Pregenerated sensors for CACNG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019146Ensembl transcript IDs: ENSMUST00000019290.3
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCGCCACCTCCAGGCACCTAACAGACAGGGGCGGACCAAGGGCTTaGGTCACCTGGAGGCCTGCAACTGCCTTATTGGTGCTGGATAGA | + |
|
Preference number: 1 (lower is better) Translates to: CATSRHLTDRGGPRA*VTWRPATALLVLDR Trigger: TCTATCCAGCACCAATAAGGCAGTTGCAGGCCTCCAGGTGACTCAAGCCCTTGGTCCGCCCCTGTCTGTTAGGTGCCTGGAGGTGGCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 90 bp | ATGGGGTCTGAGGCCTCCCCTGAACTTCTGGGCTGGCCTAGCAGGTaGTCTGTCTTGCTGCTGACCTGGGAGACGAGTGTTCCTCTTCCA | + |
|
Preference number: 1 (lower is better) Translates to: MGSEASPELLGWPSR*SVLLLTWETSVPLP Trigger: TGGAAGAGGAACACTCGTCTCCCAGGTCAGCAGCAAGACAGACCACCTGCTAGGCCAGCCCAGAAGTTCAGGGGAGGCCTCAGACCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR GCA 90 bp | CAAGCAGGCCGGTGTCAGGGTAGCAAAGACAGGCAGGAGGCTGGTTaGTGTAGTTGGGGGAGGGGTGAGGTTGCTAGGAAATGGTTAGCC | + |
|
Preference number: 1 (lower is better) Translates to: QAGRCQGSKDRQEAG*CSWGRGEVARKWLA Trigger: GGCTAACCATTTCCTAGCAACCTCACCCCTCCCCCAACTACAGCAACCAGCCTCCTGCCTGTCTTTGCTACCCTGACACCGGCCTGCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR TCA 90 bp | GGAAGATGCTCTGATCTCCCTGCATGTTTAACTGGCCCACATATCTaGGCCATGGGGTCTGAGGCCTCCCCTGAACTTCTGGGCTGGCCT | + |
|
Preference number: 1 (lower is better) Translates to: GRCSDLPACLTGPHI*AMGSEASPELLGWP Trigger: AGGCCAGCCCAGAAGTTCAGGGGAGGCCTCAGACCCCATGGCTCAGATATGTGGGCCAGTTAAACATGCAGGGAGATCAGAGCATCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 90 bp | GCGGACCAAGGGCTTGAGTCACCTGGAGGCCTGCAACTGCCTTATTaGTGCTGGATAGAGTTGGTCGCAGAGCCATTGAACTTCTCCAGC | + |
|
Preference number: 1 (lower is better) Translates to: ADQGLESPGGLQLPY*CWIELVAEPLNFSS Trigger: GCTGGAGAAGTTCAATGGCTCTGCGACCAACTCTATCCAGCACCAATAAGGCAGTTGCAGGCCTCCAGGTGACTCAAGCCCTTGGTCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR TCA 90 bp | CTAGCCCTTCCTTGGTCAGCCACTGCTCATATTACCTCTCACCCATaGGTCTTGTTTGGGTGGCCTGACCCCAGGTCTCACTTCCTGGGA | + |
|
Preference number: 1 (lower is better) Translates to: LALPWSATAHITSHP*VLFGWPDPRSHFLG Trigger: TCCCAGGAAGTGAGACCTGGGGTCAGGCCACCCAAACAAGACTCATGGGTGAGAGGTAATATGAGCAGTGGCTGACCAAGGAAGGGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 90 bp | GCTTTGGAGGGCACAGGTCAGCTGCCTCTGAGCCACATTCCTAACTaGGTATTGAATGGGAACTTGGGTGGCGGTTGCAGCACTGAGACT | + |
|
Preference number: 1 (lower is better) Translates to: ALEGTGQLPLSHIPN*VLNGNLGGGCSTET Trigger: AGTCTCAGTGCTGCAACCGCCACCCAAGTTCCCATTCAATACCCAGTTAGGAATGTGGCTCAGAGGCAGCTGACCTGTGCCCTCCAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 90 bp | GAGGCTGGTTGCTGTAGTTGGGGGAGGGGTGAGGTTGCTAGGAAATaGTTAGCCAGGTTCTCATTGTCTGATCTGGCCCTTGCCACTCTG | + |
|
Preference number: 1 (lower is better) Translates to: EAGCCSWGRGEVARK*LARFSLSDLALATL Trigger: CAGAGTGGCAAGGGCCAGATCAGACAATGAGAACCTGGCTAACCATTTCCTAGCAACCTCACCCCTCCCCCAACTACAGCAACCAGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR GCA 90 bp | GACCAAGGGCTTGAGTCACCTGGAGGCCTGCAACTGCCTTATTGGTaGTGGATAGAGTTGGTCGCAGAGCCATTGAACTTCTCCAGCATC | + |
|
Preference number: 1 (lower is better) Translates to: DQGLESPGGLQLPYW*WIELVAEPLNFSSI Trigger: GATGCTGGAGAAGTTCAATGGCTCTGCGACCAACTCTATCCAGCACCAATAAGGCAGTTGCAGGCCTCCAGGTGACTCAAGCCCTTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR GCA 90 bp | AGTGGCGGATGTGTGGGTCTCCTCTCTCCATTAGCAATACCTCCCTaGAGGCAAGAAGAGCCTCTTTCTCCAGTCCCCAGAAAGATGGTG | + |
|
Preference number: 1 (lower is better) Translates to: SGGCVGLLSPLAIPP*RQEEPLSPVPRKMV Trigger: CACCATCTTTCTGGGGACTGGAGAAAGAGGCTCTTCTTGCCTGCAGGGAGGTATTGCTAATGGAGAGAGGAGACCCACACATCCGCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 90 bp | CAAGGGCTTGAGTCACCTGGAGGCCTGCAACTGCCTTATTGGTGCTaGATAGAGTTGGTCGCAGAGCCATTGAACTTCTCCAGCATCCCA | + |
|
Preference number: 1 (lower is better) Translates to: QGLESPGGLQLPYWC*IELVAEPLNFSSIP Trigger: TGGGATGCTGGAGAAGTTCAATGGCTCTGCGACCAACTCTATCCAGCACCAATAAGGCAGTTGCAGGCCTCCAGGTGACTCAAGCCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 90 bp | TTTCCTGTGTCTCTAGGCCTTTATCTGGTATGGTTTGGAATCTGCTaGGCCTTGGGCAGGGCTGAGGAGGGACAAGGTGCTGTTTTTGCC | + |
|
Preference number: 1 (lower is better) Translates to: FPVSLGLYLVWFGIC*ALGRAEEGQGAVFA Trigger: GGCAAAAACAGCACCTTGTCCCTCCTCAGCCCTGCCCAAGGCCCAGCAGATTCCAAACCATACCAGATAAAGGCCTAGAGACACAGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 90 bp | TTGTTTGTAGGACCCTTTCCTGTGTCTCTAGGCCTTTATCTGGTATaGTTTGGAATCTGCTGGGCCTTGGGCAGGGCTGAGGAGGGACAA | + |
|
Preference number: 1 (lower is better) Translates to: LFVGPFPVSLGLYLV*FGICWALGRAEEGQ Trigger: TTGTCCCTCCTCAGCCCTGCCCAAGGCCCAGCAGATTCCAAACCATACCAGATAAAGGCCTAGAGACACAGGAAAGGGTCCTACAAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR TCA 90 bp | CACTGCTCATATTACCTCTCACCCATGAGTCTTGTTTGGGTGGCCTaGCCCCAGGTCTCACTTCCTGGGAAGAAGTCCAATTCGTTCTCA | + |
|
Preference number: 1 (lower is better) Translates to: HCSYYLSPMSLVWVA*PQVSLPGKKSNSFS Trigger: TGAGAACGAATTGGACTTCTTCCCAGGAAGTGAGACCTGGGGTCAGGCCACCCAAACAAGACTCATGGGTGAGAGGTAATATGAGCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR GCA 90 bp | CAAACATTCTTTCCATACAGGGAGATCTCTCACCCCAGAAAGGCCTaGTTTTTCACTGACCTCAAAGATAGCAGGAGACCTATCTCTCAA | + |
|
Preference number: 1 (lower is better) Translates to: QTFFPYREISHPRKA*FFTDLKDSRRPISQ Trigger: TTGAGAGATAGGTCTCCTGCTATCTTTGAGGTCAGTGAAAAAGCAGGCCTTTCTGGGGTGAGAGATCTCCCTGTATGGAAAGAATGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR TCA 90 bp | CGGTGTCAGGGTAGCAAAGACAGGCAGGAGGCTGGTTGCTGTAGTTGGGGGAGGCCAGAGGGGCATCAGTaGGTCCATGGACCCCCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RCQGSKDRQEAGCCSWGRPEGHQ*VHGPPK Trigger: CTTTGGGGGTCCATGGACTCACTGATGCCCCTCTGG...CCTCCCCCAACTACAGCAACCAGCCTCCTGCCTGTCTTTGCTACCCTGACACCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGAGGCACATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGTCTCCCCGTGGCTaGTGTGGTCCCTCCCCCGCC | + |
|
Preference number: 2 (lower is better) Translates to: RRHMVCVCVCVCVCVCVCRSPRG*CGPSPA Trigger: GGCGGGGGAGGGACCACAGCAGCCACGGGGAGACCT...ACACACACACACACACACACACACACACACACACACACACACCATGTGCCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 90 bp | GAGGCCTCCCCTGAACTTCTGGGCTGGCCTAGCAGGTGGTCTGTCTaGCTGCTGACCTGGGAGACGAGTGTTCCTCTTCCAGACACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: EASPELLGWPSRWSV*LLTWETSVPLPDTR Trigger: TCTTGTGTCTGGAAGAGGAACACTCGTCTCCCAGGTCAGCAGCAAGACAGACCACCTGCTAGGCCAGCCCAGAAGTTCAGGGGAGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 90 bp | CCACAGGAAGCACCGCCCCTTCCCTCCAGGCCCCCTAGCCCTTCCTaGGTCAGCCACTGCTCATATTACCTCTCACCCATGAGTCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: PQEAPPLPSRPPSPS*VSHCSYYLSPMSLV Trigger: AACAAGACTCATGGGTGAGAGGTAATATGAGCAGTGGCTGACCAAGGAAGGGCTAGGGGGCCTGGAGGGAAGGGGCGGTGCTTCCTGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR TCA 90 bp | CGGTGTCAGGGTAGCAAAGACAGGCAGGAGGCTGGTTGCTGTAGTTGGGGGAGGTGGTCGCAGAGCCATTaGACTTCTCCAGCATCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RCQGSKDRQEAGCCSWGRWSQSH*TSPASQ Trigger: CTGGGATGCTGGAGAAGTTCAATGGCTCTGCGACCA...CCTCCCCCAACTACAGCAACCAGCCTCCTGCCTGTCTTTGCTACCCTGACACCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR TCA 90 bp | CCCTCCAGGCCCCCTAGCCCTTCCTTGGTCAGCCACTGCTCATATTACCTCTCACTTGTTTGGGTGGCCTaGCCCCAGGTCTCACTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PSRPPSPSLVSHCSYYLSLVWVA*PQVSLP Trigger: AGGAAGTGAGACCTGGGGTCAGGCCACCCAAACAAG...TGAGAGGTAATATGAGCAGTGGCTGACCAAGGAAGGGCTAGGGGGCCTGGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGGCACATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCCTTCCCAGGGGTCTaGGGGCCTGTGAGTGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: RRHMVCVCVCVCVCVCVCPFPGV*GPVSVG Trigger: CCCCACACTCACAGGCCCCCAGACCCCTGGGAAGGG...ACACACACACACACACACACACACACACACACACACACACACCATGTGCCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCTCCAGGCCCCCTAGCCCTTCCTTGGTCAGCCACTGCTCATATTACCTCTCACTGGGCTGGTTTCCATaGCTTTGGAGGGCACAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: PSRPPSPSLVSHCSYYLSLGWFP*LWRAQV Trigger: GACCTGTGCCCTCCAAAGCCATGGAAACCAGCCCAG...TGAGAGGTAATATGAGCAGTGGCTGACCAAGGAAGGGCTAGGGGGCCTGGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 90 bp | CTGCAACTGCCTTATTGGTGCTGGATAGAGTTGGTCGCAGAGCCATaGAACTTCTCCAGCATCCCAGGGCCCAGCCAGGGATCAAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LQLPYWCWIELVAEP*NFSSIPGPSQGSRG Trigger: GCCCCTTGATCCCTGGCTGGGCCCTGGGATGCTGGAGAAGTTCAATGGCTCTGCGACCAACTCTATCCAGCACCAATAAGGCAGTTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 90 bp | GAGTCACCTGGAGGCCTGCAACTGCCTTATTGGTGCTGGATAGAGTaGGTCGCAGAGCCATTGAACTTCTCCAGCATCCCAGGGCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: ESPGGLQLPYWCWIE*VAEPLNFSSIPGPS Trigger: GCTGGGCCCTGGGATGCTGGAGAAGTTCAATGGCTCTGCGACCAACTCTATCCAGCACCAATAAGGCAGTTGCAGGCCTCCAGGTGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTGAGGAGGGACAAGGTGCTGTTTTTGCCCAGTTTGGAAGATGCTCTGATCTCGGCGGACCAAGGGCTTaGGTCACCTGGAGGCCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: AEEGQGAVFAQFGRCSDLGGPRA*VTWRPA Trigger: TGCAGGCCTCCAGGTGACTCAAGCCCTTGGTCCGCC...GAGATCAGAGCATCTTCCAAACTGGGCAAAAACAGCACCTTGTCCCTCCTCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTGAGGAGGGACAAGGTGCTGTTTTTGCCCAGTTTGGAAGATGCTCTGATCTCGGGGTGGGTGTCTCCTaGCTCCAAGGACAGGAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: AEEGQGAVFAQFGRCSDLGVGVS*LQGQEL Trigger: GAGCTCCTGTCCTTGGAGGCAGGAGACACCCACCCC...GAGATCAGAGCATCTTCCAAACTGGGCAAAAACAGCACCTTGTCCCTCCTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTGAGGAGGGACAAGGTGCTGTTTTTGCCCAGTTTGGAAGATGCTCTGATCTCCATTGTTGGGCTCCCTaGGCCCCCAGAGGGGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: AEEGQGAVFAQFGRCSDLHCWAP*APRGAS Trigger: TGATGCCCCTCTGGGGGCCCAGGGAGCCCAACAATG...GAGATCAGAGCATCTTCCAAACTGGGCAAAAACAGCACCTTGTCCCTCCTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCTCCAGGCCCCCTAGCCCTTCCTTGGTCAGCCACTGCTCATATTACCTCTCACTCCCTCTGTCTGCATaGGAGGATAGGTTGCTCACA | + |
|
Preference number: 2 (lower is better) Translates to: PSRPPSPSLVSHCSYYLSLPLSA*EDRLLT Trigger: TGTGAGCAACCTATCCTCCCATGCAGACAGAGGGAG...TGAGAGGTAATATGAGCAGTGGCTGACCAAGGAAGGGCTAGGGGGCCTGGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCTCCAGGCCCCCTAGCCCTTCCTTGGTCAGCCACTGCTCATATTACCTCTCAGTCTTGCTGCTGACCTaGGAGACGAGTGTTCCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: PSRPPSPSLVSHCSYYLSVLLLT*ETSVPL Trigger: AAGAGGAACACTCGTCTCCCAGGTCAGCAGCAAGAC...TGAGAGGTAATATGAGCAGTGGCTGACCAAGGAAGGGCTAGGGGGCCTGGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CCA 90 bp | ATATCTGAGCCATGGGGTCTGAGGCCTCCCCTGAACTTCTGGGCTGGCCTAGCATGCTTTGATTGCTCCTaGCCATTTCCACTGAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ISEPWGLRPPLNFWAGLACFDCS*PFPLSW Trigger: CCAGCTCAGTGGAAATGGCCAGGAGCAATCAAAGCA...TGCTAGGCCAGCCCAGAAGTTCAGGGGAGGCCTCAGACCCCATGGCTCAGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCTGCTTTTTCACTGACCTCAAAGATAGCAGGAGACCTATCTCTCAAAGAAGGGTCTGGGGGCCTGTaGGTGTGGGGGTCCACCATC | + |
|
Preference number: 2 (lower is better) Translates to: RPAFSLTSKIAGDLSLKEGSGGL*VWGSTI Trigger: GATGGTGGACCCCCACACTCACAGGCCCCCAGACCC...TTCTTTGAGAGATAGGTCTCCTGCTATCTTTGAGGTCAGTGAAAAAGCAGGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR GCA 90 bp | CGGTGTCAGGGTAGCAAAGACAGGCAGGAGGCTGGTTGCTGTAGTTGGGGGAGGCCCCGGAGAGTGTTCTaGAAACATTCTTTCCATACA | + |
|
Preference number: 2 (lower is better) Translates to: RCQGSKDRQEAGCCSWGRPRRVF*KHSFHT Trigger: TGTATGGAAAGAATGTTTGCAGAACACTCTCCGGGG...CCTCCCCCAACTACAGCAACCAGCCTCCTGCCTGTCTTTGCTACCCTGACACCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 90 bp | GTGTCTCTAGGCCTTTATCTGGTATGGTTTGGAATCTGCTGGGCCTaGGGCAGGGCTGAGGAGGGACAAGGTGCTGTTTTTGCCCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: VSLGLYLVWFGICWA*GRAEEGQGAVFAQF Trigger: AAACTGGGCAAAAACAGCACCTTGTCCCTCCTCAGCCCTGCCCAAGGCCCAGCAGATTCCAAACCATACCAGATAAAGGCCTAGAGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR TCA 90 bp | CCCTCCAGGCCCCCTAGCCCTTCCTTGGTCAGCCACTGCTCATATTACCTCTCAGTTTGGAAGATGCTCTaGTCTCCCTGCATGTTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: PSRPPSPSLVSHCSYYLSVWKML*SPCMFN Trigger: GTTAAACATGCAGGGAGATCAGAGCATCTTCCAAAC...TGAGAGGTAATATGAGCAGTGGCTGACCAAGGAAGGGCTAGGGGGCCTGGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CCA 90 bp | CGGTGTCAGGGTAGCAAAGACAGGCAGGAGGCTGGTTGCTGTAGTTGGGGGAGGAGCCACATTCCTAACTaGGTATTGAATGGGAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: RCQGSKDRQEAGCCSWGRSHIPN*VLNGNL Trigger: CAAGTTCCCATTCAATACCCAGTTAGGAATGTGGCT...CCTCCCCCAACTACAGCAACCAGCCTCCTGCCTGTCTTTGCTACCCTGACACCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGGCACATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCGATAGCGCTGGGCTaGTTTCCATGGCTTTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RRHMVCVCVCVCVCVCVCSIALG*FPWLWR Trigger: CCTCCAAAGCCATGGAAACCAGCCCAGCGCTATCGA...ACACACACACACACACACACACACACACACACACACACACACCATGTGCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTGGCTCTGTGCCCAGCTCACGTCTCTCCCAATGGATTTTGTTTCTTTATTCTGCTCTATATCCCCTaGGGGTGGGTGTCTCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: SLALCPAHVSPNGFCFFILLYIP*GWVSPA Trigger: GGCAGGAGACACCCACCCCCAGGGGATATAGAGCAG...AATAAAGAAACAAAATCCATTGGGAGAGACGTGAGCTGGGCACAGAGCCAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCTCCAGGCCCCCTAGCCCTTCCTTGGTCAGCCACTGCTCATATTACCTCTCAATAAGAAAGAGCCTTTaGAGCTCAAGCCAATCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: PSRPPSPSLVSHCSYYLSIRKSL*SSSQSV Trigger: GACAGATTGGCTTGAGCTCCAAAGGCTCTTTCTTAT...TGAGAGGTAATATGAGCAGTGGCTGACCAAGGAAGGGCTAGGGGGCCTGGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 90 bp | GCGTTTGGAACTGCGCATCTCCCTCTGTCTGCATGGGAGGATAGGTaGCTCACATGTGTGAATTTTTGCTTTGACACTGGATGTGGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: AFGTAHLPLSAWEDR*LTCVNFCFDTGCGG Trigger: ACCCCCACATCCAGTGTCAAAGCAAAAATTCACACATGTGAGCAACCTATCCTCCCATGCAGACAGAGGGAGATGCGCAGTTCCAAACGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTAGGAATGTTCTTAATGTCATCACAAGGGGCTTGGCAGTaGCCATTGCTCCCCTGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: RERERERERDLGMFLMSSQGAWQ*PLLPWP Trigger: GGGCCAGGGGAGCAATGGTCACTGCCAAGCCCCTTG...TGATGACATTAAGAACATTCCTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCTGCTTTTTCACTGACCTCAAAGATAGCAGGAGACCTATCTCTCAAAGAAGACACAGTGGGAAACTaGGGCCCAGAGAGGCCACAC | + |
|
Preference number: 2 (lower is better) Translates to: RPAFSLTSKIAGDLSLKEDTVGN*GPERPH Trigger: GTGTGGCCTCTCTGGGCCTCAGTTTCCCACTGTGTC...TTCTTTGAGAGATAGGTCTCCTGCTATCTTTGAGGTCAGTGAAAAAGCAGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGGCACATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATCAGGACTGCTTTaGTTGCTCCTGGCCATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: RRHMVCVCVCVCVCVCVCSSGLL*LLLAIS Trigger: GGAAATGGCCAGGAGCAATCAAAGCAGTCCTGATGA...ACACACACACACACACACACACACACACACACACACACACACCATGTGCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTGAGGAGGGACAAGGTGCTGTTTTTGCCCAGTTTGGAAGATGCTCTGATCTCAGGGGGAAACCTGAGTaGTCCCTTAATTCACTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: AEEGQGAVFAQFGRCSDLRGKPE*SLNSLW Trigger: CCAGAGTGAATTAAGGGAGCACTCAGGTTTCCCCCT...GAGATCAGAGCATCTTCCAAACTGGGCAAAAACAGCACCTTGTCCCTCCTCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTAGGAATGTTCTTAATGTCATCAGGTCTGGCTTCTCTGTaGGCCACCAGCAGCCATTCC | + |
|
Preference number: 2 (lower is better) Translates to: RERERERERDLGMFLMSSGLASL*ATSSHS Trigger: GGAATGGCTGCTGGTGGCTCACAGAGAAGCCAGACC...TGATGACATTAAGAACATTCCTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGCCTGCTTTTTCACTGACCTCAAAGATAGCAGGAGACCTATCTCTCAAAGAAAGGATTCCAGGGGTCTaGCTTCTCTGTGAGCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: RPAFSLTSKIAGDLSLKERIPGV*LLCEPP Trigger: TGGTGGCTCACAGAGAAGCCAGACCCCTGGAATCCT...TTCTTTGAGAGATAGGTCTCCTGCTATCTTTGAGGTCAGTGAAAAAGCAGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGAGGCACATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAAAGAAACCTTTTTaGAATGTCATTGTTGGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RRHMVCVCVCVCVCVCVCKKKPF*NVIVGL Trigger: GAGCCCAACAATGACATTGCAAAAAGGTTTCTTTTT...ACACACACACACACACACACACACACACACACACACACACACCATGTGCCTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTAGGAATGTTCTTAATGTCATCACAGTCCCCAGAAAGATaGTGGGGCCTTTCTCCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: RERERERERDLGMFLMSSQSPER*WGLSPF Trigger: AAAAGGAGAAAGGCCCCACCATCTTTCTGGGGACTG...TGATGACATTAAGAACATTCCTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTAGGAATGTTCTTAATGTCATCACAACTGCCTTATTGGTaGTGGATAGAGTTGGTCGCA | + |
|
Preference number: 2 (lower is better) Translates to: RERERERERDLGMFLMSSQLPYW*WIELVA Trigger: TGCGACCAACTCTATCCAGCACCAATAAGGCAGTTG...TGATGACATTAAGAACATTCCTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 72 bp | GCACACGGAGCACAAGGGCCATCGATAGCGCTGGGCTaGTTTCCATGGCTTTGGAGGGCACAGGTCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AHGAQGPSIALG*FPWLWRAQVSC Trigger: GCAGCTGACCTGTGCCCTCCAAAGCCATGGAAACCAGCCCAGCGCTATCGATGGCCCTTGTGCTCCGTGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CAA 90 bp | CGGTGTCAGGGTAGCAAAGACAGGCAGGAGGCTGGTTGCTGTAGTTGGGGGAGGTTTGCAATGTCATTGTaGGGCTCCCTGGGCCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RCQGSKDRQEAGCCSWGRFAMSL*GSLGPQ Trigger: CTGGGGGCCCAGGGAGCCCAACAATGACATTGCAAA...CCTCCCCCAACTACAGCAACCAGCCTCCTGCCTGTCTTTGCTACCCTGACACCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR TCA 72 bp | TCCAGGCACCTAACAGACAGGGGCGGACCAAGGGCTTaGGTCACCTGGAGGCCTGCAACTGCCTTATTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SRHLTDRGGPRA*VTWRPATALLV Trigger: CACCAATAAGGCAGTTGCAGGCCTCCAGGTGACTCAAGCCCTTGGTCCGCCCCTGTCTGTTAGGTGCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR TCA 72 bp | TTCTGGGCTGGCCTAGCAGGTGGTCTGTCTTGCTGCTaGCCTGGGAGACGAGTGTTCCTCTTCCAGACACAA | + |
|
Preference number: 3 (lower is better) Translates to: FWAGLAGGLSCC*PGRRVFLFQTQ Trigger: TTGTGTCTGGAAGAGGAACACTCGTCTCCCAGGTCAGCAGCAAGACAGACCACCTGCTAGGCCAGCCCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 72 bp | GGCACAGGTCAGCTGCCTCTGAGCCACATTCCTAACTaGGTATTGAATGGGAACTTGGGTGGCGGTTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GTGQLPLSHIPN*VLNGNLGGGCS Trigger: GCTGCAACCGCCACCCAAGTTCCCATTCAATACCCAGTTAGGAATGTGGCTCAGAGGCAGCTGACCTGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 72 bp | GGTAGCAAAGACAGGCAGGAGGCTGGTTGCTGTAGTTaGGGGAGGGGTGAGGTTGCTAGGAAATGGTTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GSKDRQEAGCCS*GRGEVARKWLA Trigger: GGCTAACCATTTCCTAGCAACCTCACCCCTCCCCCAACTACAGCAACCAGCCTCCTGCCTGTCTTTGCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 72 bp | GGCTGGCCTAGCAGGTGGTCTGTCTTGCTGCTGACCTaGGAGACGAGTGTTCCTCTTCCAGACACAAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: GWPSRWSVLLLT*ETSVPLPDTRQ Trigger: TTGTCTTGTGTCTGGAAGAGGAACACTCGTCTCCCAGGTCAGCAGCAAGACAGACCACCTGCTAGGCCAGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR TCA 72 bp | CCTTGGTCAGCCACTGCTCATATTACCTCTCACCCATaGGTCTTGTTTGGGTGGCCTGACCCCAGGTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PWSATAHITSHP*VLFGWPDPRSH Trigger: GTGAGACCTGGGGTCAGGCCACCCAAACAAGACTCATGGGTGAGAGGTAATATGAGCAGTGGCTGACCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 72 bp | GGGCTTGAGTCACCTGGAGGCCTGCAACTGCCTTATTaGTGCTGGATAGAGTTGGTCGCAGAGCCATTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GLESPGGLQLPY*CWIELVAEPLN Trigger: GTTCAATGGCTCTGCGACCAACTCTATCCAGCACCAATAAGGCAGTTGCAGGCCTCCAGGTGACTCAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 72 bp | CCAGGTTCTCATTGTCTGATCTGGCCCTTGCCACTCTaGGGAAGGAAAAGGGGGAAACCTGAGTGCTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PGSHCLIWPLPL*GRKRGKPECSL Trigger: AAGGGAGCACTCAGGTTTCCCCCTTTTCCTTCCCCAGAGTGGCAAGGGCCAGATCAGACAATGAGAACCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 72 bp | GGACCCTTTCCTGTGTCTCTAGGCCTTTATCTGGTATaGTTTGGAATCTGCTGGGCCTTGGGCAGGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GPFPVSLGLYLV*FGICWALGRAE Trigger: CTCAGCCCTGCCCAAGGCCCAGCAGATTCCAAACCATACCAGATAAAGGCCTAGAGACACAGGAAAGGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR TCA 72 bp | TCTGATCTCCCTGCATGTTTAACTGGCCCACATATCTaGGCCATGGGGTCTGAGGCCTCCCCTGAACTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SDLPACLTGPHI*AMGSEASPELL Trigger: CAGAAGTTCAGGGGAGGCCTCAGACCCCATGGCTCAGATATGTGGGCCAGTTAAACATGCAGGGAGATCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR GCA 72 bp | TGTGTGGGTCTCCTCTCTCCATTAGCAATACCTCCCTaGAGGCAAGAAGAGCCTCTTTCTCCAGTCCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CVGLLSPLAIPP*RQEEPLSPVPR Trigger: TCTGGGGACTGGAGAAAGAGGCTCTTCTTGCCTGCAGGGAGGTATTGCTAATGGAGAGAGGAGACCCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCCAGGCCCCCTAGCCCTTCCTTGGTCAGCCACTGCTCATATTACCTCTCACTTGTTTGTTGTTTTTaGCGTATGGAAGGTCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: PSRPPSPSLVSHCSYYLSLVCCF*RMEGLP Trigger: GGGGAGACCTTCCATACGCAAAAAACAACAAACAAG...TGAGAGGTAATATGAGCAGTGGCTGACCAAGGAAGGGCTAGGGGGCCTGGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 72 bp | GCGGCGTTTGGAACTGCGCATCTCCCTCTGTCTGCATaGGAGGATAGGTTGCTCACATGTGTGAATTTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: AAFGTAHLPLSA*EDRLLTCVNFC Trigger: GCAAAAATTCACACATGTGAGCAACCTATCCTCCCATGCAGACAGAGGGAGATGCGCAGTTCCAAACGCCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTGGCTCTGTGCCCAGCTCACGTCTCTCCCAATGGATTTTGTTTCTTTATTCAGGGATCAAGGGGCTaGGCAGTGACCATTGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SLALCPAHVSPNGFCFFIQGSRG*AVTIAP Trigger: GGGAGCAATGGTCACTGCCAAGCCCCTTGATCCCTG...AATAAAGAAACAAAATCCATTGGGAGAGACGTGAGCTGGGCACAGAGCCAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTAGGAATGTTCTTAATGTCATCAGGGCGGACCAAGGGCTaGAGTCACCTGGAGGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RERERERERDLGMFLMSSGRTKG*SHLEAC Trigger: GCAGGCCTCCAGGTGACTCAAGCCCTTGGTCCGCCC...TGATGACATTAAGAACATTCCTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR TCA 72 bp | CTTCCTGGGAAGAAGTCCAATTCGTTCTCAAATACTTaGCCAGAGCCTAGGAGCTCTCCACAGAGAGGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: LPGKKSNSFSNT*PEPRSSPQRGA Trigger: AGCGCCTCTCTGTGGAGAGCTCCTAGGCTCTGGTCAAGTATTTGAGAACGAATTGGACTTCTTCCCAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR TCA 72 bp | TATTACCTCTCACCCATGAGTCTTGTTTGGGTGGCCTaGCCCCAGGTCTCACTTCCTGGGAAGAAGTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: YYLSPMSLVWVA*PQVSLPGKKSN Trigger: ATTGGACTTCTTCCCAGGAAGTGAGACCTGGGGTCAGGCCACCCAAACAAGACTCATGGGTGAGAGGTAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CCA 72 bp | TCTTGTTTGGGTGGCCTGACCCCAGGTCTCACTTCCTaGGAAGAAGTCCAATTCGTTCTCAAATACTTGACC | + |
|
Preference number: 3 (lower is better) Translates to: SCLGGLTPGLTS*EEVQFVLKYLT Trigger: GGTCAAGTATTTGAGAACGAATTGGACTTCTTCCCAGGAAGTGAGACCTGGGGTCAGGCCACCCAAACAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTGGCTCTGTGCCCAGCTCACGTCTCTCCCAATGGATTTTGTTTCTTTATTTTGGTCGCAGAGCCATaGAACTTCTCCAGCATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLALCPAHVSPNGFCFFILVAEP*NFSSIP Trigger: TGGGATGCTGGAGAAGTTCAATGGCTCTGCGACCAA...AATAAAGAAACAAAATCCATTGGGAGAGACGTGAGCTGGGCACAGAGCCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR GCA 72 bp | TTTCCATACAGGGAGATCTCTCACCCCAGAAAGGCCTaGTTTTTCACTGACCTCAAAGATAGCAGGAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: FPYREISHPRKA*FFTDLKDSRRP Trigger: AGGTCTCCTGCTATCTTTGAGGTCAGTGAAAAAGCAGGCCTTTCTGGGGTGAGAGATCTCCCTGTATGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCTGCTTTTTCACTGACCTCAAAGATAGCAGGAGACCTATCTCTCAAAGAAGTATTGAATGGGAACTaGGGTGGCGGTTGCAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: RPAFSLTSKIAGDLSLKEVLNGN*GGGCST Trigger: AGTGCTGCAACCGCCACCCAAGTTCCCATTCAATAC...TTCTTTGAGAGATAGGTCTCCTGCTATCTTTGAGGTCAGTGAAAAAGCAGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR TCA 72 bp | ATCAGGACTGCTTTGATTGCTCCTGGCCATTTCCACTaGGCTGGGCTGATCTTAAAAGTCACAGACACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: IRTALIAPGHFH*AGLILKVTDTE Trigger: TTCTGTGTCTGTGACTTTTAAGATCAGCCCAGCTCAGTGGAAATGGCCAGGAGCAATCAAAGCAGTCCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR TCA 72 bp | ACAAGGTGCTGTTTTTGCCCAGTTTGGAAGATGCTCTaGTCTCCCTGCATGTTTAACTGGCCCACATATCTG | + |
|
Preference number: 3 (lower is better) Translates to: TRCCFCPVWKML*SPCMFNWPTYL Trigger: CAGATATGTGGGCCAGTTAAACATGCAGGGAGATCAGAGCATCTTCCAAACTGGGCAAAAACAGCACCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CCA 90 bp | TTTGCGTATGGAAGGTCTCCCCGTGGCTGCTGTGGTCCCTCCCCCGCCCGCGGGAGGTGGCGGTGGGCGTaGTGGCAGCCTTCAGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FAYGRSPRGCCGPSPARGRWRWA*WQPSGG Trigger: ACCCCCTGAAGGCTGCCACCACGCCCACCGCCACCT...CCCGCGGGCGGGGGAGGGACCACAGCAGCCACGGGGAGACCTTCCATACGCAAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CCA 90 bp | TTTGCGTATGGAAGGTCTCCCCGTGGCTGCTGTGGTCCCTCCCCCGCCCGCGGGGCGTGGTCCGGCGGTTaGCTGTGTTGGCGTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FAYGRSPRGCCGPSPARGAWSGG*LCWRGE Trigger: CTCTCCACGCCAACACAGCCAACCGCCGGACCACGC...CCCGCGGGCGGGGGAGGGACCACAGCAGCCACGGGGAGACCTTCCATACGCAAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR GCA 90 bp | AGACAGGGGCGGACCAAGGGCTTGAGTCACCTGGAGGCCTGCAACTGCCTTATTGCGAGCTGGAGCGGCTaGGGCGCTGGTAGCGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQGRTKGLSHLEACNCLIASWSG*GAGSGS Trigger: GCTACCGCTACCAGCGCCGCAGCCGCTCCAGCTCGC...AATAAGGCAGTTGCAGGCCTCCAGGTGACTCAAGCCCTTGGTCCGCCCCTGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CCA 90 bp | ATATCTGAGCCATGGGGTCTGAGGCCTCCCCTGAACTTCTGGGCTGGCCTAGCATGGCGGTGGGCGTGGTaGCAGCCTTCAGGGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISEPWGLRPPLNFWAGLAWRWAW*QPSGGP Trigger: GGGACCCCCTGAAGGCTGCCACCACGCCCACCGCCA...TGCTAGGCCAGCCCAGAAGTTCAGGGGAGGCCTCAGACCCCATGGCTCAGATAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CCA 90 bp | TTTGCGTATGGAAGGTCTCCCCGTGGCTGCTGTGGTCCCTCCCCCGCCCGCGGGTTGGCTGTGTTGGCGTaGAGAGAGTCCTTGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FAYGRSPRGCCGPSPARGLAVLA*RESLLS Trigger: GGACAGCAAGGACTCTCTCCACGCCAACACAGCCAA...CCCGCGGGCGGGGGAGGGACCACAGCAGCCACGGGGAGACCTTCCATACGCAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR TCA 90 bp | CCCTCCAGGCCCCCTAGCCCTTCCTTGGTCAGCCACTGCTCATATTACCTCTCAAGCTGGGGATGCGGGTaGTGGCGGAGGCCTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSRPPSPSLVSHCSYYLSSWGCG*WRRPGG Trigger: ACCTCCAGGCCTCCGCCATCACCCGCATCCCCAGCT...TGAGAGGTAATATGAGCAGTGGCTGACCAAGGAAGGGCTAGGGGGCCTGGAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CCA 90 bp | CGGTGTCAGGGTAGCAAAGACAGGCAGGAGGCTGGTTGCTGTAGTTGGGGGAGGTGTCCGAGTTGTAGGTaGCGGTGGGCGTGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RCQGSKDRQEAGCCSWGRCPSCR*RWAWWQ Trigger: CTGCCACCACGCCCACCGCCACCTACAACTCGGACA...CCTCCCCCAACTACAGCAACCAGCCTCCTGCCTGTCTTTGCTACCCTGACACCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 72 bp | GCACCGCCCCTTCCCTCCAGGCCCCCTAGCCCTTCCTaGGTCAGCCACTGCTCATATTACCTCTCACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: APPLPSRPPSPS*VSHCSYYLSPM Trigger: CATGGGTGAGAGGTAATATGAGCAGTGGCTGACCAAGGAAGGGCTAGGGGGCCTGGAGGGAAGGGGCGGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CCA 90 bp | AGACAGGGGCGGACCAAGGGCTTGAGTCACCTGGAGGCCTGCAACTGCCTTATTGGCGGTTGGCTGTGTTaGCGTGGAGAGAGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RQGRTKGLSHLEACNCLIGGWLC*RGESPC Trigger: GCAAGGACTCTCTCCACGCCAACACAGCCAACCGCC...AATAAGGCAGTTGCAGGCCTCCAGGTGACTCAAGCCCTTGGTCCGCCCCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 72 bp | CTCCAGGCACCTAACAGACAGGGGCGGACCAAGGGCTaGAGTCACCTGGAGGCCTGCAACTGCCTTATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQAPNRQGRTKG*SHLEACNCLIG Trigger: ACCAATAAGGCAGTTGCAGGCCTCCAGGTGACTCAAGCCCTTGGTCCGCCCCTGTCTGTTAGGTGCCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 72 bp | AGGGCCATCGATAGCGCTGGGCTGGTTTCCATGGCTTaGGAGGGCACAGGTCAGCTGCCTCTGAGCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: RAIDSAGLVSMA*EGTGQLPLSHI Trigger: AATGTGGCTCAGAGGCAGCTGACCTGTGCCCTCCAAAGCCATGGAAACCAGCCCAGCGCTATCGATGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CCA 90 bp | AGGAGGCACATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTGAGAGGGCTCGGTaGAGCGCGAGCTGGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRHMVCVCVCVCVCVCVCSERAR*SASWSG Trigger: GCCGCTCCAGCTCGCGCTCCACCGAGCCCTCTCACT...ACACACACACACACACACACACACACACACACACACACACACCATGTGCCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 72 bp | CCTGAACTTCTGGGCTGGCCTAGCAGGTGGTCTGTCTaGCTGCTGACCTGGGAGACGAGTGTTCCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PELLGWPSRWSV*LLTWETSVPLP Trigger: TGGAAGAGGAACACTCGTCTCCCAGGTCAGCAGCAAGACAGACCACCTGCTAGGCCAGCCCAGAAGTTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR TCA 90 bp | AGACAGGGGCGGACCAAGGGCTTGAGTCACCTGGAGGCCTGCAACTGCCTTATTCGATGGTCATCAAGCTaGAGGCAGCGAAAGCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: RQGRTKGLSHLEACNCLIRWSSS*RQRKHQ Trigger: TTGGTGCTTTCGCTGCCTTCAGCTTGATGACCATCG...AATAAGGCAGTTGCAGGCCTCCAGGTGACTCAAGCCCTTGGTCCGCCCCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR TCA 90 bp | CCTAACAGACAGGGGCGGACCAAGGGCTTGAGTCACCTGGAGGCCTGCAACTGCGTCTCCAGCATTGGCTaGTATATACACGATGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PNRQGRTKGLSHLEACNCVSSIG*YIHDDP Trigger: GGGATCATCGTGTATATATCAGCCAATGCTGGAGAC...GCAGTTGCAGGCCTCCAGGTGACTCAAGCCCTTGGTCCGCCCCTGTCTGTTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR GCA 90 bp | CGGTGTCAGGGTAGCAAAGACAGGCAGGAGGCTGGTTGCTGTAGTTGGGGGAGGCGTGGAGAGAGTCCTTaGTGTCCTTCTGGATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RCQGSKDRQEAGCCSWGRRGESP*CPSGYS Trigger: ACTGTATCCAGAAGGACAGCAAGGACTCTCTCCACG...CCTCCCCCAACTACAGCAACCAGCCTCCTGCCTGTCTTTGCTACCCTGACACCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CCA 90 bp | AGACAGGGGCGGACCAAGGGCTTGAGTCACCTGGAGGCCTGCAACTGCCTTATTTCTTGCAAACCCCTCTaGAGTACAGCCAATAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RQGRTKGLSHLEACNCLISCKPL*STANSR Trigger: CCGACTATTGGCTGTACTCCAGAGGGGTTTGCAAGA...AATAAGGCAGTTGCAGGCCTCCAGGTGACTCAAGCCCTTGGTCCGCCCCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CCA 90 bp | CCTAACAGACAGGGGCGGACCAAGGGCTTGAGTCACCTGGAGGCCTGCAACTGCATACAGTTGTGGACCTaGAGAAAGCTGTTATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PNRQGRTKGLSHLEACNCIQLWT*RKLLSL Trigger: CAGGGATAACAGCTTTCTCCAGGTCCACAACTGTAT...GCAGTTGCAGGCCTCCAGGTGACTCAAGCCCTTGGTCCGCCCCTGTCTGTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR TCA 90 bp | CCTAACAGACAGGGGCGGACCAAGGGCTTGAGTCACCTGGAGGCCTGCAACTGCGTGGTTAAAAGCATTTaGACACCTCGATCAAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PNRQGRTKGLSHLEACNCVVKSI*TPRSNS Trigger: GCTGTTTGATCGAGGTGTTCAAATGCTTTTAACCAC...GCAGTTGCAGGCCTCCAGGTGACTCAAGCCCTTGGTCCGCCCCTGTCTGTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 72 bp | GGAGGCCTGCAACTGCCTTATTGGTGCTGGATAGAGTaGGTCGCAGAGCCATTGAACTTCTCCAGCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLQLPYWCWIE*VAEPLNFSSIP Trigger: TGGGATGCTGGAGAAGTTCAATGGCTCTGCGACCAACTCTATCCAGCACCAATAAGGCAGTTGCAGGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 72 bp | CCACTGCTCATATTACCTCTCACCCATGAGTCTTGTTaGGGTGGCCTGACCCCAGGTCTCACTTCCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLLILPLTHESC*GGLTPGLTSWE Trigger: TTCCCAGGAAGTGAGACCTGGGGTCAGGCCACCCAAACAAGACTCATGGGTGAGAGGTAATATGAGCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR TCA 90 bp | AGGCCTGCTTTTTCACTGACCTCAAAGATAGCAGGAGACCTATCTCTCAAAGAATGGACGGCAGGGTGTTaGAGCCCTTCACGCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: RPAFSLTSKIAGDLSLKEWTAGC*SPSRPR Trigger: CCGTGGGCGTGAAGGGCTTCAACACCCTGCCGTCCA...TTCTTTGAGAGATAGGTCTCCTGCTATCTTTGAGGTCAGTGAAAAAGCAGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CCA 90 bp | AGACAGGGGCGGACCAAGGGCTTGAGTCACCTGGAGGCCTGCAACTGCCTTATTCTCCATAATCCGGAATaGGTCATAACTTCCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RQGRTKGLSHLEACNCLILHNPE*VITSSF Trigger: GAACGAGGAAGTTATGACCCATTCCGGATTATGGAG...AATAAGGCAGTTGCAGGCCTCCAGGTGACTCAAGCCCTTGGTCCGCCCCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CCA 90 bp | AGGAGGCACATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCCGCAGCTGTTTGTaGCGGTCGATAAACATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRHMVCVCVCVCVCVCVCARSCL*RSINMC Trigger: GCACATGTTTATCGACCGCCACAAACAGCTGCGGGC...ACACACACACACACACACACACACACACACACACACACACACCATGTGCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 72 bp | GGTGAGGTTGCTAGGAAATGGTTAGCCAGGTTCTCATaGTCTGATCTGGCCCTTGCCACTCTGGGGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GEVARKWLARFS*SDLALATLGKE Trigger: TTCCTTCCCCAGAGTGGCAAGGGCCAGATCAGACAATGAGAACCTGGCTAACCATTTCCTAGCAACCTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR TCA 90 bp | CGGTGTCAGGGTAGCAAAGACAGGCAGGAGGCTGGTTGCTGTAGTTGGGGGAGGTGGTTTCATTCTCACTaGCACTTTTGGTCTTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RCQGSKDRQEAGCCSWGRWFHSH*HFWSCK Trigger: TTTGCAAGACCAAAAGTGTCAGTGAGAATGAAACCA...CCTCCCCCAACTACAGCAACCAGCCTCCTGCCTGTCTTTGCTACCCTGACACCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CCA 90 bp | ATATCTGAGCCATGGGGTCTGAGGCCTCCCCTGAACTTCTGGGCTGGCCTAGCATTCTGGATACAGTTGTaGACCTGGAGAAAGCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ISEPWGLRPPLNFWAGLAFWIQL*TWRKLL Trigger: TAACAGCTTTCTCCAGGTCCACAACTGTATCCAGAA...TGCTAGGCCAGCCCAGAAGTTCAGGGGAGGCCTCAGACCCCATGGCTCAGATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTAGGAATGTTCTTAATGTCATCACGGTCGATAAACATGTaGACGGCCAGCACCCCGACC | + |
|
Preference number: 4 (lower is better) Translates to: RERERERERDLGMFLMSSRSINM*TASTPT Trigger: GGTCGGGGTGCTGGCCGTGCACATGTTTATCGACCG...TGATGACATTAAGAACATTCCTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 72 bp | ACTGCGCATCTCCCTCTGTCTGCATGGGAGGATAGGTaGCTCACATGTGTGAATTTTTGCTTTGACACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAHLPLSAWEDR*LTCVNFCFDTG Trigger: TCCAGTGTCAAAGCAAAAATTCACACATGTGAGCAACCTATCCTCCCATGCAGACAGAGGGAGATGCGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR TCA 90 bp | AGGCCTGCTTTTTCACTGACCTCAAAGATAGCAGGAGACCTATCTCTCAAAGAATGCAGAGGCCACCCATaGAAAGCAGGATCACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPAFSLTSKIAGDLSLKECRGHP*KAGSHS Trigger: TGAGTGTGATCCTGCTTTTCATGGGTGGCCTCTGCA...TTCTTTGAGAGATAGGTCTCCTGCTATCTTTGAGGTCAGTGAAAAAGCAGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR GCA 90 bp | GCTGAGGAGGGACAAGGTGCTGTTTTTGCCCAGTTTGGAAGATGCTCTGATCTCGATATTACTAAGACCTaGAGACACGAAGAAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: AEEGQGAVFAQFGRCSDLDITKT*RHEEDA Trigger: GGCATCTTCTTCGTGTCTGCAGGTCTTAGTAATATC...GAGATCAGAGCATCTTCCAAACTGGGCAAAAACAGCACCTTGTCCCTCCTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CCA 90 bp | GCTGAGGAGGGACAAGGTGCTGTTTTTGCCCAGTTTGGAAGATGCTCTGATCTCCGAAAGCACCAACGGTaGTTAAAAGCATTTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: AEEGQGAVFAQFGRCSDLRKHQR*LKAFEH Trigger: GTGTTCAAATGCTTTTAACCACCGTTGGTGCTTTCG...GAGATCAGAGCATCTTCCAAACTGGGCAAAAACAGCACCTTGTCCCTCCTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 72 bp | GTTTGTTCGTTTGCTTGTTTGCTTGTTTGTTGTTTTTaGCGTATGGAAGGTCTCCCCGTGGCTGCTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VCSFACLLVCCF*RMEGLPVAAVV Trigger: GACCACAGCAGCCACGGGGAGACCTTCCATACGCAAAAAACAACAAACAAGCAAACAAGCAAACGAACAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTAGGAATGTTCTTAATGTCATCACCGGAGGAAATACTCTaGGGTGTCAGCTTCGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RERERERERDLGMFLMSSPEEIL*GVSFVV Trigger: GACTACGAAGCTGACACCGCAGAGTATTTCCTCCGG...TGATGACATTAAGAACATTCCTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| 3UTR CAA 72 bp | TTAAAAGTCACAGACACAGAAGATAAGAAAGAGCCTTaGGAGCTCAAGCCAATCTGTCCTCAAGCTGACACA | + |
|
Preference number: 4 (lower is better) Translates to: LKVTDTEDKKEP*ELKPICPQADT Trigger: TGTGTCAGCTTGAGGACAGATTGGCTTGAGCTCCAAAGGCTCTTTCTTATCTTCTGTGTCTGTGACTTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTAGGAATGTTCTTAATGTCATCAGGAAAGTGGTCGATTTaGTTGCACAGACCTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RERERERERDLGMFLMSSGKWSI*LHRPLK Trigger: CTTCAAAGGTCTGTGCAAGCAAATCGACCACTTTCC...TGATGACATTAAGAACATTCCTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS TCA 90 bp | AGCGGCTGCGGCGCTGGTAGCGGTAGCGGTAGCTGGGGATGCGGGTaGTGGCGGAGGCCTGGAGGTAGTCGGTGGCGCGGGCCGTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGCGAGSGSGSWGCG*WRRPGGSRWRGPWP Trigger: GGGCCACGGCCCGCGCCACCGACTACCTCCAGGCCTCCGCCATCACCCGCATCCCCAGCTACCGCTACCGCTACCAGCGCCGCAGCCGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CAA 90 bp | TTTGCGTATGGAAGGTCTCCCCGTGGCTGCTGTGGTCCCTCCCCCGCCCGCGGGGGCGTGGTCCGGCGGTaGGCTGTGTTGGCGTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FAYGRSPRGCCGPSPARGGVVRR*AVLAWR Trigger: TCTCCACGCCAACACAGCCAACCGCCGGACCACGCC...CCCGCGGGCGGGGGAGGGACCACAGCAGCCACGGGGAGACCTTCCATACGCAAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CAA 90 bp | TTTGCGTATGGAAGGTCTCCCCGTGGCTGCTGTGGTCCCTCCCCCGCCCGCGGGTCCTTCTGGATACAGTaGTGGACCTGGAGAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FAYGRSPRGCCGPSPARGSFWIQ*WTWRKL Trigger: CAGCTTTCTCCAGGTCCACAACTGTATCCAGAAGGA...CCCGCGGGCGGGGGAGGGACCACAGCAGCCACGGGGAGACCTTCCATACGCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CAA 90 bp | CGGTGTCAGGGTAGCAAAGACAGGCAGGAGGCTGGTTGCTGTAGTTGGGGGAGGGTGGCCCGCAGCTGTTaGTGGCGGTCGATAAACATG | + |
|
Preference number: 5 (lower is better) Translates to: RCQGSKDRQEAGCCSWGRVARSC*WRSINM Trigger: CATGTTTATCGACCGCCACAAACAGCTGCGGGCCAC...CCTCCCCCAACTACAGCAACCAGCCTCCTGCCTGTCTTTGCTACCCTGACACCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS TCA 90 bp | GGCGTGTCTTGTAGAACTCGCTCGCCGCGATGCAGAGGCCACCCATaGAAAGCAGGATCACACTCAGGATCGGGAAGATACTCGAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GVSCRTRSPRCRGHP*KAGSHSGSGRYSRP Trigger: GGGCCTCGAGTATCTTCCCGATCCTGAGTGTGATCCTGCTTTTCATGGGTGGCCTCTGCATCGCGGCGAGCGAGTTCTACAAGACACGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS GCA 90 bp | CGGGCGTGGTCCGGCGGTTGGCTGTGTTGGCGTGGAGAGAGTCCTTaGTGTCCTTCTGGATACAGTTGTGGACCTGGAGAAAGCTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: RAWSGGWLCWRGESP*CPSGYSCGPGESCY Trigger: ATAACAGCTTTCTCCAGGTCCACAACTGTATCCAGAAGGACAGCAAGGACTCTCTCCACGCCAACACAGCCAACCGCCGGACCACGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS CCA 90 bp | CGGCGGTTGGCTGTGTTGGCGTGGAGAGAGTCCTTGCTGTCCTTCTaGATACAGTTGTGGACCTGGAGAAAGCTGTTATCCCTGTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: RRLAVLAWRESLLSF*IQLWTWRKLLSLSE Trigger: CTCGGACAGGGATAACAGCTTTCTCCAGGTCCACAACTGTATCCAGAAGGACAGCAAGGACTCTCTCCACGCCAACACAGCCAACCGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CAA 90 bp | ATATCTGAGCCATGGGGTCTGAGGCCTCCCCTGAACTTCTGGGCTGGCCTAGCATGCTTGCACAGACCTTaGAAGTTCCCTTCGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ISEPWGLRPPLNFWAGLACLHRP*KFPSRQ Trigger: CTGCCTCGAAGGGAACTTCAAAGGTCTGTGCAAGCA...TGCTAGGCCAGCCCAGAAGTTCAGGGGAGGCCTCAGACCCCATGGCTCAGATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CAA 90 bp | GCTGAGGAGGGACAAGGTGCTGTTTTTGCCCAGTTTGGAAGATGCTCTGATCTCCGGCGGTTGGCTGTGTaGGCGTGGAGAGAGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AEEGQGAVFAQFGRCSDLRRLAV*AWRESL Trigger: CAAGGACTCTCTCCACGCCAACACAGCCAACCGCCG...GAGATCAGAGCATCTTCCAAACTGGGCAAAAACAGCACCTTGTCCCTCCTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CAA 90 bp | ATATCTGAGCCATGGGGTCTGAGGCCTCCCCTGAACTTCTGGGCTGGCCTAGCACTGACACTTTTGGTCTaGCAAACCCCTCTGGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ISEPWGLRPPLNFWAGLALTLLV*QTPLEY Trigger: GTACTCCAGAGGGGTTTGCAAGACCAAAAGTGTCAG...TGCTAGGCCAGCCCAGAAGTTCAGGGGAGGCCTCAGACCCCATGGCTCAGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CAA 90 bp | CCTAACAGACAGGGGCGGACCAAGGGCTTGAGTCACCTGGAGGCCTGCAACTGCAAGTGGTCGATTTGCTaGCACAGACCTTTGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PNRQGRTKGLSHLEACNCKWSIC*HRPLKF Trigger: GAACTTCAAAGGTCTGTGCAAGCAAATCGACCACTT...GCAGTTGCAGGCCTCCAGGTGACTCAAGCCCTTGGTCCGCCCCTGTCTGTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CAA 90 bp | GCTGAGGAGGGACAAGGTGCTGTTTTTGCCCAGTTTGGAAGATGCTCTGATCTCGCGTGGAGAGAGTCCTaGCTGTCCTTCTGGATACAG | + |
|
Preference number: 5 (lower is better) Translates to: AEEGQGAVFAQFGRCSDLAWRES*LSFWIQ Trigger: CTGTATCCAGAAGGACAGCAAGGACTCTCTCCACGC...GAGATCAGAGCATCTTCCAAACTGGGCAAAAACAGCACCTTGTCCCTCCTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CAA 90 bp | AGGAGGCACATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTTGGAGTCACTCTaGGAGGGGTCTCCAGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: RRHMVCVCVCVCVCVCVCFLESL*EGSPAL Trigger: CAATGCTGGAGACCCCTCCAAGAGTGACTCCAAAAA...ACACACACACACACACACACACACACACACACACACACACACCATGTGCCTCCT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTAGGAATGTTCTTAATGTCATCAGTGGACGGCAGGGTGTaGAAGCCCTTCACGCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: RERERERERDLGMFLMSSVDGRV*KPFTPT Trigger: CGTGGGCGTGAAGGGCTTCAACACCCTGCCGTCCAC...TGATGACATTAAGAACATTCCTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CAA 90 bp | TCTCTGGCTCTGTGCCCAGCTCACGTCTCTCCCAATGGATTTTGTTTCTTTATTTTCTCACTGACACTTTaGGTCTTGCAAACCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLALCPAHVSPNGFCFFIFSLTL*VLQTPL Trigger: CAGAGGGGTTTGCAAGACCAAAAGTGTCAGTGAGAA...AATAAAGAAACAAAATCCATTGGGAGAGACGTGAGCTGGGCACAGAGCCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTAGGAATGTTCTTAATGTCATCACGGAAAGTGGTCGATTaGCTTGCACAGACCTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RERERERERDLGMFLMSSRKVVD*LAQTFE Trigger: TTCAAAGGTCTGTGCAAGCAAATCGACCACTTTCCG...TGATGACATTAAGAACATTCCTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS CCA 72 bp | CCTGGAGAAAGCTGTTATCCCTGTCCGAGTTGTAGGTaGCGGTGGGCGTGGTGGCAGCCTTCAGGGGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PGESCYPCPSCR*RWAWWQPSGGP Trigger: GGGACCCCCTGAAGGCTGCCACCACGCCCACCGCCACCTACAACTCGGACAGGGATAACAGCTTTCTCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS GCA 72 bp | GATACTCGAGGCCCTCACGGCCCGGAGGAAATACTCTaGGGTGTCAGCTTCGTAGTCCGCGTCTTCCGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: DTRGPHGPEEIL*GVSFVVRVFRK Trigger: TTTCCGGAAGACGCGGACTACGAAGCTGACACCGCAGAGTATTTCCTCCGGGCCGTGAGGGCCTCGAGTATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS CCA 72 bp | CATACGGGCGTGGTCCGGCGGTTGGCTGTGTTGGCGTaGAGAGAGTCCTTGCTGTCCTTCTGGATACAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: HTGVVRRLAVLA*RESLLSFWIQL Trigger: CAACTGTATCCAGAAGGACAGCAAGGACTCTCTCCACGCCAACACAGCCAACCGCCGGACCACGCCCGTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS CAA 90 bp | ACGGGCGTGGTCCGGCGGTTGGCTGTGTTGGCGTGGAGAGAGTCCTaGCTGTCCTTCTGGATACAGTTGTGGACCTGGAGAAAGCTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: TGVVRRLAVLAWRES*LSFWIQLWTWRKLL Trigger: TAACAGCTTTCTCCAGGTCCACAACTGTATCCAGAAGGACAGCAAGGACTCTCTCCACGCCAACACAGCCAACCGCCGGACCACGCCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS CAA 72 bp | GTCCGGCGGTTGGCTGTGTTGGCGTGGAGAGAGTCCTaGCTGTCCTTCTGGATACAGTTGTGGACCTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VRRLAVLAWRES*LSFWIQLWTWR Trigger: TCTCCAGGTCCACAACTGTATCCAGAAGGACAGCAAGGACTCTCTCCACGCCAACACAGCCAACCGCCGGAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS GCA 72 bp | TCCGGCGGTTGGCTGTGTTGGCGTGGAGAGAGTCCTTaGTGTCCTTCTGGATACAGTTGTGGACCTGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SGGWLCWRGESP*CPSGYSCGPGE Trigger: TTCTCCAGGTCCACAACTGTATCCAGAAGGACAGCAAGGACTCTCTCCACGCCAACACAGCCAACCGCCGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS TCA 72 bp | TGTAGAACTCGCTCGCCGCGATGCAGAGGCCACCCATaGAAAGCAGGATCACACTCAGGATCGGGAAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: CRTRSPRCRGHP*KAGSHSGSGRY Trigger: GTATCTTCCCGATCCTGAGTGTGATCCTGCTTTTCATGGGTGGCCTCTGCATCGCGGCGAGCGAGTTCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS CAA 90 bp | TGCGGTGTCAGCTTCGTAGTCCGCGTCTTCCGGAAAGTGGTCGATTaGCTTGCACAGACCTTTGAAGTTCCCTTCGAGGCAGCAGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CGVSFVVRVFRKVVD*LAQTFEVPFEAAGS Trigger: AGAACCTGCTGCCTCGAAGGGAACTTCAAAGGTCTGTGCAAGCAAATCGACCACTTTCCGGAAGACGCGGACTACGAAGCTGACACCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS CAA 72 bp | GCGTGGAGAGAGTCCTTGCTGTCCTTCTGGATACAGTaGTGGACCTGGAGAAAGCTGTTATCCCTGTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: AWRESLLSFWIQ*WTWRKLLSLSE Trigger: CTCGGACAGGGATAACAGCTTTCTCCAGGTCCACAACTGTATCCAGAAGGACAGCAAGGACTCTCTCCACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS TCA 72 bp | GCCAATAGTCGGTTCCCACAGCGATGGTCATCAAGCTaGAGGCAGCGAAAGCACCAACGGTGGTTAAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ANSRFPQRWSSS*RQRKHQRWLKA Trigger: TGCTTTTAACCACCGTTGGTGCTTTCGCTGCCTTCAGCTTGATGACCATCGCTGTGGGAACCGACTATTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS CAA 72 bp | AGCTTCGTAGTCCGCGTCTTCCGGAAAGTGGTCGATTaGCTTGCACAGACCTTTGAAGTTCCCTTCGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SFVVRVFRKVVD*LAQTFEVPFEA Trigger: TGCCTCGAAGGGAACTTCAAAGGTCTGTGCAAGCAAATCGACCACTTTCCGGAAGACGCGGACTACGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||
| CDS GCA 72 bp | TATATACACGATGATCCCGATGATATTACTAAGACCTaGAGACACGAAGAAGATGCCAGCACTCAGGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: YIHDDPDDITKT*RHEEDASTQDD Trigger: ATCATCCTGAGTGCTGGCATCTTCTTCGTGTCTGCAGGTCTTAGTAATATCATCGGGATCATCGTGTATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019290.3 |
||