Pregenerated sensors for CACNB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020882Ensembl transcript IDs: ENSMUST00000017552.13, ENSMUST00000092736.11, ENSMUST00000103144.10, ENSMUST00000107561.9, ENSMUST00000107562.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCATGGTCTCCACACCCAGGTGGCACGGAGATGTGGGGCTCAGATaGAGAGGGCCCCTCTCTCCTGATGGCAGCAGGCAGGGTATGCTG | + |
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Preference number: 1 (lower is better) Translates to: FMVSTPRWHGDVGLR*RGPLSPDGSRQGML Trigger: CAGCATACCCTGCCTGCTGCCATCAGGAGAGAGGGGCCCTCTGCATCTGAGCCCCACATCTCCGTGCCACCTGGGTGTGGAGACCATGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| 3UTR TCA 90 bp | GTGGCACGGAGATGTGGGGCTCAGATGCAGAGGGCCCCTCTCTCCTaGTGGCAGCAGGCAGGGTATGCTGTAGACAAAGCTCATTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: VARRCGAQMQRAPLS*WQQAGYAVDKAHSW Trigger: CCAGGAATGAGCTTTGTCTACAGCATACCCTGCCTGCTGCCATCAGGAGAGAGGGGCCCTCTGCATCTGAGCCCCACATCTCCGTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| 3UTR GCA 90 bp | CTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATaGAGTCCTAAGGGACCAGTCCCAGGGAGGCAGCACCAGCCAGTC | + |
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Preference number: 1 (lower is better) Translates to: LIWGPHQASSPTDRR*SPKGPVPGRQHQPV Trigger: GACTGGCTGGTGCTGCCTCCCTGGGACTGGTCCCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTCCACACCCAGGTGGCACGGAGATGTGGGGCTCAGATGCAGAGGGCCCCTCGCCTGCACCCAGCTCTaGTCCCCAAGGGTTTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: VSTPRWHGDVGLRCRGPLACTQL*SPRVSK Trigger: CTTGGAAACCCTTGGGGAGCAGAGCTGGGTGCAGGC...GAGGGGCCCTCTGCATCTGAGCCCCACATCTCCGTGCCACCTGGGTGTGGAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| 3UTR-3UTR CCA 90 bp | GTGGTCACCTCACGGGTACCAACACATAGAGCCTGTCCCCTGGGGCCTCAGGGTGAGAGCCCCCAAAGATaGGGAAAGGGGGCACTTCAG | + |
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Preference number: 2 (lower is better) Translates to: VVTSRVPTHRACPLGPQGESPQR*GKGALQ Trigger: CTGAAGTGCCCCCTTTCCCCATCTTTGGGGGCTCTC...ACCCTGAGGCCCCAGGGGACAGGCTCTATGTGTTGGTACCCGTGAGGTGACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| 3UTR-3UTR CCA 90 bp | AGACCCAAGGTCCTTAGGAAGCCCCTGGATGGTGGTCACCTCACGGGTACCAACAGGCAAGACACATCTTaGGTGGTGTGCCCCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: RPKVLRKPLDGGHLTGTNRQDTS*VVCPSA Trigger: GGCAGAGGGGCACACCACCCAAGATGTGTCTTGCCT...GTTGGTACCCGTGAGGTGACCACCATCCAGGGGCTTCCTAAGGACCTTGGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCTGCACCCAGCTCTGCTCCCCAAGGGTTTCCAAGCCGTGCCTTTCACCCTGTTATGTTATGGGATaGACATGGTGGGGGATCCCG | + |
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Preference number: 2 (lower is better) Translates to: AACTQLCSPRVSKPCLSPCYVMG*TWWGIP Trigger: CGGGATCCCCCACCATGTCCATCCCATAACATAACA...GGGTGAAAGGCACGGCTTGGAAACCCTTGGGGAGCAGAGCTGGGTGCAGGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| 3UTR-3UTR GCA 90 bp | GTGGTCACCTCACGGGTACCAACACATAGAGCCTGTCCCCTGGGGCCTCAGGGTGCAGCAGGCAGGGTATaGTGTAGACAAAGCTCATTC | + |
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Preference number: 2 (lower is better) Translates to: VVTSRVPTHRACPLGPQGAAGRV*CRQSSF Trigger: GAATGAGCTTTGTCTACAGCATACCCTGCCTGCTGC...ACCCTGAGGCCCCAGGGGACAGGCTCTATGTGTTGGTACCCGTGAGGTGACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| 3UTR-3UTR TCA 90 bp | GACCACAAAGTATTCATGGTCTCCACACCCAGGTGGCACGGAGATGTGGGGCTCCCTGCTTTCTTGCTATaGCCATGGAGGGCAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: DHKVFMVSTPRWHGDVGLPAFLL*PWRAES Trigger: GCTCTCTGCCCTCCATGGTCATAGCAAGAAAGCAGG...GAGCCCCACATCTCCGTGCCACCTGGGTGTGGAGACCATGAATACTTTGTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| 3UTR-3UTR GCA 90 bp | TATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCCTAAGGCTTCCTCATGTTCCCTaGACTCCAGGGTGGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: YGVPIRPQVQQTGDAVLRLPHVP*TPGWEE Trigger: TTCCTCCCACCCTGGAGTGCAGGGAACATGAGGAAG...CCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTGGCCGCAAAGGACAGAACTGCGGTTTTATATGTGGCAAAATATCTCTCGGACCTCCCAAGAGCTaGGATAATTACCACCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: GGGRKGQNCGFICGKISLGPPKS*DNYHQR Trigger: TCTTTGGTGGTAATTATCCCAGCTCTTGGGAGGTCC...GAGAGATATTTTGCCACATATAAAACCGCAGTTCTGTCCTTTGCGGCCACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| 3UTR GCA 72 bp | GGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATaGAGTCCTAAGGGACCAGTCCCAGGGAGGCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: GPHQASSPTDRR*SPKGPVPGRQH Trigger: GTGCTGCCTCCCTGGGACTGGTCCCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| 3UTR CCA 72 bp | GGGGCTACCATGGCCTCTCTTGGGGAAAGTGGACACTaGGGAAGGACAGGGTCACAAGAGGCAAATACAGAG | + |
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Preference number: 3 (lower is better) Translates to: GATMASLGESGH*GRTGSQEANTE Trigger: CTCTGTATTTGCCTCTTGTGACCCTGTCCTTCCCCAGTGTCCACTTTCCCCAAGAGAGGCCATGGTAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| 3UTR TCA 72 bp | CCACCAAAGAAACCCCAAGCTTTAAGCAAAGGCATCTaGAAACGAGGGACACAGCGCCCCCTGGAGGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: PPKKPQALSKGI*KRGTQRPLEAR Trigger: TCTTGCCTCCAGGGGGCGCTGTGTCCCTCGTTTTCAGATGCCTTTGCTTAAAGCTTGGGGTTTCTTTGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| 3UTR CCA 72 bp | CAGAGAATGCTGCTAGGAAACTGTTATGTTATGGGATaGACATGGTGGGGGATCCCGGGTCTGGGGGATTGG | + |
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Preference number: 3 (lower is better) Translates to: QRMLLGNCYVMG*TWWGIPGLGDW Trigger: CCAATCCCCCAGACCCGGGATCCCCCACCATGTCCATCCCATAACATAACAGTTTCCTAGCAGCATTCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| 3UTR GCA 72 bp | CATCTTGAGTTGCTCACTCCTCAAGGTTCTAGGACCTaGTTTCTTGCTATGACCATGGAGGGCAGAGAGCGC | + |
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Preference number: 3 (lower is better) Translates to: HLELLTPQGSRT*FLAMTMEGRER Trigger: GCGCTCTCTGCCCTCCATGGTCATAGCAAGAAAGCAGGTCCTAGAACCTTGAGGAGTGAGCAACTCAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR TCA 90 bp | GGGCAACATTGGCACAGGAGGTGGCGAGACAGGCGTGAGGTGCCCATCCCTGAGCTGACTTGCTGGAGCTaGGGCGGTTCTGGCGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GQHWHRRWRDRREVPIPELTCWS*GGSGAG Trigger: CCCTGCGCCAGAACCGCCTCAGCTCCAGCAAGTCAG...CTCAGGGATGGGCACCTCACGCCTGTCTCGCCACCTCCTGTGCCAATGTTGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR GCA 90 bp | AAAACGAGGGACACAGCGCCCCCTGGAGGCAAGACACATCTTGGGTGGTGTGCCGCCGGGCTGGTGGTGTaGCTCCCCCTGCAGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: KTRDTAPPGGKTHLGWCAAGLVV*LPLQGL Trigger: GAGACCCTGCAGGGGGAGGCACACCACCAGCCCGGC...GGCACACCACCCAAGATGTGTCTTGCCTCCAGGGGGCGCTGTGTCCCTCGTTTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CCA 90 bp | GAGGGCCCCTCTCTCCTGATGGCAGCAGGCAGGGTATGCTGTAGACAAAGCTCAGCCCTGCCGGGCTGGTaGTGTGCCTCCCCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: EGPSLLMAAGRVCCRQSSALPGW*CASPCR Trigger: CCTGCAGGGGGAGGCACACCACCAGCCCGGCAGGGC...TGAGCTTTGTCTACAGCATACCCTGCCTGCTGCCATCAGGAGAGAGGGGCCCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR GCA 90 bp | GGGCAACATTGGCACAGGAGGTGGCGAGACAGGCGTGAGGTGCCCATCCCTGAGGCTGGCAGCCAGAGCTaGGGTAGCCATGGTGCGGTT | + |
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Preference number: 4 (lower is better) Translates to: GQHWHRRWRDRREVPIPEAGSQS*GSHGAV Trigger: AACCGCACCATGGCTACCGCAGCTCTGGCTGCCAGC...CTCAGGGATGGGCACCTCACGCCTGTCTCGCCACCTCCTGTGCCAATGTTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CCA 90 bp | GTCTCCACACCCAGGTGGCACGGAGATGTGGGGCTCAGATGCAGAGGGCCCCTCGCTGTACTTGCCCTGTaGGCTGGGGTCGAAGACCTC | + |
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Preference number: 4 (lower is better) Translates to: VSTPRWHGDVGLRCRGPLAVLAL*AGVEDL Trigger: GAGGTCTTCGACCCCAGCCCACAGGGCAAGTACAGC...GAGGGGCCCTCTGCATCTGAGCCCCACATCTCCGTGCCACCTGGGTGTGGAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CCA 90 bp | GCAGCCTGCACCCAGCTCTGCTCCCCAAGGGTTTCCAAGCCGTGCCTTTCACCCGAGCTGAGGCGGTTCTaGCGCAGGGTCTGTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: AACTQLCSPRVSKPCLSPELRRF*RRVCSC Trigger: GCAGGAACAGACCCTGCGCCAGAACCGCCTCAGCTC...GGGTGAAAGGCACGGCTTGGAAACCCTTGGGGAGCAGAGCTGGGTGCAGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR GCA 90 bp | GACAGGAGATGCAGTCCTAAGGGACCAGTCCCAGGGAGGCAGCACCAGCCAGTCGCTGGCAGCCAGAGCTaGGGTAGCCATGGTGCGGTT | + |
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Preference number: 4 (lower is better) Translates to: DRRCSPKGPVPGRQHQPVAGSQS*GSHGAV Trigger: AACCGCACCATGGCTACCGCAGCTCTGGCTGCCAGC...GACTGGCTGGTGCTGCCTCCCTGGGACTGGTCCCTTAGGACTGCATCTCCTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR GCA 90 bp | GTCTCCACACCCAGGTGGCACGGAGATGTGGGGCTCAGATGCAGAGGGCCCCTCCCAGCTCATTCTTATTaGGCCCCAGAACCGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: VSTPRWHGDVGLRCRGPLPAHSY*APEPAH Trigger: GTGGGCCGGTTCTGGGGCGCAATAAGAATGAGCTGG...GAGGGGCCCTCTGCATCTGAGCCCCACATCTCCGTGCCACCTGGGTGTGGAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CCA 90 bp | GTCTCCACACCCAGGTGGCACGGAGATGTGGGGCTCAGATGCAGAGGGCCCCTCTTGGCTTTCTCGAGCTaGGCTAAGGCCTGGCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VSTPRWHGDVGLRCRGPLLAFSS*AKAWRS Trigger: AGAGCGCCAGGCCTTAGCCCAGCTCGAGAAAGCCAA...GAGGGGCCCTCTGCATCTGAGCCCCACATCTCCGTGCCACCTGGGTGTGGAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CCA 90 bp | GTGGTCACCTCACGGGTACCAACACATAGAGCCTGTCCCCTGGGGCCTCAGGGTCAGCAGCGGATTGGGTaGCGTGCTGCTAGGCGGATG | + |
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Preference number: 4 (lower is better) Translates to: VVTSRVPTHRACPLGPQGQQRIG*RAARRM Trigger: CATCCGCCTAGCAGCACGCCACCCAATCCGCTGCTG...ACCCTGAGGCCCCAGGGGACAGGCTCTATGTGTTGGTACCCGTGAGGTGACCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CCA 90 bp | GGGCAACATTGGCACAGGAGGTGGCGAGACAGGCGTGAGGTGCCCATCCCTGAGGGTACTCGTGCACACTaGCATGTTCCCCAGTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GQHWHRRWRDRREVPIPEGTRAH*HVPQWP Trigger: GGGCCACTGGGGAACATGCCAGTGTGCACGAGTACC...CTCAGGGATGGGCACCTCACGCCTGTCTCGCCACCTCCTGTGCCAATGTTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR GCA 90 bp | AGACCCAAGGTCCTTAGGAAGCCCCTGGATGGTGGTCACCTCACGGGTACCAACGTGTGGGGCGGCGGGTaGCAGTCACCACATCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RPKVLRKPLDGGHLTGTNVWGGG*QSPHLP Trigger: TGGGAGATGTGGTGACTGGCACCCGCCGCCCCACAC...GTTGGTACCCGTGAGGTGACCACCATCCAGGGGCTTCCTAAGGACCTTGGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CCA 90 bp | AGCCTGCACCCAGCTCTGCTCCCCAAGGGTTTCCAAGCCGTGCCTTTCACCCACGTACCTCAGCCAGGCTaGAACGCGTGTTGGAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: SLHPALLPKGFQAVPFTHVPQPG*NACWSA Trigger: AGCGCTCCAACACGCGTTCCAGCCTGGCTGAGGTAC...GTGGGTGAAAGGCACGGCTTGGAAACCCTTGGGGAGCAGAGCTGGGTGCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR TCA 90 bp | GTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCCTAAGGGACCAGCTGACTTGCTGGAGCTaGGGCGGTTCTGGCGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VPIRPQVQQTGDAVLRDQLTCWS*GGSGAG Trigger: CCCTGCGCCAGAACCGCCTCAGCTCCAGCAAGTCAG...CTGGTCCCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR TCA 90 bp | GACAGGAGATGCAGTCCTAAGGGACCAGTCCCAGGGAGGCAGCACCAGCCAGTCACTGGAGTTGTCACCTaGCTTGCTGGAGCTGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: DRRCSPKGPVPGRQHQPVTGVVT*LAGAEA Trigger: CGCCTCAGCTCCAGCAAGTCAGGTGACAACTCCAGT...GACTGGCTGGTGCTGCCTCCCTGGGACTGGTCCCTTAGGACTGCATCTCCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR CCA 90 bp | GACAGGAGATGCAGTCCTAAGGGACCAGTCCCAGGGAGGCAGCACCAGCCAGTCTTGGCTTTCTCGAGCTaGGCTAAGGCCTGGCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: DRRCSPKGPVPGRQHQPVLAFSS*AKAWRS Trigger: AGAGCGCCAGGCCTTAGCCCAGCTCGAGAAAGCCAA...GACTGGCTGGTGCTGCCTCCCTGGGACTGGTCCCTTAGGACTGCATCTCCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR TCA 90 bp | GCAGCCTGCACCCAGCTCTGCTCCCCAAGGGTTTCCAAGCCGTGCCTTTCACCCAGACACATCAGAGTCTaGTGGTCGGCTCGTGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: AACTQLCSPRVSKPCLSPRHIRV*WSARVG Trigger: TCCTACACGAGCCGACCATCAGACTCTGATGTGTCT...GGGTGAAAGGCACGGCTTGGAAACCCTTGGGGAGCAGAGCTGGGTGCAGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR TCA 90 bp | AGACCCAAGGTCCTTAGGAAGCCCCTGGATGGTGGTCACCTCACGGGTACCAACACGGTCCCACCAGGATaGTGGGCCTCATGGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: RPKVLRKPLDGGHLTGTNTVPPG*WASWKA Trigger: TGCCTTCCATGAGGCCCATCATCCTGGTGGGACCGT...GTTGGTACCCGTGAGGTGACCACCATCCAGGGGCTTCCTAAGGACCTTGGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR TCA 90 bp | TCGGACTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCATACATGGCGTGCTCCTaGGGCTGGGCCACCGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: SDLYGVPIRPQVQQTGDAYMACS*GWATAS Trigger: CGACGCGGTGGCCCAGCCTCAGGAGCACGCCATGTA...TGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAGTCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR GCA 90 bp | AGACCCAAGGTCCTTAGGAAGCCCCTGGATGGTGGTCACCTCACGGGTACCAACCGCAGGGTCTGTTCCTaGAGCAGACGAAGGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RPKVLRKPLDGGHLTGTNRRVCS*SRRRLS Trigger: GGACAGCCTTCGTCTGCTGCAGGAACAGACCCTGCG...GTTGGTACCCGTGAGGTGACCACCATCCAGGGGCTTCCTAAGGACCTTGGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR GCA 90 bp | CATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCCTAAGGGACCAGTCCCATCCAAGGCGACCAGCTaGAAGGTCCGGGCCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: HQASSPTDRRCSPKGPVPSKATS*KVRASS Trigger: CGAGCTGGCCCGGACCTTGCAGCTGGTCGCCTTGGA...TGGGACTGGTCCCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR GCA 90 bp | TCGGACTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAAGAAGGGGATGCGCTTaGCGTGGGGTGGCGGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: SDLYGVPIRPQVQQTGDARRGCA*RGVAAW Trigger: CCACGCCGCCACCCCACGGCAAGCGCATCCCCTTCT...TGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAGTCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR CCA 90 bp | GGGCAACATTGGCACAGGAGGTGGCGAGACAGGCGTGAGGTGCCCATCCCTGAGGACGTTTTAGAGAGCTaGGCTGGGTGGTTGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: GQHWHRRWRDRREVPIPEDVLES*AGWLMV Trigger: CACCATCAACCACCCAGCCCAGCTCTCTAAAACGTC...CTCAGGGATGGGCACCTCACGCCTGTCTCGCCACCTCCTGTGCCAATGTTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CCA 90 bp | CTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCCTGCGCTTGCCGTGGGGTaGCGGCGTGGTGACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: LIWGPHQASSPTDRRCSPALAVG*RRGDTA Trigger: AGCAGTGTCACCACGCCGCCACCCCACGGCAAGCGC...AGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR TCA 90 bp | AAAACGAGGGACACAGCGCCCCCTGGAGGCAAGACACATCTTGGGTGGTGTGCCTCCCGTCTGACCTTTTaGACCGCCCTTTCCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: KTRDTAPPGGKTHLGWCASRLTF*TALSSC Trigger: GCAAGAGGAAAGGGCGGTTCAAAAGGTCAGACGGGA...GGCACACCACCCAAGATGTGTCTTGCCTCCAGGGGGCGCTGTGTCCCTCGTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR TCA 90 bp | GAGGGCCCCTCTCTCCTGATGGCAGCAGGCAGGGTATGCTGTAGACAAAGCTCAACTGGAGTTGTCACCTaGCTTGCTGGAGCTGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: EGPSLLMAAGRVCCRQSSTGVVT*LAGAEA Trigger: CGCCTCAGCTCCAGCAAGTCAGGTGACAACTCCAGT...TGAGCTTTGTCTACAGCATACCCTGCCTGCTGCCATCAGGAGAGAGGGGCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR TCA 90 bp | AGACCCAAGGTCCTTAGGAAGCCCCTGGATGGTGGTCACCTCACGGGTACCAACGTTTGCTGGGGTTGTTaGGGACGGAGCGTTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RPKVLRKPLDGGHLTGTNVCWGC*GRSVWP Trigger: TGGCCAAACGCTCCGTCCTCAACAACCCCAGCAAAC...GTTGGTACCCGTGAGGTGACCACCATCCAGGGGCTTCCTAAGGACCTTGGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR GCA 90 bp | TGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCCTAAGGGACGCAGGGTCTGTTCCTaGAGCAGACGAAGGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: WGPHQASSPTDRRCSPKGRRVCS*SRRRLS Trigger: GGACAGCCTTCGTCTGCTGCAGGAACAGACCCTGCG...TCCCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR GCA 90 bp | GTAGGCATTCCCCCATCCACCTACAGCAGTTTAGGGAAAAACCTACAGCTGGGGTCCAAGGCGACCAGCTaGAAGGTCCGGGCCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: VGIPPSTYSSLGKNLQLGSKATS*KVRASS Trigger: CGAGCTGGCCCGGACCTTGCAGCTGGTCGCCTTGGA...CCCCAGCTGTAGGTTTTTCCCTAAACTGCTGTAGGTGGATGGGGGAATGCCTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR GCA 90 bp | GTAGGCATTCCCCCATCCACCTACAGCAGTTTAGGGAAAAACCTACAGCTGGGGGGCCAGGTGGGTGGTTaGTGGGGTAAAGGCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: VGIPPSTYSSLGKNLQLGGQVGG*WGKGLG Trigger: CCCCAGGCCTTTACCCCAGCAACCACCCACCTGGCC...CCCCAGCTGTAGGTTTTTCCCTAAACTGCTGTAGGTGGATGGGGGAATGCCTAC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR GCA 90 bp | ATTGGGGAAGATTCAGCGGGCTCTCTTCAGGAAAAGCACCCAACCTTTCCCAAGTGGTGTGCCTCCCCCTaGAGGGTCTCCAGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IGEDSAGSLQEKHPTFPKWCASP*RVSRPW Trigger: CCAGGGCCTGGAGACCCTGCAGGGGGAGGCACACCA...CTTGGGAAAGGTTGGGTGCTTTTCCTGAAGAGAGCCCGCTGAATCTTCCCCAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR CCA 90 bp | AGACCCAAGGTCCTTAGGAAGCCCCTGGATGGTGGTCACCTCACGGGTACCAACGACTCTGCTGAGCCCTaGCGGACGAAGCTGTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RPKVLRKPLDGGHLTGTNDSAEP*RTKLLD Trigger: ATCCAACAGCTTCGTCCGCCAGGGCTCAGCAGAGTC...GTTGGTACCCGTGAGGTGACCACCATCCAGGGGCTTCCTAAGGACCTTGGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR CCA 90 bp | CAACAGACAGGAGATGCAGTCCTAAGGGACCAGTCCCAGGGAGGCAGCACCAGCAGGCACCTCATCCCCTaGAGACGGATTGTAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QQTGDAVLRDQSQGGSTSRHLIP*RRIVAN Trigger: GTTGGCTACAATCCGTCTCCAGGGGATGAGGTGCCT...GCTGGTGCTGCCTCCCTGGGACTGGTCCCTTAGGACTGCATCTCCTGTCTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTCACCTCACGGGTACCAACACATAGAGCCTGTCCCCTGGGGCCTCAGGGTATTTCTGCTTCTGTTTaGCACTGGCAGGGGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVTSRVPTHRACPLGPQGISASV*HWQGVW Trigger: CCACACCCCCTGCCAGTGCCAAACAGAAGCAGAAAT...ACCCTGAGGCCCCAGGGGACAGGCTCTATGTGTTGGTACCCGTGAGGTGACCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR CCA 90 bp | GACAGGAGATGCAGTCCTAAGGGACCAGTCCCAGGGAGGCAGCACCAGCCAGTCGACGTTTTAGAGAGCTaGGCTGGGTGGTTGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DRRCSPKGPVPGRQHQPVDVLES*AGWLMV Trigger: CACCATCAACCACCCAGCCCAGCTCTCTAAAACGTC...GACTGGCTGGTGCTGCCTCCCTGGGACTGGTCCCTTAGGACTGCATCTCCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
||
| CDS-3UTR CCA 90 bp | GTAGGCATTCCCCCATCCACCTACAGCAGTTTAGGGAAAAACCTACAGCTGGGGGCCTGCCCGGCCAGGTaGGTGGTTGCTGGGGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGIPPSTYSSLGKNLQLGACPAR*VVAGVK Trigger: CTTTACCCCAGCAACCACCCACCTGGCCGGGCAGGC...CCCCAGCTGTAGGTTTTTCCCTAAACTGCTGTAGGTGGATGGGGGAATGCCTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR TCA 90 bp | CAACAGACAGGAGATGCAGTCCTAAGGGACCAGTCCCAGGGAGGCAGCACCAGCAGACACATCAGAGTCTaGTGGTCGGCTCGTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QQTGDAVLRDQSQGGSTSRHIRV*WSARVG Trigger: TCCTACACGAGCCGACCATCAGACTCTGATGTGTCT...GCTGGTGCTGCCTCCCTGGGACTGGTCCCTTAGGACTGCATCTCCTGTCTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
||
| CDS-3UTR TCA 90 bp | GTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCCTAAGGGACCAGGTTTGCTGGGGTTGTTaGGGACGGAGCGTTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPIRPQVQQTGDAVLRDQVCWGC*GRSVWP Trigger: TGGCCAAACGCTCCGTCCTCAACAACCCCAGCAAAC...CTGGTCCCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
||
| CDS-3UTR CCA 90 bp | AGACCCAAGGTCCTTAGGAAGCCCCTGGATGGTGGTCACCTCACGGGTACCAACGGCGGACGAAGCTGTTaGATGTTGTATCCGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: RPKVLRKPLDGGHLTGTNGGRSC*MLYPRT Trigger: CGTCCTCGGATACAACATCCAACAGCTTCGTCCGCC...GTTGGTACCCGTGAGGTGACCACCATCCAGGGGCTTCCTAAGGACCTTGGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR CCA 90 bp | GGACTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTGAGCTGAGGCGGTTCTaGCGCAGGGTCTGTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLIWGPHQASSPTDRRCSELRRF*RRVCSC Trigger: GCAGGAACAGACCCTGCGCCAGAACCGCCTCAGCTC...ACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
||
| CDS-3UTR CCA 90 bp | AAAACGAGGGACACAGCGCCCCCTGGAGGCAAGACACATCTTGGGTGGTGTGCCCTCCCAGACTGGAACTaGAGTTGTCACCTGACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KTRDTAPPGGKTHLGWCALPDWN*SCHLTC Trigger: GCAAGTCAGGTGACAACTCCAGTTCCAGTCTGGGAG...GGCACACCACCCAAGATGTGTCTTGCCTCCAGGGGGCGCTGTGTCCCTCGTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR CCA 90 bp | TGGGGAAGATTCAGCGGGCTCTCTTCAGGAAAAGCACCCAACCTTTCCCAAGTAGCTTCTGTTTGGCACTaGCAGGGGGTGTGGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: WGRFSGLSSGKAPNLSQVASVWH*QGVWGG Trigger: GCCGCCCCACACCCCCTGCCAGTGCCAAACAGAAGC...TACTTGGGAAAGGTTGGGTGCTTTTCCTGAAGAGAGCCCGCTGAATCTTCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR CCA 90 bp | CATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCCTAAGGGACCAGTCCCAGTACCTCAGCCAGGCTaGAACGCGTGTTGGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HQASSPTDRRCSPKGPVPVPQPG*NACWSA Trigger: AGCGCTCCAACACGCGTTCCAGCCTGGCTGAGGTAC...TGGGACTGGTCCCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
||
| CDS-3UTR CCA 90 bp | GGACTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCAGCAGCGGATTGGGTaGCGTGCTGCTAGGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GLIWGPHQASSPTDRRCSQQRIG*RAARRM Trigger: CATCCGCCTAGCAGCACGCCACCCAATCCGCTGCTG...ACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
||
| CDS-3UTR TCA 90 bp | GGACTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTACGGTCCCACCAGGATaGTGGGCCTCATGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLIWGPHQASSPTDRRCSTVPPG*WASWKA Trigger: TGCCTTCCATGAGGCCCATCATCCTGGTGGGACCGT...ACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
||
| CDS-3UTR CCA 90 bp | GACCACAAAGTATTCATGGTCTCCACACCCAGGTGGCACGGAGATGTGGGGCTCAGGCACCTCATCCCCTaGAGACGGATTGTAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DHKVFMVSTPRWHGDVGLRHLIP*RRIVAN Trigger: GTTGGCTACAATCCGTCTCCAGGGGATGAGGTGCCT...GAGCCCCACATCTCCGTGCCACCTGGGTGTGGAGACCATGAATACTTTGTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR CCA 90 bp | TGGGGAAGATTCAGCGGGCTCTCTTCAGGAAAAGCACCCAACCTTTCCCAAGTACAGGTGGGTGGTTGCTaGGGTAAAGGCCTGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGRFSGLSSGKAPNLSQVQVGGC*GKGLGA Trigger: AGCCCCCAGGCCTTTACCCCAGCAACCACCCACCTG...TACTTGGGAAAGGTTGGGTGCTTTTCCTGAAGAGAGCCCGCTGAATCTTCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR CCA 90 bp | GGACTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTGTGAGCACCTGTACCTaGAGGTTGGAGACGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLIWGPHQASSPTDRRCSVSTCT*RLETGA Trigger: TGCCCCCGTCTCCAACCTCCAGGTACAGGTGCTCAC...ACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
||
| CDS-3UTR CCA 90 bp | AGATTCAGCGGGCTCTCTTCAGGAAAAGCACCCAACCTTTCCCAAGTACCCCTGGATCTCTTGGGAAGGTaGGTAAGGGCCCCGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: RFSGLSSGKAPNLSQVPLDLLGR*VRAPGH Trigger: ATGTCCCGGGGCCCTTACCCACCTTCCCAAGAGATC...CAGGGGTACTTGGGAAAGGTTGGGTGCTTTTCCTGAAGAGAGCCCGCTGAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR GCA 90 bp | TGGGGAAGATTCAGCGGGCTCTCTTCAGGAAAAGCACCCAACCTTTCCCAAGTATCCTCTTGCTGTACTTaGCCTGTGGGCTGGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WGRFSGLSSGKAPNLSQVSSCCT*PVGWGR Trigger: TCGACCCCAGCCCACAGGGCAAGTACAGCAAGAGGA...TACTTGGGAAAGGTTGGGTGCTTTTCCTGAAGAGAGCCCGCTGAATCTTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR GCA 90 bp | GAGGGCCCCTCTCTCCTGATGGCAGCAGGCAGGGTATGCTGTAGACAAAGCTCACTGCCATCAAACCGATaGTTGAGGAAGTCAAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: EGPSLLMAAGRVCCRQSSLPSNR*LRKSNN Trigger: GTTGTTTGACTTCCTCAAGCATCGGTTTGATGGCAG...TGAGCTTTGTCTACAGCATACCCTGCCTGCTGCCATCAGGAGAGAGGGGCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR CCA 90 bp | TCGGACTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCACTCCCAGACTGGAACTaGAGTTGTCACCTGACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SDLYGVPIRPQVQQTGDALPDWN*SCHLTC Trigger: GCAAGTCAGGTGACAACTCCAGTTCCAGTCTGGGAG...TGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAGTCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
||
| CDS-3UTR CCA 90 bp | AGACCCAAGGTCCTTAGGAAGCCCCTGGATGGTGGTCACCTCACGGGTACCAACCAGGCATCTTCCAATTaGTTCTCGTCCAGGATTATG | + |
|
Preference number: 4 (lower is better) Translates to: RPKVLRKPLDGGHLTGTNQASSN*FSSRIM Trigger: CATAATCCTGGACGAGAACCAATTGGAAGATGCCTG...GTTGGTACCCGTGAGGTGACCACCATCCAGGGGCTTCCTAAGGACCTTGGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR CCA 90 bp | AGTCCCCAGTCCCACCAAAAACCACAGACACCAGACGCTGCCGCTCACCACGTTCAGGCATCTTCCAATTaGTTCTCGTCCAGGATTATG | + |
|
Preference number: 4 (lower is better) Translates to: SPQSHQKPQTPDAAAHHVQASSN*FSSRIM Trigger: CATAATCCTGGACGAGAACCAATTGGAAGATGCCTG...AACGTGGTGAGCGGCAGCGTCTGGTGTCTGTGGTTTTTGGTGGGACTGGGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCCTAAGGGACATCAAACCGATGCTTaGGGAAGTCAAACAACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WGPHQASSPTDRRCSPKGHQTDA*GSQTTL Trigger: AAGCGTTGTTTGACTTCCTCAAGCATCGGTTTGATG...TCCCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
||
| CDS-3UTR GCA 90 bp | AGATTCAGCGGGCTCTCTTCAGGAAAAGCACCCAACCTTTCCCAAGTACCCCTGCAGCTTCTCCGAGGCTaGTATTTGGACATTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RFSGLSSGKAPNLSQVPLQLLRG*YLDIEV Trigger: CACCTCAATGTCCAAATAGCAGCCTCGGAGAAGCTG...CAGGGGTACTTGGGAAAGGTTGGGTGCTTTTCCTGAAGAGAGCCCGCTGAATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR GCA 90 bp | TCGGACTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCACAGCTTCTCCGAGGCTaGTATTTGGACATTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDLYGVPIRPQVQQTGDAQLLRG*YLDIEV Trigger: CACCTCAATGTCCAAATAGCAGCCTCGGAGAAGCTG...TGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAGTCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
||
| CDS-3UTR CCA 90 bp | AAGGACCTCCCAAGAGCTGGGATAATTACCACCAAAGAAACCCCAAGCTTTAAGAGCTGGGCTAAGGCCTaGCGCTCTGCCTCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KDLPRAGIITTKETPSFKSWAKA*RSASFL Trigger: AAGGAAGGAGGCAGAGCGCCAGGCCTTAGCCCAGCT...CTTAAAGCTTGGGGTTTCTTTGGTGGTAATTATCCCAGCTCTTGGGAGGTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR TCA 90 bp | TGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCCTAAGGGACTGCTATTTGGACATTaGGGTGTTTGGATTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: WGPHQASSPTDRRCSPKGLLFGH*GVWIET Trigger: AGTCTCAATCCAAACACCTCAATGTCCAAATAGCAG...TCCCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
||
| CDS-3UTR TCA 90 bp | GTAGGCATTCCCCCATCCACCTACAGCAGTTTAGGGAAAAACCTACAGCTGGGGCATCAAACCGATGCTTaGGGAAGTCAAACAACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VGIPPSTYSSLGKNLQLGHQTDA*GSQTTL Trigger: AAGCGTTGTTTGACTTCCTCAAGCATCGGTTTGATG...CCCCAGCTGTAGGTTTTTCCCTAAACTGCTGTAGGTGGATGGGGGAATGCCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR GCA 90 bp | CCAAGAGCTGGGATAATTACCACCAAAGAAACCCCAAGCTTTAAGCAAAGGCATACCGCCCTTTCCTCTTaGTGTACTTGCCCTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRAGIITTKETPSFKQRHTALSS*CTCPVG Trigger: GCCCACAGGGCAAGTACAGCAAGAGGAAAGGGCGGT...ATGCCTTTGCTTAAAGCTTGGGGTTTCTTTGGTGGTAATTATCCCAGCTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS-3UTR GCA 90 bp | GGACTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCTGCCATCAAACCGATaGTTGAGGAAGTCAAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLIWGPHQASSPTDRRCSLPSNR*LRKSNN Trigger: GTTGTTTGACTTCCTCAAGCATCGGTTTGATGGCAG...ACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
||
| CDS-3UTR TCA 90 bp | ATTGGGGAAGATTCAGCGGGCTCTCTTCAGGAAAAGCACCCAACCTTTCCCAAGCTGCTATTTGGACATTaGGGTGTTTGGATTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: IGEDSAGSLQEKHPTFPKLLFGH*GVWIET Trigger: AGTCTCAATCCAAACACCTCAATGTCCAAATAGCAG...CTTGGGAAAGGTTGGGTGCTTTTCCTGAAGAGAGCCCGCTGAATCTTCCCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS CCA 90 bp | TGGCCCGGTCCAGCGGCTGGTCCCCGGAAGCAAGGTAGGGTCCCATaGCGTGCTCCTGAGGCTGGGCCACCGCGTCGCCTCCCCGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WPGPAAGPRKQGRVP*RAPEAGPPRRLPAV Trigger: CACCGCGGGGAGGCGACGCGGTGGCCCAGCCTCAGGAGCACGCCATGGGACCCTACCTTGCTTCCGGGGACCAGCCGCTGGACCGGGCCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103144.10 |
||
| CDS TCA 90 bp | CATGGCGTGCTCCTGAGGCTGGGCCACCGCGTCGCCTCCCCGCGGTaGGGCCTCCAGCCCGCCCCAGAAGCTGAGATTTCTCCTGAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: HGVLLRLGHRVASPR*GLQPAPEAEISPER Trigger: TCGCTCAGGAGAAATCTCAGCTTCTGGGGCGGGCTGGAGGCCTCACCGCGGGGAGGCGACGCGGTGGCCCAGCCTCAGGAGCACGCCATG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 ENSMUST00000107562.2 |
||
| CDS GCA 90 bp | GGGTCCCTGGAGGTTGGAGACGGGGGCAGGGCTGGCAGCCAGAGCTaGGGTAGCCATGGTGCGGTTCAGCAGCGGATTGGGTGGCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSLEVGDGGRAGSQS*GSHGAVQQRIGWRA Trigger: AGCACGCCACCCAATCCGCTGCTGAACCGCACCATGGCTACCGCAGCTCTGGCTGCCAGCCCTGCCCCCGTCTCCAACCTCCAGGGACCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS GCA 90 bp | GGGTGTCAGCATCAAAGGTGTCTTGGCGGGATAGCGCCCGCAGGGTaGCTGCCCGGCCAGGTGGGTGGTTGCTGGGGTAAAGGCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GCQHQRCLGGIAPAG*LPGQVGGCWGKGLG Trigger: CCCCAGGCCTTTACCCCAGCAACCACCCACCTGGCCGGGCAGGCACCCTGCGGGCGCTATCCCGCCAAGACACCTTTGATGCTGACACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017552.13 ENSMUST00000103144.10 |
||
| CDS GCA 90 bp | CTGTACCTGGAGGTTGGAGACGGGGGCAGGGCTGGCAGCCAGAGCTaGGGTAGCCATGGTGCGGTTCAGCAGCGGATTGGGTGGCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LYLEVGDGGRAGSQS*GSHGAVQQRIGWRA Trigger: AGCACGCCACCCAATCCGCTGCTGAACCGCACCATGGCTACCGCAGCTCTGGCTGCCAGCCCTGCCCCCGTCTCCAACCTCCAGGTACAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 ENSMUST00000107562.2 |
||
| CDS GCA 90 bp | AGCGGATGTAGACGCCTTGTCCCCAGCCCTCCAGCTCATTCTTATTaGGCCCCAGAACCGGCCCACCACCCTCCGCACAGTAGCGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGCRRLVPSPPAHSY*APEPAHHPPHSSGP Trigger: AGGCCCGCTACTGTGCGGAGGGTGGTGGGCCGGTTCTGGGGCGCAATAAGAATGAGCTGGAGGGCTGGGGACAAGGCGTCTACATCCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017552.13 ENSMUST00000103144.10 |
||
| CDS-3UTR CAA 90 bp | AGCCTGCACCCAGCTCTGCTCCCCAAGGGTTTCCAAGCCGTGCCTTTCACCCACCGGTTCAGCAGCGGATaGGGTGGCGTGCTGCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLHPALLPKGFQAVPFTHRFSSG*GGVLLG Trigger: GCCTAGCAGCACGCCACCCAATCCGCTGCTGAACCG...GTGGGTGAAAGGCACGGCTTGGAAACCCTTGGGGAGCAGAGCTGGGTGCAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
||
| CDS CCA 90 bp | CCCCAGAAGCTGAGATTTCTCCTGAGCGAGGTGAGCACCTGTACCTaGAGGTTGGAGACGGGGGCAGGGCTGGCAGCCAGAGCTGCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PQKLRFLLSEVSTCT*RLETGAGLAARAAV Trigger: TACCGCAGCTCTGGCTGCCAGCCCTGCCCCCGTCTCCAACCTCCAGGTACAGGTGCTCACCTCGCTCAGGAGAAATCTCAGCTTCTGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 ENSMUST00000107562.2 |
||
| CDS GCA 90 bp | CCTGACTTGCTGGAGCTGAGGCGGTTCTGGCGCAGGGTCTGTTCCTaGAGCAGACGAAGGCTGTCCAGTTTGACCGGGCTGGGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PDLLELRRFWRRVCS*SRRRLSSLTGLGMK Trigger: CTTCATCCCCAGCCCGGTCAAACTGGACAGCCTTCGTCTGCTGCAGGAACAGACCCTGCGCCAGAACCGCCTCAGCTCCAGCAAGTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 ENSMUST00000107562.2 |
||
| CDS GCA 90 bp | TGTCCACACACGAGTCTCCCGGCTCCGTGTAGGCAGAATTTCGGCTaGCGGGGGTGTCAGCATCAAAGGTGTCTTGGCGGGATAGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CPHTSLPAPCRQNFG*RGCQHQRCLGGIAP Trigger: GGGCGCTATCCCGCCAAGACACCTTTGATGCTGACACCCCCGGCAGCCGAAATTCTGCCTACACGGAGCCGGGAGACTCGTGTGTGGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017552.13 ENSMUST00000103144.10 |
||
| CDS CCA 90 bp | CGTGCTCTGTCGATTTCTGCTTCTGTTTGGCACTGGCAGGGGGTGTaGGGCGGCGGGTGCCAGTCACCACATCTCCCAGACTGGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: RALSISASVWHWQGV*GGGCQSPHLPDWNW Trigger: CCAGTTCCAGTCTGGGAGATGTGGTGACTGGCACCCGCCGCCCCACACCCCCTGCCAGTGCCAAACAGAAGCAGAAATCGACAGAGCACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017552.13 ENSMUST00000107562.2 |
||
| CDS CCA 90 bp | GGGGGCACGTGCTCTGTCTTCTTAAAGAAGGGGATGCGCTTGCCGTaGGGTGGCGGCGTGGTGACACTGCTCACGCTAGTCTTGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGTCSVFLKKGMRLP*GGGVVTLLTLVLAE Trigger: CTCAGCCAAGACTAGCGTGAGCAGTGTCACCACGCCGCCACCCCACGGCAAGCGCATCCCCTTCTTTAAGAAGACAGAGCACGTGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 |
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| CDS-3UTR CAA 90 bp | GTGGTCACCTCACGGGTACCAACACATAGAGCCTGTCCCCTGGGGCCTCAGGGTCGAAGGCTGTCCAGTTaGACCGGGCTGGGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VVTSRVPTHRACPLGPQGRRLSS*TGLGMK Trigger: CTTCATCCCCAGCCCGGTCAAACTGGACAGCCTTCG...ACCCTGAGGCCCCAGGGGACAGGCTCTATGTGTTGGTACCCGTGAGGTGACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | GGGCAACATTGGCACAGGAGGTGGCGAGACAGGCGTGAGGTGCCCATCCCTGAGTGTTTGCTGGGGTTGTaGAGGACGGAGCGTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GQHWHRRWRDRREVPIPECLLGL*RTERLA Trigger: GGCCAAACGCTCCGTCCTCAACAACCCCAGCAAACA...CTCAGGGATGGGCACCTCACGCCTGTCTCGCCACCTCCTGTGCCAATGTTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | CAACAGACAGGAGATGCAGTCCTAAGGGACCAGTCCCAGGGAGGCAGCACCAGCCGAAGGCTGTCCAGTTaGACCGGGCTGGGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QQTGDAVLRDQSQGGSTSRRLSS*TGLGMK Trigger: CTTCATCCCCAGCCCGGTCAAACTGGACAGCCTTCG...GCTGGTGCTGCCTCCCTGGGACTGGTCCCTTAGGACTGCATCTCCTGTCTGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR CAA 90 bp | GGGCAACATTGGCACAGGAGGTGGCGAGACAGGCGTGAGGTGCCCATCCCTGAGCGAAGCTGTTGGATGTaGTATCCGAGGACGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQHWHRRWRDRREVPIPERSCWM*YPRTYS Trigger: GGAGTACGTCCTCGGATACAACATCCAACAGCTTCG...CTCAGGGATGGGCACCTCACGCCTGTCTCGCCACCTCCTGTGCCAATGTTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | AGCCTGCACCCAGCTCTGCTCCCCAAGGGTTTCCAAGCCGTGCCTTTCACCCACAGGCTGGAACGCGTGTaGGAGCGCTCAATGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: SLHPALLPKGFQAVPFTHRLERV*ERSMMM Trigger: CATCATCATTGAGCGCTCCAACACGCGTTCCAGCCT...GTGGGTGAAAGGCACGGCTTGGAAACCCTTGGGGAGCAGAGCTGGGTGCAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | GTCTCCACACCCAGGTGGCACGGAGATGTGGGGCTCAGATGCAGAGGGCCCCTCAGCCTCTGCAGTACCTaGGGAGATGTGATCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VSTPRWHGDVGLRCRGPLSLCST*GDVILM Trigger: CATCAAGATCACATCTCCCAAGGTACTGCAGAGGCT...GAGGGGCCCTCTGCATCTGAGCCCCACATCTCCGTGCCACCTGGGTGTGGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | AAAACGAGGGACACAGCGCCCCCTGGAGGCAAGACACATCTTGGGTGGTGTGCCTCCAGCTCATTCTTATaGCGCCCCAGAACCGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KTRDTAPPGGKTHLGWCASSSFL*RPRTGP Trigger: TGGGCCGGTTCTGGGGCGCAATAAGAATGAGCTGGA...GGCACACCACCCAAGATGTGTCTTGCCTCCAGGGGGCGCTGTGTCCCTCGTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | TCGGACTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAAAGAAGGGGATGCGCTaGCCGTGGGGTGGCGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SDLYGVPIRPQVQQTGDAKKGMR*PWGGGV Trigger: CACGCCGCCACCCCACGGCAAGCGCATCCCCTTCTT...TGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAGTCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR CAA 90 bp | GGACTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCGGTTCAGCAGCGGATaGGGTGGCGTGCTGCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLIWGPHQASSPTDRRCSRFSSG*GGVLLG Trigger: GCCTAGCAGCACGCCACCCAATCCGCTGCTGAACCG...ACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR CAA 90 bp | GCAGCCTGCACCCAGCTCTGCTCCCCAAGGGTTTCCAAGCCGTGCCTTTCACCCTCAATGATGATGTGTTaGCTGGGGTTGTTGAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: AACTQLCSPRVSKPCLSPSMMMC*LGLLRT Trigger: CGTCCTCAACAACCCCAGCAAACACATCATCATTGA...GGGTGAAAGGCACGGCTTGGAAACCCTTGGGGAGCAGAGCTGGGTGCAGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | GTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCCTAAGGGACCAGAGGCTGGAACGCGTGTaGGAGCGCTCAATGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: VPIRPQVQQTGDAVLRDQRLERV*ERSMMM Trigger: CATCATCATTGAGCGCTCCAACACGCGTTCCAGCCT...CTGGTCCCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR CAA 90 bp | ATTGGGGAAGATTCAGCGGGCTCTCTTCAGGAAAAGCACCCAACCTTTCCCAAGCGGCCCCGGTTCCTGTaGTCGGTCATCTCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IGEDSAGSLQEKHPTFPKRPRFL*SVISSS Trigger: TGAGGAGGAGATGACCGACAACAGGAACCGGGGCCG...CTTGGGAAAGGTTGGGTGCTTTTCCTGAAGAGAGCCCGCTGAATCTTCCCCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS TCA 90 bp | AGCTGTTGGATGTTGTATCCGAGGACGTACTCCCGTCTGACCTTTTaGACCGCCCTTTCCTCTTGCTGTACTTGCCCTGTGGGCTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SCWMLYPRTYSRLTF*TALSSCCTCPVGWG Trigger: ACCCCAGCCCACAGGGCAAGTACAGCAAGAGGAAAGGGCGGTTCAAAAGGTCAGACGGGAGTACGTCCTCGGATACAACATCCAACAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107562.2 |
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| CDS TCA 90 bp | GCGGACGAAGCTGTTGGATGTTGTATCCGAGGACGTACTCCCGTCTaGCCTTTTGAACCGCCCTTTCCTCTTGCTGTACTTGCCCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ADEAVGCCIRGRTPV*PFEPPFPLAVLALW Trigger: CCACAGGGCAAGTACAGCAAGAGGAAAGGGCGGTTCAAAAGGTCAGACGGGAGTACGTCCTCGGATACAACATCCAACAGCTTCGTCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107562.2 |
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| CDS-3UTR CAA 90 bp | AGATTCAGCGGGCTCTCTTCAGGAAAAGCACCCAACCTTTCCCAAGTACCCCTGCTCCATAGGGATCTCTaGGGAAGGTGGGTAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RFSGLSSGKAPNLSQVPLLHRDL*GRWVRA Trigger: GGCCCTTACCCACCTTCCCAAGAGATCCCTATGGAG...CAGGGGTACTTGGGAAAGGTTGGGTGCTTTTCCTGAAGAGAGCCCGCTGAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | GGACTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTTGTTTGCTGGGGTTGTaGAGGACGGAGCGTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLIWGPHQASSPTDRRCSCLLGL*RTERLA Trigger: GGCCAAACGCTCCGTCCTCAACAACCCCAGCAAACA...ACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR CAA 90 bp | AAAACGAGGGACACAGCGCCCCCTGGAGGCAAGACACATCTTGGGTGGTGTGCCGATTGTAGCCAACATTaGTCCGAACAGCAAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KTRDTAPPGGKTHLGWCADCSQH*SEQQKP Trigger: TGGCTTTTGCTGTTCGGACAAATGTTGGCTACAATC...GGCACACCACCCAAGATGTGTCTTGCCTCCAGGGGGCGCTGTGTCCCTCGTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | TATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCCTAAGGATGTGTAGGAAGTCCTaGGGCTCAAAGGTGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YGVPIRPQVQQTGDAVLRMCRKS*GSKVMA Trigger: GGCCATCACCTTTGAGCCCAAGGACTTCCTACACAT...CCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR CAA 90 bp | TATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCCTAAGGATGTGTTTGCTGGGGTaGTTGAGGACGGAGCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: YGVPIRPQVQQTGDAVLRMCLLG*LRTERL Trigger: CAAACGCTCCGTCCTCAACAACCCCAGCAAACACAT...CCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR CAA 90 bp | TGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCCTAAGGGAAGCCTCTGCAGTACCTaGGGAGATGTGATCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: WGPHQASSPTDRRCSPKGSLCST*GDVILM Trigger: CATCAAGATCACATCTCCCAAGGTACTGCAGAGGCT...TCCCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR CAA 90 bp | AAGGACCTCCCAAGAGCTGGGATAATTACCACCAAAGAAACCCCAAGCTTTAAGGCGGATGTAGACGCCTaGTCCCCAGCCCTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KDLPRAGIITTKETPSFKADVDA*SPALQL Trigger: GAGCTGGAGGGCTGGGGACAAGGCGTCTACATCCGC...CTTAAAGCTTGGGGTTTCTTTGGTGGTAATTATCCCAGCTCTTGGGAGGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | ATTGGGGAAGATTCAGCGGGCTCTCTTCAGGAAAAGCACCCAACCTTTCCCAAGCTCCCGTCTGACCTTTaGAACCGCCCTTTCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IGEDSAGSLQEKHPTFPKLPSDL*NRPFLL Trigger: CAAGAGGAAAGGGCGGTTCAAAAGGTCAGACGGGAG...CTTGGGAAAGGTTGGGTGCTTTTCCTGAAGAGAGCCCGCTGAATCTTCCCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | TGGGGAAGATTCAGCGGGCTCTCTTCAGGAAAAGCACCCAACCTTTCCCAAGTATGGCGGACGAAGCTGTaGGATGTTGTATCCGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: WGRFSGLSSGKAPNLSQVWRTKL*DVVSED Trigger: GTCCTCGGATACAACATCCAACAGCTTCGTCCGCCA...TACTTGGGAAAGGTTGGGTGCTTTTCCTGAAGAGAGCCCGCTGAATCTTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | TATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCCTAAGGTCAATGATGATGTGTTaGCTGGGGTTGTTGAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: YGVPIRPQVQQTGDAVLRSMMMC*LGLLRT Trigger: CGTCCTCAACAACCCCAGCAAACACATCATCATTGA...CCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR CAA 90 bp | TCGGACTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCACTCCGAGGCTGCTATTaGGACATTGAGGTGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SDLYGVPIRPQVQQTGDALRGCY*DIEVFG Trigger: TCCAAACACCTCAATGTCCAAATAGCAGCCTCGGAG...TGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAGTCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR CAA 90 bp | AGACCCAAGGTCCTTAGGAAGCCCCTGGATGGTGGTCACCTCACGGGTACCAACATCCACCAGTCATTATaGTACTTCTCCTTGATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RPKVLRKPLDGGHLTGTNIHQSL*YFSLMC Trigger: ACACATCAAGGAGAAGTACAATAATGACTGGTGGAT...GTTGGTACCCGTGAGGTGACCACCATCCAGGGGCTTCCTAAGGACCTTGGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | CCAGAGAATGCTGCTAGGAAACTGTTATGTTATGGGATGGACATGGTGGGGGATATGTGTAGGAAGTCCTaGGGCTCAAAGGTGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PENAARKLLCYGMDMVGDMCRKS*GSKVMA Trigger: GGCCATCACCTTTGAGCCCAAGGACTTCCTACACAT...ATCCCCCACCATGTCCATCCCATAACATAACAGTTTCCTAGCAGCATTCTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | CCAGAGAATGCTGCTAGGAAACTGTTATGTTATGGGATGGACATGGTGGGGGATATGTGTTTGCTGGGGTaGTTGAGGACGGAGCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PENAARKLLCYGMDMVGDMCLLG*LRTERL Trigger: CAAACGCTCCGTCCTCAACAACCCCAGCAAACACAT...ATCCCCCACCATGTCCATCCCATAACATAACAGTTTCCTAGCAGCATTCTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | TATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTCCTAAGGATCCACCAGTCATTATaGTACTTCTCCTTGATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: YGVPIRPQVQQTGDAVLRIHQSL*YFSLMC Trigger: ACACATCAAGGAGAAGTACAATAATGACTGGTGGAT...CCTTAGGACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR CAA 90 bp | GGACTTATATGGGGTCCCCATCAGGCCTCAAGTCCAACAGACAGGAGATGCAGTTTATTGTACTTCTCCTaGATGTGTAGGAAGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLIWGPHQASSPTDRRCSLLYFS*MCRKSL Trigger: CAAGGACTTCCTACACATCAAGGAGAAGTACAATAA...ACTGCATCTCCTGTCTGTTGGACTTGAGGCCTGATGGGGACCCCATATAAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107561.9 |
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| CDS-3UTR CAA 90 bp | TGGGGAAGATTCAGCGGGCTCTCTTCAGGAAAAGCACCCAACCTTTCCCAAGTATTATTGTACTTCTCCTaGATGTGTAGGAAGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WGRFSGLSSGKAPNLSQVLLYFS*MCRKSL Trigger: CAAGGACTTCCTACACATCAAGGAGAAGTACAATAA...TACTTGGGAAAGGTTGGGTGCTTTTCCTGAAGAGAGCCCGCTGAATCTTCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS-3UTR CAA 90 bp | CCAAGAGCTGGGATAATTACCACCAAAGAAACCCCAAGCTTTAAGCAAAGGCATCTCCGAGGCTGCTATTaGGACATTGAGGTGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRAGIITTKETPSFKQRHLRGCY*DIEVFG Trigger: TCCAAACACCTCAATGTCCAAATAGCAGCCTCGGAG...ATGCCTTTGCTTAAAGCTTGGGGTTTCTTTGGTGGTAATTATCCCAGCTCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017552.13 |
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| CDS CCA 72 bp | CCAGCGGCTGGTCCCCGGAAGCAAGGTAGGGTCCCATaGCGTGCTCCTGAGGCTGGGCCACCGCGTCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PAAGPRKQGRVP*RAPEAGPPRRL Trigger: GAGGCGACGCGGTGGCCCAGCCTCAGGAGCACGCCATGGGACCCTACCTTGCTTCCGGGGACCAGCCGCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103144.10 |
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| CDS GCA 72 bp | GAGGTTGGAGACGGGGGCAGGGCTGGCAGCCAGAGCTaGGGTAGCCATGGTGCGGTTCAGCAGCGGATTGGG | + |
|
Preference number: 6 (lower is better) Translates to: EVGDGGRAGSQS*GSHGAVQQRIG Trigger: CCCAATCCGCTGCTGAACCGCACCATGGCTACCGCAGCTCTGGCTGCCAGCCCTGCCCCCGTCTCCAACCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 ENSMUST00000107562.2 |
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| CDS CCA 72 bp | TTTCGGCTGCCGGGGGTGTCAGCATCAAAGGTGTCTTaGCGGGATAGCGCCCGCAGGGTGCCTGCCCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FRLPGVSASKVS*RDSARRVPARP Trigger: TGGCCGGGCAGGCACCCTGCGGGCGCTATCCCGCCAAGACACCTTTGATGCTGACACCCCCGGCAGCCGAAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017552.13 ENSMUST00000103144.10 |
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| CDS GCA 72 bp | CATCAAAGGTGTCTTGGCGGGATAGCGCCCGCAGGGTaGCTGCCCGGCCAGGTGGGTGGTTGCTGGGGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: HQRCLGGIAPAG*LPGQVGGCWGK Trigger: TTTACCCCAGCAACCACCCACCTGGCCGGGCAGGCACCCTGCGGGCGCTATCCCGCCAAGACACCTTTGATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017552.13 ENSMUST00000103144.10 |
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| CDS GCA 72 bp | CTGGAGCTGAGGCGGTTCTGGCGCAGGGTCTGTTCCTaGAGCAGACGAAGGCTGTCCAGTTTGACCGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LELRRFWRRVCS*SRRRLSSLTGL Trigger: CAGCCCGGTCAAACTGGACAGCCTTCGTCTGCTGCAGGAACAGACCCTGCGCCAGAACCGCCTCAGCTCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 ENSMUST00000107562.2 |
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| CDS GCA 72 bp | AGACGCCTTGTCCCCAGCCCTCCAGCTCATTCTTATTaGGCCCCAGAACCGGCCCACCACCCTCCGCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: RRLVPSPPAHSY*APEPAHHPPHS Trigger: ACTGTGCGGAGGGTGGTGGGCCGGTTCTGGGGCGCAATAAGAATGAGCTGGAGGGCTGGGGACAAGGCGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017552.13 ENSMUST00000103144.10 |
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| CDS CCA 72 bp | GCACGTGCTCTGTCGATTTCTGCTTCTGTTTGGCACTaGCAGGGGGTGTGGGGCGGCGGGTGCCAGTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: ARALSISASVWH*QGVWGGGCQSP Trigger: TGGTGACTGGCACCCGCCGCCCCACACCCCCTGCCAGTGCCAAACAGAAGCAGAAATCGACAGAGCACGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017552.13 ENSMUST00000107562.2 |
||
| CDS CAA 72 bp | CTGTGGGCTGGGGTCGAAGACCTCCATAGGGATCTCTaGGGAAGGTGGGTAAGGGCCCCGGGACATGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LWAGVEDLHRDL*GRWVRAPGHAA Trigger: AGCGGCATGTCCCGGGGCCCTTACCCACCTTCCCAAGAGATCCCTATGGAGGTCTTCGACCCCAGCCCACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107562.2 |
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| CDS CAA 72 bp | AGAGCTGCGGTAGCCATGGTGCGGTTCAGCAGCGGATaGGGTGGCGTGCTGCTAGGCGGATGTGTGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RAAVAMVRFSSG*GGVLLGGCVAF Trigger: GAAGGCCACACATCCGCCTAGCAGCACGCCACCCAATCCGCTGCTGAACCGCACCATGGCTACCGCAGCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 ENSMUST00000107562.2 |
||
| CDS CAA 90 bp | GTACTTGCCCTGTGGGCTGGGGTCGAAGACCTCCATAGGGATCTCTaGGGAAGGTGGGTAAGGGCCCCGGGACATGCCGCTCTTCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VLALWAGVEDLHRDL*GRWVRAPGHAALLD Trigger: GTCCAGAAGAGCGGCATGTCCCGGGGCCCTTACCCACCTTCCCAAGAGATCCCTATGGAGGTCTTCGACCCCAGCCCACAGGGCAAGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107562.2 |
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| CDS CCA 72 bp | GGGGTCGAAGACCTCCATAGGGATCTCTTGGGAAGGTaGGTAAGGGCCCCGGGACATGCCGCTCTTCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GVEDLHRDLLGR*VRAPGHAALLD Trigger: GTCCAGAAGAGCGGCATGTCCCGGGGCCCTTACCCACCTTCCCAAGAGATCCCTATGGAGGTCTTCGACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107562.2 |
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| CDS CCA 72 bp | TCGATTTCTGCTTCTGTTTGGCACTGGCAGGGGGTGTaGGGCGGCGGGTGCCAGTCACCACATCTCCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SISASVWHWQGV*GGGCQSPHLPD Trigger: GTCTGGGAGATGTGGTGACTGGCACCCGCCGCCCCACACCCCCTGCCAGTGCCAAACAGAAGCAGAAATCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017552.13 ENSMUST00000107562.2 |
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| CDS CCA 72 bp | CTGAGATTTCTCCTGAGCGAGGTGAGCACCTGTACCTaGAGGTTGGAGACGGGGGCAGGGCTGGCAGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: LRFLLSEVSTCT*RLETGAGLAAR Trigger: TCTGGCTGCCAGCCCTGCCCCCGTCTCCAACCTCCAGGTACAGGTGCTCACCTCGCTCAGGAGAAATCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 ENSMUST00000107562.2 |
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| CDS CAA 90 bp | TTCTGGCGCAGGGTCTGTTCCTGCAGCAGACGAAGGCTGTCCAGTTaGACCGGGCTGGGGATGAAGCCAACCTCGCAGCCTTCCTTCACC | + |
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Preference number: 6 (lower is better) Translates to: FWRRVCSCSRRRLSS*TGLGMKPTSQPSFT Trigger: GGTGAAGGAAGGCTGCGAGGTTGGCTTCATCCCCAGCCCGGTCAAACTGGACAGCCTTCGTCTGCTGCAGGAACAGACCCTGCGCCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 ENSMUST00000107562.2 |
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| CDS GCA 72 bp | GTGACACTGCTCACGCTAGTCTTGGCTGAGCCGCCGTaGTCCCCTAGCTCTGCCTCCTCCTCCTCTAACTCT | + |
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Preference number: 6 (lower is better) Translates to: VTLLTLVLAEPP*SPSSASSSSNS Trigger: AGAGTTAGAGGAGGAGGAGGCAGAGCTAGGGGAGCACGGCGGCTCAGCCAAGACTAGCGTGAGCAGTGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 |
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| CDS CCA 72 bp | GGTTTGGTCTTGGCTTTCTCGAGCTGGGCTAAGGCCTaGCGCTCTGCCTCCTTCCTTAAGGCTTCCCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: GLVLAFSSWAKA*RSASFLKASRS Trigger: GGACCGGGAAGCCTTAAGGAAGGAGGCAGAGCGCCAGGCCTTAGCCCAGCTCGAGAAAGCCAAGACCAAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 ENSMUST00000107562.2 |
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| CDS CAA 72 bp | AGGGTCTGTTCCTGCAGCAGACGAAGGCTGTCCAGTTaGACCGGGCTGGGGATGAAGCCAACCTCGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: RVCSCSRRRLSS*TGLGMKPTSQP Trigger: AGGCTGCGAGGTTGGCTTCATCCCCAGCCCGGTCAAACTGGACAGCCTTCGTCTGCTGCAGGAACAGACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 ENSMUST00000107562.2 |
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| CDS CCA 72 bp | TGTCTTCTTAAAGAAGGGGATGCGCTTGCCGTGGGGTaGCGGCGTGGTGACACTGCTCACGCTAGTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: CLLKEGDALAVG*RRGDTAHASLG Trigger: GCCAAGACTAGCGTGAGCAGTGTCACCACGCCGCCACCCCACGGCAAGCGCATCCCCTTCTTTAAGAAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 |
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| CDS CCA 72 bp | TGCTCTGTCTTCTTAAAGAAGGGGATGCGCTTGCCGTaGGGTGGCGGCGTGGTGACACTGCTCACGCTAGTC | + |
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Preference number: 6 (lower is better) Translates to: CSVFLKKGMRLP*GGGVVTLLTLV Trigger: GACTAGCGTGAGCAGTGTCACCACGCCGCCACCCCACGGCAAGCGCATCCCCTTCTTTAAGAAGACAGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 |
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| CDS CCA 72 bp | TGTAGGACTCTGCTGAGCCCTGGCGGACGAAGCTGTTaGATGTTGTATCCGAGGACGTACTCCCGTCTGACC | + |
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Preference number: 6 (lower is better) Translates to: CRTLLSPGGRSC*MLYPRTYSRLT Trigger: GGTCAGACGGGAGTACGTCCTCGGATACAACATCCAACAGCTTCGTCCGCCAGGGCTCAGCAGAGTCCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107562.2 |
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| CDS CAA 72 bp | GTGCCAGTCACCACATCTCCCAGACTGGAACTGGAGTaGTCACCTGACTTGCTGGAGCTGAGGCGGTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: VPVTTSPRLELE*SPDLLELRRFW Trigger: CCAGAACCGCCTCAGCTCCAGCAAGTCAGGTGACAACTCCAGTTCCAGTCTGGGAGATGTGGTGACTGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 ENSMUST00000107562.2 |
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| CDS CAA 90 bp | AAGCTGTTGGATGTTGTATCCGAGGACGTACTCCCGTCTGACCTTTaGAACCGCCCTTTCCTCTTGCTGTACTTGCCCTGTGGGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: KLLDVVSEDVLPSDL*NRPFLLLYLPCGLG Trigger: CCCCAGCCCACAGGGCAAGTACAGCAAGAGGAAAGGGCGGTTCAAAAGGTCAGACGGGAGTACGTCCTCGGATACAACATCCAACAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107562.2 |
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| CDS TCA 72 bp | ATGTTGTATCCGAGGACGTACTCCCGTCTGACCTTTTaGACCGCCCTTTCCTCTTGCTGTACTTGCCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: MLYPRTYSRLTF*TALSSCCTCPV Trigger: CACAGGGCAAGTACAGCAAGAGGAAAGGGCGGTTCAAAAGGTCAGACGGGAGTACGTCCTCGGATACAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107562.2 |
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| CDS CAA 72 bp | GATGTTGTATCCGAGGACGTACTCCCGTCTGACCTTTaGAACCGCCCTTTCCTCTTGCTGTACTTGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: DVVSEDVLPSDL*NRPFLLLYLPC Trigger: ACAGGGCAAGTACAGCAAGAGGAAAGGGCGGTTCAAAAGGTCAGACGGGAGTACGTCCTCGGATACAACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107562.2 |
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| CDS CAA 72 bp | GCACCTCATCCCCTGGAGACGGATTGTAGCCAACATTaGTCCGAACAGCAAAAGCCACTGGTTTGGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: APHPLETDCSQH*SEQQKPLVWSW Trigger: CCAAGACCAAACCAGTGGCTTTTGCTGTTCGGACAAATGTTGGCTACAATCCGTCTCCAGGGGATGAGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 ENSMUST00000107562.2 |
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| CDS CAA 90 bp | CCTGTACAGGCACCTCATCCCCTGGAGACGGATTGTAGCCAACATTaGTCCGAACAGCAAAAGCCACTGGTTTGGTCTTGGCTTTCTCGA | + |
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Preference number: 6 (lower is better) Translates to: PVQAPHPLETDCSQH*SEQQKPLVWSWLSR Trigger: TCGAGAAAGCCAAGACCAAACCAGTGGCTTTTGCTGTTCGGACAAATGTTGGCTACAATCCGTCTCCAGGGGATGAGGTGCCTGTACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017552.13 ENSMUST00000092736.11 ENSMUST00000103144.10 ENSMUST00000107561.9 ENSMUST00000107562.2 |
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