Pregenerated sensors for CACNB4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017412Ensembl transcript IDs: ENSMUST00000078324.7, ENSMUST00000102760.10, ENSMUST00000102761.9, ENSMUST00000178799.8
Found 368 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CAAAGTCAGAGACTGGCTGGACTGAGGGATAGATCCTCAGCTGGCTaGGCTGCTAAGCCGTGTCAGGGTGCAGCAGGAAGGACAGCTTCC | + |
Preference number: 1 (lower is better) Translates to: QSQRLAGLRDRSSAG*AAKPCQGAAGRTAS Trigger: GGAAGCTGTCCTTCCTGCTGCACCCTGACACGGCTTAGCAGCTCAGCCAGCTGAGGATCTATCCCTCAGTCCAGCCAGTCTCTGACTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CCA 90 bp | ACAGCTTCCCATCCAGAGCCAATCACAGCAGTATCCCGGGAGCTCTaGCCACATCTCTGCTGGCTGACTGCAGAGCTCCAGATGTGTGTA | + |
Preference number: 1 (lower is better) Translates to: TASHPEPITAVSREL*PHLCWLTAELQMCV Trigger: TACACACATCTGGAGCTCTGCAGTCAGCCAGCAGAGATGTGGCCAGAGCTCCCGGGATACTGCTGTGATTGGCTCTGGATGGGAAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR GCA 90 bp | CACAGCAGTATCCCGGGAGCTCTGGCCACATCTCTGCTGGCTGACTaGAGAGCTCCAGATGTGTGTAGTTGTATGCAGACCGACTACAGA | + |
Preference number: 1 (lower is better) Translates to: HSSIPGALATSLLAD*RAPDVCSCMQTDYR Trigger: TCTGTAGTCGGTCTGCATACAACTACACACATCTGGAGCTCTGCAGTCAGCCAGCAGAGATGTGGCCAGAGCTCCCGGGATACTGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR GCA 90 bp | CCAGAGCCAATCACAGCAGTATCCCGGGAGCTCTGGCCACATCTCTaGTGGCTGACTGCAGAGCTCCAGATGTGTGTAGTTGTATGCAGA | + |
Preference number: 1 (lower is better) Translates to: PEPITAVSRELWPHL*WLTAELQMCVVVCR Trigger: TCTGCATACAACTACACACATCTGGAGCTCTGCAGTCAGCCAGCAGAGATGTGGCCAGAGCTCCCGGGATACTGCTGTGATTGGCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR TCA 90 bp | AGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTaGGGGATAGATCCTCAGCTGGCTGAGCTGCTAAGCCGTGTCAGG | + |
Preference number: 1 (lower is better) Translates to: RAKTFILSKVRDWLD*GIDPQLAELLSRVR Trigger: CCTGACACGGCTTAGCAGCTCAGCCAGCTGAGGATCTATCCCTCAGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR GCA 90 bp | CATCTCTGCTGGCTGACTGCAGAGCTCCAGATGTGTGTAGTTGTATaGAGACCGACTACAGAAGAAACAACACCTCGTTCTCCATTCCCC | + |
Preference number: 1 (lower is better) Translates to: HLCWLTAELQMCVVV*RPTTEETTPRSPFP Trigger: GGGGAATGGAGAACGAGGTGTTGTTTCTTCTGTAGTCGGTCTGCATACAACTACACACATCTGGAGCTCTGCAGTCAGCCAGCAGAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CCA 90 bp | GGTGCAATTACATGGGAGTTGCATACAATGCAGATCCTTACCCAGTaGCCACAGCATGCCCTTAGTACCCCTAGAAGTCAAGGATCAACC | + |
Preference number: 1 (lower is better) Translates to: GAITWELHTMQILTQ*PQHALSTPRSQGST Trigger: GGTTGATCCTTGACTTCTAGGGGTACTAAGGGCATGCTGTGGCCACTGGGTAAGGATCTGCATTGTATGCAACTCCCATGTAATTGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR GCA 90 bp | TGGGAAAAACATAAACTTTCGAACATCCAAAGGCCAGAGGAGCCCTaGGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGAAGAAAC | + |
Preference number: 1 (lower is better) Translates to: WEKHKLSNIQRPEEP*ELTSCAICYQRRRN Trigger: GTTTCTTCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCTTTGGATGTTCGAAAGTTTATGTTTTTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR GCA 90 bp | GTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTAGTATaGAGGCAGGGCAAGAAAGGCCCCTGCGTAAACACAGATCGAGCT | + |
Preference number: 1 (lower is better) Translates to: VYGIHTDFHEVYVVV*RQGKKGPCVNTDRA Trigger: AGCTCGATCTGTGTTTACGCAGGGGCCTTTCTTGCCCTGCCTGCATACTACTACATACACTTCATGGAAATCAGTGTGGATTCCATACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR TCA 90 bp | GCCCACCCACACAGCAGATACTGTGCTGTGCTTGCCAAATTAAGATaGCTGGTTAATAGCAGTACTATGGCAAATTGTCAACAGATGATG | + |
Preference number: 1 (lower is better) Translates to: AHPHSRYCAVLAKLR*LVNSSTMANCQQMM Trigger: CATCATCTGTTGACAATTTGCCATAGTACTGCTATTAACCAGTCATCTTAATTTGGCAAGCACAGCACAGTATCTGCTGTGTGGGTGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR TCA 90 bp | GCTCTGTTAAATGTCTTAACAGAAAATTCTGTACGCCTCGATGGATaGCACTCGGGCTTCACAAGCCTGTATCAGATGGTAGCTTGTCAA | + |
Preference number: 1 (lower is better) Translates to: ALLNVLTENSVRLDG*HSGFTSLYQMVACQ Trigger: TTGACAAGCTACCATCTGATACAGGCTTGTGAAGCCCGAGTGTCATCCATCGAGGCGTACAGAATTTTCTGTTAAGACATTTAACAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR TCA 90 bp | GCTTTGCTTTGTTCCCTAGGATGGCTTCTTGTTAAACTCACGCCATaGGAAGCTGTGGATCGATTTCAAGAAAACCTAGCTGACGTTGAA | + |
Preference number: 1 (lower is better) Translates to: ALLCSLGWLLVKLTP*EAVDRFQENLADVE Trigger: TTCAACGTCAGCTAGGTTTTCTTGAAATCGATCCACAGCTTCTCATGGCGTGAGTTTAACAAGAAGCCATCCTAGGGAACAAAGCAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CCA 90 bp | TACAGCTCTGTTAAATGTCTTAACAGAAAATTCTGTACGCCTCGATaGATGACACTCGGGCTTCACAAGCCTGTATCAGATGGTAGCTTG | + |
Preference number: 1 (lower is better) Translates to: YSSVKCLNRKFCTPR*MTLGLHKPVSDGSL Trigger: CAAGCTACCATCTGATACAGGCTTGTGAAGCCCGAGTGTCATCCATCGAGGCGTACAGAATTTTCTGTTAAGACATTTAACAGAGCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR GCA 90 bp | TGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGTaGACTGTCTTTTACCACAGCTCCTTTGTCTTCATTCCCTTTCCA | + |
Preference number: 1 (lower is better) Translates to: CASAFWDMVIESRRV*TVFYHSSFVFIPFP Trigger: TGGAAAGGGAATGAAGACAAAGGAGCTGTGGTAAAAGACAGTGCACACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CCA 90 bp | GACTTCAAGGCATTAGTAGAAAGACACTTTATGTCTAGCTCAAATTaGGTCTTTAGAAAACACATGCATGTGTCATTTCAGAGGCAAGCC | + |
Preference number: 1 (lower is better) Translates to: DFKALVERHFMSSSN*VFRKHMHVSFQRQA Trigger: GGCTTGCCTCTGAAATGACACATGCATGTGTTTTCTAAAGACCCAATTTGAGCTAGACATAAAGTGTCTTTCTACTAATGCCTTGAAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR TCA 90 bp | TCTGAGCCTTTACAAAGAGAGGAGGAATCTTATCTCTTCGTCATTTaGAGGAGAGAAGCTTACAGAAGGAAGATGAAAGATATGCAAAAT | + |
Preference number: 1 (lower is better) Translates to: SEPLQREEESYLFVI*RREAYRRKMKDMQN Trigger: ATTTTGCATATCTTTCATCTTCCTTCTGTAAGCTTCTCTCCTTCAAATGACGAAGAGATAAGATTCCTCCTCTCTTTGTAAAGGCTCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR GCA 90 bp | CCTGATTCTATCATCATTATCATTTCAAAGAAAAGGACTGTTGTTTaGCAGGTAGACACAGCTGGAGTAAGTAACTTAACAGTTACAGTG | + |
Preference number: 1 (lower is better) Translates to: PDSIIIIISKKRTVV*QVDTAGVSNLTVTV Trigger: CACTGTAACTGTTAAGTTACTTACTCCAGCTGTGTCTACCTGGCAAACAACAGTCCTTTTCTTTGAAATGATAATGATGATAGAATCAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGAGTATCCCGGGAGCTCTaGCCACATCTCTGCTGGCTG | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRVSREL*PHLCWL Trigger: CAGCCAGCAGAGATGTGGCCAGAGCTCCCGGGATAC...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGATCCATTCCCCGGAACTaGGCGTGCTTGGGCTTCACT | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRSIPRN*ACLGFT Trigger: AGTGAAGCCCAAGCACGCCCAGTTCCGGGGAATGGA...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCAGTATCCCGGGAGCTCTaGCCACATCTCTGCTGGCTG | + |
Preference number: 2 (lower is better) Translates to: QNSQRFPRIRDALCVWNPVSREL*PHLCWL Trigger: CAGCCAGCAGAGATGTGGCCAGAGCTCCCGGGATAC...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGATCTCTGCTGGCTGACTaGAGAGCTCCAGATGTGTGT | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRSLLAD*RAPDVC Trigger: ACACACATCTGGAGCTCTGCAGTCAGCCAGCAGAGA...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCATGGCCACATCTCTGCTaGCTGACTGCAGAGCTCCAG | + |
Preference number: 2 (lower is better) Translates to: QNSQRFPRIRDALCVWNPWPHLC*LTAELQ Trigger: CTGGAGCTCTGCAGTCAGCCAGCAGAGATGTGGCCA...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGACTCCGTCTTCCAGCATaGCATGGAAGAGCAAAAGAG | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRLRLPA*HGRAKE Trigger: CTCTTTTGCTCTTCCATGTCATGCTGGAAGACGGAG...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGAAAAAGGACTGTTGTTTaGCAGGTAGACACAGCTGGA | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRKRTVV*QVDTAG Trigger: TCCAGCTGTGTCTACCTGGCAAACAACAGTCCTTTT...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTCACATCTCTGCTGGCTaGCTGCAGAGCTCCAGATGT | + |
Preference number: 2 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFHISAG*LQSSRC Trigger: ACATCTGGAGCTCTGCAGTCAGCCAGCAGAGATGTG...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGAATGGCAGATGATGGATaGGTGTTGTGCACAAATTAC | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRMADDG*VLCTNY Trigger: GTAATTTGTGCACAACACTCATCCATCATCTGCCAT...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGACTCTCTCTAATGGCATaGATTAAAACTGCCCTGCTT | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRLSLMA*IKTALL Trigger: AAGCAGGGCAGTTTTAATGCATGCCATTAGAGAGAG...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGAGGTTCCAACTGGAACTaGTCATTTGGAATTTCCTAC | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRGSNWN*SFGISY Trigger: GTAGGAAATTCCAAATGACCAGTTCCAGTTGGAACC...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGATATCTCTTCGTCATTTaGAGGAGAGAAGCTTACAGA | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRYLFVI*RREAYR Trigger: TCTGTAAGCTTCTCTCCTTCAAATGACGAAGAGATA...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGACCTTCCCTTCAAGGATaGAATGATGTAGTGATTTGT | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRPSLQG*NDVVIC Trigger: ACAAATCACTACATCATTTCATCCTTGAAGGGAAGG...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTGTATCCCGGGAGCTCTaGCCACATCTCTGCTGGCTG | + |
Preference number: 2 (lower is better) Translates to: CDVGPRHLFYPKSETGWTVSREL*PHLCWL Trigger: CAGCCAGCAGAGATGTGGCCAGAGCTCCCGGGATAC...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGATGTGCCTCAGCATTTTaGGATATGGTCATTGAAAGT | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRCASAF*DMVIES Trigger: ACTTTCAATGACCATATCCCAAAATGCTGAGGCACA...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCACGCCATGAGAAGCTGTaGATCGATTTCAAGAAAACC | + |
Preference number: 2 (lower is better) Translates to: QNSQRFPRIRDALCVWNPRHEKL*IDFKKT Trigger: GGTTTTCTTGAAATCGATCCACAGCTTCTCATGGCG...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGATTTGGTGCAATTACATaGGAGTTGCATACAATGCAG | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRFGAIT*ELHTMQ Trigger: CTGCATTGTATGCAACTCCCATGTAATTGCACCAAA...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGATTGTCAACTTCAAACTaGCTAACAGTACTGACTGAA | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRLSTSN*LTVLTE Trigger: TTCAGTCAGTACTGTTAGTCAGTTTGAAGTTGACAA...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTCTCCGTCTTCCAGCATaGCATGGAAGAGCAAAAGAG | + |
Preference number: 2 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFLRLPA*HGRAKE Trigger: CTCTTTTGCTCTTCCATGTCATGCTGGAAGACGGAG...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCAATGGCAGATGATGGATaGGTGTTGTGCACAAATTAC | + |
Preference number: 2 (lower is better) Translates to: QNSQRFPRIRDALCVWNPMADDG*VLCTNY Trigger: GTAATTTGTGCACAACACTCATCCATCATCTGCCAT...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGCTCTGGCCACATCTCTaGTGGCTGACTGCAGAGCTC | + |
Preference number: 2 (lower is better) Translates to: LTHCASAFWDMVIESRRVLWPHL*WLTAEL Trigger: GAGCTCTGCAGTCAGCCAGCAGAGATGTGGCCAGAG...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCACTCTCTCTAATGGCATaGATTAAAACTGCCCTGCTT | + |
Preference number: 2 (lower is better) Translates to: QNSQRFPRIRDALCVWNPLSLMA*IKTALL Trigger: AAGCAGGGCAGTTTTAATGCATGCCATTAGAGAGAG...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTTGGCCACATCTCTGCTaGCTGACTGCAGAGCTCCAG | + |
Preference number: 2 (lower is better) Translates to: CDVGPRHLFYPKSETGWTWPHLC*LTAELQ Trigger: CTGGAGCTCTGCAGTCAGCCAGCAGAGATGTGGCCA...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGAAGAGGGCAATTTGTATaGTGGTATTGTGTGTTCTTT | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRRGQFV*WYCVFF Trigger: AAAGAACACACAATACCACCATACAAATTGCCCTCT...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGACAATTGATTTCAACATaGTCTAGTAGACTTTCCAGT | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRQLIST*SSRLSS Trigger: ACTGGAAAGTCTACTAGAGCATGTTGAAATCAATTG...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGACTCTCTGCAATTAAATaGTTTAATGCGCACAAACAA | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRLSAIK*FNAHKQ Trigger: TTGTTTGTGCGCATTAAAGCATTTAATTGCAGAGAG...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGAGAAAATATACTAGCTTaGAAATCAAGGTTGCCTAGA | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRENILA*KSRLPR Trigger: TCTAGGCAACCTTGATTTGCAAGCTAGTATATTTTC...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCAAGAGTAATTTCTGAATaGTGTAGCTGTCTGCCCATA | + |
Preference number: 2 (lower is better) Translates to: QNSQRFPRIRDALCVWNPRVISE*CSCLPI Trigger: TATGGGCAGACAGCTACAGCATTCAGAAATTACTCT...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGAATGTCTAGCTCAAATTaGGTCTTTAGAAAACACATG | + |
Preference number: 2 (lower is better) Translates to: RPEEPCELTSCAICYQRRMSSSN*VFRKHM Trigger: CATGTGTTTTCTAAAGACCCAATTTGAGCTAGACAT...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCAGAAGCAAAGTACTTGTaGAATAGGCATTTCCTAGAG | + |
Preference number: 2 (lower is better) Translates to: QNSQRFPRIRDALCVWNPEAKYL*NRHFLE Trigger: CTCTAGGAAATGCCTATTCCACAAGTACTTTGCTTC...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCATGTGCCTCAGCATTTTaGGATATGGTCATTGAAAGT | + |
Preference number: 2 (lower is better) Translates to: QNSQRFPRIRDALCVWNPCASAF*DMVIES Trigger: ACTTTCAATGACCATATCCCAAAATGCTGAGGCACA...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCATTTGGTGCAATTACATaGGAGTTGCATACAATGCAG | + |
Preference number: 2 (lower is better) Translates to: QNSQRFPRIRDALCVWNPFGAIT*ELHTMQ Trigger: CTGCATTGTATGCAACTCCCATGTAATTGCACCAAA...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCAAAGGCAAAAACACTTTaGATACAACAGCTGTATCAG | + |
Preference number: 2 (lower is better) Translates to: QNSQRFPRIRDALCVWNPKAKTL*IQQLYQ Trigger: CTGATACAGCTGTTGTATTCAAAGTGTTTTTGCCTT...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCATCTTTAGAAAACACATaGATGTGTCATTTCAGAGGC | + |
Preference number: 2 (lower is better) Translates to: QNSQRFPRIRDALCVWNPSLENT*MCHFRG Trigger: GCCTCTGAAATGACACATGCATGTGTTTTCTAAAGA...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCACAATTACATGGGAGTTaGATACAATGCAGATCCTTA | + |
Preference number: 2 (lower is better) Translates to: QNSQRFPRIRDALCVWNPQLHGS*IQCRSL Trigger: TAAGGATCTGCATTGTATGCAACTCCCATGTAATTG...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCTGGAACTGGTCATTTaGAATTTCCTACACGGGAAA | + |
Preference number: 2 (lower is better) Translates to: IPRNWACLGFTLLLSNIPLELVI*NFLHGK Trigger: TTTCCCGTGTAGGAAATTCCAAATGACCAGTTCCAG...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTGAAAGTAGAAGAGTGTaGACTGTCTTTTACCACAGC | + |
Preference number: 2 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFESRRV*TVFYHS Trigger: GCTGTGGTAAAAGACAGTGCACACTCTTCTACTTTC...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTTTCACTGACACACTGTaGCTCAGCATTTTGGGATAT | + |
Preference number: 2 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFFTDTL*LSILGY Trigger: ATATCCCAAAATGCTGAGGCACAGTGTGTCAGTGAA...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTCTGGAACTGGTCATTTaGAATTTCCTACACGGGAAA | + |
Preference number: 2 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFLELVI*NFLHGK Trigger: TTTCCCGTGTAGGAAATTCCAAATGACCAGTTCCAG...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACAGTATCCCGGGAGCTCTaGCCACATCTCTGCTGGCTG | + |
Preference number: 2 (lower is better) Translates to: LNLYTQVHSLQLNALMRTVSREL*PHLCWL Trigger: CAGCCAGCAGAGATGTGGCCAGAGCTCCCGGGATAC...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CAA 90 bp | TCTTTAAAGCCACTAAGCGGAGGGAGAACAAAGCATGCAGTACATTaGCATAGTGTATTTTCCCCAGCATGCCTTGTAGAACGCTACGCA | + |
Preference number: 2 (lower is better) Translates to: SLKPLSGGRTKHAVH*HSVFSPACLVERYA Trigger: TGCGTAGCGTTCTACAAGGCATGCTGGGGAAAATACACTATGCAAATGTACTGCATGCTTTGTTCTCCCTCCGCTTAGTGGCTTTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTACTAACAGTACTGACTaGACAGAAGGCAAAAACACT | + |
Preference number: 2 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFTNSTD*TEGKNT Trigger: AGTGTTTTTGCCTTCTGTTCAGTCAGTACTGTTAGT...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAATCCATTCCCCGGAACTaGGCGTGCTTGGGCTTCACT | + |
Preference number: 2 (lower is better) Translates to: KAEQQSILNLYTQVHSLQSIPRN*ACLGFT Trigger: AGTGAAGCCCAAGCACGCCCAGTTCCGGGGAATGGA...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACACACATCTCTGCTGGCTaGCTGCAGAGCTCCAGATGT | + |
Preference number: 2 (lower is better) Translates to: LNLYTQVHSLQLNALMRTHISAG*LQSSRC Trigger: ACATCTGGAGCTCTGCAGTCAGCCAGCAGAGATGTG...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTTCTTTAGAAAACACATaGATGTGTCATTTCAGAGGC | + |
Preference number: 2 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFSLENT*MCHFRG Trigger: GCCTCTGAAATGACACATGCATGTGTTTTCTAAAGA...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTCAATTGATTTCAACATaGTCTAGTAGACTTTCCAGT | + |
Preference number: 2 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFQLIST*SSRLSS Trigger: ACTGGAAAGTCTACTAGAGCATGTTGAAATCAATTG...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTATTCACTGACACACTGTaGCTCAGCATTTTGGGATAT | + |
Preference number: 2 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVFTDTL*LSILGY Trigger: ATATCCCAAAATGCTGAGGCACAGTGTGTCAGTGAA...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTGAAAATATACTAGCTTaGAAATCAAGGTTGCCTAGA | + |
Preference number: 2 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFENILA*KSRLPR Trigger: TCTAGGCAACCTTGATTTGCAAGCTAGTATATTTTC...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTACTGGAACTGGTCATTTaGAATTTCCTACACGGGAAA | + |
Preference number: 2 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVLELVI*NFLHGK Trigger: TTTCCCGTGTAGGAAATTCCAAATGACCAGTTCCAG...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTATGTCTAGCTCAAATTaGGTCTTTAGAAAACACATG | + |
Preference number: 2 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFMSSSN*VFRKHM Trigger: CATGTGTTTTCTAAAGACCCAATTTGAGCTAGACAT...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CAA 90 bp | AAATTTCAGGCAGCCTCATTATCAGATAAGCAGGTTCATAACGGGTaGCACATACAGTCAAGACAGTGGTTTGGTGGGATTCAAGATATG | + |
Preference number: 2 (lower is better) Translates to: KFQAASLSDKQVHNG*HIQSRQWFGGIQDM Trigger: CATATCTTGAATCCCACCAAACCACTGTCTTGACTGTATGTGCAACCCGTTATGAACCTGCTTATCTGATAATGAGGCTGCCTGAAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CAA 90 bp | TCATTGAAAGTAGAAGAGTGTGCACTGTCTTTTACCACAGCTCCTTaGTCTTCATTCCCTTTCCACGCCCCCATTCTCTACTATGAAATT | + |
Preference number: 2 (lower is better) Translates to: SLKVEECALSFTTAP*SSFPFHAPILYYEI Trigger: AATTTCATAGTAGAGAATGGGGGCGTGGAAAGGGAATGAAGACAAAGGAGCTGTGGTAAAAGACAGTGCACACTCTTCTACTTTCAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTACTAACAGTACTGACTaGACAGAAGGCAAAAACACT | + |
Preference number: 2 (lower is better) Translates to: CDVGPRHLFYPKSETGWTTNSTD*TEGKNT Trigger: AGTGTTTTTGCCTTCTGTTCAGTCAGTACTGTTAGT...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTATATCTCTTCGTCATTTaGAGGAGAGAAGCTTACAGA | + |
Preference number: 2 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVYLFVI*RREAYR Trigger: TCTGTAAGCTTCTCTCCTTCAAATGACGAAGAGATA...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTACCTTCCCTTCAAGGATaGAATGATGTAGTGATTTGT | + |
Preference number: 2 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVPSLQG*NDVVIC Trigger: ACAAATCACTACATCATTTCATCCTTGAAGGGAAGG...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTAAGAGTAATTTCTGAATaGTGTAGCTGTCTGCCCATA | + |
Preference number: 2 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVRVISE*CSCLPI Trigger: TATGGGCAGACAGCTACAGCATTCAGAAATTACTCT...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGATACAGTCAAGACAGTaGTTTGGTGGGATTCAAGAT | + |
Preference number: 2 (lower is better) Translates to: LTHCASAFWDMVIESRRVIQSRQ*FGGIQD Trigger: ATCTTGAATCCCACCAAACCACTGTCTTGACTGTAT...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CCA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGGAAGCAAAGTACTTGTaGAATAGGCATTTCCTAGAG | + |
Preference number: 2 (lower is better) Translates to: LTHCASAFWDMVIESRRVEAKYL*NRHFLE Trigger: CTCTAGGAAATGCCTATTCCACAAGTACTTTGCTTC...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTAAAGGCAAAAACACTTTaGATACAACAGCTGTATCAG | + |
Preference number: 2 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVKAKTL*IQQLYQ Trigger: CTGATACAGCTGTTGTATTCAAAGTGTTTTTGCCTT...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTAAGGCAAAAACACTTTaGATACAACAGCTGTATCAG | + |
Preference number: 2 (lower is better) Translates to: CDVGPRHLFYPKSETGWTKAKTL*IQQLYQ Trigger: CTGATACAGCTGTTGTATTCAAAGTGTTTTTGCCTT...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR TCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTTTGTCAACTTCAAACTaGCTAACAGTACTGACTGAA | + |
Preference number: 2 (lower is better) Translates to: CDVGPRHLFYPKSETGWTLSTSN*LTVLTE Trigger: TTCAGTCAGTACTGTTAGTCAGTTTGAAGTTGACAA...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTACAATTACATGGGAGTTaGATACAATGCAGATCCTTA | + |
Preference number: 2 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVQLHGS*IQCRSL Trigger: TAAGGATCTGCATTGTATGCAACTCCCATGTAATTG...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR GCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTACTCTCTGCAATTAAATaGTTTAATGCGCACAAACAA | + |
Preference number: 2 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVLSAIK*FNAHKQ Trigger: TTGTTTGTGCGCATTAAAGCATTTAATTGCAGAGAG...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
||
3UTR-3UTR GCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTAAGACAAGTTCAAGTATaGAGGTATGAAAAGACGTTA | + |
Preference number: 2 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVRQVQV*RYEKTL Trigger: TAACGTCTTTTCATACCTGCATACTTGAACTTGTCT...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
||
3UTR-3UTR CCA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGATGTCTAGCTCAAATTaGGTCTTTAGAAAACACATG | + |
Preference number: 2 (lower is better) Translates to: LTHCASAFWDMVIESRRVMSSSN*VFRKHM Trigger: CATGTGTTTTCTAAAGACCCAATTTGAGCTAGACAT...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
||
3UTR CAA 90 bp | TTTCCAGTCAATTCACCCAAATTCCAACAGGAATTGGTTTATAAATaGGTTCCAACTGGAACTGGTCATTTGGAATTTCCTACACGGGAA | + |
Preference number: 2 (lower is better) Translates to: FPVNSPKFQQELVYK*VPTGTGHLEFPTRE Trigger: TTCCCGTGTAGGAAATTCCAAATGACCAGTTCCAGTTGGAACCAATTTATAAACCAATTCCTGTTGGAATTTGGGTGAATTGACTGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
||
3UTR-3UTR GCA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAACTCTCTCTAATGGCATaGATTAAAACTGCCCTGCTT | + |
Preference number: 2 (lower is better) Translates to: KAEQQSILNLYTQVHSLQLSLMA*IKTALL Trigger: AAGCAGGGCAGTTTTAATGCATGCCATTAGAGAGAG...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
||
3UTR-3UTR CCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACACTGGAACTGGTCATTTaGAATTTCCTACACGGGAAA | + |
Preference number: 2 (lower is better) Translates to: LNLYTQVHSLQLNALMRTLELVI*NFLHGK Trigger: TTTCCCGTGTAGGAAATTCCAAATGACCAGTTCCAG...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
||
3UTR-3UTR CCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACAATACAGTCAAGACAGTaGTTTGGTGGGATTCAAGAT | + |
Preference number: 2 (lower is better) Translates to: LNLYTQVHSLQLNALMRTIQSRQ*FGGIQD Trigger: ATCTTGAATCCCACCAAACCACTGTCTTGACTGTAT...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
||
3UTR-3UTR TCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACATTGTCAACTTCAAACTaGCTAACAGTACTGACTGAA | + |
Preference number: 2 (lower is better) Translates to: LNLYTQVHSLQLNALMRTLSTSN*LTVLTE Trigger: TTCAGTCAGTACTGTTAGTCAGTTTGAAGTTGACAA...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
||
3UTR-3UTR GCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACACAATTGATTTCAACATaGTCTAGTAGACTTTCCAGT | + |
Preference number: 2 (lower is better) Translates to: LNLYTQVHSLQLNALMRTQLIST*SSRLSS Trigger: ACTGGAAAGTCTACTAGAGCATGTTGAAATCAATTG...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
||
3UTR CCA 72 bp | CATCCAGAGCCAATCACAGCAGTATCCCGGGAGCTCTaGCCACATCTCTGCTGGCTGACTGCAGAGCTCCAG | + |
Preference number: 3 (lower is better) Translates to: HPEPITAVSREL*PHLCWLTAELQ Trigger: CTGGAGCTCTGCAGTCAGCCAGCAGAGATGTGGCCAGAGCTCCCGGGATACTGCTGTGATTGGCTCTGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
||
3UTR GCA 72 bp | ATCCCGGGAGCTCTGGCCACATCTCTGCTGGCTGACTaGAGAGCTCCAGATGTGTGTAGTTGTATGCAGACC | + |
Preference number: 3 (lower is better) Translates to: IPGALATSLLAD*RAPDVCSCMQT Trigger: GGTCTGCATACAACTACACACATCTGGAGCTCTGCAGTCAGCCAGCAGAGATGTGGCCAGAGCTCCCGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
||
3UTR-3UTR CAA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCACGGAACTGGGCGTGCTaGGGCTTCACTTTACTACTC | + |
Preference number: 3 (lower is better) Translates to: QNSQRFPRIRDALCVWNPRNWAC*GFTLLL Trigger: GAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
||
3UTR GCA 72 bp | CCAAAGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTaGCATCTGTTACCAAAGGAGAAGAAACAGGAACAG | + |
Preference number: 3 (lower is better) Translates to: PKARGALRAHQL*HLLPKEKKQEQ Trigger: CTGTTCCTGTTTCTTCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGAAGTGACCCCTCAAAGTaGAAAGGAAAGGTAGCCTTG | + |
Preference number: 3 (lower is better) Translates to: RPEEPCELTSCAICYQRRSDPSK*KGKVAL Trigger: CAAGGCTACCTTTCCTTTCAACTTTGAGGGGTCACT...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
||
3UTR CCA 72 bp | ACACCTCGTTCTCCATTCCCCGGAACTGGGCGTGCTTaGGCTTCACTTTACTACTCTCAAATATCCCCCGGA | + |
Preference number: 3 (lower is better) Translates to: TPRSPFPGTGRA*ASLYYSQISPG Trigger: TCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAATGGAGAACGAGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CCA 72 bp | TCTGAACACTTCCAACCCCGCACACGGCTGGCAGAATaGACACTCTCACCAGGACTTTCCCCTCCAAACATA | + |
Preference number: 3 (lower is better) Translates to: SEHFQPRTRLAE*TLSPGLSPPNI Trigger: TATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGCCGTGTGCGGGGTTGGAAGTGTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
||
3UTR GCA 72 bp | CGAACAGAACTCACAGCGATTTCCCCGCATCCGGGATaGCCTGTGTGTATGGAATCCACACTGATTTCCATG | + |
Preference number: 3 (lower is better) Translates to: RTELTAISPHPG*PVCMESTLISM Trigger: CATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTGTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR GCA 72 bp | CATAAACTTTCGAACATCCAAAGGCCAGAGGAGCCCTaGGAGCTCACCAGCTGTGCCATCTGTTACCAAAGG | + |
Preference number: 3 (lower is better) Translates to: HKLSNIQRPEEP*ELTSCAICYQR Trigger: CCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCTTTGGATGTTCGAAAGTTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTCGGAACTGGGCGTGCTaGGGCTTCACTTTACTACTC | + |
Preference number: 3 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFRNWAC*GFTLLL Trigger: GAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCAAGTGACCCCTCAAAGTaGAAAGGAAAGGTAGCCTTG | + |
Preference number: 3 (lower is better) Translates to: QNSQRFPRIRDALCVWNPSDPSK*KGKVAL Trigger: CAAGGCTACCTTTCCTTTCAACTTTGAGGGGTCACT...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR GCA 72 bp | AACAACACCTCGTTCTCCATTCCCCGGAACTGGGCGTaGTTGGGCTTCACTTTACTACTCTCAAATATCCCC | + |
Preference number: 3 (lower is better) Translates to: NNTSFSIPRNWA*LGFTLLLSNIP Trigger: GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAATGGAGAACGAGGTGTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGACAGTACTATGGCAAATaGTCAACAGATGATGTTTGT | + |
Preference number: 3 (lower is better) Translates to: RPEEPCELTSCAICYQRRQYYGK*STDDVC Trigger: ACAAACATCATCTGTTGACAATTTGCCATAGTACTG...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGAGAATTGGTTTATAAATaGGTTCCAACTGGAACTGGT | + |
Preference number: 3 (lower is better) Translates to: RPEEPCELTSCAICYQRRELVYK*VPTGTG Trigger: ACCAGTTCCAGTTGGAACCAATTTATAAACCAATTC...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGACACAGATCGAGCTGTTaGTTGGGAGATTTAAATATT | + |
Preference number: 3 (lower is better) Translates to: RPEEPCELTSCAICYQRRHRSSC*LGDLNI Trigger: AATATTTAAATCTCCCAACAAACAGCTCGATCTGTG...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR TCA 72 bp | GAGGGAGGAAAAGGCTGGAGAGGCTTCACAACCAAGTaGCCCCTCAAAGTTGAAAGGAAAGGTAGCCTTGTT | + |
Preference number: 3 (lower is better) Translates to: EGGKGWRGFTTK*PLKVERKGSLV Trigger: AACAAGGCTACCTTTCCTTTCAACTTTGAGGGGTCACTTGGTTGTGAAGCCTCTCCAGCCTTTTCCTCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CCA 72 bp | ACATGGGAGTTGCATACAATGCAGATCCTTACCCAGTaGCCACAGCATGCCCTTAGTACCCCTAGAAGTCAA | + |
Preference number: 3 (lower is better) Translates to: TWELHTMQILTQ*PQHALSTPRSQ Trigger: TTGACTTCTAGGGGTACTAAGGGCATGCTGTGGCCACTGGGTAAGGATCTGCATTGTATGCAACTCCCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGCGGAACTGGGCGTGCTaGGGCTTCACTTTACTACTC | + |
Preference number: 3 (lower is better) Translates to: LTHCASAFWDMVIESRRVRNWAC*GFTLLL Trigger: GAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTACGGAACTGGGCGTGCTaGGGCTTCACTTTACTACTC | + |
Preference number: 3 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVRNWAC*GFTLLL Trigger: GAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR TCA 72 bp | ACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTaGGGGATAGATCCTCAGCTGGCTGAGCTGCTAAGC | + |
Preference number: 3 (lower is better) Translates to: TFILSKVRDWLD*GIDPQLAELLS Trigger: GCTTAGCAGCTCAGCCAGCTGAGGATCTATCCCTCAGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR GCA 72 bp | TGGCTGACTGCAGAGCTCCAGATGTGTGTAGTTGTATaGAGACCGACTACAGAAGAAACAACACCTCGTTCT | + |
Preference number: 3 (lower is better) Translates to: WLTAELQMCVVV*RPTTEETTPRS Trigger: AGAACGAGGTGTTGTTTCTTCTGTAGTCGGTCTGCATACAACTACACACATCTGGAGCTCTGCAGTCAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CCA 72 bp | AGAAGAAACAACACCTCGTTCTCCATTCCCCGGAACTaGGCGTGCTTGGGCTTCACTTTACTACTCTCAAAT | + |
Preference number: 3 (lower is better) Translates to: RRNNTSFSIPRN*ACLGFTLLLSN Trigger: ATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAATGGAGAACGAGGTGTTGTTTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CCA 72 bp | TGGCAGATGATGGATGAGTGTTGTGCACAAATTACATaGGCCTCCGTCTTCCAGCATGACATGGAAGAGCAA | + |
Preference number: 3 (lower is better) Translates to: WQMMDECCAQIT*ASVFQHDMEEQ Trigger: TTGCTCTTCCATGTCATGCTGGAAGACGGAGGCCCATGTAATTTGTGCACAACACTCATCCATCATCTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTAGAAAAGGACTGTTGTTaGCCAGGTAGACACAGCTGG | + |
Preference number: 3 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVEKDCC*PGRHSW Trigger: CCAGCTGTGTCTACCTGGCAAACAACAGTCCTTTTC...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR GCA 72 bp | ATCCACACTGATTTCCATGAAGTGTATGTAGTAGTATaGAGGCAGGGCAAGAAAGGCCCCTGCGTAAACACA | + |
Preference number: 3 (lower is better) Translates to: IHTDFHEVYVVV*RQGKKGPCVNT Trigger: TGTGTTTACGCAGGGGCCTTTCTTGCCCTGCCTGCATACTACTACATACACTTCATGGAAATCAGTGTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCAGTACTATGGCAAATaGTCAACAGATGATGTTTGT | + |
Preference number: 3 (lower is better) Translates to: IPRNWACLGFTLLLSNIPQYYGK*STDDVC Trigger: ACAAACATCATCTGTTGACAATTTGCCATAGTACTG...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTGAAGGCAAAAACACTTaGAATACAACAGCTGTATCA | + |
Preference number: 3 (lower is better) Translates to: RNWACLGFTLLLSNIPRIEGKNT*NTTAVS Trigger: TGATACAGCTGTTGTATTCAAAGTGTTTTTGCCTTC...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTTTTGGGATATGGTCATaGAAAGTAGAAGAGTGTGCA | + |
Preference number: 3 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFFGIWS*KVEECA Trigger: TGCACACTCTTCTACTTTCAATGACCATATCCCAAA...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTATCCTTTCGCTTTGCTTaGTTCCCTAGGATGGCTTCT | + |
Preference number: 3 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVSFRFA*FPRMAS Trigger: AGAAGCCATCCTAGGGAACAAAGCAAAGCGAAAGGA...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR GCA 72 bp | CAGCCTCATTATCAGATAAGCAGGTTCATAACGGGTTaGACATACAGTCAAGACAGTGGTTTGGTGGGATTC | + |
Preference number: 3 (lower is better) Translates to: QPHYQISRFITG*TYSQDSGLVGF Trigger: GAATCCCACCAAACCACTGTCTTGACTGTATGTGCAACCCGTTATGAACCTGCTTATCTGATAATGAGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTACTGGAACTGGTCATTaGGAATTTCCTACACGGGAA | + |
Preference number: 3 (lower is better) Translates to: CDVGPRHLFYPKSETGWTTGTGH*EFPTRE Trigger: TTCCCGTGTAGGAAATTCCAAATGACCAGTTCCAGT...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTATTTACCACAGCTCCTTaGTCTTCATTCCCTTTCCAC | + |
Preference number: 3 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVFTTAP*SSFPFH Trigger: GTGGAAAGGGAATGAAGACAAAGGAGCTGTGGTAAA...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGTTTACCACAGCTCCTTaGTCTTCATTCCCTTTCCAC | + |
Preference number: 3 (lower is better) Translates to: LTHCASAFWDMVIESRRVFTTAP*SSFPFH Trigger: GTGGAAAGGGAATGAAGACAAAGGAGCTGTGGTAAA...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CCA 72 bp | GTTAAATGTCTTAACAGAAAATTCTGTACGCCTCGATaGATGACACTCGGGCTTCACAAGCCTGTATCAGAT | + |
Preference number: 3 (lower is better) Translates to: VKCLNRKFCTPR*MTLGLHKPVSD Trigger: ATCTGATACAGGCTTGTGAAGCCCGAGTGTCATCCATCGAGGCGTACAGAATTTTCTGTTAAGACATTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CCA 72 bp | AAACGTTCTTCACTGACACACTGTGCCTCAGCATTTTaGGATATGGTCATTGAAAGTAGAAGAGTGTGCACT | + |
Preference number: 3 (lower is better) Translates to: KRSSLTHCASAF*DMVIESRRVCT Trigger: AGTGCACACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAGTGAAGAACGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTACAGTACTATGGCAAATaGTCAACAGATGATGTTTGT | + |
Preference number: 3 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVQYYGK*STDDVC Trigger: ACAAACATCATCTGTTGACAATTTGCCATAGTACTG...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGGAAGGCAAAAACACTTaGAATACAACAGCTGTATCA | + |
Preference number: 3 (lower is better) Translates to: LTHCASAFWDMVIESRRVEGKNT*NTTAVS Trigger: TGATACAGCTGTTGTATTCAAAGTGTTTTTGCCTTC...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTAGAAGGCAAAAACACTTaGAATACAACAGCTGTATCA | + |
Preference number: 3 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVEGKNT*NTTAVS Trigger: TGATACAGCTGTTGTATTCAAAGTGTTTTTGCCTTC...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR TCA 72 bp | CACAGCAGATACTGTGCTGTGCTTGCCAAATTAAGATaGCTGGTTAATAGCAGTACTATGGCAAATTGTCAA | + |
Preference number: 3 (lower is better) Translates to: HSRYCAVLAKLR*LVNSSTMANCQ Trigger: TTGACAATTTGCCATAGTACTGCTATTAACCAGTCATCTTAATTTGGCAAGCACAGCACAGTATCTGCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR GCA 72 bp | GCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGTaGACTGTCTTTTACCACAGCTCCTTTGTCTTCATT | + |
Preference number: 3 (lower is better) Translates to: AFWDMVIESRRV*TVFYHSSFVFI Trigger: AATGAAGACAAAGGAGCTGTGGTAAAAGACAGTGCACACTCTTCTACTTTCAATGACCATATCCCAAAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR GCA 72 bp | CATGCAGTACATTTGCATAGTGTATTTTCCCCAGCATaGCTTGTAGAACGCTACGCATATCTATGTAACAAA | + |
Preference number: 3 (lower is better) Translates to: HAVHLHSVFSPA*LVERYAYLCNK Trigger: TTTGTTACATAGATATGCGTAGCGTTCTACAAGGCATGCTGGGGAAAATACACTATGCAAATGTACTGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR GCA 72 bp | TTATGTCTAGCTCAAATTGGGTCTTTAGAAAACACATaGATGTGTCATTTCAGAGGCAAGCCCTTTCATAAA | + |
Preference number: 3 (lower is better) Translates to: LCLAQIGSLENT*MCHFRGKPFHK Trigger: TTTATGAAAGGGCTTGCCTCTGAAATGACACATGCATGTGTTTTCTAAAGACCCAATTTGAGCTAGACATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CCA 72 bp | ACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTaGTTTATAAATTGGTTCCAACTGGAACTGGTCATT | + |
Preference number: 3 (lower is better) Translates to: TFQSIHPNSNRN*FINWFQLELVI Trigger: AATGACCAGTTCCAGTTGGAACCAATTTATAAACCAATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAACAGTACTATGGCAAATaGTCAACAGATGATGTTTGT | + |
Preference number: 3 (lower is better) Translates to: KAEQQSILNLYTQVHSLQQYYGK*STDDVC Trigger: ACAAACATCATCTGTTGACAATTTGCCATAGTACTG...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAAGAATTGGTTTATAAATaGGTTCCAACTGGAACTGGT | + |
Preference number: 3 (lower is better) Translates to: KAEQQSILNLYTQVHSLQELVYK*VPTGTG Trigger: ACCAGTTCCAGTTGGAACCAATTTATAAACCAATTC...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR-3UTR CAA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACAGAATTGGTTTATAAATaGGTTCCAACTGGAACTGGT | + |
Preference number: 3 (lower is better) Translates to: LNLYTQVHSLQLNALMRTELVYK*VPTGTG Trigger: ACCAGTTCCAGTTGGAACCAATTTATAAACCAATTC...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR TCA 72 bp | GATTTTGTCAACTTCAAACTGACTAACAGTACTGACTaGACAGAAGGCAAAAACACTTTGAATACAACAGCT | + |
Preference number: 3 (lower is better) Translates to: DFVNFKLTNSTD*TEGKNTLNTTA Trigger: AGCTGTTGTATTCAAAGTGTTTTTGCCTTCTGTTCAGTCAGTACTGTTAGTCAGTTTGAAGTTGACAAAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR TCA 72 bp | TTAATAGAACTGCAAAGCAAAATAGGTATGGACTTTTaGTGGCAGATGATGGATGAGTGTTGTGCACAAATT | + |
Preference number: 3 (lower is better) Translates to: LIELQSKIGMDF*WQMMDECCAQI Trigger: AATTTGTGCACAACACTCATCCATCATCTGCCATCAAAAGTCCATACCTATTTTGCTTTGCAGTTCTATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CCA 72 bp | GCATTAGTAGAAAGACACTTTATGTCTAGCTCAAATTaGGTCTTTAGAAAACACATGCATGTGTCATTTCAG | + |
Preference number: 3 (lower is better) Translates to: ALVERHFMSSSN*VFRKHMHVSFQ Trigger: CTGAAATGACACATGCATGTGTTTTCTAAAGACCCAATTTGAGCTAGACATAAAGTGTCTTTCTACTAATGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGATCCTCCGGGTCGTGGTaGCTCGGGCCACCTGTGAGC | + |
Preference number: 4 (lower is better) Translates to: RPEEPCELTSCAICYQRRSSGSW*LGPPVS Trigger: GCTCACAGGTGGCCCGAGGCACCACGACCCGGAGGA...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078324.7 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCGCCTCGGGCCACCTGTaGGCTGGGGGAGTGCGGCCC | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPASGHL*AGGVRP Trigger: GGGCCGCACTCCCCCAGCTCACAGGTGGCCCGAGGC...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078324.7 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGATGCTGTGGGATATGGTaGGAGGGCTGTGGAGCCCAC | + |
Preference number: 4 (lower is better) Translates to: RPEEPCELTSCAICYQRRCCGIW*EGCGAH Trigger: GTGGGCTCCACAGCCCTCTCACCATATCCCACAGCA...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCTGCTCCTCCGGGTCGTaGTGCCTCGGGCCACCTGTG | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPCSSGS*CLGPPV Trigger: CACAGGTGGCCCGAGGCACCACGACCCGGAGGAGCA...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078324.7 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGGCCTCGGGCCACCTGTaGGCTGGGGGAGTGCGGCCC | + |
Preference number: 4 (lower is better) Translates to: LTHCASAFWDMVIESRRVASGHL*AGGVRP Trigger: GGGCCGCACTCCCCCAGCTCACAGGTGGCCCGAGGC...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078324.7 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCATGGTCTCGGCTGTGCTaGGAGCTGGAAGACAAGCGG | + |
Preference number: 4 (lower is better) Translates to: QNSQRFPRIRDALCVWNPWSRLC*ELEDKR Trigger: CCGCTTGTCTTCCAGCTCCCAGCACAGCCGAGACCA...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCACCGATCTTTTCAACCTaGTCCTCCGGGTCGTGGTGC | + |
Preference number: 4 (lower is better) Translates to: QNSQRFPRIRDALCVWNPPIFST*SSGSWC Trigger: GCACCACGACCCGGAGGAGCAGGTTGAAAAGATCGG...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078324.7 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCATGGCGTCAAAGGAGATaGCTGTGCTGGGAACGGGCA | + |
Preference number: 4 (lower is better) Translates to: QNSQRFPRIRDALCVWNPWRQRR*LCWERA Trigger: TGCCCGTTCCCAGCACAGCCATCTCCTTTGACGCCA...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCATACTGCTCGTGTGGGTaGCACGCCAGTATGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: QNSQRFPRIRDALCVWNPYCSCG*HASMPP Trigger: TGGAGGCATACTGGCGTGCCACCCACACGAGCAGTA...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGACTCGATTTCCCGCCATaGAAACGGCCTCTTTTCTGT | + |
Preference number: 4 (lower is better) Translates to: RPEEPCELTSCAICYQRRLDFPP*KRPLFC Trigger: ACAGAAAAGAGGCCGTTTTCATGGCGGGAAATCGAG...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGACTCAAGCTGGATAGCTaGTTGCTGTTCTCGCTCTTG | + |
Preference number: 4 (lower is better) Translates to: RPEEPCELTSCAICYQRRLKLDS*LLFSLL Trigger: CAAGAGCGAGAACAGCAAGCAGCTATCCAGCTTGAG...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGAGACATCGGAGTCCGATaGCCTGCTTGTATAGGAATC | + |
Preference number: 4 (lower is better) Translates to: RPEEPCELTSCAICYQRRDIGVR*PACIGI Trigger: GATTCCTATACAAGCAGGCCATCGGACTCCGATGTC...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCGTGCTACTGCTCGTGTaGGTGGCACGCCAGTATGCC | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPVLLLV*VARQYA Trigger: GGCATACTGGCGTGCCACCCACACGAGCAGTAGCAC...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCTGGTCTCGGCTGTGCTaGGAGCTGGAAGACAAGCGG | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPWSRLC*ELEDKR Trigger: CCGCTTGTCTTCCAGCTCCCAGCACAGCCGAGACCA...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTTGCTGTGGGATATGGTaGGAGGGCTGTGGAGCCCAC | + |
Preference number: 4 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFCCGIW*EGCGAH Trigger: GTGGGCTCCACAGCCCTCTCACCATATCCCACAGCA...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCACAAAGGAGATGGCTGTaGTGGGAACGGGCACATCTT | + |
Preference number: 4 (lower is better) Translates to: QNSQRFPRIRDALCVWNPQRRWL*WERAHL Trigger: AAGATGTGCCCGTTCCCAGCACAGCCATCTCCTTTG...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCTGGCGTCAAAGGAGATaGCTGTGCTGGGAACGGGCA | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPWRQRR*LCWERA Trigger: TGCCCGTTCCCAGCACAGCCATCTCCTTTGACGCCA...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGAATTCTCCAAGCGCAGTaGACTTGGGATGAAGCCAAT | + |
Preference number: 4 (lower is better) Translates to: RPEEPCELTSCAICYQRRILQAQ*TWDEAN Trigger: ATTGGCTTCATCCCAAGTCCACTGCGCTTGGAGAAT...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCTACTGCTCGTGTGGGTaGCACGCCAGTATGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPYCSCG*HASMPP Trigger: TGGAGGCATACTGGCGTGCCACCCACACGAGCAGTA...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTGTGCTACTGCTCGTGTaGGTGGCACGCCAGTATGCC | + |
Preference number: 4 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFVLLLV*VARQYA Trigger: GGCATACTGGCGTGCCACCCACACGAGCAGTAGCAC...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCGGCTGTGCTGGGAGCTaGAAGACAAGCGGTTCCTAC | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPGCAGS*KTSGSY Trigger: GTAGGAACCGCTTGTCTTCCAGCTCCCAGCACAGCC...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CAA 72 bp | AACACCTCGTTCTCCATTCCCCGGAACTGGGCGTGCTaGGGCTTCACTTTACTACTCTCAAATATCCCCCGG | + |
Preference number: 4 (lower is better) Translates to: NTSFSIPRNWAC*GFTLLLSNIPR Trigger: CCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAATGGAGAACGAGGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTGCAGTGGACTTGGGATaGAGCCAATCTCACAGCCCT | + |
Preference number: 4 (lower is better) Translates to: RNWACLGFTLLLSNIPRIAVDLG*SQSHSP Trigger: AGGGCTGTGAGATTGGCTTCATCCCAAGTCCACTGC...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCGCAGTGGACTTGGGATaGAGCCAATCTCACAGCCCT | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPAVDLG*SQSHSP Trigger: AGGGCTGTGAGATTGGCTTCATCCCAAGTCCACTGC...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGACTGTGTCTCATTCGCTaGCTCTGTAATCCAGAGATT | + |
Preference number: 4 (lower is better) Translates to: RPEEPCELTSCAICYQRRLCLIR*LCNPEI Trigger: AATCTCTGGATTACAGAGTCAGCGAATGAGACACAG...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTAGCTGGATAGCTGCTTaGTGTTCTCGCTCTTGCCGG | + |
Preference number: 4 (lower is better) Translates to: RNWACLGFTLLLSNIPRISWIAA*CSRSCR Trigger: CCGGCAAGAGCGAGAACAGCAAGCAGCTATCCAGCT...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCACTCAAGCTGGATAGCTaGTTGCTGTTCTCGCTCTTG | + |
Preference number: 4 (lower is better) Translates to: QNSQRFPRIRDALCVWNPLKLDS*LLFSLL Trigger: CAAGAGCGAGAACAGCAAGCAGCTATCCAGCTTGAG...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCAGCGGTTCCTACTCTTaGGGGCCCTCTCATTGTGGT | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPSGSYS*GPSHCG Trigger: ACCACAATGAGAGGGCCCGCAAGAGTAGGAACCGCT...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCAGACATCGGAGTCCGATaGCCTGCTTGTATAGGAATC | + |
Preference number: 4 (lower is better) Translates to: QNSQRFPRIRDALCVWNPDIGVR*PACIGI Trigger: GATTCCTATACAAGCAGGCCATCGGACTCCGATGTC...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGACAAAAGCTACAGGTTTaGACTTCGCTCTCTCAAGCT | + |
Preference number: 4 (lower is better) Translates to: RPEEPCELTSCAICYQRRQKLQV*TSLSQA Trigger: AGCTTGAGAGAGCGAAGTCCAAACCTGTAGCTTTTG...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCACAAGCGCAGTGGACTTaGGATGAAGCCAATCTCACA | + |
Preference number: 4 (lower is better) Translates to: QNSQRFPRIRDALCVWNPQAQWT*DEANLT Trigger: TGTGAGATTGGCTTCATCCCAAGTCCACTGCGCTTG...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGAGTTTTGCTGTTGTTGTaGGAGTTGCTCGGAATGTTC | + |
Preference number: 4 (lower is better) Translates to: RPEEPCELTSCAICYQRRVLLLL*ELLGMF Trigger: GAACATTCCGAGCAACTCCCACAACAACAGCAAAAC...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS-3UTR CCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGACCGCTAAGCTGGATCTaGTGTTGGAACGTTCAATTA | + |
Preference number: 4 (lower is better) Translates to: RPEEPCELTSCAICYQRRPLSWI*CWNVQL Trigger: TAATTGAACGTTCCAACACCAGATCCAGCTTAGCGG...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTGGCTGTGCTGGGAGCTaGAAGACAAGCGGTTCCTAC | + |
Preference number: 4 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFGCAGS*KTSGSY Trigger: GTAGGAACCGCTTGTCTTCCAGCTCCCAGCACAGCC...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTAGCTGGATAGCTGCTTaGTGTTCTCGCTCTTGCCGG | + |
Preference number: 4 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFSWIAA*CSRSCR Trigger: CCGGCAAGAGCGAGAACAGCAAGCAGCTATCCAGCT...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTCAAAGGAGATGGCTGTaGTGGGAACGGGCACATCTT | + |
Preference number: 4 (lower is better) Translates to: RNWACLGFTLLLSNIPRIQRRWL*WERAHL Trigger: AAGATGTGCCCGTTCCCAGCACAGCCATCTCCTTTG...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGATGCTCCGTCACTTTCTaGTTCTGTTTTGCTGTTGTT | + |
Preference number: 4 (lower is better) Translates to: RPEEPCELTSCAICYQRRCSVTF*FCFAVV Trigger: AACAACAGCAAAACAGAAGCAGAAAGTGACGGAGCA...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS-3UTR GCA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGAGAACATTCAAGTGTTTaGTTTGGGACTTTCCTCTGG | + |
Preference number: 4 (lower is better) Translates to: RPEEPCELTSCAICYQRREHSSV*FGTFLW Trigger: CCAGAGGAAAGTCCCAAAGCAAACACTTGAATGTTC...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTTCGGCCGCCACCAGTTaGACATTCAAGTGTTTGCTT | + |
Preference number: 4 (lower is better) Translates to: RNWACLGFTLLLSNIPRISAATS*TFKCLL Trigger: AAGCAAACACTTGAATGTTCAACTGGTGGCGGCCGA...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTATGCTGTGGGATATGGTaGGAGGGCTGTGGAGCCCAC | + |
Preference number: 4 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVCCGIW*EGCGAH Trigger: GTGGGCTCCACAGCCCTCTCACCATATCCCACAGCA...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTTCCTCCGGGTCGTGGTaGCTCGGGCCACCTGTGAGC | + |
Preference number: 4 (lower is better) Translates to: STCSSRLSSQFTQIPTGISSGSW*LGPPVS Trigger: GCTCACAGGTGGCCCGAGGCACCACGACCCGGAGGA...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078324.7 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTTGCTGTTCTCGCTCTTaGCGGATCGCTTCCCGGTCC | + |
Preference number: 4 (lower is better) Translates to: CDVGPRHLFYPKSETGWTCCSRS*RIASRS Trigger: GGACCGGGAAGCGATCCGGCAAGAGCGAGAACAGCA...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTCTCAAGCTGGATAGCTaGTTGCTGTTCTCGCTCTTG | + |
Preference number: 4 (lower is better) Translates to: RNWACLGFTLLLSNIPRILKLDS*LLFSLL Trigger: CAAGAGCGAGAACAGCAAGCAGCTATCCAGCTTGAG...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTAGTGCTACTGCTCGTGTaGGTGGCACGCCAGTATGCC | + |
Preference number: 4 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVVLLLV*VARQYA Trigger: GGCATACTGGCGTGCCACCCACACGAGCAGTAGCAC...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCATCCAGAGATTGCTGTaGGATATGGTGAGAGGGCTG | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPIQRLL*DMVRGL Trigger: CAGCCCTCTCACCATATCCCACAGCAATCTCTGGAT...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTTGTATAGGAATCTGCTaGCCCCTGTCTGAGGATGAA | + |
Preference number: 4 (lower is better) Translates to: RNWACLGFTLLLSNIPRICIGIC*PLSEDE Trigger: TTCATCCTCAGACAGGGGTCAGCAGATTCCTATACA...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078324.7 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTTGCTCGGAATGTTCCTaGTACCATTTCTCCCAGACT | + |
Preference number: 4 (lower is better) Translates to: RNWACLGFTLLLSNIPRICSECS*YHFSQT Trigger: AGTCTGGGAGAAATGGTATCAGGAACATTCCGAGCA...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTTCGGCCGCCACCAGTTaGACATTCAAGTGTTTGCTT | + |
Preference number: 4 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFSAATS*TFKCLL Trigger: AAGCAAACACTTGAATGTTCAACTGGTGGCGGCCGA...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACATGCTCCTCCGGGTCGTaGTGCCTCGGGCCACCTGTG | + |
Preference number: 4 (lower is better) Translates to: LNLYTQVHSLQLNALMRTCSSGS*CLGPPV Trigger: CACAGGTGGCCCGAGGCACCACGACCCGGAGGAGCA...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078324.7 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTTTCGCTCTCTCAAGCTaGATAGCTGCTTGCTGTTCT | + |
Preference number: 4 (lower is better) Translates to: RNWACLGFTLLLSNIPRIFALSS*IAACCS Trigger: AGAACAGCAAGCAGCTATCCAGCTTGAGAGAGCGAA...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTATGGCGTCAAAGGAGATaGCTGTGCTGGGAACGGGCA | + |
Preference number: 4 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVWRQRR*LCWERA Trigger: TGCCCGTTCCCAGCACAGCCATCTCCTTTGACGCCA...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCTGTGAAGAAAGTCCTTaGCGTCAAAGGAGATGGCTG | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPCEESP*RQRRWL Trigger: CAGCCATCTCCTTTGACGCCAAGGACTTTCTTCACA...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTTGTGAAGAAAGTCCTTaGCGTCAAAGGAGATGGCTG | + |
Preference number: 4 (lower is better) Translates to: RNWACLGFTLLLSNIPRICEESP*RQRRWL Trigger: CAGCCATCTCCTTTGACGCCAAGGACTTTCTTCACA...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTCCATTTCTCCCAGACTaGAGGAAGAGTTTCCACTCG | + |
Preference number: 4 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFPFLPD*RKSFHS Trigger: CGAGTGGAAACTCTTCCTCCAGTCTGGGAGAAATGG...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCAAGCTGGATCTGGTGTTaGAACGTTCAATTATTGCTC | + |
Preference number: 4 (lower is better) Translates to: QNSQRFPRIRDALCVWNPSWIWC*NVQLLL Trigger: GAGCAATAATTGAACGTTCCAACACCAGATCCAGCT...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTTACTGCTCGTGTGGGTaGCACGCCAGTATGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: CDVGPRHLFYPKSETGWTYCSCG*HASMPP Trigger: TGGAGGCATACTGGCGTGCCACCCACACGAGCAGTA...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTATCCAGAGATTGCTGTaGGATATGGTGAGAGGGCTG | + |
Preference number: 4 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFIQRLL*DMVRGL Trigger: CAGCCCTCTCACCATATCCCACAGCAATCTCTGGAT...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCAGAATTCTCTGTAGAATaGTTGCTGTGTCTCATTCGC | + |
Preference number: 4 (lower is better) Translates to: QNSQRFPRIRDALCVWNPEFSVE*LLCLIR Trigger: GCGAATGAGACACAGCAACCATTCTACAGAGAATTC...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTGGCTGTGCTGGGAGCTaGAAGACAAGCGGTTCCTAC | + |
Preference number: 4 (lower is better) Translates to: CDVGPRHLFYPKSETGWTGCAGS*KTSGSY Trigger: GTAGGAACCGCTTGTCTTCCAGCTCCCAGCACAGCC...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGGCAGTGGACTTGGGATaGAGCCAATCTCACAGCCCT | + |
Preference number: 4 (lower is better) Translates to: LTHCASAFWDMVIESRRVAVDLG*SQSHSP Trigger: AGGGCTGTGAGATTGGCTTCATCCCAAGTCCACTGC...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCTGTGTCTCATTCGCTaGCTCTGTAATCCAGAGATT | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPLCLIR*LCNPEI Trigger: AATCTCTGGATTACAGAGTCAGCGAATGAGACACAG...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTAAGCTGGATAGCTGCTTaGTGTTCTCGCTCTTGCCGG | + |
Preference number: 4 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVSWIAA*CSRSCR Trigger: CCGGCAAGAGCGAGAACAGCAAGCAGCTATCCAGCT...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCAAAAGCTACAGGTTTaGACTTCGCTCTCTCAAGCT | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPQKLQV*TSLSQA Trigger: AGCTTGAGAGAGCGAAGTCCAAACCTGTAGCTTTTG...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CAA 72 bp | GTAGAAGAGTGTGCACTGTCTTTTACCACAGCTCCTTaGTCTTCATTCCCTTTCCACGCCCCCATTCTCTAC | + |
Preference number: 4 (lower is better) Translates to: VEECALSFTTAP*SSFPFHAPILY Trigger: GTAGAGAATGGGGGCGTGGAAAGGGAATGAAGACAAAGGAGCTGTGGTAAAAGACAGTGCACACTCTTCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCATCAAGAACAACCAATTaGAAAGATCTTGCCAACTCA | + |
Preference number: 4 (lower is better) Translates to: QNSQRFPRIRDALCVWNPSRTTN*KDLANS Trigger: TGAGTTGGCAAGATCTTTGCAATTGGTTGTTCTTGA...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCGTGGTTGATGGTGTCTaGATCAAGAACAACCAATTG | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPVVDGV*IKNNQL Trigger: CAATTGGTTGTTCTTGATGCAGACACCATCAACCAC...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTGTTTTGCTGTTGTTGTaGGAGTTGCTCGGAATGTTC | + |
Preference number: 4 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFVLLLL*ELLGMF Trigger: GAACATTCCGAGCAACTCCCACAACAACAGCAAAAC...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS-3UTR CCA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTAGCTGGATCTGGTGTTaGAACGTTCAATTATTGCTC | + |
Preference number: 4 (lower is better) Translates to: RNWACLGFTLLLSNIPRISWIWC*NVQLLL Trigger: GAGCAATAATTGAACGTTCCAACACCAGATCCAGCT...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTGTGCTACTGCTCGTGTaGGTGGCACGCCAGTATGCC | + |
Preference number: 4 (lower is better) Translates to: STCSSRLSSQFTQIPTGIVLLLV*VARQYA Trigger: GGCATACTGGCGTGCCACCCACACGAGCAGTAGCAC...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTGAATTCTCTGTAGAATaGTTGCTGTGTCTCATTCGC | + |
Preference number: 4 (lower is better) Translates to: RNWACLGFTLLLSNIPRIEFSVE*LLCLIR Trigger: GCGAATGAGACACAGCAACCATTCTACAGAGAATTC...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCAGCTTCGTCTTTCAATTaGAGAATTCTCTGTAGAATG | + |
Preference number: 4 (lower is better) Translates to: QNSQRFPRIRDALCVWNPASSFN*RILCRM Trigger: CATTCTACAGAGAATTCTCCAATTGAAAGACGAAGC...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCTTTTCTGTTCCTGTTaGATCCGAATATTCTCCAAG | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPLFCSC*IRIFSK Trigger: CTTGGAGAATATTCGGATTCAACAGGAACAGAAAAG...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTCTTTTCTGTTCCTGTTaGATCCGAATATTCTCCAAG | + |
Preference number: 4 (lower is better) Translates to: RNWACLGFTLLLSNIPRILFCSC*IRIFSK Trigger: CTTGGAGAATATTCGGATTCAACAGGAACAGAAAAG...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTTGTCACTCTTGTTATTaGTATCCTCCCATCAAACCT | + |
Preference number: 4 (lower is better) Translates to: RNWACLGFTLLLSNIPRICHSCY*YPPIKP Trigger: AGGTTTGATGGGAGGATATCAATAACAAGAGTGACA...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCTGTCACTCTTGTTATTaGTATCCTCCCATCAAACCT | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPCHSCY*YPPIKP Trigger: AGGTTTGATGGGAGGATATCAATAACAAGAGTGACA...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTTGCTCCGTCACTTTCTaGTTCTGTTTTGCTGTTGTT | + |
Preference number: 4 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFCSVTF*FCFAVV Trigger: AACAACAGCAAAACAGAAGCAGAAAGTGACGGAGCA...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS-3UTR GCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTGTGGTTGATGGTGTCTaGATCAAGAACAACCAATTG | + |
Preference number: 4 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFVVDGV*IKNNQL Trigger: CAATTGGTTGTTCTTGATGCAGACACCATCAACCAC...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGCAAGCGCAGTGGACTTaGGATGAAGCCAATCTCACA | + |
Preference number: 4 (lower is better) Translates to: LTHCASAFWDMVIESRRVQAQWT*DEANLT Trigger: TGTGAGATTGGCTTCATCCCAAGTCCACTGCGCTTG...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTCAAGCGCAGTGGACTTaGGATGAAGCCAATCTCACA | + |
Preference number: 4 (lower is better) Translates to: CDVGPRHLFYPKSETGWTQAQWT*DEANLT Trigger: TGTGAGATTGGCTTCATCCCAAGTCCACTGCGCTTG...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTACCATTTCTCCCAGACTaGAGGAAGAGTTTCCACTCG | + |
Preference number: 4 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVPFLPD*RKSFHS Trigger: CGAGTGGAAACTCTTCCTCCAGTCTGGGAGAAATGG...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTAGCTGGATCTGGTGTTaGAACGTTCAATTATTGCTC | + |
Preference number: 4 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFSWIWC*NVQLLL Trigger: GAGCAATAATTGAACGTTCCAACACCAGATCCAGCT...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTAATCCAGAGATTGCTGTaGGATATGGTGAGAGGGCTG | + |
Preference number: 4 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVIQRLL*DMVRGL Trigger: CAGCCCTCTCACCATATCCCACAGCAATCTCTGGAT...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTGAATTCTCTGTAGAATaGTTGCTGTGTCTCATTCGC | + |
Preference number: 4 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFEFSVE*LLCLIR Trigger: GCGAATGAGACACAGCAACCATTCTACAGAGAATTC...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACATGGTCTCGGCTGTGCTaGGAGCTGGAAGACAAGCGG | + |
Preference number: 4 (lower is better) Translates to: LNLYTQVHSLQLNALMRTWSRLC*ELEDKR Trigger: CCGCTTGTCTTCCAGCTCCCAGCACAGCCGAGACCA...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTATGTATAGGAATCTGCTaGCCCCTGTCTGAGGATGAA | + |
Preference number: 4 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVCIGIC*PLSEDE Trigger: TTCATCCTCAGACAGGGGTCAGCAGATTCCTATACA...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078324.7 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTATGCTCGGAATGTTCCTaGTACCATTTCTCCCAGACT | + |
Preference number: 4 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVCSECS*YHFSQT Trigger: AGTCTGGGAGAAATGGTATCAGGAACATTCCGAGCA...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTTGCTCGGAATGTTCCTaGTACCATTTCTCCCAGACT | + |
Preference number: 4 (lower is better) Translates to: CDVGPRHLFYPKSETGWTCSECS*YHFSQT Trigger: AGTCTGGGAGAAATGGTATCAGGAACATTCCGAGCA...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACACCGATCTTTTCAACCTaGTCCTCCGGGTCGTGGTGC | + |
Preference number: 4 (lower is better) Translates to: LNLYTQVHSLQLNALMRTPIFST*SSGSWC Trigger: GCACCACGACCCGGAGGAGCAGGTTGAAAAGATCGG...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078324.7 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTAGCTGGATAGCTGCTTaGTGTTCTCGCTCTTGCCGG | + |
Preference number: 4 (lower is better) Translates to: STCSSRLSSQFTQIPTGISWIAA*CSRSCR Trigger: CCGGCAAGAGCGAGAACAGCAAGCAGCTATCCAGCT...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTTCAAGAACAACCAATTaGAAAGATCTTGCCAACTCA | + |
Preference number: 4 (lower is better) Translates to: RNWACLGFTLLLSNIPRISRTTN*KDLANS Trigger: TGAGTTGGCAAGATCTTTGCAATTGGTTGTTCTTGA...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTAGCGGTTCCTACTCTTaGGGGCCCTCTCATTGTGGT | + |
Preference number: 4 (lower is better) Translates to: STCSSRLSSQFTQIPTGISGSYS*GPSHCG Trigger: ACCACAATGAGAGGGCCCGCAAGAGTAGGAACCGCT...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTTTCGCTCTCTCAAGCTaGATAGCTGCTTGCTGTTCT | + |
Preference number: 4 (lower is better) Translates to: CDVGPRHLFYPKSETGWTFALSS*IAACCS Trigger: AGAACAGCAAGCAGCTATCCAGCTTGAGAGAGCGAA...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTATTCGCTCTCTCAAGCTaGATAGCTGCTTGCTGTTCT | + |
Preference number: 4 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVFALSS*IAACCS Trigger: AGAACAGCAAGCAGCTATCCAGCTTGAGAGAGCGAA...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTTGTGAAGAAAGTCCTTaGCGTCAAAGGAGATGGCTG | + |
Preference number: 4 (lower is better) Translates to: CDVGPRHLFYPKSETGWTCEESP*RQRRWL Trigger: CAGCCATCTCCTTTGACGCCAAGGACTTTCTTCACA...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGATTCTCCAAGCGCAGTaGACTTGGGATGAAGCCAAT | + |
Preference number: 4 (lower is better) Translates to: LTHCASAFWDMVIESRRVILQAQ*TWDEAN Trigger: ATTGGCTTCATCCCAAGTCCACTGCGCTTGGAGAAT...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTAATTCTCCAAGCGCAGTaGACTTGGGATGAAGCCAAT | + |
Preference number: 4 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVILQAQ*TWDEAN Trigger: ATTGGCTTCATCCCAAGTCCACTGCGCTTGGAGAAT...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCGCTTCGTCTTTCAATTaGAGAATTCTCTGTAGAATG | + |
Preference number: 4 (lower is better) Translates to: IPRNWACLGFTLLLSNIPASSFN*RILCRM Trigger: CATTCTACAGAGAATTCTCCAATTGAAAGACGAAGC...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CAA 72 bp | GCAGCCTCATTATCAGATAAGCAGGTTCATAACGGGTaGCACATACAGTCAAGACAGTGGTTTGGTGGGATT | + |
Preference number: 4 (lower is better) Translates to: AASLSDKQVHNG*HIQSRQWFGGI Trigger: AATCCCACCAAACCACTGTCTTGACTGTATGTGCAACCCGTTATGAACCTGCTTATCTGATAATGAGGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CAA 72 bp | GAGGCTACATTTGGCACAGAGGTAGTTCCTTTCGCTTaGCTTTGTTCCCTAGGATGGCTTCTTGTTAAACTC | + |
Preference number: 4 (lower is better) Translates to: EATFGTEVVPFA*LCSLGWLLVKL Trigger: GAGTTTAACAAGAAGCCATCCTAGGGAACAAAGCAAAGCGAAAGGAACTACCTCTGTGCCAAATGTAGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAAGCAGTGGACTTGGGATaGAGCCAATCTCACAGCCCT | + |
Preference number: 4 (lower is better) Translates to: KAEQQSILNLYTQVHSLQAVDLG*SQSHSP Trigger: AGGGCTGTGAGATTGGCTTCATCCCAAGTCCACTGC...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTCAAAGGAGATGGCTGTaGTGGGAACGGGCACATCTT | + |
Preference number: 4 (lower is better) Translates to: STCSSRLSSQFTQIPTGIQRRWL*WERAHL Trigger: AAGATGTGCCCGTTCCCAGCACAGCCATCTCCTTTG...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACAAGCGGTTCCTACTCTTaGGGGCCCTCTCATTGTGGT | + |
Preference number: 4 (lower is better) Translates to: LNLYTQVHSLQLNALMRTSGSYS*GPSHCG Trigger: ACCACAATGAGAGGGCCCGCAAGAGTAGGAACCGCT...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGCAAAAGCTACAGGTTTaGACTTCGCTCTCTCAAGCT | + |
Preference number: 4 (lower is better) Translates to: LTHCASAFWDMVIESRRVQKLQV*TSLSQA Trigger: AGCTTGAGAGAGCGAAGTCCAAACCTGTAGCTTTTG...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTCCGCTAAGCTGGATCTaGTGTTGGAACGTTCAATTA | + |
Preference number: 4 (lower is better) Translates to: CDVGPRHLFYPKSETGWTPLSWI*CWNVQL Trigger: TAATTGAACGTTCCAACACCAGATCCAGCTTAGCGG...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CAA 72 bp | AATGTTGATATGAGGTTTGGTGCAATTACATGGGAGTaGCATACAATGCAGATCCTTACCCAGTGGCCACAG | + |
Preference number: 4 (lower is better) Translates to: NVDMRFGAITWE*HTMQILTQWPQ Trigger: CTGTGGCCACTGGGTAAGGATCTGCATTGTATGCAACTCCCATGTAATTGCACCAAACCTCATATCAACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAACAAAGGAGATGGCTGTaGTGGGAACGGGCACATCTT | + |
Preference number: 4 (lower is better) Translates to: KAEQQSILNLYTQVHSLQQRRWL*WERAHL Trigger: AAGATGTGCCCGTTCCCAGCACAGCCATCTCCTTTG...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTTGCTCCGTCACTTTCTaGTTCTGTTTTGCTGTTGTT | + |
Preference number: 4 (lower is better) Translates to: CDVGPRHLFYPKSETGWTCSVTF*FCFAVV Trigger: AACAACAGCAAAACAGAAGCAGAAAGTGACGGAGCA...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS-3UTR GCA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGGAACATTCAAGTGTTTaGTTTGGGACTTTCCTCTGG | + |
Preference number: 4 (lower is better) Translates to: LTHCASAFWDMVIESRRVEHSSV*FGTFLW Trigger: CCAGAGGAAAGTCCCAAAGCAAACACTTGAATGTTC...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTGAATTCTCTGTAGAATaGTTGCTGTGTCTCATTCGC | + |
Preference number: 4 (lower is better) Translates to: CDVGPRHLFYPKSETGWTEFSVE*LLCLIR Trigger: GCGAATGAGACACAGCAACCATTCTACAGAGAATTC...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAACTCGATTTCCCGCCATaGAAACGGCCTCTTTTCTGT | + |
Preference number: 4 (lower is better) Translates to: KAEQQSILNLYTQVHSLQLDFPP*KRPLFC Trigger: ACAGAAAAGAGGCCGTTTTCATGGCGGGAAATCGAG...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTTGTCACTCTTGTTATTaGTATCCTCCCATCAAACCT | + |
Preference number: 4 (lower is better) Translates to: CDVGPRHLFYPKSETGWTCHSCY*YPPIKP Trigger: AGGTTTGATGGGAGGATATCAATAACAAGAGTGACA...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAATCGGCCGCCACCAGTTaGACATTCAAGTGTTTGCTT | + |
Preference number: 4 (lower is better) Translates to: KAEQQSILNLYTQVHSLQSAATS*TFKCLL Trigger: AAGCAAACACTTGAATGTTCAACTGGTGGCGGCCGA...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACAGACATCGGAGTCCGATaGCCTGCTTGTATAGGAATC | + |
Preference number: 4 (lower is better) Translates to: LNLYTQVHSLQLNALMRTDIGVR*PACIGI Trigger: GATTCCTATACAAGCAGGCCATCGGACTCCGATGTC...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAACCATTTCTCCCAGACTaGAGGAAGAGTTTCCACTCG | + |
Preference number: 4 (lower is better) Translates to: KAEQQSILNLYTQVHSLQPFLPD*RKSFHS Trigger: CGAGTGGAAACTCTTCCTCCAGTCTGGGAGAAATGG...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACACCATTTCTCCCAGACTaGAGGAAGAGTTTCCACTCG | + |
Preference number: 4 (lower is better) Translates to: LNLYTQVHSLQLNALMRTPFLPD*RKSFHS Trigger: CGAGTGGAAACTCTTCCTCCAGTCTGGGAGAAATGG...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGTTCAAGTGTTTGCTTTaGGACTTTCCTCTGGACTTA | + |
Preference number: 4 (lower is better) Translates to: LTHCASAFWDMVIESRRVFKCLL*DFPLDL Trigger: TAAGTCCAGAGGAAAGTCCCAAAGCAAACACTTGAA...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACAATCCAGAGATTGCTGTaGGATATGGTGAGAGGGCTG | + |
Preference number: 4 (lower is better) Translates to: LNLYTQVHSLQLNALMRTIQRLL*DMVRGL Trigger: CAGCCCTCTCACCATATCCCACAGCAATCTCTGGAT...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTTATTTCTCTTTAATGTaGAGAAAGTCCTTGGCGTCA | + |
Preference number: 4 (lower is better) Translates to: CDVGPRHLFYPKSETGWTYFSLM*RKSLAS Trigger: TGACGCCAAGGACTTTCTTCACATTAAAGAGAAATA...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACATGCTCGGAATGTTCCTaGTACCATTTCTCCCAGACT | + |
Preference number: 4 (lower is better) Translates to: LNLYTQVHSLQLNALMRTCSECS*YHFSQT Trigger: AGTCTGGGAGAAATGGTATCAGGAACATTCCGAGCA...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTCTGTGTCTCATTCGCTaGCTCTGTAATCCAGAGATT | + |
Preference number: 4 (lower is better) Translates to: STCSSRLSSQFTQIPTGILCLIR*LCNPEI Trigger: AATCTCTGGATTACAGAGTCAGCGAATGAGACACAG...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTAGGAACGTTCAATTATTaGTCTCTTGCTAGGATTGTT | + |
Preference number: 4 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVGTFNY*SLARIV Trigger: AACAATCCTAGCAAGAGAGCAATAATTGAACGTTCC...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTATCAAGAACAACCAATTaGAAAGATCTTGCCAACTCA | + |
Preference number: 4 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVSRTTN*KDLANS Trigger: TGAGTTGGCAAGATCTTTGCAATTGGTTGTTCTTGA...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACATTCGCTCTCTCAAGCTaGATAGCTGCTTGCTGTTCT | + |
Preference number: 4 (lower is better) Translates to: LNLYTQVHSLQLNALMRTFALSS*IAACCS Trigger: AGAACAGCAAGCAGCTATCCAGCTTGAGAGAGCGAA...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTCAAAAGCTACAGGTTTaGACTTCGCTCTCTCAAGCT | + |
Preference number: 4 (lower is better) Translates to: STCSSRLSSQFTQIPTGIQKLQV*TSLSQA Trigger: AGCTTGAGAGAGCGAAGTCCAAACCTGTAGCTTTTG...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAAATTCTCCAAGCGCAGTaGACTTGGGATGAAGCCAAT | + |
Preference number: 4 (lower is better) Translates to: KAEQQSILNLYTQVHSLQILQAQ*TWDEAN Trigger: ATTGGCTTCATCCCAAGTCCACTGCGCTTGGAGAAT...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTCCGCTAAGCTGGATCTaGTGTTGGAACGTTCAATTA | + |
Preference number: 4 (lower is better) Translates to: STCSSRLSSQFTQIPTGIPLSWI*CWNVQL Trigger: TAATTGAACGTTCCAACACCAGATCCAGCTTAGCGG...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACACTGTGTCTCATTCGCTaGCTCTGTAATCCAGAGATT | + |
Preference number: 4 (lower is better) Translates to: LNLYTQVHSLQLNALMRTLCLIR*LCNPEI Trigger: AATCTCTGGATTACAGAGTCAGCGAATGAGACACAG...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTGTGGTTGATGGTGTCTaGATCAAGAACAACCAATTG | + |
Preference number: 4 (lower is better) Translates to: STCSSRLSSQFTQIPTGIVVDGV*IKNNQL Trigger: CAATTGGTTGTTCTTGATGCAGACACCATCAACCAC...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAAGTTTTGCTGTTGTTGTaGGAGTTGCTCGGAATGTTC | + |
Preference number: 4 (lower is better) Translates to: KAEQQSILNLYTQVHSLQVLLLL*ELLGMF Trigger: GAACATTCCGAGCAACTCCCACAACAACAGCAAAAC...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS-3UTR CCA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAACCGCTAAGCTGGATCTaGTGTTGGAACGTTCAATTA | + |
Preference number: 4 (lower is better) Translates to: KAEQQSILNLYTQVHSLQPLSWI*CWNVQL Trigger: TAATTGAACGTTCCAACACCAGATCCAGCTTAGCGG...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTCTTTTCTGTTCCTGTTaGATCCGAATATTCTCCAAG | + |
Preference number: 4 (lower is better) Translates to: STCSSRLSSQFTQIPTGILFCSC*IRIFSK Trigger: CTTGGAGAATATTCGGATTCAACAGGAACAGAAAAG...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACAGAACATTCAAGTGTTTaGTTTGGGACTTTCCTCTGG | + |
Preference number: 4 (lower is better) Translates to: LNLYTQVHSLQLNALMRTEHSSV*FGTFLW Trigger: CCAGAGGAAAGTCCCAAAGCAAACACTTGAATGTTC...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAATTTTTCCTGTTGTTGTaGGAGTTGCTCGGAATGTTC | + |
Preference number: 4 (lower is better) Translates to: KAEQQSILNLYTQVHSLQFFLLL*ELLGMF Trigger: GAACATTCCGAGCAACTCCCACAACAACAGGAAAAA...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178799.8 |
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CDS-3UTR TCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACACTTTTCTGTTCCTGTTaGATCCGAATATTCTCCAAG | + |
Preference number: 4 (lower is better) Translates to: LNLYTQVHSLQLNALMRTLFCSC*IRIFSK Trigger: CTTGGAGAATATTCGGATTCAACAGGAACAGAAAAG...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTGGAACGTTCAATTATTaGTCTCTTGCTAGGATTGTT | + |
Preference number: 4 (lower is better) Translates to: STCSSRLSSQFTQIPTGIGTFNY*SLARIV Trigger: AACAATCCTAGCAAGAGAGCAATAATTGAACGTTCC...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACATTCAAGTGTTTGCTTTaGGACTTTCCTCTGGACTTA | + |
Preference number: 4 (lower is better) Translates to: LNLYTQVHSLQLNALMRTFKCLL*DFPLDL Trigger: TAAGTCCAGAGGAAAGTCCCAAAGCAAACACTTGAA...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CAA 72 bp | TTTACAAAGAGAGGAGGAATCTTATCTCTTCGTCATTaGAAGGAGAGAAGCTTACAGAAGGAAGATGAAAGA | + |
Preference number: 4 (lower is better) Translates to: FTKRGGILSLRH*KERSLQKEDER Trigger: TCTTTCATCTTCCTTCTGTAAGCTTCTCTCCTTCAAATGACGAAGAGATAAGATTCCTCCTCTCTTTGTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACAGGAACGTTCAATTATTaGTCTCTTGCTAGGATTGTT | + |
Preference number: 4 (lower is better) Translates to: LNLYTQVHSLQLNALMRTGTFNY*SLARIV Trigger: AACAATCCTAGCAAGAGAGCAATAATTGAACGTTCC...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR GCA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACATCAAGAACAACCAATTaGAAAGATCTTGCCAACTCA | + |
Preference number: 4 (lower is better) Translates to: LNLYTQVHSLQLNALMRTSRTTN*KDLANS Trigger: TGAGTTGGCAAGATCTTTGCAATTGGTTGTTCTTGA...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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3UTR CAA 72 bp | AATTCACCCAAATTCCAACAGGAATTGGTTTATAAATaGGTTCCAACTGGAACTGGTCATTTGGAATTTCCT | + |
Preference number: 4 (lower is better) Translates to: NSPKFQQELVYK*VPTGTGHLEFP Trigger: AGGAAATTCCAAATGACCAGTTCCAGTTGGAACCAATTTATAAACCAATTCCTGTTGGAATTTGGGTGAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS CCA 90 bp | AATCTTCTTCCACCAGAGGGTAGTGGTCTCGGCTGTGCTGGGAGCTaGAAGACAAGCGGTTCCTACTCTTGCGGGCCCTCTCATTGTGGT | + |
Preference number: 5 (lower is better) Translates to: NLLPPEGSGLGCAGS*KTSGSYSCGPSHCG Trigger: ACCACAATGAGAGGGCCCGCAAGAGTAGGAACCGCTTGTCTTCCAGCTCCCAGCACAGCCGAGACCACTACCCTCTGGTGGAAGAAGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS GCA 90 bp | CGCAAAAGCTACAGGTTTGGACTTCGCTCTCTCAAGCTGGATAGCTaGTTGCTGTTCTCGCTCTTGCCGGATCGCTTCCCGGTCCTCTTC | + |
Preference number: 5 (lower is better) Translates to: RKSYRFGLRSLKLDS*LLFSLLPDRFPVLF Trigger: GAAGAGGACCGGGAAGCGATCCGGCAAGAGCGAGAACAGCAAGCAGCTATCCAGCTTGAGAGAGCGAAGTCCAAACCTGTAGCTTTTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS GCA 90 bp | GGTCTCGGCTGTGCTGGGAGCTGGAAGACAAGCGGTTCCTACTCTTaGGGGCCCTCTCATTGTGGTAATTTTCATCCGAGGTCATTAGGC | + |
Preference number: 5 (lower is better) Translates to: GLGCAGSWKTSGSYS*GPSHCGNFHPRSLG Trigger: GCCTAATGACCTCGGATGAAAATTACCACAATGAGAGGGCCCGCAAGAGTAGGAACCGCTTGTCTTCCAGCTCCCAGCACAGCCGAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTTTGCTGTTCTCGCTCTaGCCGGATCGCTTCCCGGTC | + |
Preference number: 5 (lower is better) Translates to: RNWACLGFTLLLSNIPRILLFSL*PDRFPV Trigger: GACCGGGAAGCGATCCGGCAAGAGCGAGAACAGCAA...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS GCA 90 bp | AAAGCTACAGGTTTGGACTTCGCTCTCTCAAGCTGGATAGCTGCTTaGTGTTCTCGCTCTTGCCGGATCGCTTCCCGGTCCTCTTCCAAG | + |
Preference number: 5 (lower is better) Translates to: KATGLDFALSSWIAA*CSRSCRIASRSSSK Trigger: CTTGGAAGAGGACCGGGAAGCGATCCGGCAAGAGCGAGAACAGCAAGCAGCTATCCAGCTTGAGAGAGCGAAGTCCAAACCTGTAGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTTTGCTGTTCTCGCTCTaGCCGGATCGCTTCCCGGTC | + |
Preference number: 5 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFLLFSL*PDRFPV Trigger: GACCGGGAAGCGATCCGGCAAGAGCGAGAACAGCAA...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGACTTTCTGCTTCTGTTTaGCTGTTGTTGTGGGAGTTG | + |
Preference number: 5 (lower is better) Translates to: RPEEPCELTSCAICYQRRLSASV*LLLWEL Trigger: CAACTCCCACAACAACAGCAAAACAGAAGCAGAAAG...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS-3UTR CAA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGACTCTTGCTAGGATTGTaGAGGACAGATCTCTTAGCA | + |
Preference number: 5 (lower is better) Translates to: RPEEPCELTSCAICYQRRLLLGL*RTDLLA Trigger: TGCTAAGAGATCTGTCCTCAACAATCCTAGCAAGAG...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | AGGCCAGAGGAGCCCTGCGAGCTCACCAGCTGTGCCATCTGTTACCAAAGGAGAGCTCTCTTGCTAGGATaGTTGAGGACAGATCTCTTA | + |
Preference number: 5 (lower is better) Translates to: RPEEPCELTSCAICYQRRALLLG*LRTDLL Trigger: TAAGAGATCTGTCCTCAACAATCCTAGCAAGAGAGC...TCTCCTTTGGTAACAGATGGCACAGCTGGTGAGCTCGCAGGGCTCCTCTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTAAGCTGGATAGCTGCTaGCTGTTCTCGCTCTTGCCG | + |
Preference number: 5 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFKLDSC*LFSLLP Trigger: CGGCAAGAGCGAGAACAGCAAGCAGCTATCCAGCTT...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS CCA 90 bp | TTGTGGGAGTTGCTCGGAATGTTCCTGATACCATTTCTCCCAGACTaGAGGAAGAGTTTCCACTCGATTTCCCGCCATGAAAACGGCCTC | + |
Preference number: 5 (lower is better) Translates to: LWELLGMFLIPFLPD*RKSFHSISRHENGL Trigger: GAGGCCGTTTTCATGGCGGGAAATCGAGTGGAAACTCTTCCTCCAGTCTGGGAGAAATGGTATCAGGAACATTCCGAGCAACTCCCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCGCTTCTGTTTTGCTGTaGTTGTGGGAGTTGCTCGGA | + |
Preference number: 5 (lower is better) Translates to: IPRNWACLGFTLLLSNIPASVLL*LWELLG Trigger: TCCGAGCAACTCCCACAACAACAGCAAAACAGAAGC...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS-3UTR CAA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCACTTTCTGCTTCTGTTTaGCTGTTGTTGTGGGAGTTG | + |
Preference number: 5 (lower is better) Translates to: QNSQRFPRIRDALCVWNPLSASV*LLLWEL Trigger: CAACTCCCACAACAACAGCAAAACAGAAGCAGAAAG...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS-3UTR CAA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTATCGGCCGCCACCAGTaGAACATTCAAGTGTTTGCT | + |
Preference number: 5 (lower is better) Translates to: RNWACLGFTLLLSNIPRIIGRHQ*NIQVFA Trigger: AGCAAACACTTGAATGTTCAACTGGTGGCGGCCGAT...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCATCTGTAATCCAGAGATaGCTGTGGGATATGGTGAGA | + |
Preference number: 5 (lower is better) Translates to: QNSQRFPRIRDALCVWNPSVIQR*LWDMVR Trigger: TCTCACCATATCCCACAGCAATCTCTGGATTACAGA...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCTGTTGTTGTGGGAGTaGCTCGGAATGTTCCTGATA | + |
Preference number: 5 (lower is better) Translates to: IPRNWACLGFTLLLSNIPLLLWE*LGMFLI Trigger: TATCAGGAACATTCCGAGCAACTCCCACAACAACAG...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTATCGGCCGCCACCAGTaGAACATTCAAGTGTTTGCT | + |
Preference number: 5 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFIGRHQ*NIQVFA Trigger: AGCAAACACTTGAATGTTCAACTGGTGGCGGCCGAT...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CAGAACTCACAGCGATTTCCCCGCATCCGGGATGCCCTGTGTGTATGGAATCCAAAATTTTTCCTGTTGTaGTGGGAGTTGCTCGGAATG | + |
Preference number: 5 (lower is better) Translates to: QNSQRFPRIRDALCVWNPKFFLL*WELLGM Trigger: CATTCCGAGCAACTCCCACAACAACAGGAAAAATTT...TGGATTCCATACACACAGGGCATCCCGGATGCGGGGAAATCGCTGTGAGTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCTCTTGCTAGGATTGTaGAGGACAGATCTCTTAGCA | + |
Preference number: 5 (lower is better) Translates to: IPRNWACLGFTLLLSNIPLLLGL*RTDLLA Trigger: TGCTAAGAGATCTGTCCTCAACAATCCTAGCAAGAG...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | ATTCCCCGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCGCTCTCTTGCTAGGATaGTTGAGGACAGATCTCTTA | + |
Preference number: 5 (lower is better) Translates to: IPRNWACLGFTLLLSNIPALLLG*LRTDLL Trigger: TAAGAGATCTGTCCTCAACAATCCTAGCAAGAGAGC...GGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCGGGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTTCTGTAATCCAGAGATaGCTGTGGGATATGGTGAGA | + |
Preference number: 5 (lower is better) Translates to: RNWACLGFTLLLSNIPRISVIQR*LWDMVR Trigger: TCTCACCATATCCCACAGCAATCTCTGGATTACAGA...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTCTGTCACTCTTGTTATaGATATCCTCCCATCAAACC | + |
Preference number: 5 (lower is better) Translates to: RNWACLGFTLLLSNIPRILSLLL*ISSHQT Trigger: GGTTTGATGGGAGGATATCAATAACAAGAGTGACAG...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTTGTCAGCTGTCACTCTaGTTATTGATATCCTCCCAT | + |
Preference number: 5 (lower is better) Translates to: RNWACLGFTLLLSNIPRICQLSL*LLISSH Trigger: ATGGGAGGATATCAATAACAAGAGTGACAGCTGACA...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTGCTCTCTTGCTAGGATaGTTGAGGACAGATCTCTTA | + |
Preference number: 5 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFALLLG*LRTDLL Trigger: TAAGAGATCTGTCCTCAACAATCCTAGCAAGAGAGC...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CGGAACTGGGCGTGCTTGGGCTTCACTTTACTACTCTCAAATATCCCCCGGATTATTCAAGTGTTTGCTTaGGGACTTTCCTCTGGACTT | + |
Preference number: 5 (lower is better) Translates to: RNWACLGFTLLLSNIPRIIQVFA*GLSSGL Trigger: AAGTCCAGAGGAAAGTCCCAAAGCAAACACTTGAAT...AATCCGGGGGATATTTGAGAGTAGTAAAGTGAAGCCCAAGCACGCCCAGTTCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTAGGAAATTTTTCCTGTaGTTGTGGGAGTTGCTCGGA | + |
Preference number: 5 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFRKFFL*LWELLG Trigger: TCCGAGCAACTCCCACAACAACAGGAAAAATTTCCT...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178799.8 |
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CDS TCA 90 bp | CTGCTTCTGTTTTGCTGTTGTTGTGGGAGTTGCTCGGAATGTTCCTaGTACCATTTCTCCCAGACTGGAGGAAGAGTTTCCACTCGATTT | + |
Preference number: 5 (lower is better) Translates to: LLLFCCCCGSCSECS*YHFSQTGGRVSTRF Trigger: AAATCGAGTGGAAACTCTTCCTCCAGTCTGGGAGAAATGGTATCAGGAACATTCCGAGCAACTCCCACAACAACAGCAAAACAGAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS-3UTR CAA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACATTGCTGTTCTCGCTCTaGCCGGATCGCTTCCCGGTC | + |
Preference number: 5 (lower is better) Translates to: LNLYTQVHSLQLNALMRTLLFSL*PDRFPV Trigger: GACCGGGAAGCGATCCGGCAAGAGCGAGAACAGCAA...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTTGTCAGCTGTCACTCTaGTTATTGATATCCTCCCAT | + |
Preference number: 5 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFCQLSL*LLISSH Trigger: ATGGGAGGATATCAATAACAAGAGTGACAGCTGACA...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTAAGCTGGATCTGGTGTaGGAACGTTCAATTATTGCT | + |
Preference number: 5 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFKLDLV*ERSIIA Trigger: AGCAATAATTGAACGTTCCAACACCAGATCCAGCTT...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTATCGGCCGCCACCAGTaGAACATTCAAGTGTTTGCT | + |
Preference number: 5 (lower is better) Translates to: CDVGPRHLFYPKSETGWTIGRHQ*NIQVFA Trigger: AGCAAACACTTGAATGTTCAACTGGTGGCGGCCGAT...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTAAGCGGTTCCTACTCTaGCGGGCCCTCTCATTGTGG | + |
Preference number: 5 (lower is better) Translates to: STCSSRLSSQFTQIPTGIKRFLL*RALSLW Trigger: CCACAATGAGAGGGCCCGCAAGAGTAGGAACCGCTT...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTACTGTTGTTGTGGGAGTaGCTCGGAATGTTCCTGATA | + |
Preference number: 5 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVLLLWE*LGMFLI Trigger: TATCAGGAACATTCCGAGCAACTCCCACAACAACAG...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTTCTGTTTTGCTGTTGTaGTGGGAGTTGCTCGGAATG | + |
Preference number: 5 (lower is better) Translates to: CDVGPRHLFYPKSETGWTSVLLL*WELLGM Trigger: CATTCCGAGCAACTCCCACAACAACAGCAAAACAGA...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS-3UTR CAA 90 bp | GCTGGCAGAATGGACACTCTCACCAGGACTTTCCCCTCCAAACATAGACTGTTTTCAATTATTGCTCTCTaGCTAGGATTGTTGAGGACA | + |
Preference number: 5 (lower is better) Translates to: AGRMDTLTRTFPSKHRLFSIIAL*LGLLRT Trigger: TGTCCTCAACAATCCTAGCAAGAGAGCAATAATTGA...AAACAGTCTATGTTTGGAGGGGAAAGTCCTGGTGAGAGTGTCCATTCTGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAAAAGCGGTTCCTACTCTaGCGGGCCCTCTCATTGTGG | + |
Preference number: 5 (lower is better) Translates to: KAEQQSILNLYTQVHSLQKRFLL*RALSLW Trigger: CCACAATGAGAGGGCCCGCAAGAGTAGGAACCGCTT...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACAAAGCGGTTCCTACTCTaGCGGGCCCTCTCATTGTGG | + |
Preference number: 5 (lower is better) Translates to: LNLYTQVHSLQLNALMRTKRFLL*RALSLW Trigger: CCACAATGAGAGGGCCCGCAAGAGTAGGAACCGCTT...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS TCA 90 bp | CAAGGAAATTTTTCCTGTTGTTGTGGGAGTTGCTCGGAATGTTCCTaGTACCATTTCTCCCAGACTGGAGGAAGAGTTTCCACTCGATTT | + |
Preference number: 5 (lower is better) Translates to: QGNFSCCCGSCSECS*YHFSQTGGRVSTRF Trigger: AAATCGAGTGGAAACTCTTCCTCCAGTCTGGGAGAAATGGTATCAGGAACATTCCGAGCAACTCCCACAACAACAGGAAAAATTTCCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACAAAGCTGGATAGCTGCTaGCTGTTCTCGCTCTTGCCG | + |
Preference number: 5 (lower is better) Translates to: LNLYTQVHSLQLNALMRTKLDSC*LFSLLP Trigger: CGGCAAGAGCGAGAACAGCAAGCAGCTATCCAGCTT...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGCTCTTGCTAGGATTGTaGAGGACAGATCTCTTAGCA | + |
Preference number: 5 (lower is better) Translates to: LTHCASAFWDMVIESRRVLLLGL*RTDLLA Trigger: TGCTAAGAGATCTGTCCTCAACAATCCTAGCAAGAG...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTACTCTTGCTAGGATTGTaGAGGACAGATCTCTTAGCA | + |
Preference number: 5 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVLLLGL*RTDLLA Trigger: TGCTAAGAGATCTGTCCTCAACAATCCTAGCAAGAG...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGTCTGTAATCCAGAGATaGCTGTGGGATATGGTGAGA | + |
Preference number: 5 (lower is better) Translates to: LTHCASAFWDMVIESRRVSVIQR*LWDMVR Trigger: TCTCACCATATCCCACAGCAATCTCTGGATTACAGA...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTGCTTCTGTTTTGCTGTaGTTGTGGGAGTTGCTCGGA | + |
Preference number: 5 (lower is better) Translates to: STCSSRLSSQFTQIPTGIASVLL*LWELLG Trigger: TCCGAGCAACTCCCACAACAACAGCAAAACAGAAGC...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS-3UTR CAA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGTGTCAGCTGTCACTCTaGTTATTGATATCCTCCCAT | + |
Preference number: 5 (lower is better) Translates to: LTHCASAFWDMVIESRRVCQLSL*LLISSH Trigger: ATGGGAGGATATCAATAACAAGAGTGACAGCTGACA...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTAAGCTGGATCTGGTGTaGGAACGTTCAATTATTGCT | + |
Preference number: 5 (lower is better) Translates to: CDVGPRHLFYPKSETGWTKLDLV*ERSIIA Trigger: AGCAATAATTGAACGTTCCAACACCAGATCCAGCTT...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGAAGCTGGATCTGGTGTaGGAACGTTCAATTATTGCT | + |
Preference number: 5 (lower is better) Translates to: LTHCASAFWDMVIESRRVKLDLV*ERSIIA Trigger: AGCAATAATTGAACGTTCCAACACCAGATCCAGCTT...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTAAAGCTGGATCTGGTGTaGGAACGTTCAATTATTGCT | + |
Preference number: 5 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVKLDLV*ERSIIA Trigger: AGCAATAATTGAACGTTCCAACACCAGATCCAGCTT...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGATTCAAGTGTTTGCTTaGGGACTTTCCTCTGGACTT | + |
Preference number: 5 (lower is better) Translates to: LTHCASAFWDMVIESRRVIQVFA*GLSSGL Trigger: AAGTCCAGAGGAAAGTCCCAAAGCAAACACTTGAAT...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTCTGTTGTTGTGGGAGTaGCTCGGAATGTTCCTGATA | + |
Preference number: 5 (lower is better) Translates to: STCSSRLSSQFTQIPTGILLLWE*LGMFLI Trigger: TATCAGGAACATTCCGAGCAACTCCCACAACAACAG...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTTCTGTTTTGCTGTTGTaGTGGGAGTTGCTCGGAATG | + |
Preference number: 5 (lower is better) Translates to: STCSSRLSSQFTQIPTGISVLLL*WELLGM Trigger: CATTCCGAGCAACTCCCACAACAACAGCAAAACAGA...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS-3UTR CAA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAAGCTTCTGTTTTGCTGTaGTTGTGGGAGTTGCTCGGA | + |
Preference number: 5 (lower is better) Translates to: KAEQQSILNLYTQVHSLQASVLL*LWELLG Trigger: TCCGAGCAACTCCCACAACAACAGCAAAACAGAAGC...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS-3UTR CAA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTATCAATTATTGCTCTCTaGCTAGGATTGTTGAGGACA | + |
Preference number: 5 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVSIIAL*LGLLRT Trigger: TGTCCTCAACAATCCTAGCAAGAGAGCAATAATTGA...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTTCAATTATTGCTCTCTaGCTAGGATTGTTGAGGACA | + |
Preference number: 5 (lower is better) Translates to: CDVGPRHLFYPKSETGWTSIIAL*LGLLRT Trigger: TGTCCTCAACAATCCTAGCAAGAGAGCAATAATTGA...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACAATCGGCCGCCACCAGTaGAACATTCAAGTGTTTGCT | + |
Preference number: 5 (lower is better) Translates to: LNLYTQVHSLQLNALMRTIGRHQ*NIQVFA Trigger: AGCAAACACTTGAATGTTCAACTGGTGGCGGCCGAT...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CTGACACACTGTGCCTCAGCATTTTGGGATATGGTCATTGAAAGTAGAAGAGTGTCTTTTCTGTTCCTGTaGAATCCGAATATTCTCCAA | + |
Preference number: 5 (lower is better) Translates to: LTHCASAFWDMVIESRRVSFLFL*NPNILQ Trigger: TTGGAGAATATTCGGATTCAACAGGAACAGAAAAGA...CACTCTTCTACTTTCAATGACCATATCCCAAAATGCTGAGGCACAGTGTGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | TGTGATGTAGGGCCAAGACATTTATTCTATCCAAAGTCAGAGACTGGCTGGACTTCTTTTCTGTTCCTGTaGAATCCGAATATTCTCCAA | + |
Preference number: 5 (lower is better) Translates to: CDVGPRHLFYPKSETGWTSFLFL*NPNILQ Trigger: TTGGAGAATATTCGGATTCAACAGGAACAGAAAAGA...AGTCCAGCCAGTCTCTGACTTTGGATAGAATAAATGTCTTGGCCCTACATCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | GGGATGCCCTGTGTGTATGGAATCCACACTGATTTCCATGAAGTGTATGTAGTATCTTTTCTGTTCCTGTaGAATCCGAATATTCTCCAA | + |
Preference number: 5 (lower is better) Translates to: GMPCVYGIHTDFHEVYVVSFLFL*NPNILQ Trigger: TTGGAGAATATTCGGATTCAACAGGAACAGAAAAGA...TACTACATACACTTCATGGAAATCAGTGTGGATTCCATACACACAGGGCATCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACACTGTTGTTGTGGGAGTaGCTCGGAATGTTCCTGATA | + |
Preference number: 5 (lower is better) Translates to: LNLYTQVHSLQLNALMRTLLLWE*LGMFLI Trigger: TATCAGGAACATTCCGAGCAACTCCCACAACAACAG...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTGCTCTCTTGCTAGGATaGTTGAGGACAGATCTCTTA | + |
Preference number: 5 (lower is better) Translates to: STCSSRLSSQFTQIPTGIALLLG*LRTDLL Trigger: TAAGAGATCTGTCCTCAACAATCCTAGCAAGAGAGC...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAACTTTCTGCTTCTGTTTaGCTGTTGTTGTGGGAGTTG | + |
Preference number: 5 (lower is better) Translates to: KAEQQSILNLYTQVHSLQLSASV*LLLWEL Trigger: CAACTCCCACAACAACAGCAAAACAGAAGCAGAAAG...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS-3UTR CAA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTCTGTCACTCTTGTTATaGATATCCTCCCATCAAACC | + |
Preference number: 5 (lower is better) Translates to: STCSSRLSSQFTQIPTGILSLLL*ISSHQT Trigger: GGTTTGATGGGAGGATATCAATAACAAGAGTGACAG...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAATCTGTAATCCAGAGATaGCTGTGGGATATGGTGAGA | + |
Preference number: 5 (lower is better) Translates to: KAEQQSILNLYTQVHSLQSVIQR*LWDMVR Trigger: TCTCACCATATCCCACAGCAATCTCTGGATTACAGA...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACACTGTCACTCTTGTTATaGATATCCTCCCATCAAACC | + |
Preference number: 5 (lower is better) Translates to: LNLYTQVHSLQLNALMRTLSLLL*ISSHQT Trigger: GGTTTGATGGGAGGATATCAATAACAAGAGTGACAG...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAATGTCAGCTGTCACTCTaGTTATTGATATCCTCCCAT | + |
Preference number: 5 (lower is better) Translates to: KAEQQSILNLYTQVHSLQCQLSL*LLISSH Trigger: ATGGGAGGATATCAATAACAAGAGTGACAGCTGACA...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | AAAGCTGAACAGCAATCTATTCTAAATTTATACACCCAAGTGCACTCTCTGCAAATTCAAGTGTTTGCTTaGGGACTTTCCTCTGGACTT | + |
Preference number: 5 (lower is better) Translates to: KAEQQSILNLYTQVHSLQIQVFA*GLSSGL Trigger: AAGTCCAGAGGAAAGTCCCAAAGCAAACACTTGAAT...TTGCAGAGAGTGCACTTGGGTGTATAAATTTAGAATAGATTGCTGTTCAGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | TCAACATGCTCTAGTAGACTTTCCAGTCAATTCACCCAAATTCCAACAGGAATTTCTTTTCTGTTCCTGTaGAATCCGAATATTCTCCAA | + |
Preference number: 5 (lower is better) Translates to: STCSSRLSSQFTQIPTGISFLFL*NPNILQ Trigger: TTGGAGAATATTCGGATTCAACAGGAACAGAAAAGA...AATTCCTGTTGGAATTTGGGTGAATTGACTGGAAAGTCTACTAGAGCATGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS-3UTR CAA 90 bp | CTAAATTTATACACCCAAGTGCACTCTCTGCAATTAAATGCTTTAATGCGCACATCAATTATTGCTCTCTaGCTAGGATTGTTGAGGACA | + |
Preference number: 5 (lower is better) Translates to: LNLYTQVHSLQLNALMRTSIIAL*LGLLRT Trigger: TGTCCTCAACAATCCTAGCAAGAGAGCAATAATTGA...TGTGCGCATTAAAGCATTTAATTGCAGAGAGTGCACTTGGGTGTATAAATTTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS CCA 72 bp | CCACCAGAGGGTAGTGGTCTCGGCTGTGCTGGGAGCTaGAAGACAAGCGGTTCCTACTCTTGCGGGCCCTCT | + |
Preference number: 6 (lower is better) Translates to: PPEGSGLGCAGS*KTSGSYSCGPS Trigger: AGAGGGCCCGCAAGAGTAGGAACCGCTTGTCTTCCAGCTCCCAGCACAGCCGAGACCACTACCCTCTGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS GCA 72 bp | GGTTTGGACTTCGCTCTCTCAAGCTGGATAGCTGCTTaGTGTTCTCGCTCTTGCCGGATCGCTTCCCGGTCC | + |
Preference number: 6 (lower is better) Translates to: GLDFALSSWIAA*CSRSCRIASRS Trigger: GGACCGGGAAGCGATCCGGCAAGAGCGAGAACAGCAAGCAGCTATCCAGCTTGAGAGAGCGAAGTCCAAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS GCA 72 bp | CTCTCAAGCTGGATAGCTGCTTGCTGTTCTCGCTCTTaGCGGATCGCTTCCCGGTCCTCTTCCAAGGAGACA | + |
Preference number: 6 (lower is better) Translates to: LSSWIAACCSRS*RIASRSSSKET Trigger: TGTCTCCTTGGAAGAGGACCGGGAAGCGATCCGGCAAGAGCGAGAACAGCAAGCAGCTATCCAGCTTGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS GCA 72 bp | GGTCCTCTTCCAAGGAGACATCGGAGTCCGATGGCCTaGTTGTATAGGAATCTGCTGACCCAGCCTCCGAGT | + |
Preference number: 6 (lower is better) Translates to: GPLPRRHRSPMA*LYRNLLTQPPS Trigger: ACTCGGAGGCTGGGTCAGCAGATTCCTATACAAGCAGGCCATCGGACTCCGATGTCTCCTTGGAAGAGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102760.10 |
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CDS CAA 72 bp | TCTCTCAAGCTGGATAGCTGCTTGCTGTTCTCGCTCTaGCCGGATCGCTTCCCGGTCCTCTTCCAAGGAGAC | + |
Preference number: 6 (lower is better) Translates to: SLKLDSCLLFSL*PDRFPVLFQGD Trigger: GTCTCCTTGGAAGAGGACCGGGAAGCGATCCGGCAAGAGCGAGAACAGCAAGCAGCTATCCAGCTTGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS CAA 72 bp | AGGTTTGGACTTCGCTCTCTCAAGCTGGATAGCTGCTaGCTGTTCTCGCTCTTGCCGGATCGCTTCCCGGTC | + |
Preference number: 6 (lower is better) Translates to: RFGLRSLKLDSC*LFSLLPDRFPV Trigger: GACCGGGAAGCGATCCGGCAAGAGCGAGAACAGCAAGCAGCTATCCAGCTTGAGAGAGCGAAGTCCAAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS GCA 72 bp | TACAGGTTTGGACTTCGCTCTCTCAAGCTGGATAGCTaGTTGCTGTTCTCGCTCTTGCCGGATCGCTTCCCG | + |
Preference number: 6 (lower is better) Translates to: YRFGLRSLKLDS*LLFSLLPDRFP Trigger: CGGGAAGCGATCCGGCAAGAGCGAGAACAGCAAGCAGCTATCCAGCTTGAGAGAGCGAAGTCCAAACCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS CAA 72 bp | CCTCTTCCAAGGAGACATCGGAGTCCGATGGCCTGCTaGTATAGGAATCTGCTGACCCAGCCTCCGAGTCTT | + |
Preference number: 6 (lower is better) Translates to: PLPRRHRSPMAC*YRNLLTQPPSL Trigger: AAGACTCGGAGGCTGGGTCAGCAGATTCCTATACAAGCAGGCCATCGGACTCCGATGTCTCCTTGGAAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102760.10 |
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CDS GCA 72 bp | TGTGCTGGGAGCTGGAAGACAAGCGGTTCCTACTCTTaGGGGCCCTCTCATTGTGGTAATTTTCATCCGAGG | + |
Preference number: 6 (lower is better) Translates to: CAGSWKTSGSYS*GPSHCGNFHPR Trigger: CCTCGGATGAAAATTACCACAATGAGAGGGCCCGCAAGAGTAGGAACCGCTTGTCTTCCAGCTCCCAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS CCA 72 bp | GTCTCATTCGCTGACTCTGTAATCCAGAGATTGCTGTaGGATATGGTGAGAGGGCTGTGGAGCCCACGTTCC | + |
Preference number: 6 (lower is better) Translates to: VSFADSVIQRLL*DMVRGLWSPRS Trigger: GGAACGTGGGCTCCACAGCCCTCTCACCATATCCCACAGCAATCTCTGGATTACAGAGTCAGCGAATGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS CAA 90 bp | AAAAGCTACAGGTTTGGACTTCGCTCTCTCAAGCTGGATAGCTGCTaGCTGTTCTCGCTCTTGCCGGATCGCTTCCCGGTCCTCTTCCAA | + |
Preference number: 6 (lower is better) Translates to: KSYRFGLRSLKLDSC*LFSLLPDRFPVLFQ Trigger: TTGGAAGAGGACCGGGAAGCGATCCGGCAAGAGCGAGAACAGCAAGCAGCTATCCAGCTTGAGAGAGCGAAGTCCAAACCTGTAGCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS CCA 72 bp | GCAAAAGCTACAGGTTTGGACTTCGCTCTCTCAAGCTaGATAGCTGCTTGCTGTTCTCGCTCTTGCCGGATC | + |
Preference number: 6 (lower is better) Translates to: AKATGLDFALSS*IAACCSRSCRI Trigger: GATCCGGCAAGAGCGAGAACAGCAAGCAGCTATCCAGCTTGAGAGAGCGAAGTCCAAACCTGTAGCTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS CAA 90 bp | TCCACTCGATTTCCCGCCATGAAAACGGCCTCTTTTCTGTTCCTGTaGAATCCGAATATTCTCCAAGCGCAGTGGACTTGGGATGAAGCC | + |
Preference number: 6 (lower is better) Translates to: STRFPAMKTASFLFL*NPNILQAQWTWDEA Trigger: GGCTTCATCCCAAGTCCACTGCGCTTGGAGAATATTCGGATTCAACAGGAACAGAAAAGAGGCCGTTTTCATGGCGGGAAATCGAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS GCA 72 bp | GGACGCATTGACGGCACGACGTCATACGGAGGAATGTaGTCCGTAACGAGCAAGGAAATTTTTCCTGTTGTT | + |
Preference number: 6 (lower is better) Translates to: GRIDGTTSYGGM*SVTSKEIFPVV Trigger: AACAACAGGAAAAATTTCCTTGCTCGTTACGGAGCACATTCCTCCGTATGACGTCGTGCCGTCAATGCGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178799.8 |
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CDS CAA 72 bp | ACGGAGGAATGTGCTCCGTCACTTTCTGCTTCTGTTTaGCTGTTGTTGTGGGAGTTGCTCGGAATGTTCCTG | + |
Preference number: 6 (lower is better) Translates to: TEECAPSLSASV*LLLWELLGMFL Trigger: CAGGAACATTCCGAGCAACTCCCACAACAACAGCAAAACAGAAGCAGAAAGTGACGGAGCACATTCCTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS CCA 72 bp | TTGCTCGGAATGTTCCTGATACCATTTCTCCCAGACTaGAGGAAGAGTTTCCACTCGATTTCCCGCCATGAA | + |
Preference number: 6 (lower is better) Translates to: LLGMFLIPFLPD*RKSFHSISRHE Trigger: TTCATGGCGGGAAATCGAGTGGAAACTCTTCCTCCAGTCTGGGAGAAATGGTATCAGGAACATTCCGAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS CAA 72 bp | TTTCCCGCCATGAAAACGGCCTCTTTTCTGTTCCTGTaGAATCCGAATATTCTCCAAGCGCAGTGGACTTGG | + |
Preference number: 6 (lower is better) Translates to: FPAMKTASFLFL*NPNILQAQWTW Trigger: CCAAGTCCACTGCGCTTGGAGAATATTCGGATTCAACAGGAACAGAAAAGAGGCCGTTTTCATGGCGGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS CAA 90 bp | CGACGTCATACGGAGGAATGTGCTCCGTCACTTTCTGCTTCTGTTTaGCTGTTGTTGTGGGAGTTGCTCGGAATGTTCCTGATACCATTT | + |
Preference number: 6 (lower is better) Translates to: RRHTEECAPSLSASV*LLLWELLGMFLIPF Trigger: AAATGGTATCAGGAACATTCCGAGCAACTCCCACAACAACAGCAAAACAGAAGCAGAAAGTGACGGAGCACATTCCTCCGTATGACGTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS TCA 72 bp | TTTTGCTGTTGTTGTGGGAGTTGCTCGGAATGTTCCTaGTACCATTTCTCCCAGACTGGAGGAAGAGTTTCC | + |
Preference number: 6 (lower is better) Translates to: FCCCCGSCSECS*YHFSQTGGRVS Trigger: GGAAACTCTTCCTCCAGTCTGGGAGAAATGGTATCAGGAACATTCCGAGCAACTCCCACAACAACAGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 |
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CDS TCA 72 bp | TTTTCCTGTTGTTGTGGGAGTTGCTCGGAATGTTCCTaGTACCATTTCTCCCAGACTGGAGGAAGAGTTTCC | + |
Preference number: 6 (lower is better) Translates to: FSCCCGSCSECS*YHFSQTGGRVS Trigger: GGAAACTCTTCCTCCAGTCTGGGAGAAATGGTATCAGGAACATTCCGAGCAACTCCCACAACAACAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178799.8 |
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CDS CAA 90 bp | CTGGATCTGGTGTTGGAACGTTCAATTATTGCTCTCTTGCTAGGATaGTTGAGGACAGATCTCTTAGCAAGAGAAATGTCAGCTGTCACT | + |
Preference number: 6 (lower is better) Translates to: LDLVLERSIIALLLG*LRTDLLAREMSAVT Trigger: AGTGACAGCTGACATTTCTCTTGCTAAGAGATCTGTCCTCAACAATCCTAGCAAGAGAGCAATAATTGAACGTTCCAACACCAGATCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS CAA 72 bp | ATTTCACTTTGTACTTCCGCTAAGCTGGATCTGGTGTaGGAACGTTCAATTATTGCTCTCTTGCTAGGATTG | + |
Preference number: 6 (lower is better) Translates to: ISLCTSAKLDLV*ERSIIALLLGL Trigger: CAATCCTAGCAAGAGAGCAATAATTGAACGTTCCAACACCAGATCCAGCTTAGCGGAAGTACAAAGTGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS CAA 72 bp | GTGTTGGAACGTTCAATTATTGCTCTCTTGCTAGGATaGTTGAGGACAGATCTCTTAGCAAGAGAAATGTCA | + |
Preference number: 6 (lower is better) Translates to: VLERSIIALLLG*LRTDLLAREMS Trigger: TGACATTTCTCTTGCTAAGAGATCTGTCCTCAACAATCCTAGCAAGAGAGCAATAATTGAACGTTCCAACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |
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CDS CAA 72 bp | TGGTGTCTGCATCAAGAACAACCAATTGCAAAGATCTaGCCAACTCAAAAATTCTTTCAATTTCACTTTGTA | + |
Preference number: 6 (lower is better) Translates to: WCLHQEQPIAKI*PTQKFFQFHFV Trigger: TACAAAGTGAAATTGAAAGAATTTTTGAGTTGGCAAGATCTTTGCAATTGGTTGTTCTTGATGCAGACACCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078324.7 ENSMUST00000102760.10 ENSMUST00000102761.9 ENSMUST00000178799.8 |