Pregenerated sensors for CACNG4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020723Ensembl transcript IDs: ENSMUST00000021066.4
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAACATCTGGGCAGGAAACAGTCGATGGGAGGCCAGAGGTCCCAGTaGCCGGAAGAAGCCTCCCTGTGGCCCAGTGCCCAGCGAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: EHLGRKQSMGGQRSQ*PEEASLWPSAQRGR Trigger: CCTCCCTCGCTGGGCACTGGGCCACAGGGAGGCTTCTTCCGGGCACTGGGACCTCTGGCCTCCCATCGACTGTTTCCTGCCCAGATGTTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR GCA 90 bp | AGGCCAGAGGTCCCAGTGCCCGGAAGAAGCCTCCCTGTGGCCCAGTaGCCAGCGAGGGAGGATGCGTTTGACATCTGGCATGACTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: RPEVPVPGRSLPVAQ*PAREDAFDIWHDWF Trigger: AAACCAGTCATGCCAGATGTCAAACGCATCCTCCCTCGCTGGGCACTGGGCCACAGGGAGGCTTCTTCCGGGCACTGGGACCTCTGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CCA 90 bp | TGGGAGTATGGCTCCGTGCCCCAGCAGGGCCCTCAGGGGACAGAGTaGTTCCTCAGGCCAGTGTGGAAGGACAGAGTCAAAGGCCACATG | + |
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Preference number: 1 (lower is better) Translates to: WEYGSVPQQGPQGTE*FLRPVWKDRVKGHM Trigger: CATGTGGCCTTTGACTCTGTCCTTCCACACTGGCCTGAGGAACCACTCTGTCCCCTGAGGGCCCTGCTGGGGCACGGAGCCATACTCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR GCA 90 bp | ACATCTGTGTCAGAACACCAGGTTGGAAGTGGGAGTATGGCTCCGTaGCCCAGCAGGGCCCTCAGGGGACAGAGTGGTTCCTCAGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: TSVSEHQVGSGSMAP*PSRALRGQSGSSGQ Trigger: CTGGCCTGAGGAACCACTCTGTCCCCTGAGGGCCCTGCTGGGGCACGGAGCCATACTCCCACTTCCAACCTGGTGTTCTGACACAGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CCA 90 bp | TGTCTCAGCTCACCATCTCATAGGCAACCGGCTGGAGCTAGGATATaGGTTGTCTTCTTCCGGTGGTGGGGCGGGGGCAGGAAAGGACAG | + |
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Preference number: 1 (lower is better) Translates to: CLSSPSHRQPAGARI*VVFFRWWGGGRKGQ Trigger: CTGTCCTTTCCTGCCCCCGCCCCACCACCGGAAGAAGACAACCCATATCCTAGCTCCAGCCGGTTGCCTATGAGATGGTGAGCTGAGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CCA 90 bp | AAGCTTGTACATCTGTGTCAGAACACCAGGTTGGAAGTGGGAGTATaGCTCCGTGCCCCAGCAGGGCCCTCAGGGGACAGAGTGGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: KLVHLCQNTRLEVGV*LRAPAGPSGDRVVP Trigger: AGGAACCACTCTGTCCCCTGAGGGCCCTGCTGGGGCACGGAGCCATACTCCCACTTCCAACCTGGTGTTCTGACACAGATGTACAAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR TCA 90 bp | GTAGGCAGGGAGAGGGCCTGCAGCAGGGACAGACCACACATGTCTTaGCATTGGCGCTCATTTGCGGCACATGCTTGGACACATACTGAG | + |
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Preference number: 1 (lower is better) Translates to: VGRERACSRDRPHMS*HWRSFAAHAWTHTE Trigger: CTCAGTATGTGTCCAAGCATGTGCCGCAAATGAGCGCCAATGTCAAGACATGTGTGGTCTGTCCCTGCTGCAGGCCCTCTCCCTGCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR GCA 90 bp | AGTGGTTCCTCAGGCCAGTGTGGAAGGACAGAGTCAAAGGCCACATaGCCACCATCCCTCAGATCCGTGAAACCCTCTGGACCTCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: SGSSGQCGRTESKAT*PPSLRSVKPSGPPR Trigger: TCTTGGAGGTCCAGAGGGTTTCACGGATCTGAGGGATGGTGGGCATGTGGCCTTTGACTCTGTCCTTCCACACTGGCCTGAGGAACCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR TCA 90 bp | GTTTCTACCTTATCCCTGATTCCAATCTCCAGACTCCCCTCACTCTaGGCTAGCCCATGGCGTCTTCTGGAGGCCAGGGAGGATCGCACT | + |
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Preference number: 1 (lower is better) Translates to: VSTLSLIPISRLPSL*ASPWRLLEAREDRT Trigger: AGTGCGATCCTCCCTGGCCTCCAGAAGACGCCATGGGCTAGCTCAGAGTGAGGGGAGTCTGGAGATTGGAATCAGGGATAAGGTAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR TCA 90 bp | AGCCTACCTCGGGAGAAAGTCAGCCTTCTGTTTCTACCTTATCCCTaGTTCCAATCTCCAGACTCCCCTCACTCTGAGCTAGCCCATGGC | + |
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Preference number: 1 (lower is better) Translates to: SLPREKVSLLFLPYP*FQSPDSPHSELAHG Trigger: GCCATGGGCTAGCTCAGAGTGAGGGGAGTCTGGAGATTGGAATCAGGGATAAGGTAGAAACAGAAGGCTGACTTTCTCCCGAGGTAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR TCA 90 bp | AGGCCGAAGCACCAGTTAGCCATAGAGCTTTCTCTTCAGAATGGGTaGTATTTACAACCACCAGCTCCACCAGGGGGCCAGACAGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: RPKHQLAIELSLQNG*YLQPPAPPGGQTEA Trigger: AGCCTCTGTCTGGCCCCCTGGTGGAGCTGGTGGTTGTAAATATCACCCATTCTGAAGAGAAAGCTCTATGGCTAACTGGTGCTTCGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CCA 90 bp | CTCGAGGCCGAAGCACCAGTTAGCCATAGAGCTTTCTCTTCAGAATaGGTGATATTTACAACCACCAGCTCCACCAGGGGGCCAGACAGA | + |
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Preference number: 1 (lower is better) Translates to: LEAEAPVSHRAFSSE*VIFTTTSSTRGPDR Trigger: TCTGTCTGGCCCCCTGGTGGAGCTGGTGGTTGTAAATATCACCCATTCTGAAGAGAAAGCTCTATGGCTAACTGGTGCTTCGGCCTCGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR TCA 90 bp | CCAAGAGGCAGGCTGATGCAGCTTCTTGAAAATTCTTGGGCCTCTTaGGAAGTTCCAAAAACCCAGAGGGCAGCAGAACAGCCTACCTCG | + |
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Preference number: 1 (lower is better) Translates to: PRGRLMQLLENSWAS*EVPKTQRAAEQPTS Trigger: CGAGGTAGGCTGTTCTGCTGCCCTCTGGGTTTTTGGAACTTCTCAAGAGGCCCAAGAATTTTCAAGAAGCTGCATCAGCCTGCCTCTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR TCA 90 bp | TGTCCTGTACATTCTGAGCTCAGCGGAAACTTCCAGAAGCAGGTATaGAAGCCAGCAGAGCCTCCGAATTTGCCCTGGTTTCCTGATCTC | + |
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Preference number: 1 (lower is better) Translates to: CPVHSELSGNFQKQV*KPAEPPNLPWFPDL Trigger: GAGATCAGGAAACCAGGGCAAATTCGGAGGCTCTGCTGGCTTTCATACCTGCTTCTGGAAGTTTCCGCTGAGCTCAGAATGTACAGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CCA 90 bp | GTCAAAGGCCACATGCCCACCATCCCTCAGATCCGTGAAACCCTCTaGACCTCCAAGATTAGTCAGTATGTCCTGTACATTCTGAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: VKGHMPTIPQIRETL*TSKISQYVLYILSS Trigger: TGAGCTCAGAATGTACAGGACATACTGACTAATCTTGGAGGTCCAGAGGGTTTCACGGATCTGAGGGATGGTGGGCATGTGGCCTTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CCA 90 bp | CACAGAACACATTCTTGGATTCAGGCAAAGACAGAAAGCCCAGCATaGCACCTTGAGTCAAATGCTCACCGAGTCCTGGTGTGGGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: HRTHSWIQAKTESPA*HLESNAHRVLVWAE Trigger: TTCTGCCCACACCAGGACTCGGTGAGCATTTGACTCAAGGTGCCATGCTGGGCTTTCTGTCTTTGCCTGAATCCAAGAATGTGTTCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR GCA 90 bp | GGAATCATGGAAACTTCTGGGACCACAGTTGGGATGGTGGTAGCTTaGATGGAAGTTTACCACAGGCTGCTGCTCTATTGCCAGAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: GIMETSGTTVGMVVA*MEVYHRLLLYCQKR Trigger: TCTCTTCTGGCAATAGAGCAGCAGCCTGTGGTAAACTTCCATGCAAGCTACCACCATCCCAACTGTGGTCCCAGAAGTTTCCATGATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR TCA 90 bp | ATGACTGGTTTCTTGGTTCCCAAGAGGCAGGCTGATGCAGCTTCTTaGAAATTCTTGGGCCTCTTGAGAAGTTCCAAAAACCCAGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: MTGFLVPKRQADAAS*KFLGLLRSSKNPEG Trigger: GCCCTCTGGGTTTTTGGAACTTCTCAAGAGGCCCAAGAATTTTCAAGAAGCTGCATCAGCCTGCCTCTTGGGAACCAAGAAACCAGTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR TCA 90 bp | AAACCCTCTGGACCTCCAAGATTAGTCAGTATGTCCTGTACATTCTaGGCTCAGCGGAAACTTCCAGAAGCAGGTATGAAAGCCAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: KPSGPPRLVSMSCTF*AQRKLPEAGMKASR Trigger: TCTGCTGGCTTTCATACCTGCTTCTGGAAGTTTCCGCTGAGCTCAGAATGTACAGGACATACTGACTAATCTTGGAGGTCCAGAGGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CCA 90 bp | GGAGGTGGTGTTGCTCTTTTTCAGGATAAAGAGGTGAGTACAGCTTaGTCTTCTGACGATGTTCTTCAGTATGCCACCCTCATAACCACT | + |
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Preference number: 1 (lower is better) Translates to: GGGVALFQDKEVSTA*SSDDVLQYATLITT Trigger: AGTGGTTATGAGGGTGGCATACTGAAGAACATCGTCAGAAGACCAAGCTGTACTCACCTCTTTATCCTGAAAAAGAGCAACACCACCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CCA 90 bp | AGTTTCACTTTCTGGAGAGTTCTTTCGAACCTGGACACACTCATCTaGTTATTTATTTATTTTTCGTCCGCCTTGAGGAAGAGGGGGATT | + |
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Preference number: 1 (lower is better) Translates to: SFTFWRVLSNLDTLI*LFIYFSSALRKRGI Trigger: AATCCCCCTCTTCCTCAAGGCGGACGAAAAATAAATAAATAACCAGATGAGTGTGTCCAGGTTCGAAAGAACTCTCCAGAAAGTGAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CCA 90 bp | TTAGAAAGCACGCGTGTTATAGAAAAGAGGGTGAGTTTCACTTTCTaGAGAGTTCTTTCGAACCTGGACACACTCATCTGGTTATTTATT | + |
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Preference number: 1 (lower is better) Translates to: LESTRVIEKRVSFTF*RVLSNLDTLIWLFI Trigger: AATAAATAACCAGATGAGTGTGTCCAGGTTCGAAAGAACTCTCCAGAAAGTGAAACTCACCCTCTTTTCTATAACACGCGTGCTTTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CCA 90 bp | TGGTCTTCTGACGATGTTCTTCAGTATGCCACCCTCATAACCACTTaGAAAATGATGCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: WSSDDVLQYATLITT*KMMLFLSFFLSFFL Trigger: AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGCATCATTTTCCAAGTGGTTATGAGGGTGGCATACTGAAGAACATCGTCAGAAGACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR CCA 90 bp | CTCCGTGCCCCAGCAGGGCCCTCAGGGGACAGAGTGGTTCCTCAGGCCAGTGTGGCCCATGGCGTCTTCTaGAGGCCAGGGAGGATCGCA | + |
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Preference number: 2 (lower is better) Translates to: LRAPAGPSGDRVVPQASVAHGVF*RPGRIA Trigger: TGCGATCCTCCCTGGCCTCCAGAAGACGCCATGGGC...CACACTGGCCTGAGGAACCACTCTGTCCCCTGAGGGCCCTGCTGGGGCACGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTGGGAGTATGGCTCCGTGCCCCAGCAGGGCCCTCAGGGGACAGAGTGGTCCTGATCTCCTGAGGTaGAGAGCAGCAGGCCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GSGSMAPCPSRALRGQSGPDLLR*RAAGPR Trigger: CCTGGGGCCTGCTGCTCTCCACCTCAGGAGATCAGG...ACCACTCTGTCCCCTGAGGGCCCTGCTGGGGCACGGAGCCATACTCCCACTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR TCA 90 bp | GTGAGGCCGGCAGTCAGCAGGAGGAAGGTTGCAAGGGCTGGGGCCACTGAGGCCCATCCCTCAGATCCGTaGAACCCTCTGGACCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: VRPAVSRRKVARAGATEAHPSDP*NPLDLQ Trigger: TTGGAGGTCCAGAGGGTTTCACGGATCTGAGGGATG...GGCCTCAGTGGCCCCAGCCCTTGCAACCTTCCTCCTGCTGACTGCCGGCCTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR CCA 90 bp | AGAACACCAGGTTGGAAGTGGGAGTATGGCTCCGTGCCCCAGCAGGGCCCTCAGGCAGGAAACAGTCGATaGGAGGCCAGAGGTCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: RTPGWKWEYGSVPQQGPQAGNSR*EARGPS Trigger: ACTGGGACCTCTGGCCTCCCATCGACTGTTTCCTGC...CTGAGGGCCCTGCTGGGGCACGGAGCCATACTCCCACTTCCAACCTGGTGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR GCA 90 bp | TTGTCTCATAGGGAGAGCAAAGCTGGAGACCAAGTTCTCCAGAGTGAGGCCGGCGGCCAGAGGTCCCAGTaGCCGGAAGAAGCCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: LSHRESKAGDQVLQSEAGGQRSQ*PEEASL Trigger: CAGGGAGGCTTCTTCCGGGCACTGGGACCTCTGGCC...GCCGGCCTCACTCTGGAGAACTTGGTCTCCAGCTTTGCTCTCCCTATGAGACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR GCA 90 bp | GGCCGGCAGTCAGCAGGAGGAAGGTTGCAAGGGCTGGGGCCACTGAGGCCTTCTACATTGGCGCTCATTTaGGGCACATGCTTGGACACA | + |
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Preference number: 2 (lower is better) Translates to: GRQSAGGRLQGLGPLRPSTLALI*GTCLDT Trigger: TGTGTCCAAGCATGTGCCGCAAATGAGCGCCAATGT...AGAAGGCCTCAGTGGCCCCAGCCCTTGCAACCTTCCTCCTGCTGACTGCCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR CCA 90 bp | GGCCGGCAGTCAGCAGGAGGAAGGTTGCAAGGGCTGGGGCCACTGAGGCCTTCTTTCTGGGACCACAGTTaGGATGGTGGTAGCTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: GRQSAGGRLQGLGPLRPSFWDHS*DGGSLH Trigger: ATGCAAGCTACCACCATCCCAACTGTGGTCCCAGAA...AGAAGGCCTCAGTGGCCCCAGCCCTTGCAACCTTCCTCCTGCTGACTGCCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR CCA 90 bp | TACAACCACCAGCTCCACCAGGGGGCCAGACAGAGGCTGAGGGAGACACAGAGGGGACACAGGAACATCTaGGCAGGAAACAGTCGATGG | + |
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Preference number: 2 (lower is better) Translates to: YNHQLHQGARQRLRETQRGHRNI*AGNSRW Trigger: CCATCGACTGTTTCCTGCCCAGATGTTCCTGTGTCC...CCTCTGTGTCTCCCTCAGCCTCTGTCTGGCCCCCTGGTGGAGCTGGTGGTTGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGCAAAGCTGGAGACCAAGTTCTCCAGAGTGAGGCCGGCAGTCAGCAGGAGGCTCCTTCTTGGTCCCTaGAGTGGGCCTGTGCACTCT | + |
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Preference number: 2 (lower is better) Translates to: RAKLETKFSRVRPAVSRRLLLGP*SGPVHS Trigger: AGAGTGCACAGGCCCACTCCAGGGACCAAGAAGGAG...CCTCCTGCTGACTGCCGGCCTCACTCTGGAGAACTTGGTCTCCAGCTTTGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR TCA 90 bp | GGAAGTGGGAGTATGGCTCCGTGCCCCAGCAGGGCCCTCAGGGGACAGAGTGGTTTTCTACCTTATCCCTaGTTCCAATCTCCAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: GSGSMAPCPSRALRGQSGFLPYP*FQSPDS Trigger: GGAGTCTGGAGATTGGAATCAGGGATAAGGTAGAAA...ACCACTCTGTCCCCTGAGGGCCCTGCTGGGGCACGGAGCCATACTCCCACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR GCA 90 bp | CCTGTCAGCAGGAAGGTCCAGTTCTACTCCCTTTGTCTCATAGGGAGAGCAAAGGGCAGGGAGAGGGCCTaGAGCAGGGACAGACCACAC | + |
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Preference number: 2 (lower is better) Translates to: PVSRKVQFYSLCLIGRAKGRERA*SRDRPH Trigger: GTGTGGTCTGTCCCTGCTGCAGGCCCTCTCCCTGCC...CTTTGCTCTCCCTATGAGACAAAGGGAGTAGAACTGGACCTTCCTGCTGACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR TCA 90 bp | GGCCGGCAGTCAGCAGGAGGAAGGTTGCAAGGGCTGGGGCCACTGAGGCCTTCTAAAGTAAGAAACGACTaGTCTTTAGAAAGCACGCGT | + |
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Preference number: 2 (lower is better) Translates to: GRQSAGGRLQGLGPLRPSKVRND*SLESTR Trigger: ACGCGTGCTTTCTAAAGATCAGTCGTTTCTTACTTT...AGAAGGCCTCAGTGGCCCCAGCCCTTGCAACCTTCCTCCTGCTGACTGCCGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR CCA 90 bp | CCTGTCAGCAGGAAGGTCCAGTTCTACTCCCTTTGTCTCATAGGGAGAGCAAAGAGCTTAGGCTCATGTTaGGCTCCAGGACACAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: PVSRKVQFYSLCLIGRAKSLGSC*APGHRN Trigger: GTTCCTGTGTCCTGGAGCCCAACATGAGCCTAAGCT...CTTTGCTCTCCCTATGAGACAAAGGGAGTAGAACTGGACCTTCCTGCTGACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR CCA 90 bp | CCTGTCAGCAGGAAGGTCCAGTTCTACTCCCTTTGTCTCATAGGGAGAGCAAAGCAGGCAAAGGAGCCTTaGCATGCTCATGTCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PVSRKVQFYSLCLIGRAKQAKEP*HAHVSA Trigger: AGCTGAGACATGAGCATGCCAAGGCTCCTTTGCCTG...CTTTGCTCTCCCTATGAGACAAAGGGAGTAGAACTGGACCTTCCTGCTGACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAAGCCCAGCATGGCACCTTGAGTCAAATGCTCACCGAGTCCTGGTGTGGAATTCTTGGGCCTCTTaGGAAGTTCCAAAAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: TESPAWHLESNAHRVLVWNSWAS*EVPKTQ Trigger: CTGGGTTTTTGGAACTTCTCAAGAGGCCCAAGAATT...CCACACCAGGACTCGGTGAGCATTTGACTCAAGGTGCCATGCTGGGCTTTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCAGCAGGAAGGTCCAGTTCTACTCCCTTTGTCTCATAGGGAGAGCAAAGTCCCAAGAGGCAGGCTaGTGCAGCTTCTTGAAAATT | + |
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Preference number: 2 (lower is better) Translates to: PVSRKVQFYSLCLIGRAKSQEAG*CSFLKI Trigger: AATTTTCAAGAAGCTGCATCAGCCTGCCTCTTGGGA...CTTTGCTCTCCCTATGAGACAAAGGGAGTAGAACTGGACCTTCCTGCTGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR CCA 90 bp | CCTGTCAGCAGGAAGGTCCAGTTCTACTCCCTTTGTCTCATAGGGAGAGCAAAGACAGAAAGCCCAGCATaGCACCTTGAGTCAAATGCT | + |
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Preference number: 2 (lower is better) Translates to: PVSRKVQFYSLCLIGRAKTESPA*HLESNA Trigger: AGCATTTGACTCAAGGTGCCATGCTGGGCTTTCTGT...CTTTGCTCTCCCTATGAGACAAAGGGAGTAGAACTGGACCTTCCTGCTGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTATTTATTTATTTTTCGTCCGCCTTGAGGAAGAGGGGGATTGGTTGGACGAGTCAAAGGCCACATaGCCACCATCCCTCAGATCC | + |
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Preference number: 2 (lower is better) Translates to: LVIYLFFVRLEEEGDWLDESKAT*PPSLRS Trigger: GGATCTGAGGGATGGTGGGCATGTGGCCTTTGACTC...GTCCAACCAATCCCCCTCTTCCTCAAGGCGGACGAAAAATAAATAAATAACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAAGCCCAGCATGGCACCTTGAGTCAAATGCTCACCGAGTCCTGGTGTGGGCTTTCTCTTCAGAATaGGTGATATTTACAACCACC | + |
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Preference number: 2 (lower is better) Translates to: TESPAWHLESNAHRVLVWAFSSE*VIFTTT Trigger: GGTGGTTGTAAATATCACCCATTCTGAAGAGAAAGC...CCACACCAGGACTCGGTGAGCATTTGACTCAAGGTGCCATGCTGGGCTTTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR CCA 90 bp | CACCCTCATAACCACTTGGAAAATGATGCTCTTTCTTTCTTTCTTTCTTTCTTTGAAGAAGCCTCCCTGTaGCCCAGTGCCCAGCGAGGG | + |
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Preference number: 2 (lower is better) Translates to: HPHNHLENDALSFFLSFFEEASL*PSAQRG Trigger: CCCTCGCTGGGCACTGGGCCACAGGGAGGCTTCTTC...AAAGAAAGAAAGAAAGAAAGAAAGAGCATCATTTTCCAAGTGGTTATGAGGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CAA 90 bp | TCTTTCCTCTGTTCACTCTCAGGTTTCCCTTTCAAATCTTTAAGCTaGTACATCTGTGTCAGAACACCAGGTTGGAAGTGGGAGTATGGC | + |
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Preference number: 2 (lower is better) Translates to: SFLCSLSGFPFKSLS*YICVRTPGWKWEYG Trigger: GCCATACTCCCACTTCCAACCTGGTGTTCTGACACAGATGTACAAGCTTAAAGATTTGAAAGGGAAACCTGAGAGTGAACAGAGGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CAA 90 bp | AACCTGGACACACTCATCTGGTTATTTATTTATTTTTCGTCCGCCTaGAGGAAGAGGGGGATTGGTTGGACAAACTGTAGGACACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: NLDTLIWLFIYFSSA*RKRGIGWTNCRTQN Trigger: GTTCTGTGTCCTACAGTTTGTCCAACCAATCCCCCTCTTCCTCAAGGCGGACGAAAAATAAATAAATAACCAGATGAGTGTGTCCAGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR-3UTR CAA 90 bp | CCAGAGGTCCCAGTGCCCGGAAGAAGCCTCCCTGTGGCCCAGTGCCCAGCGAGGACACAAACAGCCACCTaGGGGGAGGCCTGTGCCGAG | + |
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Preference number: 3 (lower is better) Translates to: PEVPVPGRSLPVAQCPARTQTAT*GEACAE Trigger: CTCGGCACAGGCCTCCCCCAAGGTGGCTGTTTGTGT...CCTCGCTGGGCACTGGGCCACAGGGAGGCTTCTTCCGGGCACTGGGACCTCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR GCA 72 bp | GGCAGGAAACAGTCGATGGGAGGCCAGAGGTCCCAGTaGCCGGAAGAAGCCTCCCTGTGGCCCAGTGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GRKQSMGGQRSQ*PEEASLWPSAQ Trigger: CTGGGCACTGGGCCACAGGGAGGCTTCTTCCGGGCACTGGGACCTCTGGCCTCCCATCGACTGTTTCCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR GCA 72 bp | GTCCCAGTGCCCGGAAGAAGCCTCCCTGTGGCCCAGTaGCCAGCGAGGGAGGATGCGTTTGACATCTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VPVPGRSLPVAQ*PAREDAFDIWH Trigger: ATGCCAGATGTCAAACGCATCCTCCCTCGCTGGGCACTGGGCCACAGGGAGGCTTCTTCCGGGCACTGGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | GGCTCCGTGCCCCAGCAGGGCCCTCAGGGGACAGAGTaGTTCCTCAGGCCAGTGTGGAAGGACAGAGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSVPQQGPQGTE*FLRPVWKDRVK Trigger: TTTGACTCTGTCCTTCCACACTGGCCTGAGGAACCACTCTGTCCCCTGAGGGCCCTGCTGGGGCACGGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | CCGGCTGGAGCTAGGATATGGGTTGTCTTCTTCCGGTaGTGGGGCGGGGGCAGGAAAGGACAGATGGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: PAGARIWVVFFR*WGGGRKGQMDL Trigger: CAGGTCCATCTGTCCTTTCCTGCCCCCGCCCCACCACCGGAAGAAGACAACCCATATCCTAGCTCCAGCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR TCA 72 bp | CAGAGCCTCCGAATTTGCCCTGGTTTCCTGATCTCCTaGGGTGGAGAGCAGCAGGCCCCAGGACAGCTCGAG | + |
|
Preference number: 3 (lower is better) Translates to: QSLRICPGFLIS*GGEQQAPGQLE Trigger: CTCGAGCTGTCCTGGGGCCTGCTGCTCTCCACCTCAGGAGATCAGGAAACCAGGGCAAATTCGGAGGCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | CCAGGACACAGGAACATCTGGGCAGGAAACAGTCGATaGGAGGCCAGAGGTCCCAGTGCCCGGAAGAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PGHRNIWAGNSR*EARGPSARKKP Trigger: AGGCTTCTTCCGGGCACTGGGACCTCTGGCCTCCCATCGACTGTTTCCTGCCCAGATGTTCCTGTGTCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | GGCCCTCAGGGGACAGAGTGGTTCCTCAGGCCAGTGTaGAAGGACAGAGTCAAAGGCCACATGCCCACCATC | + |
|
Preference number: 3 (lower is better) Translates to: GPQGTEWFLRPV*KDRVKGHMPTI Trigger: GATGGTGGGCATGTGGCCTTTGACTCTGTCCTTCCACACTGGCCTGAGGAACCACTCTGTCCCCTGAGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | CATCTGTGTCAGAACACCAGGTTGGAAGTGGGAGTATaGCTCCGTGCCCCAGCAGGGCCCTCAGGGGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: HLCQNTRLEVGV*LRAPAGPSGDR Trigger: TCTGTCCCCTGAGGGCCCTGCTGGGGCACGGAGCCATACTCCCACTTCCAACCTGGTGTTCTGACACAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | GCTGGAGCTAGGATATGGGTTGTCTTCTTCCGGTGGTaGGGCGGGGGCAGGAAAGGACAGATGGACCTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: AGARIWVVFFRW*GGGRKGQMDLR Trigger: ACGCAGGTCCATCTGTCCTTTCCTGCCCCCGCCCCACCACCGGAAGAAGACAACCCATATCCTAGCTCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | TCACCATCTCATAGGCAACCGGCTGGAGCTAGGATATaGGTTGTCTTCTTCCGGTGGTGGGGCGGGGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SPSHRQPAGARI*VVFFRWWGGGR Trigger: CCTGCCCCCGCCCCACCACCGGAAGAAGACAACCCATATCCTAGCTCCAGCCGGTTGCCTATGAGATGGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | TTACCACAGGCTGCTGCTCTATTGCCAGAAGAGACATaGGACAGCTCCTGGGTCTCCCTGGGGGCTGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LPQAAALLPEET*DSSWVSLGAGA Trigger: AGCCCCAGCCCCCAGGGAGACCCAGGAGCTGTCCCATGTCTCTTCTGGCAATAGAGCAGCAGCCTGTGGTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR-3UTR CAA 90 bp | AGAACACCAGGTTGGAAGTGGGAGTATGGCTCCGTGCCCCAGCAGGGCCCTCAGGGCATGACTGGTTTCTaGGTTCCCAAGAGGCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RTPGWKWEYGSVPQQGPQGMTGF*VPKRQA Trigger: AGCCTGCCTCTTGGGAACCAAGAAACCAGTCATGCC...CTGAGGGCCCTGCTGGGGCACGGAGCCATACTCCCACTTCCAACCTGGTGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR-3UTR CAA 90 bp | TACAACCACCAGCTCCACCAGGGGGCCAGACAGAGGCTGAGGGAGACACAGAGGCGAGGGAGGATGCGTTaGACATCTGGCATGACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: YNHQLHQGARQRLRETQRRGRMR*TSGMTG Trigger: ACCAGTCATGCCAGATGTCAAACGCATCCTCCCTCG...CCTCTGTGTCTCCCTCAGCCTCTGTCTGGCCCCCTGGTGGAGCTGGTGGTTGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR TCA 72 bp | AAAGCCAGCAGAGCCTCCGAATTTGCCCTGGTTTCCTaGTCTCCTGAGGTGGAGAGCAGCAGGCCCCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: KASRASEFALVS*SPEVESSRPQD Trigger: GTCCTGGGGCCTGCTGCTCTCCACCTCAGGAGATCAGGAAACCAGGGCAAATTCGGAGGCTCTGCTGGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | GCCCAGTGCCCAGCGAGGGAGGATGCGTTTGACATCTaGCATGACTGGTTTCTTGGTTCCCAAGAGGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AQCPAREDAFDI*HDWFLGSQEAG Trigger: GCCTGCCTCTTGGGAACCAAGAAACCAGTCATGCCAGATGTCAAACGCATCCTCCCTCGCTGGGCACTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | AGGTTGCAAGGGCTGGGGCCACTGAGGCCTTCTCCCTaGGTTCTACCCCCGTCTCTCTTCTTCCTATCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RLQGLGPLRPSP*VLPPSLFFLSP Trigger: AGGAGATAGGAAGAAGAGAGACGGGGGTAGAACCCAGGGAGAAGGCCTCAGTGGCCCCAGCCCTTGCAACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | AGCTTGTACATCTGTGTCAGAACACCAGGTTGGAAGTaGGAGTATGGCTCCGTGCCCCAGCAGGGCCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLYICVRTPGWK*EYGSVPQQGPQ Trigger: CTGAGGGCCCTGCTGGGGCACGGAGCCATACTCCCACTTCCAACCTGGTGTTCTGACACAGATGTACAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | CTTCTTGGTCCCTGGAGTGGGCCTGTGCACTCTGCCTaGAACCGGACAAGAGGTAGGAGTCATCGGAACACA | + |
|
Preference number: 3 (lower is better) Translates to: LLGPWSGPVHSA*NRTRGRSHRNT Trigger: TGTGTTCCGATGACTCCTACCTCTTGTCCGGTTCCAGGCAGAGTGCACAGGCCCACTCCAGGGACCAAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR-3UTR CAA 90 bp | GGCCGGCAGTCAGCAGGAGGAAGGTTGCAAGGGCTGGGGCCACTGAGGCCTTCTAAATTCTTGGGCCTCTaGAGAAGTTCCAAAAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: GRQSAGGRLQGLGPLRPSKFLGL*RSSKNP Trigger: TGGGTTTTTGGAACTTCTCAAGAGGCCCAAGAATTT...AGAAGGCCTCAGTGGCCCCAGCCCTTGCAACCTTCCTCCTGCTGACTGCCGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCTCATAGGGAGAGCAAAGCTGGAGACCAAGTTCTCCAGAGTGAGGCCGGCCTTCCTATCTCCTTCTaGGTCCCTGGAGTGGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSHRESKAGDQVLQSEAGLPISF*VPGVGL Trigger: CAGGCCCACTCCAGGGACCAAGAAGGAGATAGGAAG...GCCGGCCTCACTCTGGAGAACTTGGTCTCCAGCTTTGCTCTCCCTATGAGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR TCA 72 bp | TTATCCCTGATTCCAATCTCCAGACTCCCCTCACTCTaGGCTAGCCCATGGCGTCTTCTGGAGGCCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSLIPISRLPSL*ASPWRLLEARE Trigger: CTCCCTGGCCTCCAGAAGACGCCATGGGCTAGCTCAGAGTGAGGGGAGTCTGGAGATTGGAATCAGGGATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR TCA 72 bp | TGGGACAGAAGAAGGGTAGGAAGGTGGGCTCAGACCTaGGCCTGTCAGCAGGAAGGTCCAGTTCTACTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: WDRRRVGRWAQT*ACQQEGPVLLP Trigger: AGGGAGTAGAACTGGACCTTCCTGCTGACAGGCTCAGGTCTGAGCCCACCTTCCTACCCTTCTTCTGTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | CCAGGAGGGCATGGTTCTGAGCAGGCAAAGGAGCCTTaGCATGCTCATGTCTCAGCTCACCATCTCATAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PGGHGSEQAKEP*HAHVSAHHLIG Trigger: GCCTATGAGATGGTGAGCTGAGACATGAGCATGCCAAGGCTCCTTTGCCTGCTCAGAACCATGCCCTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR TCA 72 bp | GATTCAGGCAAAGACAGAAAGCCCAGCATGGCACCTTaGGTCAAATGCTCACCGAGTCCTGGTGTGGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DSGKDRKPSMAP*VKCSPSPGVGR Trigger: TCTGCCCACACCAGGACTCGGTGAGCATTTGACTCAAGGTGCCATGCTGGGCTTTCTGTCTTTGCCTGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCTCATAGGGAGAGCAAAGCTGGAGACCAAGTTCTCCAGAGTGAGGCCGGCTATTTTTCGTCCGCCTaGAGGAAGAGGGGGATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSHRESKAGDQVLQSEAGYFSSA*RKRGIG Trigger: ACCAATCCCCCTCTTCCTCAAGGCGGACGAAAAATA...GCCGGCCTCACTCTGGAGAACTTGGTCTCCAGCTTTGCTCTCCCTATGAGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCAAAGCTGGAGACCAAGTTCTCCAGAGTGAGGCCGGCAGTCAGCAGGAGGCACCCTCATAACCACTaGGAAAATGATGCTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RAKLETKFSRVRPAVSRRHPHNH*ENDALS Trigger: AGAAAGAGCATCATTTTCCAAGTGGTTATGAGGGTG...CCTCCTGCTGACTGCCGGCCTCACTCTGGAGAACTTGGTCTCCAGCTTTGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR TCA 72 bp | CACCAGTTAGCCATAGAGCTTTCTCTTCAGAATGGGTaGTATTTACAACCACCAGCTCCACCAGGGGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HQLAIELSLQNG*YLQPPAPPGGQ Trigger: CTGGCCCCCTGGTGGAGCTGGTGGTTGTAAATATCACCCATTCTGAAGAGAAAGCTCTATGGCTAACTGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR TCA 72 bp | CATTCTGAGCTCAGCGGAAACTTCCAGAAGCAGGTATaGAAGCCAGCAGAGCCTCCGAATTTGCCCTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: HSELSGNFQKQV*KPAEPPNLPWF Trigger: AAACCAGGGCAAATTCGGAGGCTCTGCTGGCTTTCATACCTGCTTCTGGAAGTTTCCGCTGAGCTCAGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | CATTCTTGGATTCAGGCAAAGACAGAAAGCCCAGCATaGCACCTTGAGTCAAATGCTCACCGAGTCCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: HSWIQAKTESPA*HLESNAHRVLV Trigger: CACCAGGACTCGGTGAGCATTTGACTCAAGGTGCCATGCTGGGCTTTCTGTCTTTGCCTGAATCCAAGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | GAAGCACCAGTTAGCCATAGAGCTTTCTCTTCAGAATaGGTGATATTTACAACCACCAGCTCCACCAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: EAPVSHRAFSSE*VIFTTTSSTRG Trigger: CCCCCTGGTGGAGCTGGTGGTTGTAAATATCACCCATTCTGAAGAGAAAGCTCTATGGCTAACTGGTGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | CACATGCCCACCATCCCTCAGATCCGTGAAACCCTCTaGACCTCCAAGATTAGTCAGTATGTCCTGTACATT | + |
|
Preference number: 3 (lower is better) Translates to: HMPTIPQIRETL*TSKISQYVLYI Trigger: AATGTACAGGACATACTGACTAATCTTGGAGGTCCAGAGGGTTTCACGGATCTGAGGGATGGTGGGCATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR TCA 72 bp | GGGGAGGTGGTGTTGCTCTTTTTCAGGATAAAGAGGTaGGTACAGCTTGGTCTTCTGACGATGTTCTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GEVVLLFFRIKR*VQLGLLTMFFS Trigger: ACTGAAGAACATCGTCAGAAGACCAAGCTGTACTCACCTCTTTATCCTGAAAAAGAGCAACACCACCTCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | TATTTTTCGTCCGCCTTGAGGAAGAGGGGGATTGGTTaGACAAACTGTAGGACACAGAACACATTCTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: YFSSALRKRGIG*TNCRTQNTFLD Trigger: ATCCAAGAATGTGTTCTGTGTCCTACAGTTTGTCCAACCAATCCCCCTCTTCCTCAAGGCGGACGAAAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | ACGCGTGTTATAGAAAAGAGGGTGAGTTTCACTTTCTaGAGAGTTCTTTCGAACCTGGACACACTCATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TRVIEKRVSFTF*RVLSNLDTLIW Trigger: CCAGATGAGTGTGTCCAGGTTCGAAAGAACTCTCCAGAAAGTGAAACTCACCCTCTTTTCTATAACACGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CCA 72 bp | GACGATGTTCTTCAGTATGCCACCCTCATAACCACTTaGAAAATGATGCTCTTTCTTTCTTTCTTTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DDVLQYATLITT*KMMLFLSFFLS Trigger: AGAAAGAAAGAAAGAAAGAAAGAGCATCATTTTCCAAGTGGTTATGAGGGTGGCATACTGAAGAACATCGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| CDS-3UTR TCA 90 bp | TCCCAGTGCCCGGAAGAAGCCTCCCTGTGGCCCAGTGCCCAGCGAGGGAGGATGACAGTCCCGAATGGGTaGGGTCGCCGCGAGCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQCPEEASLWPSAQRGRMTVPNG*GRRERG Trigger: GCCGCGCTCGCGGCGACCTCACCCATTCGGGACTGT...CATCCTCCCTCGCTGGGCACTGGGCCACAGGGAGGCTTCTTCCGGGCACTGGGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| CDS-3UTR GCA 90 bp | GGAAGTGGGAGTATGGCTCCGTGCCCCAGCAGGGCCCTCAGGGGACAGAGTGGTGTGGTCAGCAGCATCTaGAGCCCGCGGTCGCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: GSGSMAPCPSRALRGQSGVVSSI*SPRSHR Trigger: GCGATGCGACCGCGGGCTGCAGATGCTGCTGACCAC...ACCACTCTGTCCCCTGAGGGCCCTGCTGGGGCACGGAGCCATACTCCCACTTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTGCCCGGAAGAAGCCTCCCTGTGGCCCAGTGCCCAGCGAGGGAGGATGACCTTGAACTGGACCTaGACCGCCGTCGCCGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: SQCPEEASLWPSAQRGRMTLNWT*TAVAGT Trigger: GGTACCGGCGACGGCGGTCCAGGTCCAGTTCAAGGT...CATCCTCCCTCGCTGGGCACTGGGCCACAGGGAGGCTTCTTCCGGGCACTGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| CDS-3UTR GCA 90 bp | GTGAGGCCGGCAGTCAGCAGGAGGAAGGTTGCAAGGGCTGGGGCCACTGAGGCCTCAGGTTGGTGCCGTTaGAGATGTGCGCGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRPAVSRRKVARAGATEASGWCR*RCARWS Trigger: ACTCCAGCGCGCACATCTGCAACGGCACCAACCTGA...GGCCTCAGTGGCCCCAGCCCTTGCAACCTTCCTCCTGCTGACTGCCGGCCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| CDS-3UTR CCA 90 bp | TACAACCACCAGCTCCACCAGGGGGCCAGACAGAGGCTGAGGGAGACACAGAGGGGGGCCCGTCGTCCATaGTCAGGTTGGTGCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YNHQLHQGARQRLRETQRGARRP*SGWCRC Trigger: GCAACGGCACCAACCTGACCATGGACGACGGGCCCC...CCTCTGTGTCTCCCTCAGCCTCTGTCTGGCCCCCTGGTGGAGCTGGTGGTTGTA 64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| CDS-3UTR GCA 90 bp | TACAACCACCAGCTCCACCAGGGGGCCAGACAGAGGCTGAGGGAGACACAGAGGCCATGGTCAGGTTGGTaGCGTTGCAGATGTGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: YNHQLHQGARQRLRETQRPWSGW*RCRCAR Trigger: GCGCGCACATCTGCAACGGCACCAACCTGACCATGG...CCTCTGTGTCTCCCTCAGCCTCTGTCTGGCCCCCTGGTGGAGCTGGTGGTTGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAAGCTGGAGACCAAGTTCTCCAGAGTGAGGCCGGCAGTCAGCAGGAGGCCGTGGACCTTGAACTaGACCTGGACCGCCGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RAKLETKFSRVRPAVSRRPWTLN*TWTAVA Trigger: GGCGACGGCGGTCCAGGTCCAGTTCAAGGTCCACGG...CCTCCTGCTGACTGCCGGCCTCACTCTGGAGAACTTGGTCTCCAGCTTTGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| CDS-3UTR CCA 90 bp | CTCCGTGCCCCAGCAGGGCCCTCAGGGGACAGAGTGGTTCCTCAGGCCAGTGTGTGGATAGCGTGTACATaGACAGCTCACCCATGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRAPAGPSGDRVVPQASVWIACT*TAHPWE Trigger: TTCCCATGGGTGAGCTGTCCATGTACACGCTATCCA...CACACTGGCCTGAGGAACCACTCTGTCCCCTGAGGGCCCTGCTGGGGCACGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| CDS-3UTR CCA 90 bp | AGAACACCAGGTTGGAAGTGGGAGTATGGCTCCGTGCCCCAGCAGGGCCCTCAGTGTAGCTCGGCATCCTaGCGTAAGGAGAGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTPGWKWEYGSVPQQGPQCSSAS*RKERRK Trigger: CTTCCTCCTCTCCTTACGCCAGGATGCCGAGCTACA...CTGAGGGCCCTGCTGGGGCACGGAGCCATACTCCCACTTCCAACCTGGTGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CAA 72 bp | CATCTCATAGGCAACCGGCTGGAGCTAGGATATGGGTaGTCTTCTTCCGGTGGTGGGGCGGGGGCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLIGNRLELGYG*SSSGGGAGAGK Trigger: CTTTCCTGCCCCCGCCCCACCACCGGAAGAAGACAACCCATATCCTAGCTCCAGCCGGTTGCCTATGAGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| CDS-3UTR GCA 90 bp | AGAACACCAGGTTGGAAGTGGGAGTATGGCTCCGTGCCCCAGCAGGGCCCTCAGAAGAAGTCATGCATCTaGAGGAAGCCAGCGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTPGWKWEYGSVPQQGPQKKSCI*RKPASW Trigger: CCAGGACGCTGGCTTCCTGCAGATGCATGACTTCTT...CTGAGGGCCCTGCTGGGGCACGGAGCCATACTCCCACTTCCAACCTGGTGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| CDS-3UTR GCA 90 bp | TTGTCTCATAGGGAGAGCAAAGCTGGAGACCAAGTTCTCCAGAGTGAGGCCGGCGTGCCGTTGCAGATGTaGGCGCTGGAGTACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSHRESKAGDQVLQSEAGVPLQM*ALEYSQ Trigger: CTGGCTGTACTCCAGCGCGCACATCTGCAACGGCAC...GCCGGCCTCACTCTGGAGAACTTGGTCTCCAGCTTTGCTCTCCCTATGAGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CAA 72 bp | TCCCTGTGGCCCAGTGCCCAGCGAGGGAGGATGCGTTaGACATCTGGCATGACTGGTTTCTTGGTTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLWPSAQRGRMR*TSGMTGFLVPK Trigger: CTTGGGAACCAAGAAACCAGTCATGCCAGATGTCAAACGCATCCTCCCTCGCTGGGCACTGGGCCACAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| 3UTR CAA 72 bp | GGAGAGGGCCTGCAGCAGGGACAGACCACACATGTCTaGACATTGGCGCTCATTTGCGGCACATGCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GEGLQQGQTTHV*TLALICGTCLD Trigger: GTCCAAGCATGTGCCGCAAATGAGCGCCAATGTCAAGACATGTGTGGTCTGTCCCTGCTGCAGGCCCTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
||
| CDS-3UTR TCA 90 bp | GCTTTCTCTTCAGAATGGGTGATATTTACAACCACCAGCTCCACCAGGGGGCCATGGGAATGGCTCCGGTaGTCTTCAGGCCCACGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AFSSEWVIFTTTSSTRGPWEWLR*SSGPRE Trigger: CTCCCGTGGGCCTGAAGATCACCGGAGCCATTCCCA...TGGCCCCCTGGTGGAGCTGGTGGTTGTAAATATCACCCATTCTGAAGAGAAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS-3UTR TCA 90 bp | TTGTCTCATAGGGAGAGCAAAGCTGGAGACCAAGTTCTCCAGAGTGAGGCCGGCGGAGCAGAATGGTGCTaGGGATGGGAAAGACACTGG | + |
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Preference number: 4 (lower is better) Translates to: LSHRESKAGDQVLQSEAGGAEWC*GWERHW Trigger: CCAGTGTCTTTCCCATCCTCAGCACCATTCTGCTCC...GCCGGCCTCACTCTGGAGAACTTGGTCTCCAGCTTTGCTCTCCCTATGAGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CAA 72 bp | GGATTCAGGCAAAGACAGAAAGCCCAGCATGGCACCTaGAGTCAAATGCTCACCGAGTCCTGGTGTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GFRQRQKAQHGT*SQMLTESWCGQ Trigger: CTGCCCACACCAGGACTCGGTGAGCATTTGACTCAAGGTGCCATGCTGGGCTTTCTGTCTTTGCCTGAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CAA 72 bp | GGCCTGCAGCAGGGACAGACCACACATGTCTTGACATaGGCGCTCATTTGCGGCACATGCTTGGACACATAC | + |
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Preference number: 4 (lower is better) Translates to: GLQQGQTTHVLT*ALICGTCLDTY Trigger: GTATGTGTCCAAGCATGTGCCGCAAATGAGCGCCAATGTCAAGACATGTGTGGTCTGTCCCTGCTGCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS-3UTR CCA 90 bp | CTGGTTATTTATTTATTTTTCGTCCGCCTTGAGGAAGAGGGGGATTGGTTGGACCGCCACAGTCCCGAATaGGTGAGGTCGCCGCGAGCG | + |
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Preference number: 4 (lower is better) Translates to: LVIYLFFVRLEEEGDWLDRHSPE*VRSPRA Trigger: CGCTCGCGGCGACCTCACCCATTCGGGACTGTGGCG...GTCCAACCAATCCCCCTCTTCCTCAAGGCGGACGAAAAATAAATAAATAACCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CAA 72 bp | AGCTTGCATGGAAGTTTACCACAGGCTGCTGCTCTATaGCCAGAAGAGACATGGGACAGCTCCTGGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SLHGSLPQAAAL*PEETWDSSWVS Trigger: GGAGACCCAGGAGCTGTCCCATGTCTCTTCTGGCAATAGAGCAGCAGCCTGTGGTAAACTTCCATGCAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CAA 72 bp | ATCTTTAAGCTTGTACATCTGTGTCAGAACACCAGGTaGGAAGTGGGAGTATGGCTCCGTGCCCCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: IFKLVHLCQNTR*EVGVWLRAPAG Trigger: CCCTGCTGGGGCACGGAGCCATACTCCCACTTCCAACCTGGTGTTCTGACACAGATGTACAAGCTTAAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS-3UTR GCA 90 bp | TTGTCTCATAGGGAGAGCAAAGCTGGAGACCAAGTTCTCCAGAGTGAGGCCGGCGGACAATATTGTTCTTaGGGCTGTAGATCCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSHRESKAGDQVLQSEAGGQYCS*GCRSSQ Trigger: CTGGGAGGATCTACAGCCGCAAGAACAATATTGTCC...GCCGGCCTCACTCTGGAGAACTTGGTCTCCAGCTTTGCTCTCCCTATGAGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CAA 72 bp | CTCCACGAGCAGGTGACTGAGGTAAGAATTGGCGTGTaGTCACTTCTAAGTAAGACAGTTACCGGGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: LHEQVTEVRIGV*SLLSKTVTGVT Trigger: TGTGACCCCGGTAACTGTCTTACTTAGAAGTGACAACACGCCAATTCTTACCTCAGTCACCTGCTCGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS-3UTR CCA 90 bp | CTGGTTATTTATTTATTTTTCGTCCGCCTTGAGGAAGAGGGGGATTGGTTGGACGGATGGGAAAGACACTaGAGGCTCGCACAATGCGGA | + |
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Preference number: 4 (lower is better) Translates to: LVIYLFFVRLEEEGDWLDGWERH*RLAQCG Trigger: TCCGCATTGTGCGAGCCTCCAGTGTCTTTCCCATCC...GTCCAACCAATCCCCCTCTTCCTCAAGGCGGACGAAAAATAAATAAATAACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS-3UTR TCA 90 bp | CTGGTTATTTATTTATTTTTCGTCCGCCTTGAGGAAGAGGGGGATTGGTTGGACGCCGGTTCAGCATGCTaGCATGGAAACCTTCCTTTA | + |
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Preference number: 4 (lower is better) Translates to: LVIYLFFVRLEEEGDWLDAGSAC*HGNLPL Trigger: TAAAGGAAGGTTTCCATGTCAGCATGCTGAACCGGC...GTCCAACCAATCCCCCTCTTCCTCAAGGCGGACGAAAAATAAATAAATAACCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS-3UTR CCA 90 bp | CCTACCTCGGGAGAAAGTCAGCCTTCTGTTTCTACCTTATCCCTGATTCCAATCGTAATCATTGTCCTCTaGGAAGTGGTTGATCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: PTSGESQPSVSTLSLIPIVIIVL*EVVDPE Trigger: TTCCGGATCAACCACTTCCCAGAGGACAATGATTAC...GATTGGAATCAGGGATAAGGTAGAAACAGAAGGCTGACTTTCTCCCGAGGTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS-3UTR GCA 90 bp | CACCCTCATAACCACTTGGAAAATGATGCTCTTTCTTTCTTTCTTTCTTTCTTTTGGAGGCTCGCACAATaGGGAGGAGGTACTCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: HPHNHLENDALSFFLSFFWRLAQ*GGGTRS Trigger: GCTCCGAGTACCTCCTCCGCATTGTGCGAGCCTCCA...AAAGAAAGAAAGAAAGAAAGAAAGAGCATCATTTTCCAAGTGGTTATGAGGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CAA 72 bp | TGTTCACTCTCAGGTTTCCCTTTCAAATCTTTAAGCTaGTACATCTGTGTCAGAACACCAGGTTGGAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: CSLSGFPFKSLS*YICVRTPGWKW Trigger: CCACTTCCAACCTGGTGTTCTGACACAGATGTACAAGCTTAAAGATTTGAAAGGGAAACCTGAGAGTGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| 3UTR CAA 72 bp | ACACTCATCTGGTTATTTATTTATTTTTCGTCCGCCTaGAGGAAGAGGGGGATTGGTTGGACAAACTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: TLIWLFIYFSSA*RKRGIGWTNCR Trigger: CCTACAGTTTGTCCAACCAATCCCCCTCTTCCTCAAGGCGGACGAAAAATAAATAAATAACCAGATGAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS-3UTR CCA 90 bp | CACCCTCATAACCACTTGGAAAATGATGCTCTTTCTTTCTTTCTTTCTTTCTTTTTCAGCATGCTGACATaGAAACCTTCCTTTAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: HPHNHLENDALSFFLSFFFSMLT*KPSFRS Trigger: GGACCTAAAGGAAGGTTTCCATGTCAGCATGCTGAA...AAAGAAAGAAAGAAAGAAAGAAAGAGCATCATTTTCCAAGTGGTTATGAGGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS TCA 90 bp | TATAGATGCCTTCGATGCAACACACCCGCCACAGTCCCGAATGGGTaGGGTCGCCGCGAGCGCGGCGGGGCGGGGGCCCGTCGTCCATGG | + |
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Preference number: 5 (lower is better) Translates to: YRCLRCNTPATVPNG*GRRERGGAGARRPW Trigger: CCATGGACGACGGGCCCCCGCCCCGCCGCGCTCGCGGCGACCTCACCCATTCGGGACTGTGGCGGGTGTGTTGCATCGAAGGCATCTATA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS CCA 90 bp | CGGGAGATGCATCCCTGGAGGGTGAGGCCTCCGTGGACCTTGAACTaGACCTGGACCGCCGTCGCCGGTACCTGTAGCTCGGCATCCTGG | + |
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Preference number: 5 (lower is better) Translates to: REMHPWRVRPPWTLN*TWTAVAGTCSSASW Trigger: CCAGGATGCCGAGCTACAGGTACCGGCGACGGCGGTCCAGGTCCAGTTCAAGGTCCACGGAGGCCTCACCCTCCAGGGATGCATCTCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS CCA 90 bp | TCTTCAGGCCCACGGGAGATGCATCCCTGGAGGGTGAGGCCTCCGTaGACCTTGAACTGGACCTGGACCGCCGTCGCCGGTACCTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: SSGPREMHPWRVRPP*TLNWTWTAVAGTCS Trigger: GCTACAGGTACCGGCGACGGCGGTCCAGGTCCAGTTCAAGGTCCACGGAGGCCTCACCCTCCAGGGATGCATCTCCCGTGGGCCTGAAGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS CCA 90 bp | ATGCATCCCTGGAGGGTGAGGCCTCCGTGGACCTTGAACTGGACCTaGACCGCCGTCGCCGGTACCTGTAGCTCGGCATCCTGGCGTAAG | + |
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Preference number: 5 (lower is better) Translates to: MHPWRVRPPWTLNWT*TAVAGTCSSASWRK Trigger: CTTACGCCAGGATGCCGAGCTACAGGTACCGGCGACGGCGGTCCAGGTCCAGTTCAAGGTCCACGGAGGCCTCACCCTCCAGGGATGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS-3UTR CAA 90 bp | TCCCAGTGCCCGGAAGAAGCCTCCCTGTGGCCCAGTGCCCAGCGAGGGAGGATGTCGTCCATGGTCAGGTaGGTGCCGTTGCAGATGTGC | + |
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Preference number: 5 (lower is better) Translates to: SQCPEEASLWPSAQRGRMSSMVR*VPLQMC Trigger: GCACATCTGCAACGGCACCAACCTGACCATGGACGA...CATCCTCCCTCGCTGGGCACTGGGCCACAGGGAGGCTTCTTCCGGGCACTGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS TCA 90 bp | TGGATAGCGTGTACATGGACAGCTCACCCATGGGAATGGCTCCGGTaGTCTTCAGGCCCACGGGAGATGCATCCCTGGAGGGTGAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: WIACTWTAHPWEWLR*SSGPREMHPWRVRP Trigger: AGGCCTCACCCTCCAGGGATGCATCTCCCGTGGGCCTGAAGATCACCGGAGCCATTCCCATGGGTGAGCTGTCCATGTACACGCTATCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS-3UTR CAA 90 bp | GGAAGTGGGAGTATGGCTCCGTGCCCCAGCAGGGCCCTCAGGGGACAGAGTGGTTTAAGGAACTCCCGCTaGGTCTTAAACCTCAACTCT | + |
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Preference number: 5 (lower is better) Translates to: GSGSMAPCPSRALRGQSGLRNSR*VLNLNS Trigger: AGAGTTGAGGTTTAAGACCAAGCGGGAGTTCCTTAA...ACCACTCTGTCCCCTGAGGGCCCTGCTGGGGCACGGAGCCATACTCCCACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS-3UTR CAA 90 bp | CCTGTCAGCAGGAAGGTCCAGTTCTACTCCCTTTGTCTCATAGGGAGAGCAAAGAGGCCTCCGTGGACCTaGAACTGGACCTGGACCGCC | + |
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Preference number: 5 (lower is better) Translates to: PVSRKVQFYSLCLIGRAKRPPWT*NWTWTA Trigger: GGCGGTCCAGGTCCAGTTCAAGGTCCACGGAGGCCT...CTTTGCTCTCCCTATGAGACAAAGGGAGTAGAACTGGACCTTCCTGCTGACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS-3UTR CAA 90 bp | AGGCCAGGGAGGATCGCACTCAGCTCCACTTCACTGTCTATAATCTTAAGGGTCGTCAGGTTGGTGCCGTaGCAGATGTGCGCGCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: RPGRIALSSTSLSIILRVVRLVP*QMCALE Trigger: CTCCAGCGCGCACATCTGCAACGGCACCAACCTGAC...GACCCTTAAGATTATAGACAGTGAAGTGGAGCTGAGTGCGATCCTCCCTGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS-3UTR CAA 90 bp | CCTGTCAGCAGGAAGGTCCAGTTCTACTCCCTTTGTCTCATAGGGAGAGCAAAGTTGTCTTCGTCACGTTaGTCACTGGGGTCGCCCGTG | + |
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Preference number: 5 (lower is better) Translates to: PVSRKVQFYSLCLIGRAKLSSSR*SLGSPV Trigger: CACGGGCGACCCCAGTGACAAACGTGACGAAGACAA...CTTTGCTCTCCCTATGAGACAAAGGGAGTAGAACTGGACCTTCCTGCTGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS-3UTR CAA 90 bp | CTCCACGAGCAGGTGACTGAGGTAAGAATTGGCGTGTTGTCACTTCTAAGTAAGTCCTCTGGGAAGTGGTaGATCCGGAAGCAGTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: LHEQVTEVRIGVLSLLSKSSGKW*IRKQCP Trigger: AGGGCACTGCTTCCGGATCAACCACTTCCCAGAGGA...CTTACTTAGAAGTGACAACACGCCAATTCTTACCTCAGTCACCTGCTCGTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS GCA 90 bp | GTTGCTGGAAATGTAGACGATGATACCGATGATATTACTGAGGCCTaGCGCCACAAAGAGGATTCCCGCGCTGAGGACAATATTGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: VAGNVDDDTDDITEA*RHKEDSRAEDNIVL Trigger: AAGAACAATATTGTCCTCAGCGCGGGAATCCTCTTTGTGGCGGCAGGCCTCAGTAATATCATCGGTATCATCGTCTACATTTCCAGCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS GCA 72 bp | GGCGGGGCGGGGGCCCGTCGTCCATGGTCAGGTTGGTaGCGTTGCAGATGTGCGCGCTGGAGTACAGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: GGAGARRPWSGW*RCRCARWSTAS Trigger: ACTGGCTGTACTCCAGCGCGCACATCTGCAACGGCACCAACCTGACCATGGACGACGGGCCCCCGCCCCGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS CCA 72 bp | CCACGGGAGATGCATCCCTGGAGGGTGAGGCCTCCGTaGACCTTGAACTGGACCTGGACCGCCGTCGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: PREMHPWRVRPP*TLNWTWTAVAG Trigger: ACCGGCGACGGCGGTCCAGGTCCAGTTCAAGGTCCACGGAGGCCTCACCCTCCAGGGATGCATCTCCCGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS CCA 72 bp | TGGAGGGTGAGGCCTCCGTGGACCTTGAACTGGACCTaGACCGCCGTCGCCGGTACCTGTAGCTCGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: WRVRPPWTLNWT*TAVAGTCSSAS Trigger: GGATGCCGAGCTACAGGTACCGGCGACGGCGGTCCAGGTCCAGTTCAAGGTCCACGGAGGCCTCACCCTCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS CCA 72 bp | CATCCCTGGAGGGTGAGGCCTCCGTGGACCTTGAACTaGACCTGGACCGCCGTCGCCGGTACCTGTAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: HPWRVRPPWTLN*TWTAVAGTCSS Trigger: CGAGCTACAGGTACCGGCGACGGCGGTCCAGGTCCAGTTCAAGGTCCACGGAGGCCTCACCCTCCAGGGATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS TCA 72 bp | TGTACATGGACAGCTCACCCATGGGAATGGCTCCGGTaGTCTTCAGGCCCACGGGAGATGCATCCCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: CTWTAHPWEWLR*SSGPREMHPWR Trigger: CCTCCAGGGATGCATCTCCCGTGGGCCTGAAGATCACCGGAGCCATTCCCATGGGTGAGCTGTCCATGTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS GCA 72 bp | TGGAAACCTTCCTTTAGGTCCTGTTGGAAGAAGTCATaGATCTGCAGGAAGCCAGCGTCCTGGTCCGGACTG | + |
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Preference number: 6 (lower is better) Translates to: WKPSFRSCWKKS*ICRKPASWSGL Trigger: CAGTCCGGACCAGGACGCTGGCTTCCTGCAGATGCATGACTTCTTCCAACAGGACCTAAAGGAAGGTTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS CCA 72 bp | CACACGGGAGTCGTCCGCCGGTTCAGCATGCTGACATaGAAACCTTCCTTTAGGTCCTGTTGGAAGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: HTGVVRRFSMLT*KPSFRSCWKKS Trigger: TGACTTCTTCCAACAGGACCTAAAGGAAGGTTTCCATGTCAGCATGCTGAACCGGCGGACGACTCCCGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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| CDS GCA 72 bp | AATGTAGACGATGATACCGATGATATTACTGAGGCCTaGCGCCACAAAGAGGATTCCCGCGCTGAGGACAAT | + |
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Preference number: 6 (lower is better) Translates to: NVDDDTDDITEA*RHKEDSRAEDN Trigger: ATTGTCCTCAGCGCGGGAATCCTCTTTGTGGCGGCAGGCCTCAGTAATATCATCGGTATCATCGTCTACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021066.4 |
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