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR-3UTR CCA 90 bp | AAAGAGAGAAAATGGAGTCCCGGAAAGGCAACAGAAAGGTCATGGTCAGTCATAGTAGGAACTTGGAGATaGCACAGCATCCTTCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: KERKWSPGKATERSWSVIVGTWR*HSILQP Trigger: AGGCTGAAGGATGCTGTGCCATCTCCAAGTTCCTAC...TATGACTGACCATGACCTTTCTGTTGCCTTTCCGGGACTCCATTTTCTCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR-3UTR CCA 90 bp | AAAGAGAGAAAATGGAGTCCCGGAAAGGCAACAGAAAGGTCATGGTCAGTCATATCAGTGAGGAGAGATTaGAAAAAGGGTGGAGCCGTT | + |
|
Preference number: 2 (lower is better) Translates to: KERKWSPGKATERSWSVISVRRD*KKGGAV Trigger: AACGGCTCCACCCTTTTTCCAATCTCTCCTCACTGA...TATGACTGACCATGACCTTTCTGTTGCCTTTCCGGGACTCCATTTTCTCTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR GCA 72 bp | CGCCGCCACCAGCGACCTGCAGGGCACCTGGTGGTGTaGAAAGAGAATGGAGCGGGAGTTCCAGGGCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: RRHQRPAGHLVV*KENGAGVPGHS Trigger: GGAATGCCCTGGAACTCCCGCTCCATTCTCTTTGCACACCACCAGGTGCCCTGCAGGTCGCTGGTGGCGGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR GCA 72 bp | GAGCAAGCTCATCCCCACCCGCCGCCACCAGCGACCTaGAGGGCACCTGGTGGTGTGCAAAGAGAATGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: EQAHPHPPPPAT*RAPGGVQREWS Trigger: GCTCCATTCTCTTTGCACACCACCAGGTGCCCTGCAGGTCGCTGGTGGCGGCGGGTGGGGATGAGCTTGCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR-3UTR CAA 90 bp | CACCCCGGGGCCGTTCTGGTTCCGTGTGTGTTAACACTGTGCTACCTCGCCCTCGGGGAGAACGGGCCCTaGAAAGAGGCCAGAGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: HPGAVLVPCVLTLCYLALGENGP*KEARVW Trigger: CCAAACTCTGGCCTCTTTCAAGGGCCCGTTCTCCCC...GAGGGCGAGGTAGCACAGTGTTAACACACACGGAACCAGAACGGCCCCGGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR GCA 72 bp | GAGAATGGAGCGGGAGTTCCAGGGCATTCCAGTGGCTaGTACACCCACTCTCCAACCCAGCACCCCTACCGG | + |
|
Preference number: 3 (lower is better) Translates to: ENGAGVPGHSSG*YTHSPTQHPYR Trigger: CCGGTAGGGGTGCTGGGTTGGAGAGTGGGTGTAGCAGCCACTGGAATGCCCTGGAACTCCCGCTCCATTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR CCA 72 bp | CACCCTGGGGTCCCATCCTTGTTTGGTGTGAGAGGCTaGATGCACCTAGGGGCTTCGGGTGAGCAGGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: HPGVPSLFGVRG*MHLGASGEQVE Trigger: CTCCACCTGCTCACCCGAAGCCCCTAGGTGCATCCAGCCTCTCACACCAAACAAGGATGGGACCCCAGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR CCA 72 bp | GCGACCTGCAGGGCACCTGGTGGTGTGCAAAGAGAATaGAGCGGGAGTTCCAGGGCATTCCAGTGGCTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: ATCRAPGGVQRE*SGSSRAFQWLL Trigger: TAGCAGCCACTGGAATGCCCTGGAACTCCCGCTCCATTCTCTTTGCACACCACCAGGTGCCCTGCAGGTCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR GCA 72 bp | CGGAAGCGGGAGTCTGGCGGAGTTGGGGGAGCTAGGTaGAAGATACCACCAGAAGATAGTAAACTCGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RKRESGGVGGAR*KIPPEDSKLGW Trigger: CCAACCGAGTTTACTATCTTCTGGTGGTATCTTGCACCTAGCTCCCCCAACTCCGCCAGACTCCCGCTTCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGCGGGAGTCTGGCGGAGTTGGGGGAGCTAGGTGCAAGATACCACCAGAAGATATCAGTGAGGAGAGATaGGAAAAAGGGTGGAGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: KRESGGVGGARCKIPPEDISEER*EKGWSR Trigger: ACGGCTCCACCCTTTTTCCAATCTCTCCTCACTGAT...ATCTTCTGGTGGTATCTTGCACCTAGCTCCCCCAACTCCGCCAGACTCCCGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAATACATTAGAAGAAAGACAGAAGGTCACCTTCCAGAGGAGAAAAGAGAGGGGAGTCTGGCGGAGTaGGGGGAGCTAGGTGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: EEYIRRKTEGHLPEEKREGSLAE*GELGAR Trigger: TCTTGCACCTAGCTCCCCCAACTCCGCCAGACTCCC...CTCTCTTTTCTCCTCTGGAAGGTGACCTTCTGTCTTTCTTCTAATGTATTCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR GCA 90 bp | CATATCCCTGTAGGCAGAGCAAGCTCATCCCCACCCGCCGCCACCAGCGACCTGAGATGTCGGAAGGGCTaGGGCCTCGACGCCACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HIPVGRASSSPPAATSDLRCRKG*GLDATP Trigger: AGGCGTGGCGTCGAGGCCGCAGCCCTTCCGACATCT...CAGGTCGCTGGTGGCGGCGGGTGGGGATGAGCTTGCTCTGCCTACAGGGATATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR TCA 90 bp | CACCCGCCGCCACCAGCGACCTGCAGGGCACCTGGTGGTGTGCAAAGAGAATGGGCAAGAATGGTCCTCTaGGGTCGGATGTGGCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: HPPPPATCRAPGGVQREWARMVL*GRMWPM Trigger: CATCGGCCACATCCGACCTCAGAGGACCATTCTTGC...CCATTCTCTTTGCACACCACCAGGTGCCCTGCAGGTCGCTGGTGGCGGCGGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR TCA 90 bp | TTCCAGTGGCTGCTACACCCACTCTCCAACCCAGCACCCCTACCGGAAGCGGGACGTGCAGCGCCATCTTaGCCTCGGTGGTCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FQWLLHPLSNPAPLPEAGRAAPS*PRWSGS Trigger: AGAACCAGACCACCGAGGTCAAGATGGCGCTGCACG...TCCCGCTTCCGGTAGGGGTGCTGGGTTGGAGAGTGGGTGTAGCAGCCACTGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR GCA 90 bp | GTGCTACCTCGCCCTCCTCCCCTAATAAAGGGAGTGGGATGGGCGGTTTTCTGGCTCCAGAGGCCAGCGTaGAGCGCCATCTTGACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VLPRPPPLIKGVGWAVFWLQRPA*SAILTS Trigger: CGAGGTCAAGATGGCGCTGCACGCTGGCCTCTGGAG...CCAGAAAACCGCCCATCCCACTCCCTTTATTAGGGGAGGAGGGCGAGGTAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| 3UTR CAA 72 bp | CCCAGCACCCCTACCGGAAGCGGGAGTCTGGCGGAGTaGGGGGAGCTAGGTGCAAGATACCACCAGAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: PSTPTGSGSLAE*GELGARYHQKI Trigger: TATCTTCTGGTGGTATCTTGCACCTAGCTCCCCCAACTCCGCCAGACTCCCGCTTCCGGTAGGGGTGCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR TCA 90 bp | CCACCAGCGACCTGCAGGGCACCTGGTGGTGTGCAAAGAGAATGGAGCGGGAGTTTTCCGTCACCAAGTTaGTCTCTGGTTCAAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPATCRAPGGVQREWSGSFPSPS*SLVQES Trigger: ACTTTCTTGAACCAGAGATCAACTTGGTGACGGAAA...ACTCCCGCTCCATTCTCTTTGCACACCACCAGGTGCCCTGCAGGTCGCTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR CCA 90 bp | TTTGAGGTGGGAAGAGGGACATGGATGAGAGGGAGTACCAGAAAATGGAAGACGTTGACCTCGGTGGTCTaGTTCTGCGGCAAAACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FEVGRGTWMRGSTRKWKTLTSVV*FCGKTV Trigger: GACCGTTTTGCCGCAGAACCAGACCACCGAGGTCAA...CGTCTTCCATTTTCTGGTACTCCCTCTCATCCATGTCCCTCTTCCCACCTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR TCA 90 bp | TGGAAGTATAATGAATCAGTGAGGAGAGATTGGAAAAAGGGTGGAGCCGTTGAAAGTCGGAGCAGTCGCTaGGACGCGGTCGGTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WKYNESVRRDWKKGGAVESRSSR*DAVGRR Trigger: CCTTCTACCGACCGCGTCTCAGCGACTGCTCCGACT...TTCAACGGCTCCACCCTTTTTCCAATCTCTCCTCACTGATTCATTATACTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR CCA 90 bp | AAAATGGAGTCCCGGAAAGGCAACAGAAAGGTCATGGTCAGTCATAGTCATATCGTGGAGATGTGGAGATaGTCCGGGTACTTGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KMESRKGNRKVMVSHSHIVEMWR*SGYLMA Trigger: GGCCATCAAGTACCCGGACCATCTCCACATCTCCAC...GATATGACTATGACTGACCATGACCTTTCTGTTGCCTTTCCGGGACTCCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR CCA 90 bp | AATGAATCAGTGAGGAGAGATTGGAAAAAGGGTGGAGCCGTTGAAATGAGGATGGGCGAAGTGGAGATGTaGAGATGGTCCGGGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NESVRRDWKKGGAVEMRMGEVEM*RWSGYL Trigger: CAAGTACCCGGACCATCTCCACATCTCCACTTCGCC...CATCCTCATTTCAACGGCTCCACCCTTTTTCCAATCTCTCCTCACTGATTCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR TCA 90 bp | TCCGTGTGTGTTAACACTGTGCTACCTCGCCCTCCTCCCCTAATAAAGGGAGTGAGAGACCTGATAAAATaGAAAAGATGCCAGAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: SVCVNTVLPRPPPLIKGVRDLIK*KRCQKR Trigger: TCGTTTCTGGCATCTTTTTCATTTTATCAGGTCTCT...CACTCCCTTTATTAGGGGAGGAGGGCGAGGTAGCACAGTGTTAACACACACGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR TCA 90 bp | GAAGAATACATTAGAAGAAAGACAGAAGGTCACCTTCCAGAGGAGAAAAGAGAGCTCCGGCCCCCTCTTTaGGAAGAAAAGAGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EEYIRRKTEGHLPEEKRELRPPL*EEKRKQ Trigger: CTGCTTCCTCTTTTCTTCTCAAAGAGGGGGCCGGAG...CTCTCTTTTCTCCTCTGGAAGGTGACCTTCTGTCTTTCTTCTAATGTATTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR CCA 90 bp | AATGAATCAGTGAGGAGAGATTGGAAAAAGGGTGGAGCCGTTGAAATGAGGATGCACCAAGTTGATCTCTaGTTCAAGAAAGTACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NESVRRDWKKGGAVEMRMHQVDL*FKKVLR Trigger: TCTGAGTACTTTCTTGAACCAGAGATCAACTTGGTG...CATCCTCATTTCAACGGCTCCACCCTTTTTCCAATCTCTCCTCACTGATTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS TCA 90 bp | ACGCCTCGGGCTGCAGAAACTGGCCGGAGTAGTCGGAGCAGTCGCTaGGACGCGGTCGGTAGAAGGCCGGGTGCGGGCGATACATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TPRAAETGRSSRSSR*DAVGRRPGAGDTSL Trigger: AAGAGATGTATCGCCCGCACCCGGCCTTCTACCGACCGCGTCTCAGCGACTGCTCCGACTACTCCGGCCAGTTTCTGCAGCCCGAGGCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS TCA 90 bp | CTGCAAAGAAGCAGACTCTCCAGAGGCCAGCGTGCAGCGCCATCTTaGCCTCGGTGGTCTGGTTCTGCGGCAAAACGGTCCCCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQRSRLSRGQRAAPS*PRWSGSAAKRSPPP Trigger: TGGAGGAGGGGACCGTTTTGCCGCAGAACCAGACCACCGAGGTCAAGATGGCGCTGCACGCTGGCCTCTGGAGAGTCTGCTTCTTTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS GCA 90 bp | CCCTTCTCCCGACCTGCAAAGAAGCAGACTCTCCAGAGGCCAGCGTaGAGCGCCATCTTGACCTCGGTGGTCTGGTTCTGCGGCAAAACG | + |
|
Preference number: 5 (lower is better) Translates to: PFSRPAKKQTLQRPA*SAILTSVVWFCGKT Trigger: CGTTTTGCCGCAGAACCAGACCACCGAGGTCAAGATGGCGCTGCACGCTGGCCTCTGGAGAGTCTGCTTCTTTGCAGGTCGGGAGAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR CAA 90 bp | AAGCGGGAGTCTGGCGGAGTTGGGGGAGCTAGGTGCAAGATACCACCAGAAGATGCGTGCAGCGCCATCTaGACCTCGGTGGTCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KRESGGVGGARCKIPPEDACSAI*TSVVWF Trigger: GAACCAGACCACCGAGGTCAAGATGGCGCTGCACGC...ATCTTCTGGTGGTATCTTGCACCTAGCTCCCCCAACTCCGCCAGACTCCCGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR CAA 90 bp | GTGCTACCTCGCCCTCCTCCCCTAATAAAGGGAGTGGGATGGGCGGTTTTCTGGCGGATGTGGCCGATGTaGCTGATGACAAAGGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLPRPPPLIKGVGWAVFWRMWPM*LMTKAV Trigger: CACCGCCTTTGTCATCAGCAACATCGGCCACATCCG...CCAGAAAACCGCCCATCCCACTCCCTTTATTAGGGGAGGAGGGCGAGGTAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS TCA 90 bp | TGCGCACTGTCTTCAGAATATTCTCCGTGTTTTCCGTCACCAAGTTaGTCTCTGGTTCAAGAAAGTACTCAGAAGCCACACAGCGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CALSSEYSPCFPSPS*SLVQESTQKPHSAP Trigger: AGGGGCGCTGTGTGGCTTCTGAGTACTTTCTTGAACCAGAGATCAACTTGGTGACGGAAAACACGGAGAATATTCTGAAGACAGTGCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS CCA 90 bp | TGTCTTCAGAATATTCTCCGTGTTTTCCGTCACCAAGTTGATCTCTaGTTCAAGAAAGTACTCAGAAGCCACACAGCGCCCCTTCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CLQNILRVFRHQVDL*FKKVLRSHTAPLLP Trigger: CGGGAGAAGGGGCGCTGTGTGGCTTCTGAGTACTTTCTTGAACCAGAGATCAACTTGGTGACGGAAAACACGGAGAATATTCTGAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR CAA 90 bp | TGGAAGTATAATGAATCAGTGAGGAGAGATTGGAAAAAGGGTGGAGCCGTTGAAACTCCGGCCCCCTCTTaGAGAAGAAAAGAGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WKYNESVRRDWKKGGAVETPAPS*RRKEEA Trigger: TGCTTCCTCTTTTCTTCTCAAAGAGGGGGCCGGAGT...TTCAACGGCTCCACCCTTTTTCCAATCTCTCCTCACTGATTCATTATACTTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR CAA 90 bp | TGGAAGTATAATGAATCAGTGAGGAGAGATTGGAAAAAGGGTGGAGCCGTTGAATTCATGACCTCGTCGTaGATGCTGGAGATGTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: WKYNESVRRDWKKGGAVEFMTSS*MLEMYR Trigger: CCTATACATCTCCAGCATCAACGACGAGGTCATGAA...TTCAACGGCTCCACCCTTTTTCCAATCTCTCCTCACTGATTCATTATACTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS-3UTR CAA 90 bp | GAAGAATACATTAGAAGAAAGACAGAAGGTCACCTTCCAGAGGAGAAAAGAGAGTTTTCCGTCACCAAGTaGATCTCTGGTTCAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EEYIRRKTEGHLPEEKREFSVTK*ISGSRK Trigger: CTTTCTTGAACCAGAGATCAACTTGGTGACGGAAAA...CTCTCTTTTCTCCTCTGGAAGGTGACCTTCTGTCTTTCTTCTAATGTATTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS TCA 72 bp | GCTGCAGAAACTGGCCGGAGTAGTCGGAGCAGTCGCTaGGACGCGGTCGGTAGAAGGCCGGGTGCGGGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: AAETGRSSRSSR*DAVGRRPGAGD Trigger: ATCGCCCGCACCCGGCCTTCTACCGACCGCGTCTCAGCGACTGCTCCGACTACTCCGGCCAGTTTCTGCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS CAA 90 bp | CCTGCAAAGAAGCAGACTCTCCAGAGGCCAGCGTGCAGCGCCATCTaGACCTCGGTGGTCTGGTTCTGCGGCAAAACGGTCCCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PAKKQTLQRPACSAI*TSVVWFCGKTVPSS Trigger: GGAGGAGGGGACCGTTTTGCCGCAGAACCAGACCACCGAGGTCAAGATGGCGCTGCACGCTGGCCTCTGGAGAGTCTGCTTCTTTGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS TCA 72 bp | AGCAGACTCTCCAGAGGCCAGCGTGCAGCGCCATCTTaGCCTCGGTGGTCTGGTTCTGCGGCAAAACGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRLSRGQRAAPS*PRWSGSAAKRS Trigger: GGACCGTTTTGCCGCAGAACCAGACCACCGAGGTCAAGATGGCGCTGCACGCTGGCCTCTGGAGAGTCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS GCA 72 bp | GCGTGCAGCGCCATCTTGACCTCGGTGGTCTGGTTCTaGGGCAAAACGGTCCCCTCCTCCATGTACAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ACSAILTSVVWF*GKTVPSSMYSQ Trigger: CTGGCTGTACATGGAGGAGGGGACCGTTTTGCCGCAGAACCAGACCACCGAGGTCAAGATGGCGCTGCACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS CCA 72 bp | AGGCCAGCGTGCAGCGCCATCTTGACCTCGGTGGTCTaGTTCTGCGGCAAAACGGTCCCCTCCTCCATGTAC | + |
|
Preference number: 6 (lower is better) Translates to: RPACSAILTSVV*FCGKTVPSSMY Trigger: GTACATGGAGGAGGGGACCGTTTTGCCGCAGAACCAGACCACCGAGGTCAAGATGGCGCTGCACGCTGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS GCA 72 bp | CGACCTGCAAAGAAGCAGACTCTCCAGAGGCCAGCGTaGAGCGCCATCTTGACCTCGGTGGTCTGGTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RPAKKQTLQRPA*SAILTSVVWFC Trigger: GCAGAACCAGACCACCGAGGTCAAGATGGCGCTGCACGCTGGCCTCTGGAGAGTCTGCTTCTTTGCAGGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS CAA 90 bp | GTGCGCACTGTCTTCAGAATATTCTCCGTGTTTTCCGTCACCAAGTaGATCTCTGGTTCAAGAAAGTACTCAGAAGCCACACAGCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: VRTVFRIFSVFSVTK*ISGSRKYSEATQRP Trigger: GGGGCGCTGTGTGGCTTCTGAGTACTTTCTTGAACCAGAGATCAACTTGGTGACGGAAAACACGGAGAATATTCTGAAGACAGTGCGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS CCA 72 bp | AATATTCTCCGTGTTTTCCGTCACCAAGTTGATCTCTaGTTCAAGAAAGTACTCAGAAGCCACACAGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: NILRVFRHQVDL*FKKVLRSHTAP Trigger: GGGCGCTGTGTGGCTTCTGAGTACTTTCTTGAACCAGAGATCAACTTGGTGACGGAAAACACGGAGAATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS TCA 72 bp | TCTTCAGAATATTCTCCGTGTTTTCCGTCACCAAGTTaGTCTCTGGTTCAAGAAAGTACTCAGAAGCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: SSEYSPCFPSPS*SLVQESTQKPH Trigger: GTGTGGCTTCTGAGTACTTTCTTGAACCAGAGATCAACTTGGTGACGGAAAACACGGAGAATATTCTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||
| CDS CAA 72 bp | GTCTTCAGAATATTCTCCGTGTTTTCCGTCACCAAGTaGATCTCTGGTTCAAGAAAGTACTCAGAAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: VFRIFSVFSVTK*ISGSRKYSEAT Trigger: TGTGGCTTCTGAGTACTTTCTTGAACCAGAGATCAACTTGGTGACGGAAAACACGGAGAATATTCTGAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092891.6 |
||