Pregenerated sensors for CACNG3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066189Ensembl transcript IDs: ENSMUST00000084615.10
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACCTGTGTGGTGGGTTTCACAGAGAGTTTGTGTGGGTGGACAATaGGAACACCTATGCATACAACTGATAGGGGATTTGGAAATCCCC | + |
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Preference number: 1 (lower is better) Translates to: PPVWWVSQRVCVGGQ*EHLCIQLIGDLEIP Trigger: GGGGATTTCCAAATCCCCTATCAGTTGTATGCATAGGTGTTCCCATTGTCCACCCACACAAACTCTCTGTGAAACCCACCACACAGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR GCA 90 bp | GTTTCGTTCTTTGTAAGAAGTGATACCATCACGAGGACCATGCCATaGAACCTTAGAGACATCTGTGTACACTTCCCCCAAGGCTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: VSFFVRSDTITRTMP*NLRDICVHFPQGCA Trigger: AGCACAGCCTTGGGGGAAGTGTACACAGATGTCTCTAAGGTTGCATGGCATGGTCCTCGTGATGGTATCACTTCTTACAAAGAACGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR GCA 90 bp | TGGGTTTCACAGAGAGTTTGTGTGGGTGGACAATGGGAACACCTATaGATACAACTGATAGGGGATTTGGAAATCCCCCGATGCTATGAC | + |
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Preference number: 1 (lower is better) Translates to: WVSQRVCVGGQWEHL*IQLIGDLEIPRCYD Trigger: GTCATAGCATCGGGGGATTTCCAAATCCCCTATCAGTTGTATGCATAGGTGTTCCCATTGTCCACCCACACAAACTCTCTGTGAAACCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR GCA 90 bp | TGCATACAACTGATAGGGGATTTGGAAATCCCCCGATGCTATGACTaGACCTTCGACTTTAGTCAAGTCCTTTCCCAAGGAGGGAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: CIQLIGDLEIPRCYD*TFDFSQVLSQGGKN Trigger: ATTCTTCCCTCCTTGGGAAAGGACTTGACTAAAGTCGAAGGTGCAGTCATAGCATCGGGGGATTTCCAAATCCCCTATCAGTTGTATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR GCA 90 bp | GAACACCTATGCATACAACTGATAGGGGATTTGGAAATCCCCCGATaGTATGACTGCACCTTCGACTTTAGTCAAGTCCTTTCCCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: EHLCIQLIGDLEIPR*YDCTFDFSQVLSQG Trigger: TCCTTGGGAAAGGACTTGACTAAAGTCGAAGGTGCAGTCATAGCATCGGGGGATTTCCAAATCCCCTATCAGTTGTATGCATAGGTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR-3UTR GCA 90 bp | GCCACCTGTGTGGTGGGTTTCACAGAGAGTTTGTGTGGGTGGACAATGGGAACACTTCCCCCAAGGCTGTaGTGGGCGGCGGGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: ATCVVGFTESLCGWTMGTLPPRL*WAAGQR Trigger: CCTCTGCCCCGCCGCCCAGCACAGCCTTGGGGGAAG...TGTTCCCATTGTCCACCCACACAAACTCTCTGTGAAACCCACCACACAGGTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR-3UTR CCA 90 bp | GCTTATTACATGAGCTGCTTCGGGGCACTGACATCTGATTTCTGGTCATGTTTTCCCCCAAGGCTGTGCTaGGCGGCGGGGCAGAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: AYYMSCFGALTSDFWSCFPPRLC*AAGQRS Trigger: TGACCTCTGCCCCGCCGCCCAGCACAGCCTTGGGGG...AAAACATGACCAGAAATCAGATGTCAGTGCCCCGAAGCAGCTCATGTAATAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR CAA 90 bp | AATGCCTCTCTCGGAGCCACCTGTGTGGTGGGTTTCACAGAGAGTTaGTGTGGGTGGACAATGGGAACACCTATGCATACAACTGATAGG | + |
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Preference number: 2 (lower is better) Translates to: NASLGATCVVGFTES*CGWTMGTPMHTTDR Trigger: CCTATCAGTTGTATGCATAGGTGTTCCCATTGTCCACCCACACAAACTCTCTGTGAAACCCACCACACAGGTGGCTCCGAGAGAGGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR-3UTR TCA 90 bp | TGCCTCTCTCGGAGCCACCTGTGTGGTGGGTTTCACAGAGAGTTTGTGTGGGTGGTTCTTTGTAAGAAGTaGTACCATCACGAGGACCAT | + |
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Preference number: 2 (lower is better) Translates to: CLSRSHLCGGFHREFVWVVLCKK*YHHEDH Trigger: ATGGTCCTCGTGATGGTATCACTTCTTACAAAGAAC...CACCCACACAAACTCTCTGTGAAACCCACCACACAGGTGGCTCCGAGAGAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR-3UTR CCA 90 bp | TATTACATGAGCTGCTTCGGGGCACTGACATCTGATTTCTGGTCATGTTTTTCTGATGAGGGACCACTGTaGGAGGGGGCTGAGTCCATT | + |
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Preference number: 2 (lower is better) Translates to: YYMSCFGALTSDFWSCFSDEGPL*EGAESI Trigger: AATGGACTCAGCCCCCTCCCACAGTGGTCCCTCATC...AGAAAAACATGACCAGAAATCAGATGTCAGTGCCCCGAAGCAGCTCATGTAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR CAA 90 bp | GTGGGTGGACAATGGGAACACCTATGCATACAACTGATAGGGGATTaGGAAATCCCCCGATGCTATGACTGCACCTTCGACTTTAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: VGGQWEHLCIQLIGD*EIPRCYDCTFDFSQ Trigger: TTGACTAAAGTCGAAGGTGCAGTCATAGCATCGGGGGATTTCCAAATCCCCTATCAGTTGTATGCATAGGTGTTCCCATTGTCCACCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR-3UTR TCA 90 bp | TATTACATGAGCTGCTTCGGGGCACTGACATCTGATTTCTGGTCATGTTTTTCTACTGTGGGAGGGGGCTaGGTCCATTTGGTTTCGTTC | + |
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Preference number: 2 (lower is better) Translates to: YYMSCFGALTSDFWSCFSTVGGG*VHLVSF Trigger: GAACGAAACCAAATGGACTCAGCCCCCTCCCACAGT...AGAAAAACATGACCAGAAATCAGATGTCAGTGCCCCGAAGCAGCTCATGTAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR-3UTR GCA 90 bp | GCTTATTACATGAGCTGCTTCGGGGCACTGACATCTGATTTCTGGTCATGTTTTCCATCACGAGGACCATaGCATGCAACCTTAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: AYYMSCFGALTSDFWSCFPSRGP*HATLET Trigger: TGTCTCTAAGGTTGCATGGCATGGTCCTCGTGATGG...AAAACATGACCAGAAATCAGATGTCAGTGCCCCGAAGCAGCTCATGTAATAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR-3UTR GCA 90 bp | ACCTTTAATAACACGAGTGCTTATTACATGAGCTGCTTCGGGGCACTGACATCTACACTTAAAGGTGAATaGCTCTCTCGGAGCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: TFNNTSAYYMSCFGALTSTLKGE*LSRSHL Trigger: CAGGTGGCTCCGAGAGAGGCATTCACCTTTAAGTGT...AGATGTCAGTGCCCCGAAGCAGCTCATGTAATAAGCACTCGTGTTATTAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR GCA 72 bp | CTGATAGGGGATTTGGAAATCCCCCGATGCTATGACTaGACCTTCGACTTTAGTCAAGTCCTTTCCCAAGGA | + |
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Preference number: 3 (lower is better) Translates to: LIGDLEIPRCYD*TFDFSQVLSQG Trigger: TCCTTGGGAAAGGACTTGACTAAAGTCGAAGGTGCAGTCATAGCATCGGGGGATTTCCAAATCCCCTATCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR GCA 72 bp | CAGAGAGTTTGTGTGGGTGGACAATGGGAACACCTATaGATACAACTGATAGGGGATTTGGAAATCCCCCGA | + |
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Preference number: 3 (lower is better) Translates to: QRVCVGGQWEHL*IQLIGDLEIPR Trigger: TCGGGGGATTTCCAAATCCCCTATCAGTTGTATGCATAGGTGTTCCCATTGTCCACCCACACAAACTCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR CCA 72 bp | ACCTGTGTGGTGGGTTTCACAGAGAGTTTGTGTGGGTaGACAATGGGAACACCTATGCATACAACTGATAGG | + |
|
Preference number: 3 (lower is better) Translates to: TCVVGFTESLCG*TMGTPMHTTDR Trigger: CCTATCAGTTGTATGCATAGGTGTTCCCATTGTCCACCCACACAAACTCTCTGTGAAACCCACCACACAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR CCA 72 bp | TGGTGGGTTTCACAGAGAGTTTGTGTGGGTGGACAATaGGAACACCTATGCATACAACTGATAGGGGATTTG | + |
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Preference number: 3 (lower is better) Translates to: WWVSQRVCVGGQ*EHLCIQLIGDL Trigger: CAAATCCCCTATCAGTTGTATGCATAGGTGTTCCCATTGTCCACCCACACAAACTCTCTGTGAAACCCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR GCA 72 bp | TGCATACAACTGATAGGGGATTTGGAAATCCCCCGATaGTATGACTGCACCTTCGACTTTAGTCAAGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: CIQLIGDLEIPR*YDCTFDFSQVL Trigger: AAGGACTTGACTAAAGTCGAAGGTGCAGTCATAGCATCGGGGGATTTCCAAATCCCCTATCAGTTGTATGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR GCA 72 bp | ATTTCTGGTCATGTTTTTCTAACACTTAAAGGTGAATaGCTCTCTCGGAGCCACCTGTGTGGTGGGTTTCAC | + |
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Preference number: 3 (lower is better) Translates to: ISGHVFLTLKGE*LSRSHLCGGFH Trigger: GTGAAACCCACCACACAGGTGGCTCCGAGAGAGGCATTCACCTTTAAGTGTTAGAAAAACATGACCAGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR GCA 72 bp | AAAACCTTTAATAACACGAGTGCTTATTACATGAGCTaGTTCGGGGCACTGACATCTGATTTCTGGTCATGT | + |
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Preference number: 3 (lower is better) Translates to: KTFNNTSAYYMS*FGALTSDFWSC Trigger: ACATGACCAGAAATCAGATGTCAGTGCCCCGAAGCAGCTCATGTAATAAGCACTCGTGTTATTAAAGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CCA 90 bp | CGAGGACCATGCCATGCAACCTTAGAGACATCTGTGTACACTTCCCCCAAGGCTTGCGGTGGAACTCGCTaGCAGCCACGCAGAGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: RGPCHATLETSVYTSPKACGGTR*QPRRVP Trigger: GGGGACTCTGCGTGGCTGCCAGCGAGTTCCACCGCA...AGCCTTGGGGGAAGTGTACACAGATGTCTCTAAGGTTGCATGGCATGGTCCTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CCA 90 bp | ATTAAGGGACCAGCGAGAAAAGTCGGGGGAAGTGGACGGGTTAAGGTCTGGGGGGGATGGGAAAGACGCTaGAGGCCCTCACAGCTCGTA | + |
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Preference number: 4 (lower is better) Translates to: IKGPARKVGGSGRVKVWGGWERR*RPSQLV Trigger: TACGAGCTGTGAGGGCCTCCAGCGTCTTTCCCATCC...CCCCCAGACCTTAACCCGTCCACTTCCCCCGACTTTTCTCGCTGGTCCCTTAAT 58% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR GCA 90 bp | GGGATGAGGGACCACTGTGGGAGGGGGCTGAGTCCATTTGGTTTCGTTCTTTGTCTGAGGATCACACTGTaGCTGCTGCGGTGGAACTCG | + |
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Preference number: 4 (lower is better) Translates to: GMRDHCGRGLSPFGFVLCLRITL*LLRWNS Trigger: CGAGTTCCACCGCAGCAGGCACAGTGTGATCCTCAG...ACAAAGAACGAAACCAAATGGACTCAGCCCCCTCCCACAGTGGTCCCTCATCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CCA 90 bp | CCATCACGAGGACCATGCCATGCAACCTTAGAGACATCTGTGTACACTTCCCCCGAGATCTGGGTTCAGTaGAGCGAGAACTTGACCGTC | + |
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Preference number: 4 (lower is better) Translates to: PSRGPCHATLETSVYTSPEIWVQ*SENLTV Trigger: GACGGTCAAGTTCTCGCTCCACTGAACCCAGATCTC...GGGGGAAGTGTACACAGATGTCTCTAAGGTTGCATGGCATGGTCCTCGTGATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CCA 90 bp | TGCAACCTTAGAGACATCTGTGTACACTTCCCCCAAGGCTGTGCTGGGCGGCGGAACTGTAGAAAAGCATaGTCCCGGTCAGAGTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: CNLRDICVHFPQGCAGRRNCRKA*SRSELR Trigger: TCTCAACTCTGACCGGGACCATGCTTTTCTACAGTT...CCGCCGCCCAGCACAGCCTTGGGGGAAGTGTACACAGATGTCTCTAAGGTTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| 3UTR CAA 72 bp | CTCGGAGCCACCTGTGTGGTGGGTTTCACAGAGAGTTaGTGTGGGTGGACAATGGGAACACCTATGCATACA | + |
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Preference number: 4 (lower is better) Translates to: LGATCVVGFTES*CGWTMGTPMHT Trigger: TGTATGCATAGGTGTTCCCATTGTCCACCCACACAAACTCTCTGTGAAACCCACCACACAGGTGGCTCCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR TCA 90 bp | GCCACCTGTGTGGTGGGTTTCACAGAGAGTTTGTGTGGGTGGACAATGGGAACAAGTGGAGCGAGAACTTaGCCGTCTTCGGAATCTATA | + |
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Preference number: 4 (lower is better) Translates to: ATCVVGFTESLCGWTMGTSGART*PSSESI Trigger: TATAGATTCCGAAGACGGTCAAGTTCTCGCTCCACT...TGTTCCCATTGTCCACCCACACAAACTCTCTGTGAAACCCACCACACAGGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR GCA 90 bp | GCCACCTGTGTGGTGGGTTTCACAGAGAGTTTGTGTGGGTGGACAATGGGAACAAGTGATCGATTTTCTTaGACACGCCTCGGAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: ATCVVGFTESLCGWTMGTSDRFS*TRLGKL Trigger: GAGCTTTCCGAGGCGTGTGCAAGAAAATCGATCACT...TGTTCCCATTGTCCACCCACACAAACTCTCTGTGAAACCCACCACACAGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR GCA 90 bp | ATGAGGGACCACTGTGGGAGGGGGCTGAGTCCATTTGGTTTCGTTCTTTGTAAGTTTTTAGAGTCCCTCTaGCCAGGGTCTCCAGCATTG | + |
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Preference number: 4 (lower is better) Translates to: MRDHCGRGLSPFGFVLCKFLESL*PGSPAL Trigger: CAATGCTGGAGACCCTGGGCAGAGGGACTCTAAAAA...CTTACAAAGAACGAAACCAAATGGACTCAGCCCCCTCCCACAGTGGTCCCTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR TCA 90 bp | ATGAGGGACCACTGTGGGAGGGGGCTGAGTCCATTTGGTTTCGTTCTTTGTAAGGTCTCCAGCATTGGCTaGGATATAAACTATGATGCC | + |
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Preference number: 4 (lower is better) Translates to: MRDHCGRGLSPFGFVLCKVSSIG*DINYDA Trigger: GGCATCATAGTTTATATCTCAGCCAATGCTGGAGAC...CTTACAAAGAACGAAACCAAATGGACTCAGCCCCCTCCCACAGTGGTCCCTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR TCA 90 bp | GCCACCTGTGTGGTGGGTTTCACAGAGAGTTTGTGTGGGTGGACAATGGGAACACGGATTGTTATGCAATaGCTCTTTGAACTCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: ATCVVGFTESLCGWTMGTRIVMQ*LFELFG Trigger: CCCAAAGAGTTCAAAGAGTCATTGCATAACAATCCG...TGTTCCCATTGTCCACCCACACAAACTCTCTGTGAAACCCACCACACAGGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR TCA 90 bp | CATTTGGTTTCGTTCTTTGTAAGAAGTGATACCATCACGAGGACCATGCCATGCCTTCTTCAGGAGCTCTaGATGGGATCTGGCACGCAA | + |
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Preference number: 4 (lower is better) Translates to: HLVSFFVRSDTITRTMPCLLQEL*MGSGTQ Trigger: TTGCGTGCCAGATCCCATTCAGAGCTCCTGAAGAAG...GCATGGCATGGTCCTCGTGATGGTATCACTTCTTACAAAGAACGAAACCAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR GCA 90 bp | GTAACATTAAGGGACCAGCGAGAAAAGTCGGGGGAAGTGGACGGGTTAAGGTCTATCCTGTTCATAGTCTaGATCTTCTGGGAAGTGATC | + |
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Preference number: 4 (lower is better) Translates to: VTLRDQREKSGEVDGLRSILFIV*IFWEVI Trigger: GATCACTTCCCAGAAGATGCAGACTATGAACAGGAT...AGACCTTAACCCGTCCACTTCCCCCGACTTTTCTCGCTGGTCCCTTAATGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CCA 90 bp | GTAACATTAAGGGACCAGCGAGAAAAGTCGGGGGAAGTGGACGGGTTAAGGTCTGTAGTGATCAACATCTaGATACCTCTGTCACACATC | + |
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Preference number: 4 (lower is better) Translates to: VTLRDQREKSGEVDGLRSVVINI*IPLSHI Trigger: GATGTGTGACAGAGGTATCCAGATGTTGATCACTAC...AGACCTTAACCCGTCCACTTCCCCCGACTTTTCTCGCTGGTCCCTTAATGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CCA 90 bp | AGTGATACCATCACGAGGACCATGCCATGCAACCTTAGAGACATCTGTGTACACCTCCACAACCCGGAGTaGGTCATTACTTCTTCATTC | + |
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Preference number: 4 (lower is better) Translates to: SDTITRTMPCNLRDICVHLHNPE*VITSSF Trigger: GAATGAAGAAGTAATGACCCACTCCGGGTTGTGGAG...GTGTACACAGATGTCTCTAAGGTTGCATGGCATGGTCCTCGTGATGGTATCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CCA 90 bp | ACCTTTAATAACACGAGTGCTTATTACATGAGCTGCTTCGGGGCACTGACATCTTTCAGGAGCTCTGAATaGGATCTGGCACGCAACTGC | + |
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Preference number: 4 (lower is better) Translates to: TFNNTSAYYMSCFGALTSFRSSE*DLARNC Trigger: GCAGTTGCGTGCCAGATCCCATTCAGAGCTCCTGAA...AGATGTCAGTGCCCCGAAGCAGCTCATGTAATAAGCACTCGTGTTATTAAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR TCA 90 bp | ACAATGGGAACACCTATGCATACAACTGATAGGGGATTTGGAAATCCCCCGATGGCATCTTCTGGGAAGTaGTCGATTTTCTTGCACACG | + |
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Preference number: 4 (lower is better) Translates to: TMGTPMHTTDRGFGNPPMASSGK*SIFLHT Trigger: CGTGTGCAAGAAAATCGATCACTTCCCAGAAGATGC...CATCGGGGGATTTCCAAATCCCCTATCAGTTGTATGCATAGGTGTTCCCATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR GCA 90 bp | AGGACCATGCCATGCAACCTTAGAGACATCTGTGTACACTTCCCCCAAGGCTGTTTGGCCGGATTGTTATaGAATGACTCTTTGAACTCT | + |
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Preference number: 4 (lower is better) Translates to: RTMPCNLRDICVHFPQGCLAGLL*NDSLNS Trigger: AGAGTTCAAAGAGTCATTGCATAACAATCCGGCCAA...ACAGCCTTGGGGGAAGTGTACACAGATGTCTCTAAGGTTGCATGGCATGGTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CCA 90 bp | AGTTTGTGTGGGTGGACAATGGGAACACCTATGCATACAACTGATAGGGGATTTTCCTGCACACACCTCTaGAATATAGCCAGTAGTCCG | + |
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Preference number: 4 (lower is better) Translates to: SLCGWTMGTPMHTTDRGFSCTHL*NIASSP Trigger: CGGACTACTGGCTATATTCCAGAGGTGTGTGCAGGA...AAATCCCCTATCAGTTGTATGCATAGGTGTTCCCATTGTCCACCCACACAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CCA 90 bp | CATTTGGTTTCGTTCTTTGTAAGAAGTGATACCATCACGAGGACCATGCCATGCAAAGGTCTCGAGATCTaGGTTCAGTGGAGCGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: HLVSFFVRSDTITRTMPCKGLEI*VQWSEN Trigger: GTTCTCGCTCCACTGAACCCAGATCTCGAGACCTTT...GCATGGCATGGTCCTCGTGATGGTATCACTTCTTACAAAGAACGAAACCAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR GCA 90 bp | CATTTGGTTTCGTTCTTTGTAAGAAGTGATACCATCACGAGGACCATGCCATGCATAGCCAGTAGTCCGTaGCCACTGCAATGGTCATTA | + |
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Preference number: 4 (lower is better) Translates to: HLVSFFVRSDTITRTMPCIASSP*PLQWSL Trigger: TAATGACCATTGCAGTGGGCACGGACTACTGGCTAT...GCATGGCATGGTCCTCGTGATGGTATCACTTCTTACAAAGAACGAAACCAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CCA 90 bp | AACACTTGGCACAGATACACAGAGAGGGGTAACATTAAGGGACCAGCGAGAAAATTGGGTGTGGAGTTGTaGAACTGTAGAAAAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: NTWHRYTERGNIKGPARKLGVEL*NCRKAW Trigger: CCATGCTTTTCTACAGTTCCACAACTCCACACCCAA...TTTTCTCGCTGGTCCCTTAATGTTACCCCTCTCTGTGTATCTGTGCCAAGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR TCA 90 bp | AACACTTGGCACAGATACACAGAGAGGGGTAACATTAAGGGACCAGCGAGAAAATATGCAATGACTCTTTaGACTCTTTGGGTGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: NTWHRYTERGNIKGPARKYAMTL*TLWVWS Trigger: ACTCCACACCCAAAGAGTTCAAAGAGTCATTGCATA...TTTTCTCGCTGGTCCCTTAATGTTACCCCTCTCTGTGTATCTGTGCCAAGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CCA 90 bp | AGTGATACCATCACGAGGACCATGCCATGCAACCTTAGAGACATCTGTGTACACATAGTCTGCATCTTCTaGGAAGTGATCGATTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SDTITRTMPCNLRDICVHIVCIF*EVIDFL Trigger: AAGAAAATCGATCACTTCCCAGAAGATGCAGACTAT...GTGTACACAGATGTCTCTAAGGTTGCATGGCATGGTCCTCGTGATGGTATCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CAA 90 bp | CTTAGAGACATCTGTGTACACTTCCCCCAAGGCTGTGCTGGGCGGCGGGGCAGACAGTGGAGCGAGAACTaGACCGTCTTCGGAATCTAT | + |
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Preference number: 5 (lower is better) Translates to: LRDICVHFPQGCAGRRGRQWSEN*TVFGIY Trigger: ATAGATTCCGAAGACGGTCAAGTTCTCGCTCCACTG...TCTGCCCCGCCGCCCAGCACAGCCTTGGGGGAAGTGTACACAGATGTCTCTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS TCA 90 bp | GATGGGAGAAAGGTCTCGAGATCTGGGTTCAGTGGAGCGAGAACTTaGCCGTCTTCGGAATCTATACCTGTAGGGCGGCAGGCGCGCAAA | + |
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Preference number: 5 (lower is better) Translates to: DGRKVSRSGFSGART*PSSESIPVGRQARK Trigger: TTTGCGCGCCTGCCGCCCTACAGGTATAGATTCCGAAGACGGTCAAGTTCTCGCTCCACTGAACCCAGATCTCGAGACCTTTCTCCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS CCA 90 bp | TCCCGGGAGAGGGTGAACATGGAGATGTCGGTGGAAGGGATGGTGTaGAAGCCTTTGCTGATGGGAGAAAGGTCTCGAGATCTGGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: SRERVNMEMSVEGMV*KPLLMGERSRDLGS Trigger: TGAACCCAGATCTCGAGACCTTTCTCCCATCAGCAAAGGCTTCCACACCATCCCTTCCACCGACATCTCCATGTTCACCCTCTCCCGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CAA 90 bp | CCATCACGAGGACCATGCCATGCAACCTTAGAGACATCTGTGTACACTTCCCCCTGGTCCCGGTCAGAGTaGAGAAGGGTCCCCATGGTA | + |
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Preference number: 5 (lower is better) Translates to: PSRGPCHATLETSVYTSPWSRSE*RRVPMV Trigger: TACCATGGGGACCCTTCTCAACTCTGACCGGGACCA...GGGGGAAGTGTACACAGATGTCTCTAAGGTTGCATGGCATGGTCCTCGTGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CAA 90 bp | TGCACCTTCGACTTTAGTCAAGTCCTTTCCCAAGGAGGGAAGAATGTCGTGGTCATGATGCCGATGATGTaGCTTAGCCCTGCAGAGACG | + |
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Preference number: 5 (lower is better) Translates to: CTFDFSQVLSQGGKNVVVMMPMM*LSPAET Trigger: CGTCTCTGCAGGGCTAAGCAACATCATCGGCATCAT...GACCACGACATTCTTCCCTCCTTGGGAAAGGACTTGACTAAAGTCGAAGGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS CCA 90 bp | TCTTTGAACTCTTTGGGTGTGGAGTTGTGGAACTGTAGAAAAGCATaGTCCCGGTCAGAGTTGAGAAGGGTCCCCATGGTAAGCTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: SLNSLGVELWNCRKA*SRSELRRVPMVSLE Trigger: CTCTAAGCTTACCATGGGGACCCTTCTCAACTCTGACCGGGACCATGCTTTTCTACAGTTCCACAACTCCACACCCAAAGAGTTCAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CAA 90 bp | TCAAGTCCTTTCCCAAGGAGGGAAGAATGTCGTGGTCCTTCCAGGAAAGAAGGAGACTCTTTGAACTCTTaGGGTGTGGAGTTGTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: SSPFPRREECRGPSRKEGDSLNS*GVELWN Trigger: GTTCCACAACTCCACACCCAAAGAGTTCAAAGAGTC...TCCTTCTTTCCTGGAAGGACCACGACATTCTTCCCTCCTTGGGAAAGGACTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS TCA 90 bp | CAGGCGTGGTACGTCTGTTGGCCGGATTGTTATGCAATGACTCTTTaGACTCTTTGGGTGTGGAGTTGTGGAACTGTAGAAAAGCATGGT | + |
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Preference number: 5 (lower is better) Translates to: QAWYVCWPDCYAMTL*TLWVWSCGTVEKHG Trigger: ACCATGCTTTTCTACAGTTCCACAACTCCACACCCAAAGAGTTCAAAGAGTCATTGCATAACAATCCGGCCAACAGACGTACCACGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CAA 90 bp | CGAGGACCATGCCATGCAACCTTAGAGACATCTGTGTACACTTCCCCCAAGGCTTTCCTGCTGGTTTCATaGTCACTTGTAGATTTAGTC | + |
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Preference number: 5 (lower is better) Translates to: RGPCHATLETSVYTSPKAFLLVS*SLVDLV Trigger: GACTAAATCTACAAGTGACAATGAAACCAGCAGGAA...AGCCTTGGGGGAAGTGTACACAGATGTCTCTAAGGTTGCATGGCATGGTCCTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS CCA 90 bp | GGATTGTTATGCAATGACTCTTTGAACTCTTTGGGTGTGGAGTTGTaGAACTGTAGAAAAGCATGGTCCCGGTCAGAGTTGAGAAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: GLLCNDSLNSLGVEL*NCRKAWSRSELRRV Trigger: GACCCTTCTCAACTCTGACCGGGACCATGCTTTTCTACAGTTCCACAACTCCACACCCAAAGAGTTCAAAGAGTCATTGCATAACAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CAA 90 bp | AGTTTGTGTGGGTGGACAATGGGAACACCTATGCATACAACTGATAGGGGATTTATGGTGTGGAAGCCTTaGCTGATGGGAGAAAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SLCGWTMGTPMHTTDRGFMVWKP*LMGERS Trigger: AGACCTTTCTCCCATCAGCAAAGGCTTCCACACCAT...AAATCCCCTATCAGTTGTATGCATAGGTGTTCCCATTGTCCACCCACACAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CAA 90 bp | TGCACCTTCGACTTTAGTCAAGTCCTTTCCCAAGGAGGGAAGAATGTCGTGGTCTTATGCAATGACTCTTaGAACTCTTTGGGTGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: CTFDFSQVLSQGGKNVVVLCNDS*NSLGVE Trigger: CTCCACACCCAAAGAGTTCAAAGAGTCATTGCATAA...GACCACGACATTCTTCCCTCCTTGGGAAAGGACTTGACTAAAGTCGAAGGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS-3UTR CAA 90 bp | AGTTTGTGTGGGTGGACAATGGGAACACCTATGCATACAACTGATAGGGGATTTCGTCTGTTGGCCGGATaGTTATGCAATGACTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: SLCGWTMGTPMHTTDRGFRLLAG*LCNDSL Trigger: CAAAGAGTCATTGCATAACAATCCGGCCAACAGACG...AAATCCCCTATCAGTTGTATGCATAGGTGTTCCCATTGTCCACCCACACAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS TCA 72 bp | CGGCAGGCGCGCAAATGTAGACTTCTTCAGGAGCTCTaGATGGGATCTGGCACGCAACTGCTGATGCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: RQARKCRLLQEL*MGSGTQLLMLL Trigger: GAGAAGCATCAGCAGTTGCGTGCCAGATCCCATTCAGAGCTCCTGAAGAAGTCTACATTTGCGCGCCTGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS TCA 72 bp | AAGGTCTCGAGATCTGGGTTCAGTGGAGCGAGAACTTaGCCGTCTTCGGAATCTATACCTGTAGGGCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: KVSRSGFSGART*PSSESIPVGRQ Trigger: CTGCCGCCCTACAGGTATAGATTCCGAAGACGGTCAAGTTCTCGCTCCACTGAACCCAGATCTCGAGACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS CAA 72 bp | AAAGGTCTCGAGATCTGGGTTCAGTGGAGCGAGAACTaGACCGTCTTCGGAATCTATACCTGTAGGGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: KGLEIWVQWSEN*TVFGIYTCRAA Trigger: TGCCGCCCTACAGGTATAGATTCCGAAGACGGTCAAGTTCTCGCTCCACTGAACCCAGATCTCGAGACCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS TCA 72 bp | AGGCGTGGTACGTCTGTTGGCCGGATTGTTATGCAATaGCTCTTTGAACTCTTTGGGTGTGGAGTTGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: RRGTSVGRIVMQ*LFELFGCGVVE Trigger: TTCCACAACTCCACACCCAAAGAGTTCAAAGAGTCATTGCATAACAATCCGGCCAACAGACGTACCACGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS CAA 90 bp | GCCGGATTGTTATGCAATGACTCTTTGAACTCTTTGGGTGTGGAGTaGTGGAACTGTAGAAAAGCATGGTCCCGGTCAGAGTTGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: AGLLCNDSLNSLGVE*WNCRKAWSRSELRR Trigger: CCTTCTCAACTCTGACCGGGACCATGCTTTTCTACAGTTCCACAACTCCACACCCAAAGAGTTCAAAGAGTCATTGCATAACAATCCGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS CAA 90 bp | ACAGGCGTGGTACGTCTGTTGGCCGGATTGTTATGCAATGACTCTTaGAACTCTTTGGGTGTGGAGTTGTGGAACTGTAGAAAAGCATGG | + |
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Preference number: 6 (lower is better) Translates to: TGVVRLLAGLLCNDS*NSLGVELWNCRKAW Trigger: CCATGCTTTTCTACAGTTCCACAACTCCACACCCAAAGAGTTCAAAGAGTCATTGCATAACAATCCGGCCAACAGACGTACCACGCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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| CDS TCA 72 bp | TACGTCTGTTGGCCGGATTGTTATGCAATGACTCTTTaGACTCTTTGGGTGTGGAGTTGTGGAACTGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: YVCWPDCYAMTL*TLWVWSCGTVE Trigger: TTCTACAGTTCCACAACTCCACACCCAAAGAGTTCAAAGAGTCATTGCATAACAATCCGGCCAACAGACGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084615.10 |
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