Pregenerated sensors for CACNB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003352Ensembl transcript IDs: ENSMUST00000003442.9, ENSMUST00000109150.9, ENSMUST00000230490.2
Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAAGCTGTCCCACCCTCCCCCGCAGTCCAGGCTGGCTCTTGGCTTaGATATGCCCCAGTTCCCTAGTCTCACCAGATGCTAAGCGTCCC | + |
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Preference number: 1 (lower is better) Translates to: GSCPTLPRSPGWLLA*ICPSSLVSPDAKRP Trigger: GGGACGCTTAGCATCTGGTGAGACTAGGGAACTGGGGCATATTCAAGCCAAGAGCCAGCCTGGACTGCGGGGGAGGGTGGGACAGCTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR GCA 90 bp | CTGTCTGTCCTGCCTCACCCGCACTGCTCCTGTCTTAGGTGTAAGTaGCCACCCCAGCTGATGGGACAGAAGTGCCGCCATGTTGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: LSVLPHPHCSCLRCK*PPQLMGQKCRHVEL Trigger: GAGCTCAACATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGAGCAGTGCGGGTGAGGCAGGACAGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR GCA 90 bp | AGCAGAGCTACAGCTGTGAGTCTGTCTGTCCTGCCTCACCCGCACTaGTCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAG | + |
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Preference number: 1 (lower is better) Translates to: SRATAVSLSVLPHPH*SCLRCKCPPQLMGQ Trigger: CTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGAGCAGTGCGGGTGAGGCAGGACAGACAGACTCACAGCTGTAGCTCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR TCA 90 bp | TCGGGGACTGTTCACTGTGTCCTGTTCCTCTCATCTAACCCTAACTaGAGTGGCTGCTATGAGTCAGGAAGCCCCTATCTTGCAGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: SGTVHCVLFLSSNPN*SGCYESGSPYLAGA Trigger: GGCTCCTGCAAGATAGGGGCTTCCTGACTCATAGCAGCCACTTCAGTTAGGGTTAGATGAGAGGAACAGGACACAGTGAACAGTCCCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR CCA 90 bp | GAAGTGGCTGCTATGAGTCAGGAAGCCCCTATCTTGCAGGAGCCATaGAGGGAAAGGACAGAAATGACAGATGCAAGGGCAAAGAATGAG | + |
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Preference number: 1 (lower is better) Translates to: EVAAMSQEAPILQEP*RERTEMTDARAKNE Trigger: CTCATTCTTTGCCCTTGCATCTGTCATTTCTGTCCTTTCCCTCCATGGCTCCTGCAAGATAGGGGCTTCCTGACTCATAGCAGCCACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTGCCCTACGGGGTCACTGTaGCCAGGAGGTGAGGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: SWPEIVAHGGGSLCRGRCPTGSL*PGGEGP Trigger: GGGCCCCTCACCTCCTGGGCACAGTGACCCCGTAGG...GCACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTGCCCCTGGACCTGGGGCTaGGCAGAGGGTTGTGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: SWPEIVAHGGGSLCRGRCPWTWG*AEGCVS Trigger: GCTCACACAACCCTCTGCCCAGCCCCAGGTCCAGGG...GCACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTGCCTTCTCCCAGAACCTTaGGACCACAGTCAGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SWPEIVAHGGGSLCRGRCLLPEP*DHSQPW Trigger: CCAGGGCTGACTGTGGTCCCAAGGTTCTGGGAGAAG...GCACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATACTGTGCCCAGGAGGTaGGGGGCCCCTTGCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SCLRCKCPPQLMGQKCRHTVPRR*GAPCFS Trigger: GGAGAAGCAAGGGGCCCCTCACCTCCTGGGCACAGT...ATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGTGGGGCGGGTTCTTAATGGAGCATGCTCTGTAGGTCACACGCTAGAGCCAACTGTGCCCAGGAGGTaGGGGGCCCCTTGCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: EVGRVLNGACSVGHTLEPTVPRR*GAPCFS Trigger: GGAGAAGCAAGGGGCCCCTCACCTCCTGGGCACAGT...TGGCTCTAGCGTGTGACCTACAGAGCATGCTCCATTAAGAACCCGCCCCACCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTGCAATCTAACTCCAACCTaGCTGAGGTGGACACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SWPEIVAHGGGSLCRGRCNLTPT*LRWTPQ Trigger: CTGGGGTGTCCACCTCAGGCAGGTTGGAGTTAGATT...GCACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGACTGTGCCCAGGAGGTaGGGGGCCCCTTGCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: ASILAGRPLLSDPGLRLLTVPRR*GAPCFS Trigger: GGAGAAGCAAGGGGCCCCTCACCTCCTGGGCACAGT...CAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR GCA 90 bp | CTTAGGAACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCCCTACGGGGTCACTGTaGCCAGGAGGTGAGGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: LRNRVSSSSGYVAHTHTLPTGSL*PGGEGP Trigger: GGGCCCCTCACCTCCTGGGCACAGTGACCCCGTAGG...GAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTTCCTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAGGAACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCCCCTGGACCTGGGGCTaGGCAGAGGGTTGTGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LRNRVSSSSGYVAHTHTLPWTWG*AEGCVS Trigger: GCTCACACAACCCTCTGCCCAGCCCCAGGTCCAGGG...GAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTTCCTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCCCACGCTTCTCCCAGAACCTTaGGACCACAGTCAGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ILAGRPLLSDPGLRLLPTLLPEP*DHSQPW Trigger: CCAGGGCTGACTGTGGTCCCAAGGTTCTGGGAGAAG...CGTGGGCAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR CAA 90 bp | ATATGCCCCAGTTCCCTAGTCTCACCAGATGCTAAGCGTCCCGGTTaGGTGAGTGGGCCGTTTTCTAGCAGAGCTACAGCTGTGAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: ICPSSLVSPDAKRPG*VSGPFSSRATAVSL Trigger: CAGACTCACAGCTGTAGCTCTGCTAGAAAACGGCCCACTCACCAAACCGGGACGCTTAGCATCTGGTGAGACTAGGGAACTGGGGCATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGCTTCTCCCAGAACCTTaGGACCACAGTCAGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SSSSGYVAHTHTLLLFRGLLPEP*DHSQPW Trigger: CCAGGGCTGACTGTGGTCCCAAGGTTCTGGGAGAAG...CCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR GCA 90 bp | AACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTGCTCAATCTAACTCCAACCTaGCTGAGGTGGACACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: NRVSSSSGYVAHTHTLLLNLTPT*LRWTPQ Trigger: CTGGGGTGTCCACCTCAGGCAGGTTGGAGTTAGATT...GAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR CAA 90 bp | ATCTACGCCTGCTTAGGAACCGAGTTTCTTCTTCCTCAGGCTATGTaGCCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTC | + |
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Preference number: 2 (lower is better) Translates to: IYACLGTEFLLPQAM*PTLTPSCSLEGHPF Trigger: GAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTTCCTAAGCAGGCGTAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR CAA 90 bp | CTAACCCTAACTGAAGTGGCTGCTATGAGTCAGGAAGCCCCTATCTaGCAGGAGCCATGGAGGGAAAGGACAGAAATGACAGATGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LTLTEVAAMSQEAPI*QEPWRERTEMTDAR Trigger: CCTTGCATCTGTCATTTCTGTCCTTTCCCTCCATGGCTCCTGCAAGATAGGGGCTTCCTGACTCATAGCAGCCACTTCAGTTAGGGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAGTGCCGCCATGTTGAGCTCTGATTGCTTCATTTCTGATGTGTGGCAGTGGAATCTAACTCCAACCTaGCTGAGGTGGACACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: RSAAMLSSDCFISDVWQWNLTPT*LRWTPQ Trigger: CTGGGGTGTCCACCTCAGGCAGGTTGGAGTTAGATT...CCACTGCCACACATCAGAAATGAAGCAATCAGAGCTCAACATGGCGGCACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGTCCTGTTCCTCTCATCTAACCCTAACTGAAGTGGCTGCTATGAGTCAGTGTCTTAGGTGTAAGTaGCCACCCCAGCTGATGGGA | + |
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Preference number: 2 (lower is better) Translates to: TVSCSSHLTLTEVAAMSQCLRCK*PPQLMG Trigger: TCCCATCAGCTGGGGTGGGCACTTACACCTAAGACA...CTGACTCATAGCAGCCACTTCAGTTAGGGTTAGATGAGAGGAACAGGACACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTGTCCTGTTCCTCTCATCTAACCCTAACTGAAGTGGCTGCTATGAGTCAGGGGAAAGGACAGAAATaGCAGATGCAAGGGCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: TVSCSSHLTLTEVAAMSQGKGQK*QMQGQR Trigger: TCTTTGCCCTTGCATCTGTCATTTCTGTCCTTTCCC...CTGACTCATAGCAGCCACTTCAGTTAGGGTTAGATGAGAGGAACAGGACACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR CCA 72 bp | CAGCCTAATGCCAATCTAACTCCAACCTGCCTGAGGTaGACACCCCAGCCGCTGTGCCTGCGCCTGCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: QPNANLTPTCLR*TPQPLCLRLPG Trigger: CCCTGGCAGGCGCAGGCACAGCGGCTGGGGTGTCCACCTCAGGCAGGTTGGAGTTAGATTGGCATTAGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR TCA 72 bp | CCCACCCTCCCCCGCAGTCCAGGCTGGCTCTTGGCTTaGATATGCCCCAGTTCCCTAGTCTCACCAGATGCT | + |
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Preference number: 3 (lower is better) Translates to: PTLPRSPGWLLA*ICPSSLVSPDA Trigger: AGCATCTGGTGAGACTAGGGAACTGGGGCATATTCAAGCCAAGAGCCAGCCTGGACTGCGGGGGAGGGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR GCA 72 bp | CTGCCTCACCCGCACTGCTCCTGTCTTAGGTGTAAGTaGCCACCCCAGCTGATGGGACAGAAGTGCCGCCAT | + |
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Preference number: 3 (lower is better) Translates to: LPHPHCSCLRCK*PPQLMGQKCRH Trigger: ATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGAGCAGTGCGGGTGAGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR CAA 90 bp | CCGCACTGCTCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGGGGCTGGGCAGAGGGTaGTGTGAGCTGAACCTAACG | + |
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Preference number: 3 (lower is better) Translates to: PHCSCLRCKCPPQLMGQKGLGRG*CELNLT Trigger: CGTTAGGTTCAGCTCACACAACCCTCTGCCCAGCCC...CTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGAGCAGTGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR TCA 72 bp | AGGTGCCAAGGATGCAGAACACGGCTAGTACCCGGATaGGAACCTACGGGGTCACTGTGCCCAGGAGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: RCQGCRTRLVPG*EPTGSLCPGGE Trigger: CTCACCTCCTGGGCACAGTGACCCCGTAGGTTCTCATCCGGGTACTAGCCGTGTTCTGCATCCTTGGCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATGGGCTGGGCAGAGGGTaGTGTGAGCTGAACCTAACG | + |
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Preference number: 3 (lower is better) Translates to: SCLRCKCPPQLMGQKCRHGLGRG*CELNLT Trigger: CGTTAGGTTCAGCTCACACAACCCTCTGCCCAGCCC...ATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGTGGGGCGGGTTCTTAATGGAGCATGCTCTGTAGGTCACACGCTAGAGCCACAGGAAGCCCCTATCTaGCAGGAGCCATGGAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: EVGRVLNGACSVGHTLEPQEAPI*QEPWRE Trigger: TTCCCTCCATGGCTCCTGCAAGATAGGGGCTTCCTG...TGGCTCTAGCGTGTGACCTACAGAGCATGCTCCATTAAGAACCCGCCCCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR CAA 90 bp | TATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGGCTGGGCAGAGGGTaGTGTGAGCTGAACCTAACG | + |
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Preference number: 3 (lower is better) Translates to: YVAHTHTLLLFRGASILAGLGRG*CELNLT Trigger: CGTTAGGTTCAGCTCACACAACCCTCTGCCCAGCCC...AGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGTGTCCTGTTCCTCTCATCTAACCCTAACTGAAGTGGCTGCTATGAGTCAGGATCCTGGCCTGAGATaGTTGCCCACGGGGGCGGCA | + |
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Preference number: 3 (lower is better) Translates to: TVSCSSHLTLTEVAAMSQDPGLR*LPTGAA Trigger: TGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGATC...CTGACTCATAGCAGCCACTTCAGTTAGGGTTAGATGAGAGGAACAGGACACAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR GCA 72 bp | CTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTaGTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: LPQAMLPTLTPS*SLEGHPFWLEG Trigger: GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR TCA 72 bp | CCCACCCCAGCTGATGGGACAGAAGTGCCGCCATGTTaGGCTCTGATTGCTTCATTTCTGATGTGTGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: PTPADGTEVPPC*ALIASFLMCGS Trigger: ACTGCCACACATCAGAAATGAAGCAATCAGAGCTCAACATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR TCA 72 bp | GTTCACTGTGTCCTGTTCCTCTCATCTAACCCTAACTaGAGTGGCTGCTATGAGTCAGGAAGCCCCTATCTT | + |
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Preference number: 3 (lower is better) Translates to: VHCVLFLSSNPN*SGCYESGSPYL Trigger: AAGATAGGGGCTTCCTGACTCATAGCAGCCACTTCAGTTAGGGTTAGATGAGAGGAACAGGACACAGTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR TCA 90 bp | GAGGTGGACACCCCAGCCGCTGTGCCTGCGCCTGCCAGGGTGGGGCAGGAGGTGGTTGGGGGCTGGGGATaGAGGCGATGTCTCCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: EVDTPAAVPAPARVGQEVVGGWG*RRCLRP Trigger: AGGGCGGAGACATCGCCTTCATCCCCAGCCCCCAAC...CACCTCCTGCCCCACCCTGGCAGGCGCAGGCACAGCGGCTGGGGTGTCCACCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR GCA 90 bp | GAGGTGGACACCCCAGCCGCTGTGCCTGCGCCTGCCAGGGTGGGGCAGGAGGTGCGGTCTTGGGGGTCGTaGCCGTTAGCACTGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: EVDTPAAVPAPARVGQEVRSWGS*PLALGS Trigger: GCTGCCCAGTGCTAACGGGCACGACCCCCAAGACCG...CACCTCCTGCCCCACCCTGGCAGGCGCAGGCACAGCGGCTGGGGTGTCCACCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR TCA 90 bp | TCCAACCTGCCTGAGGTGGACACCCCAGCCGCTGTGCCTGCGCCTGCCAGGGTGCTCCAGGGAGACGTCTaGGTCCAGAGAGGGGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SNLPEVDTPAAVPAPARVLQGDV*VQRGAA Trigger: AGCCGCCCCTCTCTGGACTCAGACGTCTCCCTGGAG...CACCCTGGCAGGCGCAGGCACAGCGGCTGGGGTGTCCACCTCAGGCAGGTTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR GCA 90 bp | TCCAACCTGCCTGAGGTGGACACCCCAGCCGCTGTGCCTGCGCCTGCCAGGGTGCTCTCCAGGGGTGAGTaGTCCTCCACTCGCTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: SNLPEVDTPAAVPAPARVLSRGE*SSTRSP Trigger: GGGGGAGCGAGTGGAGGAGCACTCACCCCTGGAGAG...CACCCTGGCAGGCGCAGGCACAGCGGCTGGGGTGTCCACCTCAGGCAGGTTGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR GCA 90 bp | GAGGTGGACACCCCAGCCGCTGTGCCTGCGCCTGCCAGGGTGGGGCAGGAGGTGCAAGGCCGGTTACGCTaGCAGTTCCGGTCATTGTGG | + |
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Preference number: 4 (lower is better) Translates to: EVDTPAAVPAPARVGQEVQGRLR*QFRSLW Trigger: CCACAATGACCGGAACTGGCAGCGTAACCGGCCTTG...CACCTCCTGCCCCACCCTGGCAGGCGCAGGCACAGCGGCTGGGGTGTCCACCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CCA 90 bp | TCCAACCTGCCTGAGGTGGACACCCCAGCCGCTGTGCCTGCGCCTGCCAGGGTGTCATGCTCCGAGTCCTaGGCTAGGAGCCGGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SNLPEVDTPAAVPAPARVSCSES*ARSRSW Trigger: CCAAGACCGGCTCCTAGCCCAGGACTCGGAGCATGA...CACCCTGGCAGGCGCAGGCACAGCGGCTGGGGTGTCCACCTCAGGCAGGTTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR TCA 90 bp | GATCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTCTCCAGGGAGACGTCTaGGTCCAGAGAGGGGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: DPGLRLLPTGAAAYAGGGLQGDV*VQRGAA Trigger: AGCCGCCCCTCTCTGGACTCAGACGTCTCCCTGGAG...ACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGATC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR TCA 90 bp | TCCAACCTGCCTGAGGTGGACACCCCAGCCGCTGTGCCTGCGCCTGCCAGGGTGCCTTCTGTTCCTGTTTaGGCCGGATGCTCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SNLPEVDTPAAVPAPARVPSVPV*AGCSPG Trigger: GCCTGGAGAGCATCCGGCTCAAACAGGAACAGAAGG...CACCCTGGCAGGCGCAGGCACAGCGGCTGGGGTGTCCACCTCAGGCAGGTTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGACACCCCAGCCGCTGTGCCTGCGCCTGCCAGGGTGGGGCAGGAGGTGGCTTTTGCTTCTGCTTaGCTAGAGACGGAGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EVDTPAAVPAPARVGQEVAFASA*LETEEE Trigger: CTCCTCCTCCGTCTCTAGCCAAGCAGAAGCAAAAGC...CACCTCCTGCCCCACCCTGGCAGGCGCAGGCACAGCGGCTGGGGTGTCCACCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | TCCAACCTGCCTGAGGTGGACACCCCAGCCGCTGTGCCTGCGCCTGCCAGGGTGGAGGTGCTTCATCTGTaGCTTTCCCCTGGAGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SNLPEVDTPAAVPAPARVEVLHL*LSPGAD Trigger: ATCCGCTCCAGGGGAAAGTCACAGATGAAGCACCTC...CACCCTGGCAGGCGCAGGCACAGCGGCTGGGGTGTCCACCTCAGGCAGGTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | GATCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTATGCTCTCCAGGCGTTaGGGGCTGGGGATGAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: DPGLRLLPTGAAAYAGGGMLSRR*GLGMKA Trigger: CGCCTTCATCCCCAGCCCCCAACGCCTGGAGAGCAT...ACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | GATCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTGGCGGGAGCTCTCGCTaGCCTCATCTGAGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: DPGLRLLPTGAAAYAGGGGGSSR*PHLRAS Trigger: TGATGCCCTCAGATGAGGCCAGCGAGAGCTCCCGCC...ACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | CCGCACTGCTCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGGATCCGGTCCAGGCCTaGCGGGAGCTCTCGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PHCSCLRCKCPPQLMGQKDPVQA*RELSLA Trigger: GGCCAGCGAGAGCTCCCGCCAGGCCTGGACCGGATC...CTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGAGCAGTGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCCCACGGATCCGGTCCAGGCCTaGCGGGAGCTCTCGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILAGRPLLSDPGLRLLPTDPVQA*RELSLA Trigger: GGCCAGCGAGAGCTCCCGCCAGGCCTGGACCGGATC...CGTGGGCAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATGATCCGGTCCAGGCCTaGCGGGAGCTCTCGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCLRCKCPPQLMGQKCRHDPVQA*RELSLA Trigger: GGCCAGCGAGAGCTCCCGCCAGGCCTGGACCGGATC...ATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | GATCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTTCATGCTCCGAGTCCTaGGCTAGGAGCCGGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPGLRLLPTGAAAYAGGGSCSES*ARSRSW Trigger: CCAAGACCGGCTCCTAGCCCAGGACTCGGAGCATGA...ACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTGCAGCAGCTGCTGGTTCTaGAGTCCAGGGATGGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SWPEIVAHGGGSLCRGRCSSCWF*SPGMAL Trigger: TAGTGCCATCCCTGGACTTCAGAACCAGCAGCTGCT...GCACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | TCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCCCCTCCAGGGAGACGTCTaGGTCCAGAGAGGGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SILAGRPLLSDPGLRLLPLQGDV*VQRGAA Trigger: AGCCGCCCCTCTCTGGACTCAGACGTCTCCCTGGAG...GGGCAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATGTTGGGGGCTGGGGATaGAGGCGATGTCTCCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCLRCKCPPQLMGQKCRHVGGWG*RRCLRP Trigger: AGGGCGGAGACATCGCCTTCATCCCCAGCCCCCAAC...ATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATGTTGAGCTCCTCGCTGGCCTCATCTaGGGGCATCAGGCTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RCKCPPQLMGQKCRHVELLAGLI*GHQAVP Trigger: AGGGACAGCCTGATGCCCTCAGATGAGGCCAGCGAG...GAGCTCAACATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATCTCTCCAGGGGTGAGTaGTCCTCCACTCGCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SCLRCKCPPQLMGQKCRHLSRGE*SSTRSP Trigger: GGGGGAGCGAGTGGAGGAGCACTCACCCCTGGAGAG...ATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTGCGTCCTGGTAGGCATCTaGATAGTCCTCCTCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SWPEIVAHGGGSLCRGRCVLVGI*IVLLQM Trigger: CATCTGGAGGAGGACTATGCAGATGCCTACCAGGAC...GCACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCCGGTCTTGGGGGTCGTaGCCGTTAGCACTGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGRSWGS*PLALGS Trigger: GCTGCCCAGTGCTAACGGGCACGACCCCCAAGACCG...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | CCGCACTGCTCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGGGCGGGAGCTCTCGCTaGCCTCATCTGAGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PHCSCLRCKCPPQLMGQKGGSSR*PHLRAS Trigger: TGATGCCCTCAGATGAGGCCAGCGAGAGCTCCCGCC...CTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGAGCAGTGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATCTCGCTGGCCTCATCTaGGGGCATCAGGCTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCLRCKCPPQLMGQKCRHLAGLI*GHQAVP Trigger: AGGGACAGCCTGATGCCCTCAGATGAGGCCAGCGAG...ATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR TCA 90 bp | TCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATGAGGTGTGTTGGCGGTaGGGCTGGTACAGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCLRCKCPPQLMGQKCRHEVCWR*GWYRSW Trigger: CCAGGACCTGTACCAGCCTCACCGCCAACACACCTC...ATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTGCACCTGCTTTTGCTTCTaGTTGGCTAGAGACGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SWPEIVAHGGGSLCRGRCTCFCF*LARDGG Trigger: TCCTCCGTCTCTAGCCAAGCAGAAGCAAAAGCAGGT...GCACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000003442.9 |
||
| CDS-3UTR GCA 90 bp | TCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTGCCGCTCAATCTCACTCTaGACTTCAGCAATGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SWPEIVAHGGGSLCRGRCRSISL*TSAMLE Trigger: CTCCAGCATTGCTGAAGTGCAGAGTGAGATTGAGCG...GCACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | GATCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTGTCCTGGTAGGCATCTaGATAGTCCTCCTCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: DPGLRLLPTGAAAYAGGGVLVGI*IVLLQM Trigger: CATCTGGAGGAGGACTATGCAGATGCCTACCAGGAC...ACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CCA 90 bp | TCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCCCATGCTCTCCAGGCGTTaGGGGCTGGGGATGAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SILAGRPLLSDPGLRLLPMLSRR*GLGMKA Trigger: CGCCTTCATCCCCAGCCCCCAACGCCTGGAGAGCAT...GGGCAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CCA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCGCTAGGAGCCGGTCTTaGGGGTCGTGCCCGTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGARSRS*GSCPLA Trigger: TGCTAACGGGCACGACCCCCAAGACCGGCTCCTAGC...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CCA 90 bp | TCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATGCTAGGAGCCGGTCTTaGGGGTCGTGCCCGTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCLRCKCPPQLMGQKCRHARSRS*GSCPLA Trigger: TGCTAACGGGCACGACCCCCAAGACCGGCTCCTAGC...ATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR TCA 90 bp | CCGCACTGCTCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGCGGAGGAGCGCTCAATaGTGGTCCTCTTGCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PHCSCLRCKCPPQLMGQKRRSAQ*WSSCQD Trigger: ATCCTGGCAAGAGGACCATCATTGAGCGCTCCTCCG...CTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGAGCAGTGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR TCA 90 bp | AGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATGTTGAGCTCCGGAGGAGCGCTCAATaGTGGTCCTCTTGCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RCKCPPQLMGQKCRHVELRRSAQ*WSSCQD Trigger: ATCCTGGCAAGAGGACCATCATTGAGCGCTCCTCCG...GAGCTCAACATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGGGCGGGTTCTTAATGGAGCATGCTCTGTAGGTCACACGCTAGAGCCAGACTCGGGTGGGCACTaGACCAGCTTATCGTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVGRVLNGACSVGHTLEPDSGGH*TSLSYA Trigger: GGCGTACGATAAGCTGGTTCAGTGCCCACCCGAGTC...TGGCTCTAGCGTGTGACCTACAGAGCATGCTCCATTAAGAACCCGCCCCACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR TCA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCGACTCGGGTGGGCACTaGACCAGCTTATCGTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGDSGGH*TSLSYA Trigger: GGCGTACGATAAGCTGGTTCAGTGCCCACCCGAGTC...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGGGCGGGTTCTTAATGGAGCATGCTCTGTAGGTCACACGCTAGAGCCAGAGGAGAGCGTCGGTTaGCAATGTCACCCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVGRVLNGACSVGHTLEPEESVG*QCHPGW Trigger: CCAGCCTGGGTGACATTGGCAACCGACGCTCTCCTC...TGGCTCTAGCGTGTGACCTACAGAGCATGCTCCATTAAGAACCCGCCCCACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR GCA 90 bp | TCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTGCAAGTATTCAGCCAGGTaGTCACAGGCATCTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWPEIVAHGGGSLCRGRCKYSAR*SQASSS Trigger: GCTAGAAGATGCCTGTGAGCACCTGGCTGAATACTT...GCACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR GCA 90 bp | TCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATCCAGATGGCGAGAGCTaGGCTGTGAAGATCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCLRCKCPPQLMGQKCRHPDGES*AVKIRS Trigger: GGACCGGATCTTCACAGCGCAGCTCTCGCCATCTGG...ATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR GCA 90 bp | GATCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTGGAACATGTTCCGCCTaGTTTTGCTTCTGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPGLRLLPTGAAAYAGGGGTCSA*FCFCLA Trigger: AGCCAAGCAGAAGCAAAAGCAGGCGGAACATGTTCC...ACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGGGCGGGTTCTTAATGGAGCATGCTCTGTAGGTCACACGCTAGAGCCATTGACTCCAGAGCCCTaGACCGGGCACTCCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: EVGRVLNGACSVGHTLEPLTPEP*TGHSSS Trigger: GGATGAGGAGTGCCCGGTCCAGGGCTCTGGAGTCAA...TGGCTCTAGCGTGTGACCTACAGAGCATGCTCCATTAAGAACCCGCCCCACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGGGCGGGTTCTTAATGGAGCATGCTCTGTAGGTCACACGCTAGAGCCATCATGCTCCGAGTCCTaGGCTAGGAGCCGGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVGRVLNGACSVGHTLEPSCSES*ARSRSW Trigger: CCAAGACCGGCTCCTAGCCCAGGACTCGGAGCATGA...TGGCTCTAGCGTGTGACCTACAGAGCATGCTCCATTAAGAACCCGCCCCACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCCTTTGGCCTCAAAGTTaGCTCCAGAGCCCTGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGLWPQS*LQSPGP Trigger: CGGTCCAGGGCTCTGGAGTCAACTTTGAGGCCAAAG...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGGTTGGGGGCTGGGGATaGAGGCGATGTCTCCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSGYVAHTHTLLLFRGVGGWG*RRCLRP Trigger: AGGGCGGAGACATCGCCTTCATCCCCAGCCCCCAAC...CCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGGGCGGGTTCTTAATGGAGCATGCTCTGTAGGTCACACGCTAGAGCCACCTTCTGTTCCTGTTTaGGCCGGATGCTCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVGRVLNGACSVGHTLEPPSVPV*AGCSPG Trigger: GCCTGGAGAGCATCCGGCTCAAACAGGAACAGAAGG...TGGCTCTAGCGTGTGACCTACAGAGCATGCTCCATTAAGAACCCGCCCCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCCCTTCTGTTCCTGTTTaGGCCGGATGCTCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGPSVPV*AGCSPG Trigger: GCCTGGAGAGCATCCGGCTCAAACAGGAACAGAAGG...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | GCATCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGGAGGAGAGCGTCGGTTaGCAATGTCACCCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASILAGRPLLSDPGLRLLEESVG*QCHPGW Trigger: CCAGCCTGGGTGACATTGGCAACCGACGCTCTCCTC...CAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | CCGCACTGCTCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTCCAACACCACTAGCTaGAGGGATTTGGCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PHCSCLRCKCPPQLMGQKSNTTS*RDLASS Trigger: CGAGCTGGCCAAATCCCTGCAGCTAGTGGTGTTGGA...CTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGAGCAGTGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGGAACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCCGGTCTTGGGGGTCGTaGCCGTTAGCACTGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRNRVSSSSGYVAHTHTLRSWGS*PLALGS Trigger: GCTGCCCAGTGCTAACGGGCACGACCCCCAAGACCG...GAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTTCCTAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | ATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCCCACGCGGTCATTGTGGTCATaGTCCGAGTCCTGGGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILAGRPLLSDPGLRLLPTRSLWS*SESWAR Trigger: CCTAGCCCAGGACTCGGAGCATGACCACAATGACCG...CGTGGGCAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | TCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCCCCGGTCATTGTGGTCATaGTCCGAGTCCTGGGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SILAGRPLLSDPGLRLLPRSLWS*SESWAR Trigger: CCTAGCCCAGGACTCGGAGCATGACCACAATGACCG...GGGCAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | CCGCACTGCTCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGCAATGTCACCCAGGCTaGAAGGGTTCCCAGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PHCSCLRCKCPPQLMGQKQCHPG*KGSQIS Trigger: GGAGATCTGGGAACCCTTCCAGCCTGGGTGACATTG...CTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGAGCAGTGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | GCATCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCTTTGGCCTCAAAGTTaGCTCCAGAGCCCTGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: ASILAGRPLLSDPGLRLLLWPQS*LQSPGP Trigger: CGGTCCAGGGCTCTGGAGTCAACTTTGAGGCCAAAG...CAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | TCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCCCAGCAGCTGCTGGTTCTaGAGTCCAGGGATGGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SILAGRPLLSDPGLRLLPSSCWF*SPGMAL Trigger: TAGTGCCATCCCTGGACTTCAGAACCAGCAGCTGCT...GGGCAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | CTTAGGAACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCGAGGTGTGTTGGCGGTaGGGCTGGTACAGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRNRVSSSSGYVAHTHTLEVCWR*GWYRSW Trigger: CCAGGACCTGTACCAGCCTCACCGCCAACACACCTC...GAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTTCCTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGGAGGTGTGTTGGCGGTaGGGCTGGTACAGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSGYVAHTHTLLLFRGEVCWR*GWYRSW Trigger: CCAGGACCTGTACCAGCCTCACCGCCAACACACCTC...CCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCAGGAAGCCCCTATCTTGCAGGAGCCATGGAGGGAAAGGACAGAAATGACGAGGAGAGCGTCGGTTaGCAATGTCACCCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESGSPYLAGAMEGKDRNDEESVG*QCHPGW Trigger: CCAGCCTGGGTGACATTGGCAACCGACGCTCTCCTC...GTCATTTCTGTCCTTTCCCTCCATGGCTCCTGCAAGATAGGGGCTTCCTGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCAGGAAGCCCCTATCTTGCAGGAGCCATGGAGGGAAAGGACAGAAATGACCCAGATGGCGAGAGCTaGGCTGTGAAGATCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESGSPYLAGAMEGKDRNDPDGES*AVKIRS Trigger: GGACCGGATCTTCACAGCGCAGCTCTCGCCATCTGG...GTCATTTCTGTCCTTTCCCTCCATGGCTCCTGCAAGATAGGGGCTTCCTGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATGTTGAGCTCCCACAGGTTTGTGCTTaGCTCTTTCCAGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RCKCPPQLMGQKCRHVELPQVCA*LFPAAA Trigger: AGCAGCAGCTGGAAAGAGCCAAGCACAAACCTGTGG...GAGCTCAACATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | CTTAGGAACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCATGCTCTCCAGGCGTTaGGGGCTGGGGATGAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LRNRVSSSSGYVAHTHTLMLSRR*GLGMKA Trigger: CGCCTTCATCCCCAGCCCCCAACGCCTGGAGAGCAT...GAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTTCCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | TCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCCCCAATGTCACCCAGGCTaGAAGGGTTCCCAGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SILAGRPLLSDPGLRLLPQCHPG*KGSQIS Trigger: GGAGATCTGGGAACCCTTCCAGCCTGGGTGACATTG...GGGCAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | AACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTGCTCGGCGGGAGCTCTCGCTaGCCTCATCTGAGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NRVSSSSGYVAHTHTLLLGGSSR*PHLRAS Trigger: TGATGCCCTCAGATGAGGCCAGCGAGAGCTCCCGCC...GAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | AACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTGCTCGCTAGGAGCCGGTCTTaGGGGTCGTGCCCGTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NRVSSSSGYVAHTHTLLLARSRS*GSCPLA Trigger: TGCTAACGGGCACGACCCCCAAGACCGGCTCCTAGC...GAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATCAGTTCCGGTCATTGTaGTCATGCTCCGAGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCLRCKCPPQLMGQKCRHQFRSL*SCSESW Trigger: CCAGGACTCGGAGCATGACCACAATGACCGGAACTG...ATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCCAGTTCCGGTCATTGTaGTCATGCTCCGAGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGQFRSL*SCSESW Trigger: CCAGGACTCGGAGCATGACCACAATGACCGGAACTG...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCGAACCCCACAGTAGCTaGCATTGGTCCTCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGEPHSS*HWSSQQ Trigger: TTGCTGTGAGGACCAATGTCAGCTACTGTGGGGTTC...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGGGCGGGTTCTTAATGGAGCATGCTCTGTAGGTCACACGCTAGAGCCAGGTCCTCACAGCAAATaGCACAGGTTTGTGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVGRVLNGACSVGHTLEPGPHSK*HRFVLG Trigger: GCCAAGCACAAACCTGTGGCATTTGCTGTGAGGACC...TGGCTCTAGCGTGTGACCTACAGAGCATGCTCCATTAAGAACCCGCCCCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | TCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCCCGGTCCTCACAGCAAATaGCACAGGTTTGTGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SILAGRPLLSDPGLRLLPGPHSK*HRFVLG Trigger: GCCAAGCACAAACCTGTGGCATTTGCTGTGAGGACC...GGGCAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGCCAGATGGCGAGAGCTaGGCTGTGAAGATCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSGYVAHTHTLLLFRGPDGES*AVKIRS Trigger: GGACCGGATCTTCACAGCGCAGCTCTCGCCATCTGG...CCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGGGCGGGTTCTTAATGGAGCATGCTCTGTAGGTCACACGCTAGAGCCAGTCCTGGTAGGCATCTaGATAGTCCTCCTCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: EVGRVLNGACSVGHTLEPVLVGI*IVLLQM Trigger: CATCTGGAGGAGGACTATGCAGATGCCTACCAGGAC...TGGCTCTAGCGTGTGACCTACAGAGCATGCTCCATTAAGAACCCGCCCCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCGCCTGCTTTTGCTTCTaGTTGGCTAGAGACGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGACFCF*LARDGG Trigger: TCCTCCGTCTCTAGCCAAGCAGAAGCAAAAGCAGGC...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGGGCGGGTTCTTAATGGAGCATGCTCTGTAGGTCACACGCTAGAGCCAGCCTGCTTTTGCTTCTaGTTGGCTAGAGACGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EVGRVLNGACSVGHTLEPACFCF*LARDGG Trigger: TCCTCCGTCTCTAGCCAAGCAGAAGCAAAAGCAGGC...TGGCTCTAGCGTGTGACCTACAGAGCATGCTCCATTAAGAACCCGCCCCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | TATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTTTGACTCCAGAGCCCTaGACCGGGCACTCCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: YVAHTHTLLLFRGASILALTPEP*TGHSSS Trigger: GGATGAGGAGTGCCCGGTCCAGGGCTCTGGAGTCAA...AGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCCTAGCTGCAGGGATTTaGCCAGCTCGAATATGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGLAAGI*PARICA Trigger: AGCGCATATTCGAGCTGGCCAAATCCCTGCAGCTAG...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCAGGAAGCCCCTATCTTGCAGGAGCCATGGAGGGAAAGGACAGAAATGACGAGGTGCTTCATCTGTaGCTTTCCCCTGGAGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ESGSPYLAGAMEGKDRNDEVLHL*LSPGAD Trigger: ATCCGCTCCAGGGGAAAGTCACAGATGAAGCACCTC...GTCATTTCTGTCCTTTCCCTCCATGGCTCCTGCAAGATAGGGGCTTCCTGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATGTTGAGCTCCCATCATCTGTACAGTaGGGTGCTTCATCTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RCKCPPQLMGQKCRHVELPSSVQ*GASSVT Trigger: AGTCACAGATGAAGCACCTCACTGTACAGATGATGG...GAGCTCAACATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | CCGCACTGCTCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGCCATCATCTGTACAGTaGGGTGCTTCATCTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PHCSCLRCKCPPQLMGQKPSSVQ*GASSVT Trigger: AGTCACAGATGAAGCACCTCACTGTACAGATGATGG...CTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGAGCAGTGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGTGCCGCCATGTTGAGCTCTGATTGCTTCATTTCTGATGTGTGGCAGTGGGACTCGGGTGGGCACTaGACCAGCTTATCGTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSAAMLSSDCFISDVWQWDSGGH*TSLSYA Trigger: GGCGTACGATAAGCTGGTTCAGTGCCCACCCGAGTC...CCACTGCCACACATCAGAAATGAAGCAATCAGAGCTCAACATGGCGGCACTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGGAACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCCAAGGCCGGTTACGCTaGCAGTTCCGGTCATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRNRVSSSSGYVAHTHTLQGRLR*QFRSLW Trigger: CCACAATGACCGGAACTGGCAGCGTAACCGGCCTTG...GAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTTCCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | GCATCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCCACAGGTTTGTGCTTaGCTCTTTCCAGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASILAGRPLLSDPGLRLLPQVCA*LFPAAA Trigger: AGCAGCAGCTGGAAAGAGCCAAGCACAAACCTGTGG...CAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| 3UTR CAA 72 bp | TCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTaGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSGYVAHTHTL*LFRGASILAGR Trigger: CCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| 3UTR CAA 72 bp | AGTTCCCTAGTCTCACCAGATGCTAAGCGTCCCGGTTaGGTGAGTGGGCCGTTTTCTAGCAGAGCTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLVSPDAKRPG*VSGPFSSRATA Trigger: AGCTGTAGCTCTGCTAGAAAACGGCCCACTCACCAAACCGGGACGCTTAGCATCTGGTGAGACTAGGGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | TATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGAGGTGCTTCATCTGTaGCTTTCCCCTGGAGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YVAHTHTLLLFRGASILAEVLHL*LSPGAD Trigger: ATCCGCTCCAGGGGAAAGTCACAGATGAAGCACCTC...AGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | TATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTAGCAGCTGCTGGTTCTaGAGTCCAGGGATGGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: YVAHTHTLLLFRGASILASSCWF*SPGMAL Trigger: TAGTGCCATCCCTGGACTTCAGAACCAGCAGCTGCT...AGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | GCATCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGTCCGTGACCTGCTTTTaGTTCTGCTTGGCTAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASILAGRPLLSDPGLRLLSVTCF*FCLARD Trigger: GTCTCTAGCCAAGCAGAAGCAAAAGCAGGTCACGGA...CAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003442.9 |
||
| CDS-3UTR GCA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCATCATGTCCGTGACCTaGTTTTGCTTCTGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGIMSVT*FCFCLA Trigger: AGCCAAGCAGAAGCAAAAGCAGGTCACGGACATGAT...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003442.9 |
||
| CDS-3UTR GCA 90 bp | TATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTTCCAACACCACTAGCTaGAGGGATTTGGCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: YVAHTHTLLLFRGASILASNTTS*RDLASS Trigger: CGAGCTGGCCAAATCCCTGCAGCTAGTGGTGTTGGA...AGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGTGCCGCCATGTTGAGCTCTGATTGCTTCATTTCTGATGTGTGGCAGTGGCAAGGCCGGTTACGCTaGCAGTTCCGGTCATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSAAMLSSDCFISDVWQWQGRLR*QFRSLW Trigger: CCACAATGACCGGAACTGGCAGCGTAACCGGCCTTG...CCACTGCCACACATCAGAAATGAAGCAATCAGAGCTCAACATGGCGGCACTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGGAAGCCCCTATCTTGCAGGAGCCATGGAGGGAAAGGACAGAAATGACCTAGCTGCAGGGATTTaGCCAGCTCGAATATGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ESGSPYLAGAMEGKDRNDLAAGI*PARICA Trigger: AGCGCATATTCGAGCTGGCCAAATCCCTGCAGCTAG...GTCATTTCTGTCCTTTCCCTCCATGGCTCCTGCAAGATAGGGGCTTCCTGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCTCGCTGCAGTACCTTTaGCGAGGACACTTTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGSLQYL*RGHFDK Trigger: TTTGTCAAAGTGTCCTCGCCAAAGGTACTGCAGCGA...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATTCGCTGCAGTACCTTTaGCGAGGACACTTTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SCLRCKCPPQLMGQKCRHSLQYL*RGHFDK Trigger: TTTGTCAAAGTGTCCTCGCCAAAGGTACTGCAGCGA...ATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGGGCGGGTTCTTAATGGAGCATGCTCTGTAGGTCACACGCTAGAGCCATCGCTGCAGTACCTTTaGCGAGGACACTTTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: EVGRVLNGACSVGHTLEPSLQYL*RGHFDK Trigger: TTTGTCAAAGTGTCCTCGCCAAAGGTACTGCAGCGA...TGGCTCTAGCGTGTGACCTACAGAGCATGCTCCATTAAGAACCCGCCCCACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTGTCCTGTTCCTCTCATCTAACCCTAACTGAAGTGGCTGCTATGAGTCAGCGGTCATTGTGGTCATaGTCCGAGTCCTGGGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVSCSSHLTLTEVAAMSQRSLWS*SESWAR Trigger: CCTAGCCCAGGACTCGGAGCATGACCACAATGACCG...CTGACTCATAGCAGCCACTTCAGTTAGGGTTAGATGAGAGGAACAGGACACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGTGCCGCCATGTTGAGCTCTGATTGCTTCATTTCTGATGTGTGGCAGTGGCAATGTCACCCAGGCTaGAAGGGTTCCCAGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSAAMLSSDCFISDVWQWQCHPG*KGSQIS Trigger: GGAGATCTGGGAACCCTTCCAGCCTGGGTGACATTG...CCACTGCCACACATCAGAAATGAAGCAATCAGAGCTCAACATGGCGGCACTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CCA 90 bp | TCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGGCTTTTGCTTCTGCTTaGCTAGAGACGGAGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSGYVAHTHTLLLFRGAFASA*LETEEE Trigger: CTCCTCCTCCGTCTCTAGCCAAGCAGAAGCAAAAGC...CCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | AACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTGCTCCTAGCTGCAGGGATTTaGCCAGCTCGAATATGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NRVSSSSGYVAHTHTLLLLAAGI*PARICA Trigger: AGCGCATATTCGAGCTGGCCAAATCCCTGCAGCTAG...GAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGTGCCGCCATGTTGAGCTCTGATTGCTTCATTTCTGATGTGTGGCAGTGGGAACCCCACAGTAGCTaGCATTGGTCCTCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RSAAMLSSDCFISDVWQWEPHSS*HWSSQQ Trigger: TTGCTGTGAGGACCAATGTCAGCTACTGTGGGGTTC...CCACTGCCACACATCAGAAATGAAGCAATCAGAGCTCAACATGGCGGCACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR TCA 90 bp | TATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTTCTGCATCATGTCCGTaGCCTGCTTTTGCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YVAHTHTLLLFRGASILASASCP*PAFASA Trigger: AGCAGAAGCAAAAGCAGGTCACGGACATGATGCAGA...AGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003442.9 |
||
| CDS-3UTR GCA 90 bp | AACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTGCTCCGCTCAATCTCACTCTaGACTTCAGCAATGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NRVSSSSGYVAHTHTLLLRSISL*TSAMLE Trigger: CTCCAGCATTGCTGAAGTGCAGAGTGAGATTGAGCG...GAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGGAACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCCGCTCAATCTCACTCTaGACTTCAGCAATGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRNRVSSSSGYVAHTHTLRSISL*TSAMLE Trigger: CTCCAGCATTGCTGAAGTGCAGAGTGAGATTGAGCG...GAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTTCCTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR GCA 90 bp | CTTAGGAACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCGGAACATGTTCCGCCTaGTTTTGCTTCTGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRNRVSSSSGYVAHTHTLGTCSA*FCFCLA Trigger: AGCCAAGCAGAAGCAAAAGCAGGCGGAACATGTTCC...GAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTTCCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTGTCCTGTTCCTCTCATCTAACCCTAACTGAAGTGGCTGCTATGAGTCAGCAGTTCCGGTCATTGTaGTCATGCTCCGAGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVSCSSHLTLTEVAAMSQQFRSL*SCSESW Trigger: CCAGGACTCGGAGCATGACCACAATGACCGGAACTG...CTGACTCATAGCAGCCACTTCAGTTAGGGTTAGATGAGAGGAACAGGACACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| 3UTR CAA 72 bp | TGCTTAGGAACCGAGTTTCTTCTTCCTCAGGCTATGTaGCCCACACTCACACCCTCTTGCTCTTTAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLGTEFLLPQAM*PTLTPSCSLEG Trigger: CCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTTCCTAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| 3UTR CAA 72 bp | ACTGAAGTGGCTGCTATGAGTCAGGAAGCCCCTATCTaGCAGGAGCCATGGAGGGAAAGGACAGAAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: TEVAAMSQEAPI*QEPWRERTEMT Trigger: TGTCATTTCTGTCCTTTCCCTCCATGGCTCCTGCAAGATAGGGGCTTCCTGACTCATAGCAGCCACTTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR GCA 90 bp | TATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTAAGTATTCAGCCAGGTaGTCACAGGCATCTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: YVAHTHTLLLFRGASILAKYSAR*SQASSS Trigger: GCTAGAAGATGCCTGTGAGCACCTGGCTGAATACTT...AGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR GCA 90 bp | TCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGAAGTATTCAGCCAGGTaGTCACAGGCATCTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSGYVAHTHTLLLFRGKYSAR*SQASSS Trigger: GCTAGAAGATGCCTGTGAGCACCTGGCTGAATACTT...CCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CCA 90 bp | ACTGTGTCCTGTTCCTCTCATCTAACCCTAACTGAAGTGGCTGCTATGAGTCAGCCACAGGTTTGTGCTTaGCTCTTTCCAGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVSCSSHLTLTEVAAMSQPQVCA*LFPAAA Trigger: AGCAGCAGCTGGAAAGAGCCAAGCACAAACCTGTGG...CTGACTCATAGCAGCCACTTCAGTTAGGGTTAGATGAGAGGAACAGGACACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CCA 90 bp | ACTGTGTCCTGTTCCTCTCATCTAACCCTAACTGAAGTGGCTGCTATGAGTCAGGCTTTTGCTTCTGCTTaGCTAGAGACGGAGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVSCSSHLTLTEVAAMSQAFASA*LETEEE Trigger: CTCCTCCTCCGTCTCTAGCCAAGCAGAAGCAAAAGC...CTGACTCATAGCAGCCACTTCAGTTAGGGTTAGATGAGAGGAACAGGACACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR TCA 90 bp | ACTGTGTCCTGTTCCTCTCATCTAACCCTAACTGAAGTGGCTGCTATGAGTCAGCCATCATCTGTACAGTaGGGTGCTTCATCTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: TVSCSSHLTLTEVAAMSQPSSVQ*GASSVT Trigger: AGTCACAGATGAAGCACCTCACTGTACAGATGATGG...CTGACTCATAGCAGCCACTTCAGTTAGGGTTAGATGAGAGGAACAGGACACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS GCA 90 bp | TTGGGCCAAGGCCGGTTACGCTGCCAGTTCCGGTCATTGTGGTCATaGTCCGAGTCCTGGGCTAGGAGCCGGTCTTGGGGGTCGTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LGQGRLRCQFRSLWS*SESWARSRSWGSCP Trigger: CGGGCACGACCCCCAAGACCGGCTCCTAGCCCAGGACTCGGAGCATGACCACAATGACCGGAACTGGCAGCGTAACCGGCCTTGGCCCAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CCA 90 bp | AGCTGCGCTGTGAAGATCCGGTCCAGGCCTGGCGGGAGCTCTCGCTaGCCTCATCTGAGGGCATCAGGCTGTCCCTCTCCAGGGGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SCAVKIRSRPGGSSR*PHLRASGCPSPGVS Trigger: ACTCACCCCTGGAGAGGGACAGCCTGATGCCCTCAGATGAGGCCAGCGAGAGCTCCCGCCAGGCCTGGACCGGATCTTCACAGCGCAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CCA 90 bp | TCCTCCAGATGGCGAGAGCTGCGCTGTGAAGATCCGGTCCAGGCCTaGCGGGAGCTCTCGCTGGCCTCATCTGAGGGCATCAGGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRWRELRCEDPVQA*RELSLASSEGIRLS Trigger: GGACAGCCTGATGCCCTCAGATGAGGCCAGCGAGAGCTCCCGCCAGGCCTGGACCGGATCTTCACAGCGCAGCTCTCGCCATCTGGAGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CCA 90 bp | CGGTCATTGTGGTCATGCTCCGAGTCCTGGGCTAGGAGCCGGTCTTaGGGGTCGTGCCCGTTAGCACTGGGCAGCCCCGAGGTGTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSLWSCSESWARSRS*GSCPLALGSPEVCW Trigger: CCAACACACCTCGGGGCTGCCCAGTGCTAACGGGCACGACCCCCAAGACCGGCTCCTAGCCCAGGACTCGGAGCATGACCACAATGACCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS GCA 90 bp | GGTCCTGGTAGGCATCTGCATAGTCCTCCTCCAGATGGCGAGAGCTaGGCTGTGAAGATCCGGTCCAGGCCTGGCGGGAGCTCTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGRHLHSPPPDGES*AVKIRSRPGGSSRW Trigger: CCAGCGAGAGCTCCCGCCAGGCCTGGACCGGATCTTCACAGCGCAGCTCTCGCCATCTGGAGGAGGACTATGCAGATGCCTACCAGGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CCA 90 bp | CGGTTACGCTGCCAGTTCCGGTCATTGTGGTCATGCTCCGAGTCCTaGGCTAGGAGCCGGTCTTGGGGGTCGTGCCCGTTAGCACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLRCQFRSLWSCSES*ARSRSWGSCPLALG Trigger: GCCCAGTGCTAACGGGCACGACCCCCAAGACCGGCTCCTAGCCCAGGACTCGGAGCATGACCACAATGACCGGAACTGGCAGCGTAACCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CCA 90 bp | CTGTCCTTGGGCCAAGGCCGGTTACGCTGCCAGTTCCGGTCATTGTaGTCATGCTCCGAGTCCTGGGCTAGGAGCCGGTCTTGGGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LSLGQGRLRCQFRSL*SCSESWARSRSWGS Trigger: CGACCCCCAAGACCGGCTCCTAGCCCAGGACTCGGAGCATGACCACAATGACCGGAACTGGCAGCGTAACCGGCCTTGGCCCAAGGACAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | TCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTGCGGAGCCAGTGAGGTCTaGGCAAGTTGTGCTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWPEIVAHGGGSLCRGRCGASEV*ASCAGW Trigger: CCACCCAGCACAACTTGCCAAGACCTCACTGGCTCC...GCACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | CCGCACTGCTCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTTGAGCACAGAGCGCTaGGCCAGCGAGAGGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PHCSCLRCKCPPQLMGQKLSTER*ASERSA Trigger: GGCCGACCTCTCGCTGGCCAAGCGCTCTGTGCTCAA...CTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGAGCAGTGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | TCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTGCACTAGCTGCAGGGATTaGGCCAGCTCGAATATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SWPEIVAHGGGSLCRGRCTSCRD*ASSNMR Trigger: GCGCATATTCGAGCTGGCCAAATCCCTGCAGCTAGT...GCACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | TCCAACCTGCCTGAGGTGGACACCCCAGCCGCTGTGCCTGCGCCTGCCAGGGTGCGTTCAGCAGGAAGGTaGCACTGGAGTCAGAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SNLPEVDTPAAVPAPARVRSAGR*HWSQKK Trigger: CTTTTTCTGACTCCAGTGCAACCTTCCTGCTGAACG...CACCCTGGCAGGCGCAGGCACAGCGGCTGGGGTGTCCACCTCAGGCAGGTTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109150.9 |
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| CDS-3UTR CAA 90 bp | TCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCGCCATGATGCTCTCCAGGCGTaGGGGGCTGGGGATGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SCLRCKCPPQLMGQKCRHDALQA*GAGDEG Trigger: GCCTTCATCCCCAGCCCCCAACGCCTGGAGAGCATC...ATGGCGGCACTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCGATGCTCTCCAGGCGTaGGGGGCTGGGGATGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGDALQA*GAGDEG Trigger: GCCTTCATCCCCAGCCCCCAACGCCTGGAGAGCATC...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCTTGAGCACAGAGCGCTaGGCCAGCGAGAGGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGLSTER*ASERSA Trigger: GGCCGACCTCTCGCTGGCCAAGCGCTCTGTGCTCAA...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | GATCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTGTCCTCTTGCCAGGATaGTTGAGCACAGAGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DPGLRLLPTGAAAYAGGGVLLPG*LSTERL Trigger: CAAGCGCTCTGTGCTCAACAATCCTGGCAAGAGGAC...ACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | TCCAACCTGCCTGAGGTGGACACCCCAGCCGCTGTGCCTGCGCCTGCCAGGGTGCCGATCCACCAGTCATaGCTGTACTTCTCTTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: SNLPEVDTPAAVPAPARVPIHQS*LYFSLM Trigger: CATTAAAGAGAAGTACAGCAATGACTGGTGGATCGG...CACCCTGGCAGGCGCAGGCACAGCGGCTGGGGTGTCCACCTCAGGCAGGTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | TCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCCCGGAGGAGAGCGTCGGTaGCCAATGTCACCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SILAGRPLLSDPGLRLLPGGERR*PMSPRL Trigger: CAGCCTGGGTGACATTGGCAACCGACGCTCTCCTCC...GGGCAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGGGCGGGTTCTTAATGGAGCATGCTCTGTAGGTCACACGCTAGAGCCAGGAGGAGAGCGTCGGTaGCCAATGTCACCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EVGRVLNGACSVGHTLEPGGERR*PMSPRL Trigger: CAGCCTGGGTGACATTGGCAACCGACGCTCTCCTCC...TGGCTCTAGCGTGTGACCTACAGAGCATGCTCCATTAAGAACCCGCCCCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS GCA 90 bp | GCTTTTGCTTCTGCTTGGCTAGAGACGGAGGAGGAGAGCGTCGGTTaGCAATGTCACCCAGGCTGGAAGGGTTCCCAGATCTCCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AFASAWLETEEESVG*QCHPGWKGSQISWP Trigger: AGGCCAGGAGATCTGGGAACCCTTCCAGCCTGGGTGACATTGGCAACCGACGCTCTCCTCCTCCGTCTCTAGCCAAGCAGAAGCAAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGGGCGGGTTCTTAATGGAGCATGCTCTGTAGGTCACACGCTAGAGCCAGGAGCCAGTGAGGTCTaGGCAAGTTGTGCTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EVGRVLNGACSVGHTLEPGASEV*ASCAGW Trigger: CCACCCAGCACAACTTGCCAAGACCTCACTGGCTCC...TGGCTCTAGCGTGTGACCTACAGAGCATGCTCCATTAAGAACCCGCCCCACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | TCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCCCGGAGCCAGTGAGGTCTaGGCAAGTTGTGCTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SILAGRPLLSDPGLRLLPGASEV*ASCAGW Trigger: CCACCCAGCACAACTTGCCAAGACCTCACTGGCTCC...GGGCAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | CCGCACTGCTCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGTGCCAGTTCCGGTCATaGTGGTCATGCTCCGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PHCSCLRCKCPPQLMGQKCQFRS*WSCSES Trigger: GGACTCGGAGCATGACCACAATGACCGGAACTGGCA...CTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGAGCAGTGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | AACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTGCTCGATGCTCTCCAGGCGTaGGGGGCTGGGGATGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NRVSSSSGYVAHTHTLLLDALQA*GAGDEG Trigger: GCCTTCATCCCCAGCCCCCAACGCCTGGAGAGCATC...GAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCCCACGCTCTTGCCAGGATTGTaGAGCACAGAGCGCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILAGRPLLSDPGLRLLPTLLPGL*STERLA Trigger: GGCCAAGCGCTCTGTGCTCAACAATCCTGGCAAGAG...CGTGGGCAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | GATCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTTTTGGCGAGGACACTTaGACAAAGACGATGATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: DPGLRLLPTGAAAYAGGGFGEDT*TKTMMG Trigger: TCCCATCATCGTCTTTGTCAAAGTGTCCTCGCCAAA...ACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGGGCGGGTTCTTAATGGAGCATGCTCTGTAGGTCACACGCTAGAGCCATGCCAGTTCCGGTCATaGTGGTCATGCTCCGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EVGRVLNGACSVGHTLEPCQFRS*WSCSES Trigger: GGACTCGGAGCATGACCACAATGACCGGAACTGGCA...TGGCTCTAGCGTGTGACCTACAGAGCATGCTCCATTAAGAACCCGCCCCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | TCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCCCTGCCAGTTCCGGTCATaGTGGTCATGCTCCGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SILAGRPLLSDPGLRLLPCQFRS*WSCSES Trigger: GGACTCGGAGCATGACCACAATGACCGGAACTGGCA...GGGCAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | CCGCACTGCTCCTGTCTTAGGTGTAAGTGCCCACCCCAGCTGATGGGACAGAAGGCAAATGCCACAGGTTaGTGCTTGGCTCTTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PHCSCLRCKCPPQLMGQKANATG*CLALSS Trigger: GCTGGAAAGAGCCAAGCACAAACCTGTGGCATTTGC...CTTCTGTCCCATCAGCTGGGGTGGGCACTTACACCTAAGACAGGAGCAGTGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | GATCCTGGCCTGAGATTGTTGCCCACGGGGGCGGCAGCTTATGCAGGGGGAGGTCCGATCCACCAGTCATaGCTGTACTTCTCTTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: DPGLRLLPTGAAAYAGGGPIHQS*LYFSLM Trigger: CATTAAAGAGAAGTACAGCAATGACTGGTGGATCGG...ACCTCCCCCTGCATAAGCTGCCGCCCCCGTGGGCAACAATCTCAGGCCAGGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | TATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAGGAGAGCGTCGGTaGCCAATGTCACCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YVAHTHTLLLFRGASILAGGERR*PMSPRL Trigger: CAGCCTGGGTGACATTGGCAACCGACGCTCTCCTCC...AGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCACTAGCTGCAGGGATTaGGCCAGCTCGAATATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGTSCRD*ASSNMR Trigger: GCGCATATTCGAGCTGGCCAAATCCCTGCAGCTAGT...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGGGCGGGTTCTTAATGGAGCATGCTCTGTAGGTCACACGCTAGAGCCAACTAGCTGCAGGGATTaGGCCAGCTCGAATATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: EVGRVLNGACSVGHTLEPTSCRD*ASSNMR Trigger: GCGCATATTCGAGCTGGCCAAATCCCTGCAGCTAGT...TGGCTCTAGCGTGTGACCTACAGAGCATGCTCCATTAAGAACCCGCCCCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS TCA 90 bp | CGGGTGGGCACTGAACCAGCTTATCGTACGCCATCATCTGTACAGTaGGGTGCTTCATCTGTGACTTTCCCCTGGAGCGGATCAGTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RVGTEPAYRTPSSVQ*GASSVTFPWSGSVA Trigger: AGCGACTGATCCGCTCCAGGGGAAAGTCACAGATGAAGCACCTCACTGTACAGATGATGGCGTACGATAAGCTGGTTCAGTGCCCACCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCGCAAATGCCACAGGTTaGTGCTTGGCTCTTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGANATG*CLALSS Trigger: GCTGGAAAGAGCCAAGCACAAACCTGTGGCATTTGC...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | GCATCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGGTCCTCTTGCCAGGATaGTTGAGCACAGAGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASILAGRPLLSDPGLRLLVLLPG*LSTERL Trigger: CAAGCGCTCTGTGCTCAACAATCCTGGCAAGAGGAC...CAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | CTTAGGAACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCGCCTTCTGTTCCTGTTaGAGCCGGATGCTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRNRVSSSSGYVAHTHTLAFCSC*SRMLSR Trigger: CCTGGAGAGCATCCGGCTCAAACAGGAACAGAAGGC...GAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTTCCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGGCCTTCTGTTCCTGTTaGAGCCGGATGCTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSGYVAHTHTLLLFRGAFCSC*SRMLSR Trigger: CCTGGAGAGCATCCGGCTCAAACAGGAACAGAAGGC...CCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | CTTAGGAACCGAGTTTCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCCTCTTGCCAGGATTGTaGAGCACAGAGCGCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRNRVSSSSGYVAHTHTLLLPGL*STERLA Trigger: GGCCAAGCGCTCTGTGCTCAACAATCCTGGCAAGAG...GAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGAAACTCGGTTCCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS TCA 90 bp | CAGCTTATCGTACGCCATCATCTGTACAGTGAGGTGCTTCATCTGTaGCTTTCCCCTGGAGCGGATCAGTCGCTGCAGTACCTTTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: QLIVRHHLYSEVLHL*LSPGADQSLQYLWR Trigger: TCGCCAAAGGTACTGCAGCGACTGATCCGCTCCAGGGGAAAGTCACAGATGAAGCACCTCACTGTACAGATGATGGCGTACGATAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGGTCCTCTTGCCAGGATaGTTGAGCACAGAGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSGYVAHTHTLLLFRGVLLPG*LSTERL Trigger: CAAGCGCTCTGTGCTCAACAATCCTGGCAAGAGGAC...CCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS-3UTR CAA 90 bp | TCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGCCCTCAATGATGGTCCTCTaGCCAGGATTGTTGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SILAGRPLLSDPGLRLLPSMMVL*PGLLST Trigger: TGTGCTCAACAATCCTGGCAAGAGGACCATCATTGA...GGGCAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | CCCACACTCACACCCTCTTGCTCTTTAGAGGGGCATCCATTCTGGCTGGAAGGCTCAATGATGGTCCTCTaGCCAGGATTGTTGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PTLTPSCSLEGHPFWLEGSMMVL*PGLLST Trigger: TGTGCTCAACAATCCTGGCAAGAGGACCATCATTGA...GCCTTCCAGCCAGAATGGATGCCCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | ACTGTGTCCTGTTCCTCTCATCTAACCCTAACTGAAGTGGCTGCTATGAGTCAGGCCTTCTGTTCCTGTTaGAGCCGGATGCTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVSCSSHLTLTEVAAMSQAFCSC*SRMLSR Trigger: CCTGGAGAGCATCCGGCTCAAACAGGAACAGAAGGC...CTGACTCATAGCAGCCACTTCAGTTAGGGTTAGATGAGAGGAACAGGACACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | GCATCCATTCTGGCTGGAAGGCCCCTGCTAAGTGATCCTGGCCTGAGATTGTTGTTTGGCGAGGACACTTaGACAAAGACGATGATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASILAGRPLLSDPGLRLLFGEDT*TKTMMG Trigger: TCCCATCATCGTCTTTGTCAAAGTGTCCTCGCCAAA...CAACAATCTCAGGCCAGGATCACTTAGCAGGGGCCTTCCAGCCAGAATGGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | ACTGTGTCCTGTTCCTCTCATCTAACCCTAACTGAAGTGGCTGCTATGAGTCAGGCAAATGCCACAGGTTaGTGCTTGGCTCTTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TVSCSSHLTLTEVAAMSQANATG*CLALSS Trigger: GCTGGAAAGAGCCAAGCACAAACCTGTGGCATTTGC...CTGACTCATAGCAGCCACTTCAGTTAGGGTTAGATGAGAGGAACAGGACACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | TCTTCTTCCTCAGGCTATGTTGCCCACACTCACACCCTCTTGCTCTTTAGAGGGTTTGGCGAGGACACTTaGACAAAGACGATGATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSGYVAHTHTLLLFRGFGEDT*TKTMMG Trigger: TCCCATCATCGTCTTTGTCAAAGTGTCCTCGCCAAA...CCCTCTAAAGAGCAAGAGGGTGTGAGTGTGGGCAACATAGCCTGAGGAAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS-3UTR CAA 90 bp | ACTGTGTCCTGTTCCTCTCATCTAACCCTAACTGAAGTGGCTGCTATGAGTCAGTCAATGATGGTCCTCTaGCCAGGATTGTTGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TVSCSSHLTLTEVAAMSQSMMVL*PGLLST Trigger: TGTGCTCAACAATCCTGGCAAGAGGACCATCATTGA...CTGACTCATAGCAGCCACTTCAGTTAGGGTTAGATGAGAGGAACAGGACACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS GCA 72 bp | TCCGAGTCCTGGGCTAGGAGCCGGTCTTGGGGGTCGTaGCCGTTAGCACTGGGCAGCCCCGAGGTGTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SESWARSRSWGS*PLALGSPEVCW Trigger: CCAACACACCTCGGGGCTGCCCAGTGCTAACGGGCACGACCCCCAAGACCGGCTCCTAGCCCAGGACTCGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CCA 72 bp | TGGTCATGCTCCGAGTCCTGGGCTAGGAGCCGGTCTTaGGGGTCGTGCCCGTTAGCACTGGGCAGCCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: WSCSESWARSRS*GSCPLALGSPE Trigger: CTCGGGGCTGCCCAGTGCTAACGGGCACGACCCCCAAGACCGGCTCCTAGCCCAGGACTCGGAGCATGACCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CCA 72 bp | TGGCGAGAGCTGCGCTGTGAAGATCCGGTCCAGGCCTaGCGGGAGCTCTCGCTGGCCTCATCTGAGGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: WRELRCEDPVQA*RELSLASSEGI Trigger: GATGCCCTCAGATGAGGCCAGCGAGAGCTCCCGCCAGGCCTGGACCGGATCTTCACAGCGCAGCTCTCGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS GCA 72 bp | GGCCGGTTACGCTGCCAGTTCCGGTCATTGTGGTCATaGTCCGAGTCCTGGGCTAGGAGCCGGTCTTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRLRCQFRSLWS*SESWARSRSWG Trigger: CCCCCAAGACCGGCTCCTAGCCCAGGACTCGGAGCATGACCACAATGACCGGAACTGGCAGCGTAACCGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CCA 72 bp | GTGAAGATCCGGTCCAGGCCTGGCGGGAGCTCTCGCTaGCCTCATCTGAGGGCATCAGGCTGTCCCTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VKIRSRPGGSSR*PHLRASGCPSP Trigger: TGGAGAGGGACAGCCTGATGCCCTCAGATGAGGCCAGCGAGAGCTCCCGCCAGGCCTGGACCGGATCTTCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CAA 72 bp | GTCGTGCCCGTTAGCACTGGGCAGCCCCGAGGTGTGTaGGCGGTGAGGCTGGTACAGGTCCTGGTAGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: VVPVSTGQPRGV*AVRLVQVLVGI Trigger: GATGCCTACCAGGACCTGTACCAGCCTCACCGCCAACACACCTCGGGGCTGCCCAGTGCTAACGGGCACGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS TCA 72 bp | TGCATAGTCCTCCTCCAGATGGCGAGAGCTGCGCTGTaGAGATCCGGTCCAGGCCTGGCGGGAGCTCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: CIVLLQMARAAL*RSGPGLAGALA Trigger: AGCGAGAGCTCCCGCCAGGCCTGGACCGGATCTTCACAGCGCAGCTCTCGCCATCTGGAGGAGGACTATGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CCA 72 bp | GGCCAAGGCCGGTTACGCTGCCAGTTCCGGTCATTGTaGTCATGCTCCGAGTCCTGGGCTAGGAGCCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GQGRLRCQFRSL*SCSESWARSRS Trigger: AGACCGGCTCCTAGCCCAGGACTCGGAGCATGACCACAATGACCGGAACTGGCAGCGTAACCGGCCTTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CAA 72 bp | TTGGGCCAAGGCCGGTTACGCTGCCAGTTCCGGTCATaGTGGTCATGCTCCGAGTCCTGGGCTAGGAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LGQGRLRCQFRS*WSCSESWARSR Trigger: CCGGCTCCTAGCCCAGGACTCGGAGCATGACCACAATGACCGGAACTGGCAGCGTAACCGGCCTTGGCCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CAA 90 bp | GTCTTGGGGGTCGTGCCCGTTAGCACTGGGCAGCCCCGAGGTGTGTaGGCGGTGAGGCTGGTACAGGTCCTGGTAGGCATCTGCATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VLGVVPVSTGQPRGV*AVRLVQVLVGICIV Trigger: GACTATGCAGATGCCTACCAGGACCTGTACCAGCCTCACCGCCAACACACCTCGGGGCTGCCCAGTGCTAACGGGCACGACCCCCAAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS CCA 72 bp | TGCCAGTTCCGGTCATTGTGGTCATGCTCCGAGTCCTaGGCTAGGAGCCGGTCTTGGGGGTCGTGCCCGTTA | + |
|
Preference number: 6 (lower is better) Translates to: CQFRSLWSCSES*ARSRSWGSCPL Trigger: TAACGGGCACGACCCCCAAGACCGGCTCCTAGCCCAGGACTCGGAGCATGACCACAATGACCGGAACTGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CAA 72 bp | GAAGGGTTCCCAGATCTCCTGGCCTTCTGTTCCTGTTaGAGCCGGATGCTCTCCAGGCGTTGGGGGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EGFPDLLAFCSC*SRMLSRRWGLG Trigger: CCCCAGCCCCCAACGCCTGGAGAGCATCCGGCTCAAACAGGAACAGAAGGCCAGGAGATCTGGGAACCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS GCA 72 bp | TTGGCGGTGAGGCTGGTACAGGTCCTGGTAGGCATCTaGATAGTCCTCCTCCAGATGGCGAGAGCTGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LAVRLVQVLVGI*IVLLQMARAAL Trigger: CAGCGCAGCTCTCGCCATCTGGAGGAGGACTATGCAGATGCCTACCAGGACCTGTACCAGCCTCACCGCCAA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS CCA 72 bp | TTCTGTTCCTGTTTGAGCCGGATGCTCTCCAGGCGTTaGGGGCTGGGGATGAAGGCGATGTCTCCGCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FCSCLSRMLSRR*GLGMKAMSPPS Trigger: AGAGGGCGGAGACATCGCCTTCATCCCCAGCCCCCAACGCCTGGAGAGCATCCGGCTCAAACAGGAACAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CAA 72 bp | ATGGTCCTCTTGCCAGGATTGTTGAGCACAGAGCGCTaGGCCAGCGAGAGGTCGGCCGTGACGCGTGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: MVLLPGLLSTER*ASERSAVTRVM Trigger: CATCACACGCGTCACGGCCGACCTCTCGCTGGCCAAGCGCTCTGTGCTCAACAATCCTGGCAAGAGGACCAT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS GCA 72 bp | TCTGCTTGGCTAGAGACGGAGGAGGAGAGCGTCGGTTaGCAATGTCACCCAGGCTGGAAGGGTTCCCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: SAWLETEEESVG*QCHPGWKGSQI Trigger: GATCTGGGAACCCTTCCAGCCTGGGTGACATTGGCAACCGACGCTCTCCTCCTCCGTCTCTAGCCAAGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS CCA 72 bp | GAGGAGGAGAGCGTCGGTTGCCAATGTCACCCAGGCTaGAAGGGTTCCCAGATCTCCTGGCCTTCTGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: EEESVGCQCHPG*KGSQISWPSVP Trigger: AGGAACAGAAGGCCAGGAGATCTGGGAACCCTTCCAGCCTGGGTGACATTGGCAACCGACGCTCTCCTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS CAA 90 bp | TGCTTTTGCTTCTGCTTGGCTAGAGACGGAGGAGGAGAGCGTCGGTaGCCAATGTCACCCAGGCTGGAAGGGTTCCCAGATCTCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CFCFCLARDGGGERR*PMSPRLEGFPDLLA Trigger: GGCCAGGAGATCTGGGAACCCTTCCAGCCTGGGTGACATTGGCAACCGACGCTCTCCTCCTCCGTCTCTAGCCAAGCAGAAGCAAAAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS CCA 72 bp | ACGGGGGAACATGTTCCGCCTGCTTTTGCTTCTGCTTaGCTAGAGACGGAGGAGGAGAGCGTCGGTTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: TGEHVPPAFASA*LETEEESVGCQ Trigger: TTGGCAACCGACGCTCTCCTCCTCCGTCTCTAGCCAAGCAGAAGCAAAAGCAGGCGGAACATGTTCCCCCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109150.9 ENSMUST00000230490.2 |
||
| CDS CAA 72 bp | TTCTGCTTGGCTAGAGACGGAGGAGGAGAGCGTCGGTaGCCAATGTCACCCAGGCTGGAAGGGTTCCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: FCLARDGGGERR*PMSPRLEGFPD Trigger: ATCTGGGAACCCTTCCAGCCTGGGTGACATTGGCAACCGACGCTCTCCTCCTCCGTCTCTAGCCAAGCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CAA 72 bp | TACGGGGGAACATGTTCCGCCTGCTTTTGCTTCTGCTaGGCTAGAGACGGAGGAGGAGAGCGTCGGTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: YGGTCSACFCFC*ARDGGGERRLP Trigger: TGGCAACCGACGCTCTCCTCCTCCGTCTCTAGCCAAGCAGAAGCAAAAGCAGGCGGAACATGTTCCCCCGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS GCA 72 bp | GAGGGCACCACATCATACGGGGGAACATGTTCCGCCTaGTTTTGCTTCTGCTTGGCTAGAGACGGAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: EGTTSYGGTCSA*FCFCLARDGGG Trigger: TCCTCCTCCGTCTCTAGCCAAGCAGAAGCAAAAGCAGGCGGAACATGTTCCCCCGTATGATGTGGTGCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CAA 90 bp | CCCCTGGAGCGGATCAGTCGCTGCAGTACCTTTGGCGAGGACACTTaGACAAAGACGATGATGGGAGCCAGTGAGGTCTTGGCAAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: PLERISRCSTFGEDT*TKTMMGASEVLASC Trigger: ACAACTTGCCAAGACCTCACTGGCTCCCATCATCGTCTTTGTCAAAGTGTCCTCGCCAAAGGTACTGCAGCGACTGATCCGCTCCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS GCA 72 bp | ACCACATCATACGGGGGAACATGTTCCGCCTGCTTTTaGTTCTGCTTGGCTAGAGACGGAGGAGGAGAGCGT | + |
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Preference number: 6 (lower is better) Translates to: TTSYGGTCSACF*FCLARDGGGER Trigger: ACGCTCTCCTCCTCCGTCTCTAGCCAAGCAGAAGCAAAAGCAGGCGGAACATGTTCCCCCGTATGATGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CCA 72 bp | CTTTCCCCTGGAGCGGATCAGTCGCTGCAGTACCTTTaGCGAGGACACTTTGACAAAGACGATGATGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LSPGADQSLQYL*RGHFDKDDDGS Trigger: GCTCCCATCATCGTCTTTGTCAAAGTGTCCTCGCCAAAGGTACTGCAGCGACTGATCCGCTCCAGGGGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS TCA 72 bp | GTACGCCATCATCTGTACAGTGAGGTGCTTCATCTGTaGCTTTCCCCTGGAGCGGATCAGTCGCTGCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: VRHHLYSEVLHL*LSPGADQSLQY Trigger: GTACTGCAGCGACTGATCCGCTCCAGGGGAAAGTCACAGATGAAGCACCTCACTGTACAGATGATGGCGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS CAA 72 bp | CGGATCAGTCGCTGCAGTACCTTTGGCGAGGACACTTaGACAAAGACGATGATGGGAGCCAGTGAGGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RISRCSTFGEDT*TKTMMGASEVL Trigger: CAAGACCTCACTGGCTCCCATCATCGTCTTTGTCAAAGTGTCCTCGCCAAAGGTACTGCAGCGACTGATCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS TCA 72 bp | ACTGAACCAGCTTATCGTACGCCATCATCTGTACAGTaGGGTGCTTCATCTGTGACTTTCCCCTGGAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: TEPAYRTPSSVQ*GASSVTFPWSG Trigger: TCCGCTCCAGGGGAAAGTCACAGATGAAGCACCTCACTGTACAGATGATGGCGTACGATAAGCTGGTTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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| CDS TCA 72 bp | TCATCCAGAATCACGTCGAATGACTCGGGTGGGCACTaGACCAGCTTATCGTACGCCATCATCTGTACAGTG | + |
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Preference number: 6 (lower is better) Translates to: SSRITSNDSGGH*TSLSYAIICTV Trigger: CACTGTACAGATGATGGCGTACGATAAGCTGGTTCAGTGCCCACCCGAGTCATTCGACGTGATTCTGGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003442.9 ENSMUST00000109150.9 ENSMUST00000230490.2 |
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