Pregenerated sensors for CACNG5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040373Ensembl transcript IDs: ENSMUST00000039071.3, ENSMUST00000106742.8
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGTGGCTGTGGCTGTGGAGGGGATGTGTGGAGGCAGTCCCAGCTaGGCATTTCAGAACTGGAGGGTTCGCCCAAGGATTGACTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: GVAVAVEGMCGGSPS*AFQNWRVRPRIDSG Trigger: CCCTGAGTCAATCCTTGGGCGAACCCTCCAGTTCTGAAATGCTCAGCTGGGACTGCCTCCACACATCCCCTCCACAGCCACAGCCACACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR GCA 90 bp | GCCGACACCTGGGGGACTATGGGAGTTTTGTGGACTTCTCAGAAGTaGCTGCAGCCTCCCAGCTCCGAGTTCCCATCAGGGAAGCAGTTG | + |
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Preference number: 1 (lower is better) Translates to: ADTWGTMGVLWTSQK*LQPPSSEFPSGKQL Trigger: CAACTGCTTCCCTGATGGGAACTCGGAGCTGGGAGGCTGCAGGCACTTCTGAGAAGTCCACAAAACTCCCATAGTCCCCCAGGTGTCGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CCA 90 bp | ACAACATGGAGTGCTGCTGGCATCCCTGGAGCCCGTGGCTATGATTaGCACTCTAGAGGCGGGGCTTCACCCATGCTCTCAGCCAATCAG | + |
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Preference number: 1 (lower is better) Translates to: TTWSAAGIPGARGYD*HSRGGASPMLSANQ Trigger: CTGATTGGCTGAGAGCATGGGTGAAGCCCCGCCTCTAGAGTGCCAATCATAGCCACGGGCTCCAGGGATGCCAGCAGCACTCCATGTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CCA 90 bp | GGGAGAAGATGTGGTCAAGTAACAATGGCTAAGCAGGGAACAGCCTaGGCCTTAGCTCAGGGGGAGAGGGGAACGCTGTCCAGCCATCCA | + |
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Preference number: 1 (lower is better) Translates to: GRRCGQVTMAKQGTA*ALAQGERGTLSSHP Trigger: TGGATGGCTGGACAGCGTTCCCCTCTCCCCCTGAGCTAAGGCCCAGGCTGTTCCCTGCTTAGCCATTGTTACTTGACCACATCTTCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CCA 90 bp | CTCAGAACGAACAATGGTCCAGCTGAGCCGACACCTGGGGGACTATaGGAGTTTTGTGGACTTCTCAGAAGTGCCTGCAGCCTCCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: LRTNNGPAEPTPGGL*EFCGLLRSACSLPA Trigger: AGCTGGGAGGCTGCAGGCACTTCTGAGAAGTCCACAAAACTCCCATAGTCCCCCAGGTGTCGGCTCAGCTGGACCATTGTTCGTTCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CCA 90 bp | TGGCACACAAGAACAATGTGGACTGGATCACTGGAGGTGTGGCTGTaGCTGTGGAGGGGATGTGTGGAGGCAGTCCCAGCTGAGCATTTC | + |
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Preference number: 1 (lower is better) Translates to: WHTRTMWTGSLEVWL*LWRGCVEAVPAEHF Trigger: GAAATGCTCAGCTGGGACTGCCTCCACACATCCCCTCCACAGCCACAGCCACACCTCCAGTGATCCAGTCCACATTGTTCTTGTGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CCA 90 bp | AGAAACTGGCACACAAGAACAATGTGGACTGGATCACTGGAGGTGTaGCTGTGGCTGTGGAGGGGATGTGTGGAGGCAGTCCCAGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: RNWHTRTMWTGSLEV*LWLWRGCVEAVPAE Trigger: CTCAGCTGGGACTGCCTCCACACATCCCCTCCACAGCCACAGCCACACCTCCAGTGATCCAGTCCACATTGTTCTTGTGTGCCAGTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR GCA 90 bp | CATCGTCCTTCTGTAGGCGCCAGCTGTGTGGTTTCCTGTGCCACTTaGCAGAGCCTGCAAGTCACCCACTGTGGCTTTGTATATTCGGGT | + |
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Preference number: 1 (lower is better) Translates to: HRPSVGASCVVSCAT*QSLQVTHCGFVYSG Trigger: ACCCGAATATACAAAGCCACAGTGGGTGACTTGCAGGCTCTGGCAAGTGGCACAGGAAACCACACAGCTGGCGCCTACAGAAGGACGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR GCA 90 bp | ACTGAGTCATCGTCCTTCTGTAGGCGCCAGCTGTGTGGTTTCCTGTaGCACTTGCCAGAGCCTGCAAGTCACCCACTGTGGCTTTGTATA | + |
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Preference number: 1 (lower is better) Translates to: TESSSFCRRQLCGFL*HLPEPASHPLWLCI Trigger: TATACAAAGCCACAGTGGGTGACTTGCAGGCTCTGGCAAGTGGCACAGGAAACCACACAGCTGGCGCCTACAGAAGGACGATGACTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR GCA 90 bp | ATGGGCCCGGCAAAAATACACCACACAGAGAATGCCACATTGGCTTaGCTCTCACAGCTCTCAGAACGAACAATGGTCCAGCTGAGCCGA | + |
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Preference number: 1 (lower is better) Translates to: MGPAKIHHTENATLA*LSQLSERTMVQLSR Trigger: TCGGCTCAGCTGGACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCTCTGTGTGGTGTATTTTTGCCGGGCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CCA 90 bp | GCCATGAAACTGGGAAGCGGATGCTTTCCCATATTAGGATTAAGTTaGCAACGTCCAGATGTTCACAGGCACCATCAGCAGGGCAGCCGG | + |
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Preference number: 1 (lower is better) Translates to: AMKLGSGCFPILGLS*QRPDVHRHHQQGSR Trigger: CCGGCTGCCCTGCTGATGGTGCCTGTGAACATCTGGACGTTGCCAACTTAATCCTAATATGGGAAAGCATCCGCTTCCCAGTTTCATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR GCA 90 bp | GAACGAGGCAAGAATGGGCCCGGCAAAAATACACCACACAGAGAATaGCACATTGGCTTGCCTCTCACAGCTCTCAGAACGAACAATGGT | + |
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Preference number: 1 (lower is better) Translates to: ERGKNGPGKNTPHRE*HIGLPLTALRTNNG Trigger: ACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCTCTGTGTGGTGTATTTTTGCCGGGCCCATTCTTGCCTCGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CCA 90 bp | GTCTGTATCAGAGACTTGGCAACTCCAGCCTGGCCTTGGCTAACCTaGAAGTGCAGGAACAAAACTCAACTAGAACACAGGCATCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: VCIRDLATPAWPWLT*KCRNKTQLEHRHLP Trigger: AGGAAGATGCCTGTGTTCTAGTTGAGTTTTGTTCCTGCACTTCCAGGTTAGCCAAGGCCAGGCTGGAGTTGCCAAGTCTCTGATACAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR GCA 90 bp | CACCACACCTGGATTATACAGTGTTCGGTCAAATCCAGGGCTTCATaGATGCTAGGCCAGAACTCACTAACTGAGTTATTATCCCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: HHTWIIQCSVKSRAS*MLGQNSLTELLSPA Trigger: GGCTGGGGATAATAACTCAGTTAGTGAGTTCTGGCCTAGCATGCATGAAGCCCTGGATTTGACCGAACACTGTATAATCCAGGTGTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR GCA 90 bp | GAGGCACGTGATTTGCCCACATATGCCATGAAACTGGGAAGCGGATaGTTTCCCATATTAGGATTAAGTTGGCAACGTCCAGATGTTCAC | + |
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Preference number: 1 (lower is better) Translates to: EARDLPTYAMKLGSG*FPILGLSWQRPDVH Trigger: GTGAACATCTGGACGTTGCCAACTTAATCCTAATATGGGAAAGCATCCGCTTCCCAGTTTCATGGCATATGTGGGCAAATCACGTGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCGTGCCCTCTCCCAGATTTGTACTCTGAGACCCCAATCTCCGGTACCTCAGCATCCACAGTTCAGGTaGGGAGGAGGCTGGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SRALSQICTLRPQSPVPQHPQFR*GGGWGW Trigger: CCAGCCCCAGCCTCCTCCCCACCTGAACTGTGGATG...CTGAGGTACCGGAGATTGGGGTCTCAGAGTACAAATCTGGGAGAGGGCACGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCTCAGAACGAACAATGGTCCAGCTGAGCCGACACCTGGGGGACTATGGGAGCTTCTCAGAAGTGCCTaGAGCCTCCCAGCTCCGAGT | + |
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Preference number: 2 (lower is better) Translates to: ALRTNNGPAEPTPGGLWELLRSA*SLPAPS Trigger: ACTCGGAGCTGGGAGGCTGCAGGCACTTCTGAGAAG...CTCCCATAGTCCCCCAGGTGTCGGCTCAGCTGGACCATTGTTCGTTCTGAGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTGCCACTTGCCAGAGCCTGCAAGTCACCCACTGTGGCTTTGTATATTCGGGATGGTCCAGGGCCTaGGGGGAGGGCAGTGCTACA | + |
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Preference number: 2 (lower is better) Translates to: SCATCQSLQVTHCGFVYSGWSRA*GEGSAT Trigger: TGTAGCACTGCCCTCCCCCCAGGCCCTGGACCATCC...CGAATATACAAAGCCACAGTGGGTGACTTGCAGGCTCTGGCAAGTGGCACAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGGAGGCAGTCCCAGCTGAGCATTTCAGAACTGGAGGGTTCGCCCAAGGAGCGGGGCTTCACCCATaGTCTCAGCCAATCAGCATG | + |
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Preference number: 2 (lower is better) Translates to: CVEAVPAEHFRTGGFAQGAGLHP*SQPISM Trigger: CATGCTGATTGGCTGAGAGCATGGGTGAAGCCCCGC...TCCTTGGGCGAACCCTCCAGTTCTGAAATGCTCAGCTGGGACTGCCTCCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTGCCACTTGCCAGAGCCTGCAAGTCACCCACTGTGGCTTTGTATATTCGCATCCACAGTTCAGGTaGGGAGGAGGCTGGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SCATCQSLQVTHCGFVYSHPQFR*GGGWGW Trigger: CCAGCCCCAGCCTCCTCCCCACCTGAACTGTGGATG...CGAATATACAAAGCCACAGTGGGTGACTTGCAGGCTCTGGCAAGTGGCACAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CAA 90 bp | GCAGCCTCCCAGCTCCGAGTTCCCATCAGGGAAGCAGTTGTCACATaGTCTGGCACTCTGGAGGCACGTGATTTGCCCACATATGCCATG | + |
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Preference number: 2 (lower is better) Translates to: AASQLRVPIREAVVT*SGTLEARDLPTYAM Trigger: CATGGCATATGTGGGCAAATCACGTGCCTCCAGAGTGCCAGACAATGTGACAACTGCTTCCCTGATGGGAACTCGGAGCTGGGAGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR TCA 90 bp | AGAACACAGGCATCTTCCTGCACAGCACAACATGGAGTGCTGCTGGCATCCCTGTCTGACTCCAGGCTCTaGTGCCCACCGAAGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: RTQASSCTAQHGVLLASLSDSRL*CPPKDA Trigger: AGCATCCTTCGGTGGGCATCAGAGCCTGGAGTCAGA...CAGGGATGCCAGCAGCACTCCATGTTGTGCTGTGCAGGAAGATGCCTGTGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR GCA 90 bp | AGAACACAGGCATCTTCCTGCACAGCACAACATGGAGTGCTGCTGGCATCCCTGGCGGGGCTTCACCCATaGTCTCAGCCAATCAGCATG | + |
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Preference number: 2 (lower is better) Translates to: RTQASSCTAQHGVLLASLAGLHP*SQPISM Trigger: CATGCTGATTGGCTGAGAGCATGGGTGAAGCCCCGC...CAGGGATGCCAGCAGCACTCCATGTTGTGCTGTGCAGGAAGATGCCTGTGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGGAGGCAGTCCCAGCTGAGCATTTCAGAACTGGAGGGTTCGCCCAAGGAGTTTCCTGTGCCACTTaGCAGAGCCTGCAAGTCACC | + |
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Preference number: 2 (lower is better) Translates to: CVEAVPAEHFRTGGFAQGVSCAT*QSLQVT Trigger: GGTGACTTGCAGGCTCTGGCAAGTGGCACAGGAAAC...TCCTTGGGCGAACCCTCCAGTTCTGAAATGCTCAGCTGGGACTGCCTCCACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCGTGCCCTCTCCCAGATTTGTACTCTGAGACCCCAATCTCCGGTACCTCAGTGCCCACATATGCCATaGAACTGGGAAGCGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: SRALSQICTLRPQSPVPQCPHMP*NWEADA Trigger: AGCATCCGCTTCCCAGTTTCATGGCATATGTGGGCA...CTGAGGTACCGGAGATTGGGGTCTCAGAGTACAAATCTGGGAGAGGGCACGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTGTGCCACTTGCCAGAGCCTGCAAGTCACCCACTGTGGCTTTGTATATTCGTGGACTTCTCAGAAGTaGCTGCAGCCTCCCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: SCATCQSLQVTHCGFVYSWTSQK*LQPPSS Trigger: GGAGCTGGGAGGCTGCAGGCACTTCTGAGAAGTCCA...CGAATATACAAAGCCACAGTGGGTGACTTGCAGGCTCTGGCAAGTGGCACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCCCTCATGGGGAAGAAAGGGACCCAGACCCATTACTACAGTAAGTGCGCATAACATGGAGTGCTGCTaGCATCCCTGGAGCCCGTGG | + |
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Preference number: 2 (lower is better) Translates to: IPSWGRKGPRPITTVSAHNMECC*HPWSPW Trigger: CCACGGGCTCCAGGGATGCCAGCAGCACTCCATGTT...ATGCGCACTTACTGTAGTAATGGGTCTGGGTCCCTTTCTTCCCCATGAGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTGCCACTTGCCAGAGCCTGCAAGTCACCCACTGTGGCTTTGTATATTCGAGTCCAGCTCATGGATaGAGAGCCAGGCTGGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: SCATCQSLQVTHCGFVYSSPAHG*RARLVG Trigger: GCCTACCAGCCTGGCTCTCCATCCATGAGCTGGACT...CGAATATACAAAGCCACAGTGGGTGACTTGCAGGCTCTGGCAAGTGGCACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR CCA 90 bp | GATATTGAACTTCTGGCCTCTTCCATGCTGACTGAGTCATCGTCCTTCTGTAGGGGATGGTCCAGGGCCTaGGGGGAGGGCAGTGCTACA | + |
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Preference number: 2 (lower is better) Translates to: DIELLASSMLTESSSFCRGWSRA*GEGSAT Trigger: TGTAGCACTGCCCTCCCCCCAGGCCCTGGACCATCC...CCTACAGAAGGACGATGACTCAGTCAGCATGGAAGAGGCCAGAAGTTCAATATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGAGCCGACACCTGGGGGACTATGGGAGTTTTGTGGACTTCTCAGAAGTGTGCCCACATATGCCATaGAACTGGGAAGCGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: QLSRHLGDYGSFVDFSEVCPHMP*NWEADA Trigger: AGCATCCGCTTCCCAGTTTCATGGCATATGTGGGCA...CACTTCTGAGAAGTCCACAAAACTCCCATAGTCCCCCAGGTGTCGGCTCAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCCCTCATGGGGAAGAAAGGGACCCAGACCCATTACTACAGTAAGTGCGCATGGAGGCAGTCCCAGCTaGGCATTTCAGAACTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: IPSWGRKGPRPITTVSAHGGSPS*AFQNWR Trigger: CCTCCAGTTCTGAAATGCTCAGCTGGGACTGCCTCC...ATGCGCACTTACTGTAGTAATGGGTCTGGGTCCCTTTCTTCCCCATGAGGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CAA 90 bp | GCTGGTAGGCAAGCATTCAAGTCTGCCTTTGTCTGTATCAGAGACTaGGCAACTCCAGCCTGGCCTTGGCTAACCTGGAAGTGCAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: AGRQAFKSAFVCIRD*ATPAWPWLTWKCRN Trigger: GTTCCTGCACTTCCAGGTTAGCCAAGGCCAGGCTGGAGTTGCCAAGTCTCTGATACAGACAAAGGCAGACTTGAATGCTTGCCTACCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CAA 90 bp | AATGGGCCCGGCAAAAATACACCACACAGAGAATGCCACATTGGCTaGCCTCTCACAGCTCTCAGAACGAACAATGGTCCAGCTGAGCCG | + |
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Preference number: 2 (lower is better) Translates to: NGPGKNTPHRECHIG*PLTALRTNNGPAEP Trigger: CGGCTCAGCTGGACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCTCTGTGTGGTGTATTTTTGCCGGGCCCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCTCAGAACGAACAATGGTCCAGCTGAGCCGACACCTGGGGGACTATGGGAGGGGCTCAAAACGCACTaGACCATCAAATCTAGCTTA | + |
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Preference number: 2 (lower is better) Translates to: ALRTNNGPAEPTPGGLWEGLKTH*TIKSSL Trigger: TAAGCTAGATTTGATGGTTCAGTGCGTTTTGAGCCC...CTCCCATAGTCCCCCAGGTGTCGGCTCAGCTGGACCATTGTTCGTTCTGAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTGTGCCACTTGCCAGAGCCTGCAAGTCACCCACTGTGGCTTTGTATATTCGGCTAGCTACTCTGGGTaGAGGGAGAAGATGTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: SCATCQSLQVTHCGFVYSASYSG*REKMWS Trigger: TGACCACATCTTCTCCCTGCACCCAGAGTAGCTAGC...CGAATATACAAAGCCACAGTGGGTGACTTGCAGGCTCTGGCAAGTGGCACAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGAATGCCACATTGGCTTGCCTCTCACAGCTCTCAGAACGAACAATGGTCTGGACTTCTCAGAAGTaGCTGCAGCCTCCCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: TENATLACLSQLSERTMVWTSQK*LQPPSS Trigger: GGAGCTGGGAGGCTGCAGGCACTTCTGAGAAGTCCA...GACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCCCTCATGGGGAAGAAAGGGACCCAGACCCATTACTACAGTAAGTGCGCATTCACAGTCCAGCTCATaGATGGAGAGCCAGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: IPSWGRKGPRPITTVSAHSQSSS*MESQAG Trigger: ACCAGCCTGGCTCTCCATCCATGAGCTGGACTGTGA...ATGCGCACTTACTGTAGTAATGGGTCTGGGTCCCTTTCTTCCCCATGAGGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTGTTAATAACATTGACAAAAGTTGGAGTCGAGCGCACCCAGACGCGCATGTGTGGCTGTGGCTGTaGAGGGGATGTGTGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: TGVNNIDKSWSRAHPDAHVWLWL*RGCVEA Trigger: TGCCTCCACACATCCCCTCCACAGCCACAGCCACAC...ATGCGCGTCTGGGTGCGCTCGACTCCAACTTTTGTCAATGTTATTAACACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CAA 90 bp | TGCCATGAAACTGGGAAGCGGATGCTTTCCCATATTAGGATTAAGTaGGCAACGTCCAGATGTTCACAGGCACCATCAGCAGGGCAGCCG | + |
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Preference number: 2 (lower is better) Translates to: CHETGKRMLSHIRIK*ATSRCSQAPSAGQP Trigger: CGGCTGCCCTGCTGATGGTGCCTGTGAACATCTGGACGTTGCCAACTTAATCCTAATATGGGAAAGCATCCGCTTCCCAGTTTCATGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CAA 90 bp | GCAAGAATGGGCCCGGCAAAAATACACCACACAGAGAATGCCACATaGGCTTGCCTCTCACAGCTCTCAGAACGAACAATGGTCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: ARMGPAKIHHTENAT*ACLSQLSERTMVQL Trigger: CAGCTGGACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCTCTGTGTGGTGTATTTTTGCCGGGCCCATTCTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CAA 90 bp | GCAGTCCCAGCTGAGCATTTCAGAACTGGAGGGTTCGCCCAAGGATaGACTCAGGGACTGAACCGACAGGCAAAAGTAAGCTTCTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: AVPAEHFRTGGFAQG*TQGLNRQAKVSFSF Trigger: GAAAGAGAAGCTTACTTTTGCCTGTCGGTTCAGTCCCTGAGTCAATCCTTGGGCGAACCCTCCAGTTCTGAAATGCTCAGCTGGGACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR TCA 90 bp | GATATTGAACTTCTGGCCTCTTCCATGCTGACTGAGTCATCGTCCTTCTGTAGGCAATCAGCATGCCTCTaGCTCCAGGCTCTGATGCCC | + |
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Preference number: 2 (lower is better) Translates to: DIELLASSMLTESSSFCRQSACL*LQALMP Trigger: GGGCATCAGAGCCTGGAGTCAGAGGCATGCTGATTG...CCTACAGAAGGACGATGACTCAGTCAGCATGGAAGAGGCCAGAAGTTCAATATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR GCA 90 bp | GATATTGAACTTCTGGCCTCTTCCATGCTGACTGAGTCATCGTCCTTCTGTAGGCTTCTCAGAAGTGCCTaGAGCCTCCCAGCTCCGAGT | + |
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Preference number: 2 (lower is better) Translates to: DIELLASSMLTESSSFCRLLRSA*SLPAPS Trigger: ACTCGGAGCTGGGAGGCTGCAGGCACTTCTGAGAAG...CCTACAGAAGGACGATGACTCAGTCAGCATGGAAGAGGCCAGAAGTTCAATATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGATACAGAAACTGGCACACAAGAACAATGTGGACTGGATCACTGGAGGTGTAACATGGAGTGCTGCTaGCATCCCTGGAGCCCGTGG | + |
|
Preference number: 2 (lower is better) Translates to: EDTETGTQEQCGLDHWRCNMECC*HPWSPW Trigger: CCACGGGCTCCAGGGATGCCAGCAGCACTCCATGTT...ACACCTCCAGTGATCCAGTCCACATTGTTCTTGTGTGCCAGTTTCTGTATCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CCA 90 bp | GATATTGAACTTCTGGCCTCTTCCATGCTGACTGAGTCATCGTCCTTCTGTAGGAGTCCAGCTCATGGATaGAGAGCCAGGCTGGTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: DIELLASSMLTESSSFCRSPAHG*RARLVG Trigger: GCCTACCAGCCTGGCTCTCCATCCATGAGCTGGACT...CCTACAGAAGGACGATGACTCAGTCAGCATGGAAGAGGCCAGAAGTTCAATATC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTGGAGGCAGTCCCAGCTGAGCATTTCAGAACTGGAGGGTTCGCCCAAGGAGTATACCACCACACCTaGATTATACAGTGTTCGGTC | + |
|
Preference number: 2 (lower is better) Translates to: CVEAVPAEHFRTGGFAQGVYHHT*IIQCSV Trigger: GACCGAACACTGTATAATCCAGGTGTGGTGGTATAC...TCCTTGGGCGAACCCTCCAGTTCTGAAATGCTCAGCTGGGACTGCCTCCACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAGAATGCCACATTGGCTTGCCTCTCACAGCTCTCAGAACGAACAATGGTCGCTAGCTACTCTGGGTaGAGGGAGAAGATGTGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: TENATLACLSQLSERTMVASYSG*REKMWS Trigger: TGACCACATCTTCTCCCTGCACCCAGAGTAGCTAGC...GACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR GCA 90 bp | GCATTCAAGTCTGCCTTTGTCTGTATCAGAGACTTGGCAACTCCAGCCTGGCCTACACAGGCATCTTCCTaGACAGCACAACATGGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: AFKSAFVCIRDLATPAWPTQASS*TAQHGV Trigger: CACTCCATGTTGTGCTGTGCAGGAAGATGCCTGTGT...AGGCCAGGCTGGAGTTGCCAAGTCTCTGATACAGACAAAGGCAGACTTGAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAATGCCACATTGGCTTGCCTCTCACAGCTCTCAGAACGAACAATGGTCCAGCGTGGAGAGAGTCCGATaGCATAAAAGGAACAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RMPHWLASHSSQNEQWSSVERVR*HKRNSL Trigger: CAGACTGTTCCTTTTATGTCATCGGACTCTCTCCAC...GCTGGACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAGATACAGAAACTGGCACACAAGAACAATGTGGACTGGATCACTGGAGGTGTTCACAGTCCAGCTCATaGATGGAGAGCCAGGCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: EDTETGTQEQCGLDHWRCSQSSS*MESQAG Trigger: ACCAGCCTGGCTCTCCATCCATGAGCTGGACTGTGA...ACACCTCCAGTGATCCAGTCCACATTGTTCTTGTGTGCCAGTTTCTGTATCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAGAATGCCACATTGGCTTGCCTCTCACAGCTCTCAGAACGAACAATGGTCTGGCCTTGGCTAACCTaGAAGTGCAGGAACAAAACT | + |
|
Preference number: 2 (lower is better) Translates to: TENATLACLSQLSERTMVWPWLT*KCRNKT Trigger: AGTTTTGTTCCTGCACTTCCAGGTTAGCCAAGGCCA...GACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CCA 90 bp | GATATTGAACTTCTGGCCTCTTCCATGCTGACTGAGTCATCGTCCTTCTGTAGGTCTGTATCAGAGACTTaGCAACTCCAGCCTGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: DIELLASSMLTESSSFCRSVSET*QLQPGL Trigger: AAGGCCAGGCTGGAGTTGCCAAGTCTCTGATACAGA...CCTACAGAAGGACGATGACTCAGTCAGCATGGAAGAGGCCAGAAGTTCAATATC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAATGCCACATTGGCTTGCCTCTCACAGCTCTCAGAACGAACAATGGTCCAGCAGCAGAATCACCTTTTaGTCTCACAGTCCAGCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: RMPHWLASHSSQNEQWSSSRITF*SHSPAH Trigger: ATGAGCTGGACTGTGAGACCAAAAGGTGATTCTGCT...GCTGGACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAATGCCACATTGGCTTGCCTCTCACAGCTCTCAGAACGAACAATGGTCCAGCACTATGGGAGTTTTGTaGACTTCTCAGAAGTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: RMPHWLASHSSQNEQWSSTMGVL*TSQKCL Trigger: CAGGCACTTCTGAGAAGTCCACAAAACTCCCATAGT...GCTGGACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGTGTTAATAACATTGACAAAAGTTGGAGTCGAGCGCACCCAGACGCGCATAGAACGAGGCAAGAATaGGCCCGGCAAAAATACACC | + |
|
Preference number: 2 (lower is better) Translates to: TGVNNIDKSWSRAHPDAHRTRQE*ARQKYT Trigger: GGTGTATTTTTGCCGGGCCCATTCTTGCCTCGTTCT...ATGCGCGTCTGGGTGCGCTCGACTCCAACTTTTGTCAATGTTATTAACACCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGTGTTAATAACATTGACAAAAGTTGGAGTCGAGCGCACCCAGACGCGCATGTGGAGAGAGTCCGATaGCATAAAAGGAACAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: TGVNNIDKSWSRAHPDAHVERVR*HKRNSL Trigger: CAGACTGTTCCTTTTATGTCATCGGACTCTCTCCAC...ATGCGCGTCTGGGTGCGCTCGACTCCAACTTTTGTCAATGTTATTAACACCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAATGCCACATTGGCTTGCCTCTCACAGCTCTCAGAACGAACAATGGTCCAGCTGGCTAACCTGGAAGTaGAGGAACAAAACTCAACTA | + |
|
Preference number: 2 (lower is better) Translates to: RMPHWLASHSSQNEQWSSWLTWK*RNKTQL Trigger: TAGTTGAGTTTTGTTCCTGCACTTCCAGGTTAGCCA...GCTGGACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR TCA 90 bp | GATATTGAACTTCTGGCCTCTTCCATGCTGACTGAGTCATCGTCCTTCTGTAGGCAGTGCTTGGCGCTCTaGACACAAAACTGTCAAATT | + |
|
Preference number: 2 (lower is better) Translates to: DIELLASSMLTESSSFCRQCLAL*TQNCQI Trigger: AATTTGACAGTTTTGTGTTCAGAGCGCCAAGCACTG...CCTACAGAAGGACGATGACTCAGTCAGCATGGAAGAGGCCAGAAGTTCAATATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGTGCCACTTGCCAGAGCCTGCAAGTCACCCACTGTGGCTTTGTATATTCGATATTAGGATTAAGTTaGCAACGTCCAGATGTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: SCATCQSLQVTHCGFVYSILGLS*QRPDVH Trigger: GTGAACATCTGGACGTTGCCAACTTAATCCTAATAT...CGAATATACAAAGCCACAGTGGGTGACTTGCAGGCTCTGGCAAGTGGCACAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGTGTTAATAACATTGACAAAAGTTGGAGTCGAGCGCACCCAGACGCGCATACTATGGGAGTTTTGTaGACTTCTCAGAAGTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: TGVNNIDKSWSRAHPDAHTMGVL*TSQKCL Trigger: CAGGCACTTCTGAGAAGTCCACAAAACTCCCATAGT...ATGCGCGTCTGGGTGCGCTCGACTCCAACTTTTGTCAATGTTATTAACACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGAAGATACAGAAACTGGCACACAAGAACAATGTGGACTGGATCACTGGAGCGTCATTGGCATTGCTaGATACTTACCTTAGTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: TGRYRNWHTRTMWTGSLERHWHC*ILTLVP Trigger: TGGGACTAAGGTAAGTATTCAGCAATGCCAATGACG...CTCCAGTGATCCAGTCCACATTGTTCTTGTGTGCCAGTTTCTGTATCTTCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAGATACAGAAACTGGCACACAAGAACAATGTGGACTGGATCACTGGAGGTGTCAGTGCTTGGCGCTCTaGACACAAAACTGTCAAATT | + |
|
Preference number: 2 (lower is better) Translates to: EDTETGTQEQCGLDHWRCQCLAL*TQNCQI Trigger: AATTTGACAGTTTTGTGTTCAGAGCGCCAAGCACTG...ACACCTCCAGTGATCCAGTCCACATTGTTCTTGTGTGCCAGTTTCTGTATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGGTGTTAATAACATTGACAAAAGTTGGAGTCGAGCGCACCCAGACGCGCATTGGCTAACCTGGAAGTaGAGGAACAAAACTCAACTA | + |
|
Preference number: 2 (lower is better) Translates to: TGVNNIDKSWSRAHPDAHWLTWK*RNKTQL Trigger: TAGTTGAGTTTTGTTCCTGCACTTCCAGGTTAGCCA...ATGCGCGTCTGGGTGCGCTCGACTCCAACTTTTGTCAATGTTATTAACACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGGTGTTAATAACATTGACAAAAGTTGGAGTCGAGCGCACCCAGACGCGCATGCAAGCATTCAAGTCTaGCTTTGTCTGTATCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: TGVNNIDKSWSRAHPDAHASIQV*LCLYQR Trigger: TCTCTGATACAGACAAAGGCAGACTTGAATGCTTGC...ATGCGCGTCTGGGTGCGCTCGACTCCAACTTTTGTCAATGTTATTAACACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR GCA 90 bp | GATATTGAACTTCTGGCCTCTTCCATGCTGACTGAGTCATCGTCCTTCTGTAGGGCAAGCATTCAAGTCTaGCTTTGTCTGTATCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: DIELLASSMLTESSSFCRASIQV*LCLYQR Trigger: TCTCTGATACAGACAAAGGCAGACTTGAATGCTTGC...CCTACAGAAGGACGATGACTCAGTCAGCATGGAAGAGGCCAGAAGTTCAATATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAGAATGCCACATTGGCTTGCCTCTCACAGCTCTCAGAACGAACAATGGTCTATCAGTCACTACTTTaGGTTAAGGCATCAAAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: TENATLACLSQLSERTMVYQSLL*VKASKG Trigger: GCCTTTTGATGCCTTAACCCAAAGTAGTGACTGATA...GACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCCCTCATGGGGAAGAAAGGGACCCAGACCCATTACTACAGTAAGTGCGCATATATTAGGATTAAGTTaGCAACGTCCAGATGTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: IPSWGRKGPRPITTVSAHILGLS*QRPDVH Trigger: GTGAACATCTGGACGTTGCCAACTTAATCCTAATAT...ATGCGCACTTACTGTAGTAATGGGTCTGGGTCCCTTTCTTCCCCATGAGGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAAGATACAGAAACTGGCACACAAGAACAATGTGGACTGGATCACTGGAGGAGAGATGTGTTTTGTaGAGAGAGTCCGATGACATA | + |
|
Preference number: 2 (lower is better) Translates to: TGRYRNWHTRTMWTGSLEERCVL*RESDDI Trigger: TATGTCATCGGACTCTCTCCACAAAACACATCTCTC...CTCCAGTGATCCAGTCCACATTGTTCTTGTGTGCCAGTTTCTGTATCTTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGATACAGAAACTGGCACACAAGAACAATGTGGACTGGATCACTGGAGGTGTAGATGTTTCTGCCTCTaGATTCCAAGTGTTAGGATT | + |
|
Preference number: 2 (lower is better) Translates to: EDTETGTQEQCGLDHWRCRCFCL*IPSVRI Trigger: AATCCTAACACTTGGAATGCAGAGGCAGAAACATCT...ACACCTCCAGTGATCCAGTCCACATTGTTCTTGTGTGCCAGTTTCTGTATCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTGTTAATAACATTGACAAAAGTTGGAGTCGAGCGCACCCAGACGCGCATATATTCGGGTACATTTaGCATCTTAAAGAGAACGAG | + |
|
Preference number: 2 (lower is better) Translates to: TGVNNIDKSWSRAHPDAHIFGYI*HLKENE Trigger: CTCGTTCTCTTTAAGATGCCAAATGTACCCGAATAT...ATGCGCGTCTGGGTGCGCTCGACTCCAACTTTTGTCAATGTTATTAACACCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR GCA 72 bp | TCGTCCTTCTGTAGGCGCCAGCTGTGTGGTTTCCTGTaGCACTTGCCAGAGCCTGCAAGTCACCCACTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SSFCRRQLCGFL*HLPEPASHPLW Trigger: CCACAGTGGGTGACTTGCAGGCTCTGGCAAGTGGCACAGGAAACCACACAGCTGGCGCCTACAGAAGGACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR TCA 72 bp | CTCTCAGCCAATCAGCATGCCTCTGACTCCAGGCTCTaGTGCCCACCGAAGGATGCTAGCTACTCTGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LSANQHASDSRL*CPPKDASYSGC Trigger: GCACCCAGAGTAGCTAGCATCCTTCGGTGGGCATCAGAGCCTGGAGTCAGAGGCATGCTGATTGGCTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR TCA 72 bp | GTGGCTGTGGAGGGGATGTGTGGAGGCAGTCCCAGCTaGGCATTTCAGAACTGGAGGGTTCGCCCAAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: VAVEGMCGGSPS*AFQNWRVRPRI Trigger: AATCCTTGGGCGAACCCTCCAGTTCTGAAATGCTCAGCTGGGACTGCCTCCACACATCCCCTCCACAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR CCA 72 bp | AGAACAATGTGGACTGGATCACTGGAGGTGTGGCTGTaGCTGTGGAGGGGATGTGTGGAGGCAGTCCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RTMWTGSLEVWL*LWRGCVEAVPA Trigger: AGCTGGGACTGCCTCCACACATCCCCTCCACAGCCACAGCCACACCTCCAGTGATCCAGTCCACATTGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR GCA 72 bp | TCTGTAGGCGCCAGCTGTGTGGTTTCCTGTGCCACTTaGCAGAGCCTGCAAGTCACCCACTGTGGCTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SVGASCVVSCAT*QSLQVTHCGFV Trigger: TACAAAGCCACAGTGGGTGACTTGCAGGCTCTGGCAAGTGGCACAGGAAACCACACAGCTGGCGCCTACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGGAGGCAGTCCCAGCTGAGCATTTCAGAACTGGAGGGTTCGCCCAAGGATGCCCTCTCCCAGATTaGTACTCTGAGACCCCAATC | + |
|
Preference number: 3 (lower is better) Translates to: CVEAVPAEHFRTGGFAQGCPLPD*YSETPI Trigger: GATTGGGGTCTCAGAGTACAAATCTGGGAGAGGGCA...TCCTTGGGCGAACCCTCCAGTTCTGAAATGCTCAGCTGGGACTGCCTCCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGTGCCACTTGCCAGAGCCTGCAAGTCACCCACTGTGGCTTTGTATATTCGGTCTGTATCAGAGACTaGGCAACTCCAGCCTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SCATCQSLQVTHCGFVYSVCIRD*ATPAWP Trigger: AGGCCAGGCTGGAGTTGCCAAGTCTCTGATACAGAC...CGAATATACAAAGCCACAGTGGGTGACTTGCAGGCTCTGGCAAGTGGCACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCCTCATGGGGAAGAAAGGGACCCAGACCCATTACTACAGTAAGTGCGCATGGGTTCGCCCAAGGATaGACTCAGGGACTGAACCGA | + |
|
Preference number: 3 (lower is better) Translates to: IPSWGRKGPRPITTVSAHGFAQG*TQGLNR Trigger: TCGGTTCAGTCCCTGAGTCAATCCTTGGGCGAACCC...ATGCGCACTTACTGTAGTAATGGGTCTGGGTCCCTTTCTTCCCCATGAGGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR GCA 72 bp | CCAGCTGTGTGGTTTCCTGTGCCACTTGCCAGAGCCTaGAAGTCACCCACTGTGGCTTTGTATATTCGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: PAVWFPVPLARA*KSPTVALYIRV Trigger: TACCCGAATATACAAAGCCACAGTGGGTGACTTGCAGGCTCTGGCAAGTGGCACAGGAAACCACACAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR CCA 72 bp | GCCCGCCGCCCTCACATCACAGGAAGATACAGAAACTaGCACACAAGAACAATGTGGACTGGATCACTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ARRPHITGRYRN*HTRTMWTGSLE Trigger: CTCCAGTGATCCAGTCCACATTGTTCTTGTGTGCCAGTTTCTGTATCTTCCTGTGATGTGAGGGCGGCGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCGTGCCCTCTCCCAGATTTGTACTCTGAGACCCCAATCTCCGGTACCTCAGACAGAGAGATGTGTTTaGTGGAGAGAGTCCGATGAC | + |
|
Preference number: 3 (lower is better) Translates to: SRALSQICTLRPQSPVPQTERCV*WRESDD Trigger: GTCATCGGACTCTCTCCACAAAACACATCTCTCTGT...CTGAGGTACCGGAGATTGGGGTCTCAGAGTACAAATCTGGGAGAGGGCACGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR TCA 72 bp | AGCAGTTGTCACATTGTCTGGCACTCTGGAGGCACGTaGTTTGCCCACATATGCCATGAAACTGGGAAGCGG | + |
|
Preference number: 3 (lower is better) Translates to: SSCHIVWHSGGT*FAHICHETGKR Trigger: CCGCTTCCCAGTTTCATGGCATATGTGGGCAAATCACGTGCCTCCAGAGTGCCAGACAATGTGACAACTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR CCA 72 bp | GAGCAGAATCACCTTTTGGTCTCACAGTCCAGCTCATaGATGGAGAGCCAGGCTGGTAGGCAAGCATTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: EQNHLLVSQSSS*MESQAGRQAFK Trigger: CTTGAATGCTTGCCTACCAGCCTGGCTCTCCATCCATGAGCTGGACTGTGAGACCAAAAGGTGATTCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGGAGGCAGTCCCAGCTGAGCATTTCAGAACTGGAGGGTTCGCCCAAGGACATTCAAGTCTGCCTTaGTCTGTATCAGAGACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: CVEAVPAEHFRTGGFAQGHSSLP*SVSETW Trigger: CCAAGTCTCTGATACAGACAAAGGCAGACTTGAATG...TCCTTGGGCGAACCCTCCAGTTCTGAAATGCTCAGCTGGGACTGCCTCCACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGTGCCACTTGCCAGAGCCTGCAAGTCACCCACTGTGGCTTTGTATATTCGGGGACTATGGGAGTTTaGTGGACTTCTCAGAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SCATCQSLQVTHCGFVYSGTMGV*WTSQKC Trigger: GCACTTCTGAGAAGTCCACAAAACTCCCATAGTCCC...CGAATATACAAAGCCACAGTGGGTGACTTGCAGGCTCTGGCAAGTGGCACAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCCTCATGGGGAAGAAAGGGACCCAGACCCATTACTACAGTAAGTGCGCATGAATGCCACATTGGCTaGCCTCTCACAGCTCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: IPSWGRKGPRPITTVSAHECHIG*PLTALR Trigger: TCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTC...ATGCGCACTTACTGTAGTAATGGGTCTGGGTCCCTTTCTTCCCCATGAGGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCGTGCCCTCTCCCAGATTTGTACTCTGAGACCCCAATCTCCGGTACCTCAGCAGTCCTCTGACAACTaGATATTGAACTTCTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SRALSQICTLRPQSPVPQQSSDN*ILNFWP Trigger: AGGCCAGAAGTTCAATATCAAGTTGTCAGAGGACTG...CTGAGGTACCGGAGATTGGGGTCTCAGAGTACAAATCTGGGAGAGGGCACGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGATACAGAAACTGGCACACAAGAACAATGTGGACTGGATCACTGGAGGTGTGGGTTCGCCCAAGGATaGACTCAGGGACTGAACCGA | + |
|
Preference number: 3 (lower is better) Translates to: EDTETGTQEQCGLDHWRCGFAQG*TQGLNR Trigger: TCGGTTCAGTCCCTGAGTCAATCCTTGGGCGAACCC...ACACCTCCAGTGATCCAGTCCACATTGTTCTTGTGTGCCAGTTTCTGTATCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR TCA 72 bp | GTAAGCCAGGAGCGGATGCCTCGGAGATCAGTCCTCTaGCAACTTGATATTGAACTTCTGGCCTCTTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: VSQERMPRRSVL*QLDIELLASSM Trigger: CATGGAAGAGGCCAGAAGTTCAATATCAAGTTGTCAGAGGACTGATCTCCGAGGCATCCGCTCCTGGCTTAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR GCA 72 bp | CAGGAACAAAACTCAACTAGAACACAGGCATCTTCCTaGACAGCACAACATGGAGTGCTGCTGGCATCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QEQNSTRTQASS*TAQHGVLLASL Trigger: CAGGGATGCCAGCAGCACTCCATGTTGTGCTGTGCAGGAAGATGCCTGTGTTCTAGTTGAGTTTTGTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR CCA 72 bp | AGAGACTTGGCAACTCCAGCCTGGCCTTGGCTAACCTaGAAGTGCAGGAACAAAACTCAACTAGAACACAGG | + |
|
Preference number: 3 (lower is better) Translates to: RDLATPAWPWLT*KCRNKTQLEHR Trigger: CCTGTGTTCTAGTTGAGTTTTGTTCCTGCACTTCCAGGTTAGCCAAGGCCAGGCTGGAGTTGCCAAGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR CCA 72 bp | AGAATCACCTTTTGGTCTCACAGTCCAGCTCATGGATaGAGAGCCAGGCTGGTAGGCAAGCATTCAAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RITFWSHSPAHG*RARLVGKHSSL Trigger: CAGACTTGAATGCTTGCCTACCAGCCTGGCTCTCCATCCATGAGCTGGACTGTGAGACCAAAAGGTGATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCGTGCCCTCTCCCAGATTTGTACTCTGAGACCCCAATCTCCGGTACCTCAGCATATTAGGATTAAGTaGGCAACGTCCAGATGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SRALSQICTLRPQSPVPQHIRIK*ATSRCS Trigger: TGAACATCTGGACGTTGCCAACTTAATCCTAATATG...CTGAGGTACCGGAGATTGGGGTCTCAGAGTACAAATCTGGGAGAGGGCACGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR TCA 72 bp | GACAACTTGATATTGAACTTCTGGCCTCTTCCATGCTaGCTGAGTCATCGTCCTTCTGTAGGCGCCAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: DNLILNFWPLPC*LSHRPSVGASC Trigger: ACAGCTGGCGCCTACAGAAGGACGATGACTCAGTCAGCATGGAAGAGGCCAGAAGTTCAATATCAAGTTGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CAA 90 bp | GATATTGAACTTCTGGCCTCTTCCATGCTGACTGAGTCATCGTCCTTCTGTAGGGAGCAGAATCACCTTTaGGTCTCACAGTCCAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DIELLASSMLTESSSFCREQNHL*VSQSSS Trigger: TGAGCTGGACTGTGAGACCAAAAGGTGATTCTGCTC...CCTACAGAAGGACGATGACTCAGTCAGCATGGAAGAGGCCAGAAGTTCAATATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCCTCATGGGGAAGAAAGGGACCCAGACCCATTACTACAGTAAGTGCGCATCAGTCCTCTGACAACTaGATATTGAACTTCTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: IPSWGRKGPRPITTVSAHQSSDN*ILNFWP Trigger: AGGCCAGAAGTTCAATATCAAGTTGTCAGAGGACTG...ATGCGCACTTACTGTAGTAATGGGTCTGGGTCCCTTTCTTCCCCATGAGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR TCA 72 bp | CAGGGCTTCATGCATGCTAGGCCAGAACTCACTAACTaGGTTATTATCCCCAGCCTCTGGTGTGTCCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: QGFMHARPELTN*VIIPSLWCVLL Trigger: TAAAAGGACACACCAGAGGCTGGGGATAATAACTCAGTTAGTGAGTTCTGGCCTAGCATGCATGAAGCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR GCA 72 bp | GCAAAAATACACCACACAGAGAATGCCACATTGGCTTaGCTCTCACAGCTCTCAGAACGAACAATGGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AKIHHTENATLA*LSQLSERTMVQ Trigger: CTGGACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCTCTGTGTGGTGTATTTTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR CCA 72 bp | AGTCACCCACTGTGGCTTTGTATATTCGGGTACATTTaGCATCTTAAAGAGAACGAGGCAAGAATGGGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: SHPLWLCIFGYI*HLKENEARMGP Trigger: CGGGCCCATTCTTGCCTCGTTCTCTTTAAGATGCCAAATGTACCCGAATATACAAAGCCACAGTGGGTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR CCA 72 bp | TGGTGGTATGTGTTGATACATTCTCCCATCCCCTCATaGGGAAGAAAGGGACCCAGACCCATTACTACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: WWYVLIHSPIPS*GRKGPRPITTV Trigger: TACTGTAGTAATGGGTCTGGGTCCCTTTCTTCCCCATGAGGGGATGGGAGAATGTATCAACACATACCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGTGTTAATAACATTGACAAAAGTTGGAGTCGAGCGCACCCAGACGCGCATCATTCAAGTCTGCCTTaGTCTGTATCAGAGACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TGVNNIDKSWSRAHPDAHHSSLP*SVSETW Trigger: CCAAGTCTCTGATACAGACAAAGGCAGACTTGAATG...ATGCGCGTCTGGGTGCGCTCGACTCCAACTTTTGTCAATGTTATTAACACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CAA 90 bp | GATATTGAACTTCTGGCCTCTTCCATGCTGACTGAGTCATCGTCCTTCTGTAGGTCACCCACTGTGGCTTaGTATATTCGGGTACATTTG | + |
|
Preference number: 3 (lower is better) Translates to: DIELLASSMLTESSSFCRSPTVA*YIRVHL Trigger: CAAATGTACCCGAATATACAAAGCCACAGTGGGTGA...CCTACAGAAGGACGATGACTCAGTCAGCATGGAAGAGGCCAGAAGTTCAATATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR CCA 72 bp | GGTACATTTGGCATCTTAAAGAGAACGAGGCAAGAATaGGCCCGGCAAAAATACACCACACAGAGAATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GTFGILKRTRQE*ARQKYTTQRMP Trigger: TGGCATTCTCTGTGTGGTGTATTTTTGCCGGGCCCATTCTTGCCTCGTTCTCTTTAAGATGCCAAATGTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR GCA 72 bp | GATTTGCCCACATATGCCATGAAACTGGGAAGCGGATaGTTTCCCATATTAGGATTAAGTTGGCAACGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: DLPTYAMKLGSG*FPILGLSWQRP Trigger: TGGACGTTGCCAACTTAATCCTAATATGGGAAAGCATCCGCTTCCCAGTTTCATGGCATATGTGGGCAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR-3UTR CAA 90 bp | GATATTGAACTTCTGGCCTCTTCCATGCTGACTGAGTCATCGTCCTTCTGTAGGCATATTAGGATTAAGTaGGCAACGTCCAGATGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: DIELLASSMLTESSSFCRHIRIK*ATSRCS Trigger: TGAACATCTGGACGTTGCCAACTTAATCCTAATATG...CCTACAGAAGGACGATGACTCAGTCAGCATGGAAGAGGCCAGAAGTTCAATATC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR TCA 72 bp | ATCCGGAAATCTAGCTTGTTTGGGCTCAAAACGCACTaGACCATCAAATCTAGCTTACAGCTATGGTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: IRKSSLFGLKTH*TIKSSLQLWCT Trigger: AGTACACCATAGCTGTAAGCTAGATTTGATGGTTCAGTGCGTTTTGAGCCCAAACAAGCTAGATTTCCGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR GCA 72 bp | TGGATTATACAGTGTTCGGTCAAATCCAGGGCTTCATaGATGCTAGGCCAGAACTCACTAACTGAGTTATTA | + |
|
Preference number: 3 (lower is better) Translates to: WIIQCSVKSRAS*MLGQNSLTELL Trigger: TAATAACTCAGTTAGTGAGTTCTGGCCTAGCATGCATGAAGCCCTGGATTTGACCGAACACTGTATAATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR TCA 90 bp | AGCCGTGCCCTCTCCCAGATTTGTACTCTGAGACCCCAATCTCCGGTACCTCAGGCCAGTAGTCCGTGCTaGCCGCGATACCCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRALSQICTLRPQSPVPQASSPC*PRYPAA Trigger: GGCTGCTGGGTATCGCGGTCAGCACGGACTACTGGC...CTGAGGTACCGGAGATTGGGGTCTCAGAGTACAAATCTGGGAGAGGGCACGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTGAGCCGACACCTGGGGGACTATGGGAGTTTTGTGGACTTCTCAGAAGTGAGATGTCCGAGGGGCTaGGGCCCCGGATCCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLSRHLGDYGSFVDFSEVRCPRG*GPGSRH Trigger: ATGCCTGGATCCGGGGCCGCAGCCCCTCGGACATCT...CACTTCTGAGAAGTCCACAAAACTCCCATAGTCCCCCAGGTGTCGGCTCAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGGAGGCAGTCCCAGCTGAGCATTTCAGAACTGGAGGGTTCGCCCAAGGAGCAGTTGCTCAGACGTaGCCGGTAGAAGCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CVEAVPAEHFRTGGFAQGAVAQT*PVEAWV Trigger: CACCCAGGCTTCTACCGGCCACGTCTGAGCAACTGC...TCCTTGGGCGAACCCTCCAGTTCTGAAATGCTCAGCTGGGACTGCCTCCACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGGAGGCAGTCCCAGCTGAGCATTTCAGAACTGGAGGGTTCGCCCAAGGACGGTGCGGACGGATGTaGCCGATGTTGCTCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: CVEAVPAEHFRTGGFAQGRCGRM*PMLLRI Trigger: TATCCTGAGCAACATCGGGCACATCCGTCCGCACCG...TCCTTGGGCGAACCCTCCAGTTCTGAAATGCTCAGCTGGGACTGCCTCCACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGAGCCGACACCTGGGGGACTATGGGAGTTTTGTGGACTTCTCAGAAGTGGCAGTTGCTCAGACGTaGCCGGTAGAAGCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLSRHLGDYGSFVDFSEVAVAQT*PVEAWV Trigger: CACCCAGGCTTCTACCGGCCACGTCTGAGCAACTGC...CACTTCTGAGAAGTCCACAAAACTCCCATAGTCCCCCAGGTGTCGGCTCAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR CAA 72 bp | TTCTGTAGGCGCCAGCTGTGTGGTTTCCTGTGCCACTaGCCAGAGCCTGCAAGTCACCCACTGTGGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FCRRQLCGFLCH*PEPASHPLWLC Trigger: ACAAAGCCACAGTGGGTGACTTGCAGGCTCTGGCAAGTGGCACAGGAAACCACACAGCTGGCGCCTACAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR TCA 90 bp | AGCCGTGCCCTCTCCCAGATTTGTACTCTGAGACCCCAATCTCCGGTACCTCAGCATAGTCTGGGCACTTaGGCAAAGCTGGGTAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRALSQICTLRPQSPVPQHSLGT*AKLGSC Trigger: GCAACTACCCAGCTTTGCTCAAGTGCCCAGACTATG...CTGAGGTACCGGAGATTGGGGTCTCAGAGTACAAATCTGGGAGAGGGCACGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGATGTGGTCAAGTAACAATGGCTAAGCAGGGAACAGCCTGGGCCTTAGCTGCCAGTATGGTCCGGTaGGGACGGATGTGCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: RRCGQVTMAKQGTAWALAASMVR*GRMCPM Trigger: CATCGGGCACATCCGTCCGCACCGGACCATACTGGC...AGCTAAGGCCCAGGCTGTTCCCTGCTTAGCCATTGTTACTTGACCACATCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR GCA 90 bp | GATATTGAACTTCTGGCCTCTTCCATGCTGACTGAGTCATCGTCCTTCTGTAGGAGATGTCCGAGGGGCTaGGGCCCCGGATCCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DIELLASSMLTESSSFCRRCPRG*GPGSRH Trigger: ATGCCTGGATCCGGGGCCGCAGCCCCTCGGACATCT...CCTACAGAAGGACGATGACTCAGTCAGCATGGAAGAGGCCAGAAGTTCAATATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGAGCCGACACCTGGGGGACTATGGGAGTTTTGTGGACTTCTCAGAAGTGAGACAAAGGCCAGTATaGTCCGGTGCGGACGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QLSRHLGDYGSFVDFSEVRQRPV*SGADGC Trigger: ACATCCGTCCGCACCGGACCATACTGGCCTTTGTCT...CACTTCTGAGAAGTCCACAAAACTCCCATAGTCCCCCAGGTGTCGGCTCAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTCAGAACGAACAATGGTCCAGCTGAGCCGACACCTGGGGGACTATGGGAGCATCTGGTCATAGTCTaGGCACTTGAGCAAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALRTNNGPAEPTPGGLWEHLVIV*ALEQSW Trigger: CCAGCTTTGCTCAAGTGCCCAGACTATGACCAGATG...CTCCCATAGTCCCCCAGGTGTCGGCTCAGCTGGACCATTGTTCGTTCTGAGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR CAA 72 bp | CAGCTCCGAGTTCCCATCAGGGAAGCAGTTGTCACATaGTCTGGCACTCTGGAGGCACGTGATTTGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QLRVPIREAVVT*SGTLEARDLPT Trigger: TGTGGGCAAATCACGTGCCTCCAGAGTGCCAGACAATGTGACAACTGCTTCCCTGATGGGAACTCGGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAGATACAGAAACTGGCACACAAGAACAATGTGGACTGGATCACTGGAGGCCAGTAGTCCGTGCTaGCCGCGATACCCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGRYRNWHTRTMWTGSLEASSPC*PRYPAA Trigger: GGCTGCTGGGTATCGCGGTCAGCACGGACTACTGGC...CTCCAGTGATCCAGTCCACATTGTTCTTGTGTGCCAGTTTCTGTATCTTCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGTGTTAATAACATTGACAAAAGTTGGAGTCGAGCGCACCCAGACGCGCATGCCAGTATGGTCCGGTaGGGACGGATGTGCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TGVNNIDKSWSRAHPDAHASMVR*GRMCPM Trigger: CATCGGGCACATCCGTCCGCACCGGACCATACTGGC...ATGCGCGTCTGGGTGCGCTCGACTCCAACTTTTGTCAATGTTATTAACACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR GCA 90 bp | AGCCGTGCCCTCTCCCAGATTTGTACTCTGAGACCCCAATCTCCGGTACCTCAGGCAAAGCTGGGTAGTTaGTGTTCATCTGTAGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRALSQICTLRPQSPVPQAKLGS*CSSVAR Trigger: CCTCGCTACAGATGAACAGCAACTACCCAGCTTTGC...CTGAGGTACCGGAGATTGGGGTCTCAGAGTACAAATCTGGGAGAGGGCACGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTCAGAACGAACAATGGTCCAGCTGAGCCGACACCTGGGGGACTATGGGAGGGCAGCAAAGGCAAATaGCCATCCATACTTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALRTNNGPAEPTPGGLWEGSKGK*PSILVV Trigger: AACTACAAGTATGGATGGTCATTTGCCTTTGCTGCC...CTCCCATAGTCCCCCAGGTGTCGGCTCAGCTGGACCATTGTTCGTTCTGAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAGAATGCCACATTGGCTTGCCTCTCACAGCTCTCAGAACGAACAATGGTCCGGTGCGGACGGATGTaGCCGATGTTGCTCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: TENATLACLSQLSERTMVRCGRM*PMLLRI Trigger: TATCCTGAGCAACATCGGGCACATCCGTCCGCACCG...GACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCTCTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR GCA 90 bp | AGAACACAGGCATCTTCCTGCACAGCACAACATGGAGTGCTGCTGGCATCCCTGGCAAAGCTGGGTAGTTaGTGTTCATCTGTAGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTQASSCTAQHGVLLASLAKLGS*CSSVAR Trigger: CCTCGCTACAGATGAACAGCAACTACCCAGCTTTGC...CAGGGATGCCAGCAGCACTCCATGTTGTGCTGTGCAGGAAGATGCCTGTGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTCAGAACGAACAATGGTCCAGCTGAGCCGACACCTGGGGGACTATGGGAGTCATCTGGGAGTTCATaGGCATCACATACTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: ALRTNNGPAEPTPGGLWESSGSS*ASHTLW Trigger: CCATAGAGTATGTGATGCCCATGAACTCCCAGATGA...CTCCCATAGTCCCCCAGGTGTCGGCTCAGCTGGACCATTGTTCGTTCTGAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGGAGGCAGTCCCAGCTGAGCATTTCAGAACTGGAGGGTTCGCCCAAGGAGATTCTGACGTCATCTaGGAGTTCATGGGCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: CVEAVPAEHFRTGGFAQGDSDVI*EFMGIT Trigger: TGTGATGCCCATGAACTCCCAGATGACGTCAGAATC...TCCTTGGGCGAACCCTCCAGTTCTGAAATGCTCAGCTGGGACTGCCTCCACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCCTCATGGGGAAGAAAGGGACCCAGACCCATTACTACAGTAAGTGCGCATTGGCCGGTAGAAGCCTaGGTGAGGTCTGTACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: IPSWGRKGPRPITTVSAHWPVEA*VRSVHV Trigger: GACATGTACAGACCTCACCCAGGCTTCTACCGGCCA...ATGCGCACTTACTGTAGTAATGGGTCTGGGTCCCTTTCTTCCCCATGAGGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR CCA 90 bp | GCATTCAAGTCTGCCTTTGTCTGTATCAGAGACTTGGCAACTCCAGCCTGGCCTTGGCCGGTAGAAGCCTaGGTGAGGTCTGTACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: AFKSAFVCIRDLATPAWPWPVEA*VRSVHV Trigger: GACATGTACAGACCTCACCCAGGCTTCTACCGGCCA...AGGCCAGGCTGGAGTTGCCAAGTCTCTGATACAGACAAAGGCAGACTTGAATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR CCA 90 bp | AGCCGTGCCCTCTCCCAGATTTGTACTCTGAGACCCCAATCTCCGGTACCTCAGGCACTTGAGCAAAGCTaGGTAGTTGCTGTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRALSQICTLRPQSPVPQALEQS*VVAVHL Trigger: CAGATGAACAGCAACTACCCAGCTTTGCTCAAGTGC...CTGAGGTACCGGAGATTGGGGTCTCAGAGTACAAATCTGGGAGAGGGCACGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| 3UTR CAA 72 bp | GCTGAGCATTTCAGAACTGGAGGGTTCGCCCAAGGATaGACTCAGGGACTGAACCGACAGGCAAAAGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AEHFRTGGFAQG*TQGLNRQAKVS Trigger: GCTTACTTTTGCCTGTCGGTTCAGTCCCTGAGTCAATCCTTGGGCGAACCCTCCAGTTCTGAAATGCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTGGAGGCAGTCCCAGCTGAGCATTTCAGAACTGGAGGGTTCGCCCAAGGACAGTGTACCTCTTCATaGACAGGTACACAGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: CVEAVPAEHFRTGGFAQGQCTSS*TGTQTS Trigger: TGATGTCTGTGTACCTGTTCATGAAGAGGTACACTG...TCCTTGGGCGAACCCTCCAGTTCTGAAATGCTCAGCTGGGACTGCCTCCACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
||
| CDS-3UTR TCA 90 bp | AGAATGCCACATTGGCTTGCCTCTCACAGCTCTCAGAACGAACAATGGTCCAGCCATAGTCTGGGCACTTaGGCAAAGCTGGGTAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RMPHWLASHSSQNEQWSSHSLGT*AKLGSC Trigger: GCAACTACCCAGCTTTGCTCAAGTGCCCAGACTATG...GCTGGACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR GCA 90 bp | AGAAGATGTGGTCAAGTAACAATGGCTAAGCAGGGAACAGCCTGGGCCTTAGCTAGTAATCGGAGCAGTTaGTCAGACGTGGCCGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: RRCGQVTMAKQGTAWALASNRSS*SDVAGR Trigger: TCTACCGGCCACGTCTGAGCAACTGCTCCGATTACT...AGCTAAGGCCCAGGCTGTTCCCTGCTTAGCCATTGTTACTTGACCACATCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR CCA 90 bp | GATATTGAACTTCTGGCCTCTTCCATGCTGACTGAGTCATCGTCCTTCTGTAGGAGACAAAGGCCAGTATaGTCCGGTGCGGACGGATGT | + |
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Preference number: 4 (lower is better) Translates to: DIELLASSMLTESSSFCRRQRPV*SGADGC Trigger: ACATCCGTCCGCACCGGACCATACTGGCCTTTGTCT...CCTACAGAAGGACGATGACTCAGTCAGCATGGAAGAGGCCAGAAGTTCAATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CAA 72 bp | CAAGCATTCAAGTCTGCCTTTGTCTGTATCAGAGACTaGGCAACTCCAGCCTGGCCTTGGCTAACCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: QAFKSAFVCIRD*ATPAWPWLTWK Trigger: CTTCCAGGTTAGCCAAGGCCAGGCTGGAGTTGCCAAGTCTCTGATACAGACAAAGGCAGACTTGAATGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CAA 72 bp | GGCCCGGCAAAAATACACCACACAGAGAATGCCACATaGGCTTGCCTCTCACAGCTCTCAGAACGAACAATG | + |
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Preference number: 4 (lower is better) Translates to: GPAKIHHTENAT*ACLSQLSERTM Trigger: CATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCTCTGTGTGGTGTATTTTTGCCGGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR TCA 90 bp | GCTCTCAGAACGAACAATGGTCCAGCTGAGCCGACACCTGGGGGACTATGGGAGTCATTTTTAGAACATTaGCAGTGGATTCTGACGTCA | + |
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Preference number: 4 (lower is better) Translates to: ALRTNNGPAEPTPGGLWESFLEH*QWILTS Trigger: TGACGTCAGAATCCACTGTCAATGTTCTAAAAATGA...CTCCCATAGTCCCCCAGGTGTCGGCTCAGCTGGACCATTGTTCGTTCTGAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR CCA 90 bp | ATCCCCTCATGGGGAAGAAAGGGACCCAGACCCATTACTACAGTAAGTGCGCATTGTGCTCTGGTTCTGTaGGAGGATTATGCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: IPSWGRKGPRPITTVSAHCALVL*EDYAFF Trigger: GAAGAAGGCATAATCCTCCCACAGAACCAGAGCACA...ATGCGCACTTACTGTAGTAATGGGTCTGGGTCCCTTTCTTCCCCATGAGGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR TCA 90 bp | AGCCGTGCCCTCTCCCAGATTTGTACTCTGAGACCCCAATCTCCGGTACCTCAGTCATTTTTAGAACATTaGCAGTGGATTCTGACGTCA | + |
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Preference number: 4 (lower is better) Translates to: SRALSQICTLRPQSPVPQSFLEH*QWILTS Trigger: TGACGTCAGAATCCACTGTCAATGTTCTAAAAATGA...CTGAGGTACCGGAGATTGGGGTCTCAGAGTACAAATCTGGGAGAGGGCACGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR CCA 90 bp | AGAAGATGTGGTCAAGTAACAATGGCTAAGCAGGGAACAGCCTGGGCCTTAGCTTGTGCTCTGGTTCTGTaGGAGGATTATGCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RRCGQVTMAKQGTAWALACALVL*EDYAFF Trigger: GAAGAAGGCATAATCCTCCCACAGAACCAGAGCACA...AGCTAAGGCCCAGGCTGTTCCCTGCTTAGCCATTGTTACTTGACCACATCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR CCA 90 bp | ACAGAGAATGCCACATTGGCTTGCCTCTCACAGCTCTCAGAACGAACAATGGTCGCACTTGAGCAAAGCTaGGTAGTTGCTGTTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: TENATLACLSQLSERTMVALEQS*VVAVHL Trigger: CAGATGAACAGCAACTACCCAGCTTTGCTCAAGTGC...GACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| 3UTR CAA 72 bp | GGCAAAAATACACCACACAGAGAATGCCACATTGGCTaGCCTCTCACAGCTCTCAGAACGAACAATGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GKNTPHRECHIG*PLTALRTNNGP Trigger: TGGACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCTCTGTGTGGTGTATTTTTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR CCA 90 bp | ATCCCCTCATGGGGAAGAAAGGGACCCAGACCCATTACTACAGTAAGTGCGCATTTAAAAGGAAGGAGATaGCAGCAAAGGCAAATGACC | + |
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Preference number: 4 (lower is better) Translates to: IPSWGRKGPRPITTVSAHLKGRR*QQRQMT Trigger: GGTCATTTGCCTTTGCTGCCATCTCCTTCCTTTTAA...ATGCGCACTTACTGTAGTAATGGGTCTGGGTCCCTTTCTTCCCCATGAGGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR CCA 90 bp | GAAGATACAGAAACTGGCACACAAGAACAATGTGGACTGGATCACTGGAGGTGTCATCTGGTCATAGTCTaGGCACTTGAGCAAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: EDTETGTQEQCGLDHWRCHLVIV*ALEQSW Trigger: CCAGCTTTGCTCAAGTGCCCAGACTATGACCAGATG...ACACCTCCAGTGATCCAGTCCACATTGTTCTTGTGTGCCAGTTTCTGTATCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR TCA 90 bp | GATATTGAACTTCTGGCCTCTTCCATGCTGACTGAGTCATCGTCCTTCTGTAGGGGCAGCAAAGGCAAATaGCCATCCATACTTGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: DIELLASSMLTESSSFCRGSKGK*PSILVV Trigger: AACTACAAGTATGGATGGTCATTTGCCTTTGCTGCC...CCTACAGAAGGACGATGACTCAGTCAGCATGGAAGAGGCCAGAAGTTCAATATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR CCA 90 bp | ACAGAGAATGCCACATTGGCTTGCCTCTCACAGCTCTCAGAACGAACAATGGTCTTAAAAGGAAGGAGATaGCAGCAAAGGCAAATGACC | + |
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Preference number: 4 (lower is better) Translates to: TENATLACLSQLSERTMVLKGRR*QQRQMT Trigger: GGTCATTTGCCTTTGCTGCCATCTCCTTCCTTTTAA...GACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR CCA 90 bp | ACAGGAAGATACAGAAACTGGCACACAAGAACAATGTGGACTGGATCACTGGAGTCATCTGGGAGTTCATaGGCATCACATACTCTATGG | + |
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Preference number: 4 (lower is better) Translates to: TGRYRNWHTRTMWTGSLESSGSS*ASHTLW Trigger: CCATAGAGTATGTGATGCCCATGAACTCCCAGATGA...CTCCAGTGATCCAGTCCACATTGTTCTTGTGTGCCAGTTTCTGTATCTTCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR TCA 90 bp | ACAGGAAGATACAGAAACTGGCACACAAGAACAATGTGGACTGGATCACTGGAGATCCATACTTGTAGTTaGAATAGGTCTCTGCATCCT | + |
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Preference number: 4 (lower is better) Translates to: TGRYRNWHTRTMWTGSLEIHTCS*NRSLHP Trigger: AGGATGCAGAGACCTATTTCAACTACAAGTATGGAT...CTCCAGTGATCCAGTCCACATTGTTCTTGTGTGCCAGTTTCTGTATCTTCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS GCA 90 bp | TCCAGGCATCTGGATGTAGAAACTGGCCAGAGTAATCGGAGCAGTTaGTCAGACGTGGCCGGTAGAAGCCTGGGTGAGGTCTGTACATGT | + |
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Preference number: 5 (lower is better) Translates to: SRHLDVETGQSNRSS*SDVAGRSLGEVCTC Trigger: ACATGTACAGACCTCACCCAGGCTTCTACCGGCCACGTCTGAGCAACTGCTCCGATTACTCTGGCCAGTTTCTACATCCAGATGCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS CCA 90 bp | GCCAGAGTAATCGGAGCAGTTGCTCAGACGTGGCCGGTAGAAGCCTaGGTGAGGTCTGTACATGTCCTCAGCAGTGTACCTCTTCATGAA | + |
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Preference number: 5 (lower is better) Translates to: ARVIGAVAQTWPVEA*VRSVHVLSSVPLHE Trigger: TTCATGAAGAGGTACACTGCTGAGGACATGTACAGACCTCACCCAGGCTTCTACCGGCCACGTCTGAGCAACTGCTCCGATTACTCTGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR CAA 90 bp | GCTCTCAGAACGAACAATGGTCCAGCTGAGCCGACACCTGGGGGACTATGGGAGGCATCCTTGGTTCTGTaGAGCATCTCGTCATTGATG | + |
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Preference number: 5 (lower is better) Translates to: ALRTNNGPAEPTPGGLWEASLVL*SISSLM Trigger: CATCAATGACGAGATGCTCAACAGAACCAAGGATGC...CTCCCATAGTCCCCCAGGTGTCGGCTCAGCTGGACCATTGTTCGTTCTGAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR CAA 90 bp | ATCCCCTCATGGGGAAGAAAGGGACCCAGACCCATTACTACAGTAAGTGCGCATCGGATGTGCCCGATGTaGCTCAGGATAAACCCAATG | + |
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Preference number: 5 (lower is better) Translates to: IPSWGRKGPRPITTVSAHRMCPM*LRINPM Trigger: CATTGGGTTTATCCTGAGCAACATCGGGCACATCCG...ATGCGCACTTACTGTAGTAATGGGTCTGGGTCCCTTTCTTCCCCATGAGGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS TCA 90 bp | AGCCTGGGTGAGGTCTGTACATGTCCTCAGCAGTGTACCTCTTCATaGACAGGTACACAGACATCACCCCAGCACTCTCTGTTAAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: SLGEVCTCPQQCTSS*TGTQTSPQHSLLKG Trigger: TCCTTTTAACAGAGAGTGCTGGGGTGATGTCTGTGTACCTGTTCATGAAGAGGTACACTGCTGAGGACATGTACAGACCTCACCCAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR CAA 90 bp | GAAGATACAGAAACTGGCACACAAGAACAATGTGGACTGGATCACTGGAGGTGTCGGATGTGCCCGATGTaGCTCAGGATAAACCCAATG | + |
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Preference number: 5 (lower is better) Translates to: EDTETGTQEQCGLDHWRCRMCPM*LRINPM Trigger: CATTGGGTTTATCCTGAGCAACATCGGGCACATCCG...ACACCTCCAGTGATCCAGTCCACATTGTTCTTGTGTGCCAGTTTCTGTATCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR CAA 90 bp | ACAGAGAATGCCACATTGGCTTGCCTCTCACAGCTCTCAGAACGAACAATGGTCTTGAGCATCTCGTCATaGATGCTGGAGATGTACAGC | + |
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Preference number: 5 (lower is better) Translates to: TENATLACLSQLSERTMVLSISS*MLEMYS Trigger: GCTGTACATCTCCAGCATCAATGACGAGATGCTCAA...GACCATTGTTCGTTCTGAGAGCTGTGAGAGGCAAGCCAATGTGGCATTCTCTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR CAA 90 bp | AGAACACAGGCATCTTCCTGCACAGCACAACATGGAGTGCTGCTGGCATCCCTGATCATTTTTAGAACATaGACAGTGGATTCTGACGTC | + |
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Preference number: 5 (lower is better) Translates to: RTQASSCTAQHGVLLASLIIFRT*TVDSDV Trigger: GACGTCAGAATCCACTGTCAATGTTCTAAAAATGAT...CAGGGATGCCAGCAGCACTCCATGTTGTGCTGTGCAGGAAGATGCCTGTGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR CAA 90 bp | ACAGGTGTTAATAACATTGACAAAAGTTGGAGTCGAGCGCACCCAGACGCGCATGCATCCTTGGTTCTGTaGAGCATCTCGTCATTGATG | + |
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Preference number: 5 (lower is better) Translates to: TGVNNIDKSWSRAHPDAHASLVL*SISSLM Trigger: CATCAATGACGAGATGCTCAACAGAACCAAGGATGC...ATGCGCGTCTGGGTGCGCTCGACTCCAACTTTTGTCAATGTTATTAACACCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS-3UTR CAA 90 bp | TCCTGTGCCACTTGCCAGAGCCTGCAAGTCACCCACTGTGGCTTTGTATATTCGATCATTTTTAGAACATaGACAGTGGATTCTGACGTC | + |
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Preference number: 5 (lower is better) Translates to: SCATCQSLQVTHCGFVYSIIFRT*TVDSDV Trigger: GACGTCAGAATCCACTGTCAATGTTCTAAAAATGAT...CGAATATACAAAGCCACAGTGGGTGACTTGCAGGCTCTGGCAAGTGGCACAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS CCA 72 bp | CTGGGTAGTTGCTGTTCATCTGTAGCGAGGCGTCGCTaGAGATGTCCGAGGGGCTGCGGCCCCGGATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LGSCCSSVARRR*RCPRGCGPGSR Trigger: CCTGGATCCGGGGCCGCAGCCCCTCGGACATCTCCAGCGACGCCTCGCTACAGATGAACAGCAACTACCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS GCA 72 bp | CTGGATGTAGAAACTGGCCAGAGTAATCGGAGCAGTTaGTCAGACGTGGCCGGTAGAAGCCTGGGTGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: LDVETGQSNRSS*SDVAGRSLGEV Trigger: GACCTCACCCAGGCTTCTACCGGCCACGTCTGAGCAACTGCTCCGATTACTCTGGCCAGTTTCTACATCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS CCA 72 bp | ATCGGAGCAGTTGCTCAGACGTGGCCGGTAGAAGCCTaGGTGAGGTCTGTACATGTCCTCAGCAGTGTACCT | + |
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Preference number: 6 (lower is better) Translates to: IGAVAQTWPVEA*VRSVHVLSSVP Trigger: AGGTACACTGCTGAGGACATGTACAGACCTCACCCAGGCTTCTACCGGCCACGTCTGAGCAACTGCTCCGAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS CCA 72 bp | AAACTGGCCAGAGTAATCGGAGCAGTTGCTCAGACGTaGCCGGTAGAAGCCTGGGTGAGGTCTGTACATGTC | + |
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Preference number: 6 (lower is better) Translates to: KLARVIGAVAQT*PVEAWVRSVHV Trigger: GACATGTACAGACCTCACCCAGGCTTCTACCGGCCACGTCTGAGCAACTGCTCCGATTACTCTGGCCAGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS CAA 72 bp | GCCAGTATGGTCCGGTGCGGACGGATGTGCCCGATGTaGCTCAGGATAAACCCAATGAACATGAAGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: ASMVRCGRMCPM*LRINPMNMKKR Trigger: CCTCTTCTTCATGTTCATTGGGTTTATCCTGAGCAACATCGGGCACATCCGTCCGCACCGGACCATACTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS TCA 72 bp | GAGGTCTGTACATGTCCTCAGCAGTGTACCTCTTCATaGACAGGTACACAGACATCACCCCAGCACTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: EVCTCPQQCTSS*TGTQTSPQHSL Trigger: CAGAGAGTGCTGGGGTGATGTCTGTGTACCTGTTCATGAAGAGGTACACTGCTGAGGACATGTACAGACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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| CDS CCA 72 bp | ACATCACCCCAGCACTCTCTGTTAAAAGGAAGGAGATaGCAGCAAAGGCAAATGACCATCCATACTTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: TSPQHSLLKGRR*QQRQMTIHTCS Trigger: ACTACAAGTATGGATGGTCATTTGCCTTTGCTGCCATCTCCTTCCTTTTAACAGAGAGTGCTGGGGTGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039071.3 ENSMUST00000106742.8 |
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