Pregenerated sensors for CACNG6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078815Ensembl transcript IDs: ENSMUST00000108647.3, ENSMUST00000183200.8
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCTCTTCCCTGTCCCACCAGGCAGTCGTAGGACATCTCTCCCTTaGGTGAGTCAGTATAGACTTGGACAAAGAAAGCTCCCCAGTCCT | + |
|
Preference number: 1 (lower is better) Translates to: GLFPVPPGSRRTSLP*VSQYRLGQRKLPSP Trigger: AGGACTGGGGAGCTTTCTTTGTCCAAGTCTATACTGACTCACTCAAGGGAGAGATGTCCTACGACTGCCTGGTGGGACAGGGAAGAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| 3UTR GCA 90 bp | CTGCTGTACTGGCTTTTAAAGTGGGTTCTGGGGATTCAAACTCCATaGCCTCAAGCTTGCTCAGCAAGCACTTTACTCACTAAGCCATTC | + |
|
Preference number: 1 (lower is better) Translates to: LLYWLLKWVLGIQTP*PQACSASTLLTKPF Trigger: GAATGGCTTAGTGAGTAAAGTGCTTGCTGAGCAAGCTTGAGGGCATGGAGTTTGAATCCCCAGAACCCACTTTAAAAGCCAGTACAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| 3UTR CCA 90 bp | TCTCTGCCTTCACAACATTGGAATTACAGACATGTGCTGCTGTACTaGCTTTTAAAGTGGGTTCTGGGGATTCAAACTCCATGCCCTCAA | + |
|
Preference number: 1 (lower is better) Translates to: SLPSQHWNYRHVLLY*LLKWVLGIQTPCPQ Trigger: TTGAGGGCATGGAGTTTGAATCCCCAGAACCCACTTTAAAAGCCAGTACAGCAGCACATGTCTGTAATTCCAATGTTGTGAAGGCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCAGTATAGACTTGGACAAAGAAAGCTCCCCAGTCCTTCCAGGACCTCAGGACGAGAAAGCTGGAAACTaGGACAGGGTTGGCAGATGT | + |
|
Preference number: 2 (lower is better) Translates to: VSIDLDKESSPVLPGPQDEKAGN*DRVGRC Trigger: ACATCTGCCAACCCTGTCTCAGTTTCCAGCTTTCTC...GTCCTGAGGTCCTGGAAGGACTGGGGAGCTTTCTTTGTCCAAGTCTATACTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTAATCTCTGCCTTCACAACATTGGAATTACAGACATGTGCTGCTGTACTGGCGGGATTCAAACTCCATaGCCTCAAGCTTGCTCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SNLCLHNIGITDMCCCTGGIQTP*PQACSA Trigger: TGCTGAGCAAGCTTGAGGGCATGGAGTTTGAATCCC...GCCAGTACAGCAGCACATGTCTGTAATTCCAATGTTGTGAAGGCAGAGATTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTCAGTATAGACTTGGACAAAGAAAGCTCCCCAGTCCTTCCAGGACCTCAGGAGGTTCCTCTAATCTCTaGCTTCACAACATTGGAATT | + |
|
Preference number: 2 (lower is better) Translates to: SQYRLGQRKLPSPSRTSGGSSNL*LHNIGI Trigger: AATTCCAATGTTGTGAAGGCAGAGATTAGAGGAACC...TCCTGAGGTCCTGGAAGGACTGGGGAGCTTTCTTTGTCCAAGTCTATACTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGTTTCCCCACGGATCCCCATTTGCATATAACCTCTTCCCATCCTACCTCATACTGGCTTTTAAAGTaGGTTCTGGGGATTCAAACT | + |
|
Preference number: 2 (lower is better) Translates to: RSFPTDPHLHITSSHPTSYWLLK*VLGIQT Trigger: AGTTTGAATCCCCAGAACCCACTTTAAAAGCCAGTA...TGAGGTAGGATGGGAAGAGGTTATATGCAAATGGGGATCCGTGGGGAAACTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| 3UTR-3UTR TCA 90 bp | GATCCCCATTTGCATATAACCTCTTCCCATCCTACCTCAAGCAACCCAAAATCAAGAGATGAAAACTCTTaGGGAGAAAGCTGGAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: DPHLHITSSHPTSSNPKSRDENS*GESWKL Trigger: CAGTTTCCAGCTTTCTCCTCAAGAGTTTTCATCTCT...TGATTTTGGGTTGCTTGAGGTAGGATGGGAAGAGGTTATATGCAAATGGGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGGTTCAGAGTTTAGCATCTTCCTTTGTTGCTTCTGCCTTAGTTCTTAAGGGGTCTCTAGAAGAGAGATaGAAACTCTTGAGGAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: GVQSLASSFVASALVLKGSLEER*KLLRRK Trigger: CTTTCTCCTCAAGAGTTTTCATCTCTCTTCTAGAGA...CCCCTTAAGAACTAAGGCAGAAGCAACAAAGGAAGATGCTAAACTCTGAACCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGGGAAAAACAATTTCTCTAGAAGAGAGATGAAAACTCTTGAGGAGAAAGCTAAACTGAGACAGGGTTaGCAGATGTCTTCAGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: SGKNNFSRREMKTLEEKAKLRQG*QMSSES Trigger: GCTTTCTGAAGACATCTGCCAACCCTGTCTCAGTTT...AGCTTTCTCCTCAAGAGTTTTCATCTCTCTTCTAGAGAAATTGTTTTTCCCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| 3UTR GCA 72 bp | TGGGTTCTGGGGATTCAAACTCCATGCCCTCAAGCTTaGTCAGCAAGCACTTTACTCACTAAGCCATTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: WVLGIQTPCPQA*SASTLLTKPFP Trigger: GGGGAATGGCTTAGTGAGTAAAGTGCTTGCTGAGCAAGCTTGAGGGCATGGAGTTTGAATCCCCAGAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGTATAGACTTGGACAAAGAAAGCTCCCCAGTCCTTCCAGGACCTCAGGACGAAACTGAGACAGGGTaGGCAGATGTCTTCAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VSIDLDKESSPVLPGPQDETETG*ADVFRK Trigger: CTTTCTGAAGACATCTGCCAACCCTGTCTCAGTTTC...GTCCTGAGGTCCTGGAAGGACTGGGGAGCTTTCTTTGTCCAAGTCTATACTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| 3UTR GCA 72 bp | TGGCTTTTAAAGTGGGTTCTGGGGATTCAAACTCCATaGCCTCAAGCTTGCTCAGCAAGCACTTTACTCACT | + |
|
Preference number: 3 (lower is better) Translates to: WLLKWVLGIQTP*PQACSASTLLT Trigger: AGTGAGTAAAGTGCTTGCTGAGCAAGCTTGAGGGCATGGAGTTTGAATCCCCAGAACCCACTTTAAAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTTCACAACATTGGAATTACAGACATGTGCTGCTGTACTGGCTTTTAAAGTCCATGCCCTCAAGCTaGCTCAGCAAGCACTTTACT | + |
|
Preference number: 3 (lower is better) Translates to: LPSQHWNYRHVLLYWLLKSMPSS*LSKHFT Trigger: AGTAAAGTGCTTGCTGAGCAAGCTTGAGGGCATGGA...CTTTAAAAGCCAGTACAGCAGCACATGTCTGTAATTCCAATGTTGTGAAGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| 3UTR CCA 72 bp | TCACAACATTGGAATTACAGACATGTGCTGCTGTACTaGCTTTTAAAGTGGGTTCTGGGGATTCAAACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SQHWNYRHVLLY*LLKWVLGIQTP Trigger: TGGAGTTTGAATCCCCAGAACCCACTTTAAAAGCCAGTACAGCAGCACATGTCTGTAATTCCAATGTTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGTCAGATGACAGTGAAGTCGGACCAGGGCTCTTCCCTGTCCCACCAGGCAGGCAGCCCAAGGCCATaGCCGTCAGGCCCAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PSQMTVKSDQGSSLSHQAGSPRP*PSGPAQ Trigger: CTGTGCTGGGCCTGACGGCCATGGCCTTGGGCTGCC...TGCCTGGTGGGACAGGGAAGAGCCCTGGTCCGACTTCACTGTCATCTGACTTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR TCA 90 bp | CCTCAGGACCTAGCCCTCTCACCAGCTAACACTCCCTCAGTCCCAGAAGTTTCCCCACTTGGGGCACAGTaGCCTCCAGGGCCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQDLALSPANTPSVPEVSPLGAQ*PPGPGR Trigger: CCTTCCTGGCCCTGGAGGTCACTGTGCCCCAAGTGG...GGAAACTTCTGGGACTGAGGGAGTGTTAGCTGGTGAGAGGGCTAGGTCCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGACCTAGCCCTCTCACCAGCTAACACTCCCTCAGTCCCAGAAGTTTCCTTGGGCCACCCCACTTaGGGCACAGTGACCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQDLALSPANTPSVPEVSLGHPT*GTVTSR Trigger: CCTGGAGGTCACTGTGCCCCAAGTGGGGTGGCCCAA...GGAAACTTCTGGGACTGAGGGAGTGTTAGCTGGTGAGAGGGCTAGGTCCTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR TCA 90 bp | TTGAGGAGAAAGCTGGAAACTGAGACAGGGTTGGCAGATGTCTTCAGAAAGCAGGAGGGGTCTCAGGGTTaGCTCCCTGCAGCAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRRKLETETGLADVFRKQEGSQG*LPAAGL Trigger: GAGCCCTGCTGCAGGGAGTCAACCCTGAGACCCCTC...CTGCTTTCTGAAGACATCTGCCAACCCTGTCTCAGTTTCCAGCTTTCTCCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGGTTCTGGGGATTCAAACTCCATGCCCTCAAGCTTGCTCAGCAAGCACTTAGGGCTCCTACGGAATaGCGGAACACCTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGFWGFKLHALKLAQQALRAPTE*RNTSRL Trigger: CAGCCTGGAGGTGTTCCGGCATTCCGTAGGAGCCCT...AAGTGCTTGCTGAGCAAGCTTGAGGGCATGGAGTTTGAATCCCCAGAACCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR TCA 90 bp | CACCCCCAAAAGCATTATTTACAGGGAGAAGATGAGGGAGGGACCAAGACATTTCCACTTGGGGCACAGTaGCCTCCAGGGCCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPQKHYLQGEDEGGTKTFPLGAQ*PPGPGR Trigger: CCTTCCTGGCCCTGGAGGTCACTGTGCCCCAAGTGG...AAATGTCTTGGTCCCTCCCTCATCTTCTCCCTGTAAATAATGCTTTTGGGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGGAGAAAGCTGGAAACTGAGACAGGGTTGGCAGATGTCTTCAGAAAGCAGCCACCCAGAACTCGGTaGCCACAGCCAGCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRRKLETETGLADVFRKQPPRTR*PQPAQP Trigger: TGGCTGTGCTGGCTGTGGGCACCGAGTTCTGGGTGG...CTGCTTTCTGAAGACATCTGCCAACCCTGTCTCAGTTTCCAGCTTTCTCCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR CCA 90 bp | CACCCCCAAAAGCATTATTTACAGGGAGAAGATGAGGGAGGGACCAAGACATTTTCCTGGCAGCTCAGCTaGGCCACAGGTCTCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HPQKHYLQGEDEGGTKTFSWQLS*ATGLPA Trigger: GGCAGGGAGACCTGTGGCCCAGCTGAGCTGCCAGGA...AAATGTCTTGGTCCCTCCCTCATCTTCTCCCTGTAAATAATGCTTTTGGGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGGAGAAAGCTGGAAACTGAGACAGGGTTGGCAGATGTCTTCAGAAAGCAGTTGGGCCACCCCACTTaGGGCACAGTGACCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRRKLETETGLADVFRKQLGHPT*GTVTSR Trigger: CCTGGAGGTCACTGTGCCCCAAGTGGGGTGGCCCAA...CTGCTTTCTGAAGACATCTGCCAACCCTGTCTCAGTTTCCAGCTTTCTCCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGTTTCCCCACGGATCCCCATTTGCATATAACCTCTTCCCATCCTACCTCACCTGCCACAGTCGCTTaGTGCACACCTTCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSFPTDPHLHITSSHPTSPATVA*CTPSTA Trigger: GGCTGTGGAAGGTGTGCATCAAGCGACTGTGGCAGG...TGAGGTAGGATGGGAAGAGGTTATATGCAAATGGGGATCCGTGGGGAAACTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR GCA 90 bp | CCTCAGGACCTAGCCCTCTCACCAGCTAACACTCCCTCAGTCCCAGAAGTTTCCCGTCGGTCTTCCTCTTaGATGAAGAAGTTAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PQDLALSPANTPSVPEVSRRSSS*MKKLDH Trigger: GTGGTCTAACTTCTTCATGCAAGAGGAAGACCGACG...GGAAACTTCTGGGACTGAGGGAGTGTTAGCTGGTGAGAGGGCTAGGTCCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR GCA 90 bp | AGTCAGTATAGACTTGGACAAAGAAAGCTCCCCAGTCCTTCCAGGACCTCAGGACGTAGCACCCACGATTaGCACCAGCAACCCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQYRLGQRKLPSPSRTSGRSTHD*HQQPQL Trigger: AAGCTGGGGTTGCTGGTGGCAATCGTGGGTGCTACG...TCCTGAGGTCCTGGAAGGACTGGGGAGCTTTCTTTGTCCAAGTCTATACTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGGAGAAAGCTGGAAACTGAGACAGGGTTGGCAGATGTCTTCAGAAAGCAGAGGGCTCCTACGGAATaGCGGAACACCTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRRKLETETGLADVFRKQRAPTE*RNTSRL Trigger: CAGCCTGGAGGTGTTCCGGCATTCCGTAGGAGCCCT...CTGCTTTCTGAAGACATCTGCCAACCCTGTCTCAGTTTCCAGCTTTCTCCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR GCA 90 bp | TATAGACTTGGACAAAGAAAGCTCCCCAGTCCTTCCAGGACCTCAGGACCTAGCGAAGTAGGTGCAGTTTaGTTCTCCTGGCAGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YRLGQRKLPSPSRTSGPSEVGAV*FSWQLS Trigger: GCTGAGCTGCCAGGAGAAGCAAACTGCACCTACTTC...GCTAGGTCCTGAGGTCCTGGAAGGACTGGGGAGCTTTCTTTGTCCAAGTCTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR GCA 90 bp | AGTCAGTATAGACTTGGACAAAGAAAGCTCCCCAGTCCTTCCAGGACCTCAGGATCGGAGCAGGGACTCTaGACCTTTACTGAGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQYRLGQRKLPSPSRTSGSEQGL*TFTEHH Trigger: ATGGTGCTCAGTAAAGGTGCAGAGTCCCTGCTCCGA...TCCTGAGGTCCTGGAAGGACTGGGGAGCTTTCTTTGTCCAAGTCTATACTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| 3UTR CAA 72 bp | TCCCTCAGTCCCAGAAGTTTCCCCACGGATCCCCATTaGCATATAACCTCTTCCCATCCTACCTCAAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLSPRSFPTDPH*HITSSHPTSSN Trigger: GTTGCTTGAGGTAGGATGGGAAGAGGTTATATGCAAATGGGGATCCGTGGGGAAACTTCTGGGACTGAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCTTCACAACATTGGAATTACAGACATGTGCTGCTGTACTGGCTTTTAAAGGCAGTTTGCTTCTCCTaGCAGCTCAGCTGGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LPSQHWNYRHVLLYWLLKAVCFS*QLSWAT Trigger: TGTGGCCCAGCTGAGCTGCCAGGAGAAGCAAACTGC...CTTTAAAAGCCAGTACAGCAGCACATGTCTGTAATTCCAATGTTGTGAAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAAAACAATTTCTCTAGAAGAGAGATGAAAACTCTTGAGGAGAAAGCTGGACTCATAGGCCAGGCGTaGAGCTGGAGGGGTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKNNFSRREMKTLEEKAGLIGQA*SWRGLR Trigger: CCTGAGACCCCTCCAGCTCCACGCCTGGCCTATGAG...TCCAGCTTTCTCCTCAAGAGTTTTCATCTCTCTTCTAGAGAAATTGTTTTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAAAACAATTTCTCTAGAAGAGAGATGAAAACTCTTGAGGAGAAAGCTGGACCTGCCACAGTCGCTTaGTGCACACCTTCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKNNFSRREMKTLEEKAGPATVA*CTPSTA Trigger: GGCTGTGGAAGGTGTGCATCAAGCGACTGTGGCAGG...TCCAGCTTTCTCCTCAAGAGTTTTCATCTCTCTTCTAGAGAAATTGTTTTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGGAGAAAGCTGGAAACTGAGACAGGGTTGGCAGATGTCTTCAGAAAGCAGCGTCGGTCTTCCTCTTaGATGAAGAAGTTAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRRKLETETGLADVFRKQRRSSS*MKKLDH Trigger: GTGGTCTAACTTCTTCATGCAAGAGGAAGACCGACG...CTGCTTTCTGAAGACATCTGCCAACCCTGTCTCAGTTTCCAGCTTTCTCCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACAATTTCTCTAGAAGAGAGATGAAAACTCTTGAGGAGAAAGCTGGAAACTCCTGGCAGCTCAGCTaGGCCACAGGTCTCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KNNFSRREMKTLEEKAGNSWQLS*ATGLPA Trigger: GGCAGGGAGACCTGTGGCCCAGCTGAGCTGCCAGGA...GTTTCCAGCTTTCTCCTCAAGAGTTTTCATCTCTCTTCTAGAGAAATTGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR TCA 90 bp | CACCCCCAAAAGCATTATTTACAGGGAGAAGATGAGGGAGGGACCAAGACATTTTGGTCTTGTATGTATTaGGTTCCACCCAGAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HPQKHYLQGEDEGGTKTFWSCMY*VPPRTR Trigger: CCGAGTTCTGGGTGGAACTCAATACATACAAGACCA...AAATGTCTTGGTCCCTCCCTCATCTTCTCCCTGTAAATAATGCTTTTGGGGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAAAACAATTTCTCTAGAAGAGAGATGAAAACTCTTGAGGAGAAAGCTGGACGTAGCACCCACGATTaGCACCAGCAACCCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GKNNFSRREMKTLEEKAGRSTHD*HQQPQL Trigger: AAGCTGGGGTTGCTGGTGGCAATCGTGGGTGCTACG...TCCAGCTTTCTCCTCAAGAGTTTTCATCTCTCTTCTAGAGAAATTGTTTTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR TCA 90 bp | GATCCCCATTTGCATATAACCTCTTCCCATCCTACCTCAAGCAACCCAAAATCATGGTCTTGTATGTATTaGGTTCCACCCAGAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DPHLHITSSHPTSSNPKSWSCMY*VPPRTR Trigger: CCGAGTTCTGGGTGGAACTCAATACATACAAGACCA...TGATTTTGGGTTGCTTGAGGTAGGATGGGAAGAGGTTATATGCAAATGGGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGGAAAAACAATTTCTCTAGAAGAGAGATGAAAACTCTTGAGGAGAAAGCTTCAGGGTTGACTCCCTaGAGCAGGGCTCCTACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGKNNFSRREMKTLEEKASGLTP*SRAPTE Trigger: TTCCGTAGGAGCCCTGCTGCAGGGAGTCAACCCTGA...AGCTTTCTCCTCAAGAGTTTTCATCTCTCTTCTAGAGAAATTGTTTTTCCCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGGAAAAACAATTTCTCTAGAAGAGAGATGAAAACTCTTGAGGAGAAAGCTGCAGTTTGCTTCTCCTaGCAGCTCAGCTGGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SGKNNFSRREMKTLEEKAAVCFS*QLSWAT Trigger: TGTGGCCCAGCTGAGCTGCCAGGAGAAGCAAACTGC...AGCTTTCTCCTCAAGAGTTTTCATCTCTCTTCTAGAGAAATTGTTTTTCCCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| 3UTR CAA 72 bp | AGTTCCAGGGTTCCTCTAATCTCTGCCTTCACAACATaGGAATTACAGACATGTGCTGCTGTACTGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSRVPLISAFTT*ELQTCAAVLAF Trigger: AAAAGCCAGTACAGCAGCACATGTCTGTAATTCCAATGTTGTGAAGGCAGAGATTAGAGGAACCCTGGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGGAAAAACAATTTCTCTAGAAGAGAGATGAAAACTCTTGAGGAGAAAGCTGAAGTAGGTGCAGTTTaGTTCTCCTGGCAGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGKNNFSRREMKTLEEKAEVGAV*FSWQLS Trigger: GCTGAGCTGCCAGGAGAAGCAAACTGCACCTACTTC...AGCTTTCTCCTCAAGAGTTTTCATCTCTCTTCTAGAGAAATTGTTTTTCCCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS TCA 90 bp | CACAGGTCTCCCTGCCCGCGGGCACATCCGCCTGCCACAGTCGCTTaGTGCACACCTTCCACAGCCCCAAATGGGCGGCCTCACAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: HRSPCPRAHPPATVA*CTPSTAPNGRPHRR Trigger: CCGTCTGTGAGGCCGCCCATTTGGGGCTGTGGAAGGTGTGCATCAAGCGACTGTGGCAGGCGGATGTGCCCGCGGGCAGGGAGACCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS GCA 90 bp | AGCTCAGCTGGGCCACAGGTCTCCCTGCCCGCGGGCACATCCGCCTaGCACAGTCGCTTGATGCACACCTTCCACAGCCCCAAATGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSAGPQVSLPAGTSA*HSRLMHTFHSPKWA Trigger: CGCCCATTTGGGGCTGTGGAAGGTGTGCATCAAGCGACTGTGGCAGGCGGATGTGCCCGCGGGCAGGGAGACCTGTGGCCCAGCTGAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS GCA 90 bp | GAACTCGGTGCCCACAGCCAGCACAGCCAGCGTAGCACCCACGATTaGCACCAGCAACCCCAGCTTGATCTTGCCCTCTCGCTCCGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ELGAHSQHSQRSTHD*HQQPQLDLALSLRS Trigger: ACTCCGGAGCGAGAGGGCAAGATCAAGCTGGGGTTGCTGGTGGCAATCGTGGGTGCTACGCTGGCTGTGCTGGCTGTGGGCACCGAGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS GCA 90 bp | GGAGGGGTCTCAGGGTTGACTCCCTGCAGCAGGGCTCCTACGGAATaGCGGAACACCTCCAGGCTGACAAAGAGCAGCAGGCCTGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGVSGLTPCSRAPTE*RNTSRLTKSSRPER Trigger: CCTCTCAGGCCTGCTGCTCTTTGTCAGCCTGGAGGTGTTCCGGCATTCCGTAGGAGCCCTGCTGCAGGGAGTCAACCCTGAGACCCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS GCA 90 bp | GCCCAAGGCCATGGCCGTCAGGCCCAGCACAGCTATCACGGCAGCTaGCAGGTTTACCTCTTTCTTGGTGGTTCGCTGGAAGATGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AQGHGRQAQHSYHGS*QVYLFLGGSLEDAR Trigger: GCGCGCATCTTCCAGCGAACCACCAAGAAAGAGGTAAACCTGGCAGCTGCCGTGATAGCTGTGCTGGGCCTGACGGCCATGGCCTTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS GCA 90 bp | GGAGGGGTCTCAGGGTTGACTCCCTGCAGCAGGGCTCCTACGGAATaGCGGAACACCTCCAGGCTGACAAAGAGCAGCAGGCCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGVSGLTPCSRAPTE*RNTSRLTKSSRPFL Trigger: CAAGAAAGGCCTGCTGCTCTTTGTCAGCCTGGAGGTGTTCCGGCATTCCGTAGGAGCCCTGCTGCAGGGAGTCAACCCTGAGACCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108647.3 |
||
| CDS TCA 90 bp | AATGGGCGGCCTCACAGACGGCGCTGCCATTGGTCTTGTATGTATTaGGTTCCACCCAGAACTCGGTGCCCACAGCCAGCACAGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: NGRPHRRRCHWSCMY*VPPRTRCPQPAQPA Trigger: CGCTGGCTGTGCTGGCTGTGGGCACCGAGTTCTGGGTGGAACTCAATACATACAAGACCAATGGCAGCGCCGTCTGTGAGGCCGCCCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS CCA 90 bp | TCCGCCTGCCACAGTCGCTTGATGCACACCTTCCACAGCCCCAAATaGGCGGCCTCACAGACGGCGCTGCCATTGGTCTTGTATGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: SACHSRLMHTFHSPK*AASQTALPLVLYVL Trigger: CAATACATACAAGACCAATGGCAGCGCCGTCTGTGAGGCCGCCCATTTGGGGCTGTGGAAGGTGTGCATCAAGCGACTGTGGCAGGCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTTCTGGGGATTCAAACTCCATGCCCTCAAGCTTGCTCAGCAAGCACTTTAGCCTGCCACAGTCGCTaGATGCACACCTTCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: WVLGIQTPCPQACSASTLACHSR*MHTFHS Trigger: GCTGTGGAAGGTGTGCATCAAGCGACTGTGGCAGGC...TAAAGTGCTTGCTGAGCAAGCTTGAGGGCATGGAGTTTGAATCCCCAGAACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR CAA 90 bp | CACCCCCAAAAGCATTATTTACAGGGAGAAGATGAGGGAGGGACCAAGACATTTGTTGGGCCACCCCACTaGGGGCACAGTGACCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HPQKHYLQGEDEGGTKTFVGPPH*GHSDLQ Trigger: CTGGAGGTCACTGTGCCCCAAGTGGGGTGGCCCAAC...AAATGTCTTGGTCCCTCCCTCATCTTCTCCCTGTAAATAATGCTTTTGGGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTTAGCATCTTCCTTTGTTGCTTCTGCCTTAGTTCTTAAGGGGTCTCTCGGAGGGGTCTCAGGGTaGACTCCCTGCAGCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QSLASSFVASALVLKGSLGGVSG*TPCSRA Trigger: AGCCCTGCTGCAGGGAGTCAACCCTGAGACCCCTCC...GAGAGACCCCTTAAGAACTAAGGCAGAAGCAACAAAGGAAGATGCTAAACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR CAA 90 bp | TCTAATCTCTGCCTTCACAACATTGGAATTACAGACATGTGCTGCTGTACTGGCGTTGGGCCACCCCACTaGGGGCACAGTGACCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SNLCLHNIGITDMCCCTGVGPPH*GHSDLQ Trigger: CTGGAGGTCACTGTGCCCCAAGTGGGGTGGCCCAAC...GCCAGTACAGCAGCACATGTCTGTAATTCCAATGTTGTGAAGGCAGAGATTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAAAACAATTTCTCTAGAAGAGAGATGAAAACTCTTGAGGAGAAAGCTGGAGGAGGGGTCTCAGGGTaGACTCCCTGCAGCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GKNNFSRREMKTLEEKAGGGVSG*TPCSRA Trigger: AGCCCTGCTGCAGGGAGTCAACCCTGAGACCCCTCC...TCCAGCTTTCTCCTCAAGAGTTTTCATCTCTCTTCTAGAGAAATTGTTTTTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR CAA 90 bp | CATGTGCTGCTGTACTGGCTTTTAAAGTGGGTTCTGGGGATTCAAACTCCATGCGCGTCGGTCTTCCTCTaGCATGAAGAAGTTAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: HVLLYWLLKWVLGIQTPCASVFL*HEEVRP Trigger: TGGTCTAACTTCTTCATGCAAGAGGAAGACCGACGC...GCATGGAGTTTGAATCCCCAGAACCCACTTTAAAAGCCAGTACAGCAGCACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGTTTCCCCACGGATCCCCATTTGCATATAACCTCTTCCCATCCTACCTCACAGACGGCGCTGCCATaGGTCTTGTATGTATTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RSFPTDPHLHITSSHPTSQTALP*VLYVLS Trigger: ACTCAATACATACAAGACCAATGGCAGCGCCGTCTG...TGAGGTAGGATGGGAAGAGGTTATATGCAAATGGGGATCCGTGGGGAAACTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR CAA 90 bp | CACCCCCAAAAGCATTATTTACAGGGAGAAGATGAGGGAGGGACCAAGACATTTGCGCTGCCATTGGTCTaGTATGTATTGAGTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: HPQKHYLQGEDEGGTKTFALPLV*YVLSST Trigger: GGTGGAACTCAATACATACAAGACCAATGGCAGCGC...AAATGTCTTGGTCCCTCCCTCATCTTCTCCCTGTAAATAATGCTTTTGGGGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGGAAAAACAATTTCTCTAGAAGAGAGATGAAAACTCTTGAGGAGAAAGCTGCCTGCCACAGTCGCTaGATGCACACCTTCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGKNNFSRREMKTLEEKAACHSR*MHTFHS Trigger: GCTGTGGAAGGTGTGCATCAAGCGACTGTGGCAGGC...AGCTTTCTCCTCAAGAGTTTTCATCTCTCTTCTAGAGAAATTGTTTTTCCCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAAAACAATTTCTCTAGAAGAGAGATGAAAACTCTTGAGGAGAAAGCTGGAGCGTCGGTCTTCCTCTaGCATGAAGAAGTTAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: GKNNFSRREMKTLEEKAGASVFL*HEEVRP Trigger: TGGTCTAACTTCTTCATGCAAGAGGAAGACCGACGC...TCCAGCTTTCTCCTCAAGAGTTTTCATCTCTCTTCTAGAGAAATTGTTTTTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR CAA 90 bp | CATTTGCATATAACCTCTTCCCATCCTACCTCAAGCAACCCAAAATCATCTACCTTGGTCTTGTATGTATaGAGTTCCACCCAGAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: HLHITSSHPTSSNPKSSTLVLYV*SSTQNS Trigger: CGAGTTCTGGGTGGAACTCAATACATACAAGACCAA...GGTAGATGATTTTGGGTTGCTTGAGGTAGGATGGGAAGAGGTTATATGCAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS-3UTR CAA 90 bp | AAAAACAATTTCTCTAGAAGAGAGATGAAAACTCTTGAGGAGAAAGCTGGAAACCAGACGGCGCTGCCATaGGTCTTGTATGTATTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KNNFSRREMKTLEEKAGNQTALP*VLYVLS Trigger: ACTCAATACATACAAGACCAATGGCAGCGCCGTCTG...GTTTCCAGCTTTCTCCTCAAGAGTTTTCATCTCTCTTCTAGAGAAATTGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS-3UTR CAA 90 bp | AAAAACAATTTCTCTAGAAGAGAGATGAAAACTCTTGAGGAGAAAGCTGGAAACTTGGTCTTGTATGTATaGAGTTCCACCCAGAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: KNNFSRREMKTLEEKAGNLVLYV*SSTQNS Trigger: CGAGTTCTGGGTGGAACTCAATACATACAAGACCAA...GTTTCCAGCTTTCTCCTCAAGAGTTTTCATCTCTCTTCTAGAGAAATTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS TCA 72 bp | CCCTGCCCGCGGGCACATCCGCCTGCCACAGTCGCTTaGTGCACACCTTCCACAGCCCCAAATGGGCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PCPRAHPPATVA*CTPSTAPNGRP Trigger: AGGCCGCCCATTTGGGGCTGTGGAAGGTGTGCATCAAGCGACTGTGGCAGGCGGATGTGCCCGCGGGCAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS CAA 72 bp | TCCCTGCCCGCGGGCACATCCGCCTGCCACAGTCGCTaGATGCACACCTTCCACAGCCCCAAATGGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLPAGTSACHSR*MHTFHSPKWAA Trigger: GGCCGCCCATTTGGGGCTGTGGAAGGTGTGCATCAAGCGACTGTGGCAGGCGGATGTGCCCGCGGGCAGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS CAA 90 bp | CCACAGGTCTCCCTGCCCGCGGGCACATCCGCCTGCCACAGTCGCTaGATGCACACCTTCCACAGCCCCAAATGGGCGGCCTCACAGACG | + |
|
Preference number: 6 (lower is better) Translates to: PQVSLPAGTSACHSR*MHTFHSPKWAASQT Trigger: CGTCTGTGAGGCCGCCCATTTGGGGCTGTGGAAGGTGTGCATCAAGCGACTGTGGCAGGCGGATGTGCCCGCGGGCAGGGAGACCTGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS GCA 72 bp | AGGCGTGGAGCTGGAGGGGTCTCAGGGTTGACTCCCTaGAGCAGGGCTCCTACGGAATGCCGGAACACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRGAGGVSGLTP*SRAPTECRNTS Trigger: GGAGGTGTTCCGGCATTCCGTAGGAGCCCTGCTGCAGGGAGTCAACCCTGAGACCCCTCCAGCTCCACGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS GCA 72 bp | GCCCACAGCCAGCACAGCCAGCGTAGCACCCACGATTaGCACCAGCAACCCCAGCTTGATCTTGCCCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: AHSQHSQRSTHD*HQQPQLDLALS Trigger: CGAGAGGGCAAGATCAAGCTGGGGTTGCTGGTGGCAATCGTGGGTGCTACGCTGGCTGTGCTGGCTGTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS GCA 72 bp | TCAGGGTTGACTCCCTGCAGCAGGGCTCCTACGGAATaGCGGAACACCTCCAGGCTGACAAAGAGCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SGLTPCSRAPTE*RNTSRLTKSSR Trigger: CCTGCTGCTCTTTGTCAGCCTGGAGGTGTTCCGGCATTCCGTAGGAGCCCTGCTGCAGGGAGTCAACCCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS CCA 72 bp | CACAGTCGCTTGATGCACACCTTCCACAGCCCCAAATaGGCGGCCTCACAGACGGCGCTGCCATTGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: HSRLMHTFHSPK*AASQTALPLVL Trigger: CAAGACCAATGGCAGCGCCGTCTGTGAGGCCGCCCATTTGGGGCTGTGGAAGGTGTGCATCAAGCGACTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS CAA 72 bp | GCACCCACGATTGCCACCAGCAACCCCAGCTTGATCTaGCCCTCTCGCTCCGGAGTCAAGCCGAGATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: APTIATSNPSLI*PSRSGVKPRFC Trigger: GCAGAATCTCGGCTTGACTCCGGAGCGAGAGGGCAAGATCAAGCTGGGGTTGCTGGTGGCAATCGTGGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS CAA 72 bp | AGCGTAGCACCCACGATTGCCACCAGCAACCCCAGCTaGATCTTGCCCTCTCGCTCCGGAGTCAAGCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SVAPTIATSNPS*ILPSRSGVKPR Trigger: TCTCGGCTTGACTCCGGAGCGAGAGGGCAAGATCAAGCTGGGGTTGCTGGTGGCAATCGTGGGTGCTACGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS CAA 90 bp | GCCAGCGTAGCACCCACGATTGCCACCAGCAACCCCAGCTTGATCTaGCCCTCTCGCTCCGGAGTCAAGCCGAGATTCTGCTGTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: ASVAPTIATSNPSLI*PSRSGVKPRFCCSW Trigger: CCAAGAACAGCAGAATCTCGGCTTGACTCCGGAGCGAGAGGGCAAGATCAAGCTGGGGTTGCTGGTGGCAATCGTGGGTGCTACGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS CAA 90 bp | AGCACAGCCAGCGTAGCACCCACGATTGCCACCAGCAACCCCAGCTaGATCTTGCCCTCTCGCTCCGGAGTCAAGCCGAGATTCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: STASVAPTIATSNPS*ILPSRSGVKPRFCC Trigger: ACAGCAGAATCTCGGCTTGACTCCGGAGCGAGAGGGCAAGATCAAGCTGGGGTTGCTGGTGGCAATCGTGGGTGCTACGCTGGCTGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS CAA 90 bp | CACAGCCCCAAATGGGCGGCCTCACAGACGGCGCTGCCATTGGTCTaGTATGTATTGAGTTCCACCCAGAACTCGGTGCCCACAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HSPKWAASQTALPLV*YVLSSTQNSVPTAS Trigger: GCTGGCTGTGGGCACCGAGTTCTGGGTGGAACTCAATACATACAAGACCAATGGCAGCGCCGTCTGTGAGGCCGCCCATTTGGGGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS CAA 90 bp | AAATGGGCGGCCTCACAGACGGCGCTGCCATTGGTCTTGTATGTATaGAGTTCCACCCAGAACTCGGTGCCCACAGCCAGCACAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KWAASQTALPLVLYV*SSTQNSVPTASTAS Trigger: GCTGGCTGTGCTGGCTGTGGGCACCGAGTTCTGGGTGGAACTCAATACATACAAGACCAATGGCAGCGCCGTCTGTGAGGCCGCCCATTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS CAA 90 bp | ACCTTCCACAGCCCCAAATGGGCGGCCTCACAGACGGCGCTGCCATaGGTCTTGTATGTATTGAGTTCCACCCAGAACTCGGTGCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TFHSPKWAASQTALP*VLYVLSSTQNSVPT Trigger: TGTGGGCACCGAGTTCTGGGTGGAACTCAATACATACAAGACCAATGGCAGCGCCGTCTGTGAGGCCGCCCATTTGGGGCTGTGGAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS GCA 72 bp | CATGGCCGTCAGGCCCAGCACAGCTATCACGGCAGCTaGCAGGTTTACCTCTTTCTTGGTGGTTCGCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HGRQAQHSYHGS*QVYLFLGGSLE Trigger: TTCCAGCGAACCACCAAGAAAGAGGTAAACCTGGCAGCTGCCGTGATAGCTGTGCTGGGCCTGACGGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS CAA 72 bp | GCCTCACAGACGGCGCTGCCATTGGTCTTGTATGTATaGAGTTCCACCCAGAACTCGGTGCCCACAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASQTALPLVLYV*SSTQNSVPTAS Trigger: GCTGGCTGTGGGCACCGAGTTCTGGGTGGAACTCAATACATACAAGACCAATGGCAGCGCCGTCTGTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS TCA 72 bp | CCTCACAGACGGCGCTGCCATTGGTCTTGTATGTATTaGGTTCCACCCAGAACTCGGTGCCCACAGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PHRRRCHWSCMY*VPPRTRCPQPA Trigger: TGCTGGCTGTGGGCACCGAGTTCTGGGTGGAACTCAATACATACAAGACCAATGGCAGCGCCGTCTGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS CCA 72 bp | CTATCACGGCAGCTGCCAGGTTTACCTCTTTCTTGGTaGTTCGCTGGAAGATGCGCGCATTTTCCCCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSRQLPGLPLSW*FAGRCAHFPPW Trigger: CCACGGGGGAAAATGCGCGCATCTTCCAGCGAACCACCAAGAAAGAGGTAAACCTGGCAGCTGCCGTGATAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS CCA 72 bp | CAGCTATCACGGCAGCTGCCAGGTTTACCTCTTTCTTaGTGGTTCGCTGGAAGATGCGCGCATTTTCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QLSRQLPGLPLS*WFAGRCAHFPP Trigger: CGGGGGAAAATGCGCGCATCTTCCAGCGAACCACCAAGAAAGAGGTAAACCTGGCAGCTGCCGTGATAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS CAA 72 bp | AAATGGGCGGCCTCACAGACGGCGCTGCCATTGGTCTaGTATGTATTGAGTTCCACCCAGAACTCGGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: KWAASQTALPLV*YVLSSTQNSVP Trigger: GGGCACCGAGTTCTGGGTGGAACTCAATACATACAAGACCAATGGCAGCGCCGTCTGTGAGGCCGCCCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS CAA 72 bp | AGCCCCAAATGGGCGGCCTCACAGACGGCGCTGCCATaGGTCTTGTATGTATTGAGTTCCACCCAGAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: SPKWAASQTALP*VLYVLSSTQNS Trigger: CGAGTTCTGGGTGGAACTCAATACATACAAGACCAATGGCAGCGCCGTCTGTGAGGCCGCCCATTTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108647.3 ENSMUST00000183200.8 |
||
| CDS CAA 72 bp | AACACCTCCAGGCTGACAAAGAGCAGCAGGCCTTTCTaGGTGGTTCGCTGGAAGATGCGCGCATTTTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: NTSRLTKSSRPF*VVRWKMRAFSP Trigger: GGGGGAAAATGCGCGCATCTTCCAGCGAACCACCAAGAAAGGCCTGCTGCTCTTTGTCAGCCTGGAGGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108647.3 |
||
| CDS GCA 72 bp | GCCAAAGCAGACAGCTCCCAATCGGAGCAGGGACTCTaGACCTTTACTGAGCACCATGATGACACAGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: AKADSSQSEQGL*TFTEHHDDTEA Trigger: TGCCTCTGTGTCATCATGGTGCTCAGTAAAGGTGCAGAGTCCCTGCTCCGATTGGGAGCTGTCTGCTTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS CAA 72 bp | ACAGCTATCACGGCAGCTGCCAGGTTTACCTCTTTCTaGGTGGTTCGCTGGAAGATGCGCGCATTTTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TAITAAARFTSF*VVRWKMRAFSP Trigger: GGGGGAAAATGCGCGCATCTTCCAGCGAACCACCAAGAAAGAGGTAAACCTGGCAGCTGCCGTGATAGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||
| CDS CCA 72 bp | CTGACAAAGAGCAGCAGGCCTTTCTTGGTGGTTCGCTaGAAGATGCGCGCATTTTCCCCCGTGGTGAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LTKSSRPFLVVR*KMRAFSPVVKN Trigger: ATTCTTCACCACGGGGGAAAATGCGCGCATCTTCCAGCGAACCACCAAGAAAGGCCTGCTGCTCTTTGTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108647.3 |
||
| CDS CCA 72 bp | GCAGCTGCCAGGTTTACCTCTTTCTTGGTGGTTCGCTaGAAGATGCGCGCATTTTCCCCCGTGGTGAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: AAARFTSFLVVR*KMRAFSPVVKN Trigger: ATTCTTCACCACGGGGGAAAATGCGCGCATCTTCCAGCGAACCACCAAGAAAGAGGTAAACCTGGCAGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183200.8 |
||