RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNA1S (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026407

Ensembl transcript IDs: ENSMUST00000112064.8, ENSMUST00000112068.10, ENSMUST00000160641.8, ENSMUST00000161865.2

Found 635 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTaGCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACA +
Preference number: 1 (lower is better)
Translates to: LADEEKGRPCPPMAS*LVEVVPDHRYSVHT
Trigger: TGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
3UTR TCA 90 bp GTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTATaGCAGACAGACCCTGGCACCGATCAGGCCTTTGTGAATGGCCAC +
Preference number: 1 (lower is better)
Translates to: VRPGDFNVQLDRVAL*QTDPGTDQAFVNGH
Trigger: GTGGCCATTCACAAAGGCCTGATCGGTGCCAGGGTCTGTCTGTCATAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
3UTR TCA 90 bp ATGGAAGAGGAGCCATGGGAACACATAGCCATAAACTACTGCCACTaGGATTCTAGTTGGCGTTGGCGGTGGACTCTGGCCAAAGTCACA +
Preference number: 1 (lower is better)
Translates to: MEEEPWEHIAINYCH*DSSWRWRWTLAKVT
Trigger: TGTGACTTTGGCCAGAGTCCACCGCCAACGCCAACTAGAATCTCAGTGGCAGTAGTTTATGGCTATGTGTTCCCATGGCTCCTCTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
3UTR CCA 90 bp GGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTaGCTCTGGTGTAACCAGGGTGTGGCATTTCTTCTAATGCCATCA +
Preference number: 1 (lower is better)
Translates to: GGLWPKSQGYSFETG*LWCNQGVAFLLMPS
Trigger: TGATGGCATTAGAAGAAATGCCACACCCTGGTTACACCAGAGCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
3UTR TCA 90 bp TGTAACCAGGGTGTGGCATTTCTTCTAATGCCATCAGAGGGAAAGTaGAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGTTCTCTGAGA +
Preference number: 1 (lower is better)
Translates to: CNQGVAFLLMPSEGK*RWPGTLLQGPGSLR
Trigger: TCTCAGAGAACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCTGATGGCATTAGAAGAAATGCCACACCCTGGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
3UTR CCA 90 bp TGTGGCATTTCTTCTAATGCCATCAGAGGGAAAGTGAAGATGGCCTaGTACTCTTCTGCAAGGCCCAGGTTCTCTGAGAAAGGGGGTAGA +
Preference number: 1 (lower is better)
Translates to: CGISSNAIRGKVKMA*YSSARPRFSEKGGR
Trigger: TCTACCCCCTTTCTCAGAGAACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCTGATGGCATTAGAAGAAATGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
3UTR-3UTR TCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCATACAGCTGGCTACTaGGGGGCCAGGGGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: ILLLADEEKGRPCPPMASHTAGY*GARGGC
Trigger: GCAGCCTCCCCTGGCCCCTCAGTAGCCAGCTGTATG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
3UTR-3UTR TCA 90 bp TGGCTCTGGTGTAACCAGGGTGTGGCATTTCTTCTAATGCCATCAGAGGGAAAGCATACAGCTGGCTACTaGGGGGCCAGGGGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: WLWCNQGVAFLLMPSEGKHTAGY*GARGGC
Trigger: GCAGCCTCCCCTGGCCCCTCAGTAGCCAGCTGTATG...CTTTCCCTCTGATGGCATTAGAAGAAATGCCACACCCTGGTTACACCAGAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
3UTR-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCACTCCAGCACTTTCTaGCTTTTGGTCATGGTATTT +
Preference number: 2 (lower is better)
Translates to: ILLLADEEKGRPCPPMASHSSTF*LLVMVF
Trigger: AAATACCATGACCAAAAGCCAGAAAGTGCTGGAGTG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
3UTR-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCACACTCCAGCACTTTCTaGCTTTTGGTCATGGTATTT +
Preference number: 2 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPHSSTF*LLVMVF
Trigger: AAATACCATGACCAAAAGCCAGAAAGTGCTGGAGTG...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
3UTR-3UTR TCA 90 bp GTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGGATAGAGTGGCTTTATaGCAGACAGACCCTGGCACC +
Preference number: 2 (lower is better)
Translates to: VGGGLWPKSQGYSFETGWDRVAL*QTDPGT
Trigger: GGTGCCAGGGTCTGTCTGTCATAAAGCCACTCTATC...CCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
3UTR-3UTR GCA 90 bp AATGCCATCAGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGCAAGCAGAAGCCAGGTaGCAAAGTCAGGCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: NAIRGKVKMAWYSSARPRQAEAR*QSQAWR
Trigger: TCTCCAGGCCTGACTTTGGCACCTGGCTTCTGCTTG...CCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCTGATGGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
3UTR-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTCACTCCAGCACTTTCTaGCTTTTGGTCATGGTATTT +
Preference number: 2 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAHSSTF*LLVMVF
Trigger: AAATACCATGACCAAAAGCCAGAAAGTGCTGGAGTG...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
3UTR-3UTR TCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTACCGATCAGGCCTTTGTaGATGGCCACACAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALPIRPL*MATQAL
Trigger: CAGGGCTTGTGTGGCCATTCACAAAGGCCTGATCGG...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
3UTR CCA 72 bp GGCCCTGCCCACCCATGGCCTCCTGCCTGGTTGAGGTaGTTCCCGACCACCGCTACTCAGTCCATACAGCTG +
Preference number: 3 (lower is better)
Translates to: GPAHPWPPAWLR*FPTTATQSIQL
Trigger: CAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGCCATGGGTGGGCAGGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
3UTR CCA 72 bp GGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTaGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGG +
Preference number: 3 (lower is better)
Translates to: GGSRPPLLSPYS*LLRGQGRLLSW
Trigger: CCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
3UTR GCA 72 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTaGCCACCCATGGCCTCCTGCCTGGTTGAGGTGGTT +
Preference number: 3 (lower is better)
Translates to: ILLLADEEKGRP*PPMASCLVEVV
Trigger: AACCACCTCAACCAGGCAGGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
3UTR CCA 72 bp ACAGACAGACCCTGGCACCGATCAGGCCTTTGTGAATaGCCACACAAGCCCTGCCGAATCCTGCTTCTTGCT +
Preference number: 3 (lower is better)
Translates to: TDRPWHRSGLCE*PHKPCRILLLA
Trigger: AGCAAGAAGCAGGATTCGGCAGGGCTTGTGTGGCCATTCACAAAGGCCTGATCGGTGCCAGGGTCTGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
3UTR-3UTR CAA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCAGCACTTTCTGGCTTTaGGTCATGGTATTTCTAAGC +
Preference number: 3 (lower is better)
Translates to: ILLLADEEKGRPCPPMASSTFWL*VMVFLS
Trigger: GCTTAGAAATACCATGACCAAAAGCCAGAAAGTGCT...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
3UTR-3UTR CAA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGAGCACTTTCTGGCTTTaGGTCATGGTATTTCTAAGC +
Preference number: 3 (lower is better)
Translates to: CRILLLADEEKGRPCPPMSTFWL*VMVFLS
Trigger: GCTTAGAAATACCATGACCAAAAGCCAGAAAGTGCT...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
3UTR-3UTR CAA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGAGCACTTTCTGGCTTTaGGTCATGGTATTTCTAAGC +
Preference number: 3 (lower is better)
Translates to: LRWFPTTATQSIQLATEGSTFWL*VMVFLS
Trigger: GCTTAGAAATACCATGACCAAAAGCCAGAAAGTGCT...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
3UTR TCA 72 bp GGTGTGGCATTTCTTCTAATGCCATCAGAGGGAAAGTaGAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGT +
Preference number: 3 (lower is better)
Translates to: GVAFLLMPSEGK*RWPGTLLQGPG
Trigger: ACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCTGATGGCATTAGAAGAAATGCCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
3UTR TCA 72 bp GGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTATaGCAGACAGACCCTGGCACCGATCAGGCCTTTGTG +
Preference number: 3 (lower is better)
Translates to: GDFNVQLDRVAL*QTDPGTDQAFV
Trigger: CACAAAGGCCTGATCGGTGCCAGGGTCTGTCTGTCATAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
3UTR CCA 72 bp TCTTCTAATGCCATCAGAGGGAAAGTGAAGATGGCCTaGTACTCTTCTGCAAGGCCCAGGTTCTCTGAGAAA +
Preference number: 3 (lower is better)
Translates to: SSNAIRGKVKMA*YSSARPRFSEK
Trigger: TTTCTCAGAGAACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCTGATGGCATTAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGGGACCACCTGAAGACTaGGCACCCCCGACACCAGCC +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRGPPED*APPTPA
Trigger: GGCTGGTGTCGGGGGTGCCCAGTCTTCAGGTGGTCC...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTGCCCAGGGGCGACATaGCTCCCGACTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRCPGAT*LPTPPA
Trigger: TGCTGGTGGAGTCGGGAGCCATGTCGCCCCTGGGCA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGAGCCGGCTCCTTTGCTaGTCATGGGGGCCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRSRLLC*SWGPCW
Trigger: CCAACACGGCCCCCATGAGCAGCAAAGGAGCCGGCT...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR GCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGCCAAGCCGGCTCCTTTaGTGCTCATGGGGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRPSRLL*CSWGPC
Trigger: ACACGGCCCCCATGAGCAGCAAAGGAGCCGGCTTGG...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCTCGGCCAGAGGGCGTaGTCGGGGGCTCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASLGQRA*SGAHWD
Trigger: ATCCCAGTGAGCCCCCGACCACGCCCTCTGGCCGAG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTGGAGTCGGCCCGGATaGGATCCTCAGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASWSRPG*DPQRPG
Trigger: CCCTGGCCGCTGAGGATCCCATCCGGGCCGACTCCA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCGAGGCCCTGCAGGGCTaGCTGAGGGGTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASEALQG*LRGPSL
Trigger: CAGAGAAGGACCCCTCAGTCAGCCCTGCAGGGCCTC...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAATGTCCACAGCAGGGTaGGCACACCCTCCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPMSTAG*AHPPPG
Trigger: ACCGGGCGGAGGGTGTGCGCACCCTGCTGTGGACAT...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCGGACCACCTGAAGACTaGGCACCCCCGACACCAGCC +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASGPPED*APPTPA
Trigger: GGCTGGTGTCGGGGGTGCCCAGTCTTCAGGTGGTCC...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGACGAGCAGGGCAATGTaGAACAGGGGGAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRTSRAM*NRGSMA
Trigger: GGCCATGCTCCCCCTGTTCCACATTGCCCTGCTCGT...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCCCAGGGGCGACATaGCTCCCGACTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPCPGAT*LPTPPA
Trigger: TGCTGGTGGAGTCGGGAGCCATGTCGCCCCTGGGCA...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTGCCCAGGGGCGACATaGCTCCCGACTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASCPGAT*LPTPPA
Trigger: TGCTGGTGGAGTCGGGAGCCATGTCGCCCCTGGGCA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTGGTCGGGGGCTCACTaGGATCTCGGGCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRWSGAH*DLGLIF
Trigger: GAAGATGAGCCCGAGATCCCAGTGAGCCCCCGACCA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCTGGAGTCGGCCCGGATaGGATCCTCAGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSWSRPG*DPQRPG
Trigger: CCCTGGCCGCTGAGGATCCCATCCGGGCCGACTCCA...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTGGAGTCGGCCCGGATaGGATCCTCAGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMWSRPG*DPQRPG
Trigger: CCCTGGCCGCTGAGGATCCCATCCGGGCCGACTCCA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGGGGGAAGGAGGCACCTaGCCTTCAGGCATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRGEGGT*PSGIPL
Trigger: GAGAGGAATGCCTGAAGGCCAGGTGCCTCCTTCCCC...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGGCATCTGCCAGGGCCTaGCCTGTTGCCATGACGAAG +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRASARA*PVAMTK
Trigger: CTTCGTCATGGCAACAGGCCAGGCCCTGGCAGATGC...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTCTGCCTGGGAGAGCTaGCACGGGGAAGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASSAWES*HGEGGT
Trigger: GGTGCCTCCTTCCCCGTGCCAGCTCTCCCAGGCAGA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR TCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGAGTTGTCGAAGTGGGTaGTGCCGTGGTTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRSCRSG*CRGWVL
Trigger: CAGGACCCAACCACGGCATCACCCACTTCGACAACT...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCACGAGGCCCATGGAGATaGGGGACACAGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPRGPWR*GTQPPP
Trigger: TGGTGGTGGCTGTGTCCCTCATCTCCATGGGCCTCG...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCCCCCTGTGGCACACCTaGAGAGCAGCAGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSPLWHT*RAAARP
Trigger: AGGCCGTGCTGCTGCTCTTCAGGTGTGCCACAGGGG...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCCCCTGTGGCACACCTaGAGAGCAGCAGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMPLWHT*RAAARP
Trigger: AGGCCGTGCTGCTGCTCTTCAGGTGTGCCACAGGGG...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGGTCTTTGGTTGGCCATaGCAGGGGGCAGAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRVFGWP*QGAESW
Trigger: CCAACTCTCTGCCCCCTGTCATGGCCAACCAAAGAC...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTGGGTGCCTGGGTTCTaGGGGAAGTCCTCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRWVPGF*GKSSKK
Trigger: CTTCTTGGAGGACTTCCCTCAGAACCCAGGCACCCA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGAGGCCCTGCAGGGCTaGCTGAGGGGTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSEALQG*LRGPSL
Trigger: CAGAGAAGGACCCCTCAGTCAGCCCTGCAGGGCCTC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATCTGCTGTGAGGTCCTaGGGCCCTGCAGGGCTGACT +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPSAVRS*GPAGLT
Trigger: AGTCAGCCCTGCAGGGCCTCAGGACCTCACAGCAGA...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGGAGCAAGAGGGTGGGTaGCTGGGTTCTGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLREQEGG*LGSEGS
Trigger: ACTTCCCTCAGAACCCAGGCACCCACCCTCTTGCTC...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTGTCATCCTCTGGCATaGGCAGGTACACTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRCHPLA*AGTLPG
Trigger: CCCTGGCAGTGTACCTGCCCATGCCAGAGGATGACA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGATGGACATGAAGTACTaGCGCAGGCCCAGCCCGTAC +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRMDMKY*RRPSPY
Trigger: GTACGGGCTGGGCCTGCGCCAGTACTTCATGTCCAT...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTCACCCGTCAGGACCTaGAAGACACTGATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRSPVRT*KTLMRA
Trigger: GGCCCTCATCAGTGTCTTCCAGGTCCTGACGGGTGA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACCTCGGCCAGAGGGCGTaGTCGGGGGCTCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHLGQRA*SGAHWD
Trigger: ATCCCAGTGAGCCCCCGACCACGCCCTCTGGCCGAG...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGGCGTCCCGTCCACCATaGCGATCTTCCCGAACATCT +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRASRPP*RSSRTS
Trigger: AGATGTTCGGGAAGATCGCCATGGTGGACGGGACGC...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGAGCGGATGGAGTTaGGCAGTGAGGCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPWSGWS*AVRPPG
Trigger: ACCTGGTGGCCTCACTGCTCAACTCCATCCGCTCCA...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTCCCCTGTGGCACACCTaGAGAGCAGCAGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAPLWHT*RAAARP
Trigger: AGGCCGTGCTGCTGCTCTTCAGGTGTGCCACAGGGG...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGAGGAAGTTGTCCACTTaGCCAAACAGGCCTCCCGTC +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRRKLST*PNRPPV
Trigger: GACGGGAGGCCTGTTTGGTCAAGTGGACAACTTCCT...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACGAGGCCCTGCAGGGCTaGCTGAGGGGTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHEALQG*LRGPSL
Trigger: CAGAGAAGGACCCCTCAGTCAGCCCTGCAGGGCCTC...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCTCTGCTGTGAGGTCCTaGGGCCCTGCAGGGCTGACT +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSSAVRS*GPAGLT
Trigger: AGTCAGCCCTGCAGGGCCTCAGGACCTCACAGCAGA...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCCAAGCCGGCTCCTTTaGTGCTCATGGGGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMPSRLL*CSWGPC
Trigger: ACACGGCCCCCATGAGCAGCAAAGGAGCCGGCTTGG...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR GCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAGCAGGATCTCCAGGATaGCGCTGCACACCACGAAGC +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPAGSPG*RCTPRS
Trigger: GCTTCGTGGTGTGCAGCGGCATCCTGGAGATCCTGC...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCGCAGGATCTCCAGGATaGCGCTGCACACCACGAAGC +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASAGSPG*RCTPRS
Trigger: GCTTCGTGGTGTGCAGCGGCATCCTGGAGATCCTGC...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGGTGAGGCCACCAGGTTaGTCAGCGATGTCCAGTACT +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRVRPPG*SAMSST
Trigger: AGTACTGGACATCGCTGAGCAACCTGGTGGCCTCAC...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGCTCCGGGATGGGCACTaGTTTCTCTTTCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRLRDGH*FLFQLQ
Trigger: CTGCAGCTGAAAGAGAAAGCAGTGCCCATCCCGGAG...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTATGTCCACAGCAGGGTaGGCACACCCTCCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAMSTAG*AHPPPG
Trigger: ACCGGGCGGAGGGTGTGCGCACCCTGCTGTGGACAT...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACATGTCCACAGCAGGGTaGGCACACCCTCCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHMSTAG*AHPPPG
Trigger: ACCGGGCGGAGGGTGTGCGCACCCTGCTGTGGACAT...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTTGTTCCGGTTTATCTaGGTCCCGTCCACCATGGCG +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRLFRFI*VPSTMA
Trigger: CGCCATGGTGGACGGGACGCAGATAAACCGGAACAA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGGTGGATCTCAGGAGCTaGCTCTTCCTCTATGGTCCG +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRVDLRS*LFLYGP
Trigger: CGGACCATAGAGGAAGAGGCAGCTCCTGAGATCCAC...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGCAGGGCCTGGCCTGTTaGCATGACGAAGTTAGCATC +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRQGLAC*HDEVSI
Trigger: GATGCTAACTTCGTCATGGCAACAGGCCAGGCCCTG...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGATGGGTCAACCAGAGTaGCTGGTTGTGGTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRMGQPE*LVVVLR
Trigger: TCGGAGCACCACAACCAGCCACTCTGGTTGACCCAT...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTTCCTCATCGTCCCCTaGGAAGTCAGCCGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRFLIVP*EVSRRV
Trigger: TACCCTTCGGCTGACTTCCCAGGGGACGATGAGGAA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTGGTCGGGGGCTCACTaGGATCTCGGGCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASWSGAH*DLGLIF
Trigger: GAAGATGAGCCCGAGATCCCAGTGAGCCCCCGACCA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATCTTCACCACGGAGATaGCGCTGGACTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPSSPRR*RWTRGP
Trigger: TGGGCCTCGAGTCCAGCGCCATCTCCGTGGTGAAGA...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTCAGGTCTCCAGAGATaGCACGGTGGATCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRSGLQR*HGGSQE
Trigger: CTCCTGAGATCCACCGTGCCATCTCTGGAGACCTGA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTCCATTCCACGATGCTaGTGCAGGCCTTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASSIPRC*CRPSSG
Trigger: CCCTGAGGAAGGCCTGCATCAGCATCGTGGAATGGA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR TCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAAGTTGTCGAAGTGGGTaGTGCCGTGGTTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPSCRSG*CRGWVL
Trigger: CAGGACCCAACCACGGCATCACCCACTTCGACAACT...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTGGAGCGGATGGAGTTaGGCAGTGAGGCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMWSGWS*AVRPPG
Trigger: ACCTGGTGGCCTCACTGCTCAACTCCATCCGCTCCA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAGGACGCAGCTCTATCTaGGTGGGGTCTCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPGRSSI*VGSPSL
Trigger: CAAGGATGGAGACCCCACTCAGATAGAGCTGCGTCC...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCCCCTGTGGCACACCTaGAGAGCAGCAGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGPLWHT*RAAARP
Trigger: AGGCCGTGCTGCTGCTCTTCAGGTGTGCCACAGGGG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGCTCCAAGAAGACTGGTaGCTCCAGCTCTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRLQEDW*LQLFHL
Trigger: GAGATGGAAGAGCTGGAGTCACCAGTCTTCTTGGAG...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTGGGTGCCTGGGTTCTaGGGGAAGTCCTCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASWVPGF*GKSSKK
Trigger: CTTCTTGGAGGACTTCCCTCAGAACCCAGGCACCCA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCTGCTGTGAGGTCCTaGGGCCCTGCAGGGCTGACT +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHSAVRS*GPAGLT
Trigger: AGTCAGCCCTGCAGGGCCTCAGGACCTCACAGCAGA...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGGAACGTTCCAGCCACTaGGCAGGTATGCATCCTGAT +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRERSSH*AGMHPD
Trigger: ATCAGGATGCATACCTGCGCAGTGGCTGGAACGTTC...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR GCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGAGGTCCTCCTCCAGCTaGTGTTTCTCTCGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRRSSSS*CFSRSF
Trigger: AAAGCTCCGAGAGAAACAGCAGCTGGAGGAGGACCT...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCTGCCTCCAAAGAGCTaGATGCCCAGCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASLPPKS*MPSRAK
Trigger: CTTTGCCCTGCTGGGCATGCAGCTCTTTGGAGGCAG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTGGCGGTGGTGGGGATaGCTTCACCCTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASWRWWG*LHPWTS
Trigger: AGAAGTCCAAGGGTGAAGGCATCCCCACCACCGCCA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCGCTTTCTCTTTCAGCTaGAGCTCGGCCAGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASAFSFS*SSARGR
Trigger: ACGCCCTCTGGCCGAGCTGCAGCTGAAAGAGAAAGC...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAGCTTTCTCTTTCAGCTaGAGCTCGGCCAGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPAFSFS*SSARGR
Trigger: ACGCCCTCTGGCCGAGCTGCAGCTGAAAGAGAAAGC...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAGAGCAAGAGGGTGGGTaGCTGGGTTCTGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPEQEGG*LGSEGS
Trigger: ACTTCCCTCAGAACCCAGGCACCCACCCTCTTGCTC...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCGTCAACCAGAGTGGCTaGTTGTGGTGCTCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASVNQSG*LWCSEA
Trigger: TGCCTCGGAGCACCACAACCAGCCACTCTGGTTGAC...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGCTCGGCCAGAGGGCGTaGTCGGGGGCTCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: WRWRWTLAKVTGLQLRNRLGQRA*SGAHWD
Trigger: ATCCCAGTGAGCCCCCGACCACGCCCTCTGGCCGAG...CCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTCTTCACCACGGAGATaGCGCTGGACTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMSSPRR*RWTRGP
Trigger: TGGGCCTCGAGTCCAGCGCCATCTCCGTGGTGAAGA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCTCTTCACCACGGAGATaGCGCTGGACTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSSSPRR*RWTRGP
Trigger: TGGGCCTCGAGTCCAGCGCCATCTCCGTGGTGAAGA...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTGTACGCATTGGCGCTaGTTCTTGTCGAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRCTHWR*FLSSSQ
Trigger: CTGTGAGCTCGACAAGAACCAGCGCCAATGCGTACA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGAATACAGTCCCCCGCTaGAGGCCAGGAAAGTATCGA +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRNTVPR*RPGKYR
Trigger: TCGATACTTTCCTGGCCTCCAGCGGGGGACTGTATT...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCGGCGGAAGAAGGCACTaGAGATACGGGCGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASGGRRH*RYGRSH
Trigger: ATGAGAGCGCCCGTATCTCCAGTGCCTTCTTCCGCC...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCGCGTCCCGTCCACCATaGCGATCTTCCCGAACATCT +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASASRPP*RSSRTS
Trigger: AGATGTTCGGGAAGATCGCCATGGTGGACGGGACGC...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTGGCAGCCTCTACCATaGCCCTCTCCAGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASWQPLP*PSPVPP
Trigger: AGGAGGAACTGGAGAGGGCCATGGTAGAGGCTGCCA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAAAGAGGGTGGGTGCCTaGGTTCTGAGGGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPKRVGA*VLREVL
Trigger: GAGGACTTCCCTCAGAACCCAGGCACCCACCCTCTT...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCATCTGCCAGGGCCTaGCCTGTTGCCATGACGAAG +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMASARA*PVAMTK
Trigger: CTTCGTCATGGCAACAGGCCAGGCCCTGGCAGATGC...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCTCCTCTGGTTCCATCTaGCAGGCATCTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSSSGSI*QASARA
Trigger: GGCCCTGGCAGATGCCTGCCAGATGGAACCAGAGGA...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTTCCATCTGGGAGAGCTaGCACGGGGAAGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTASIWES*HGEGGT
Trigger: GGTGCCTCCTTCCCCGTGCCAGCTCTCCCAGATGGA...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161865.2
3UTR CAA 72 bp GTGAATGGCCACACAAGCCCTGCCGAATCCTGCTTCTaGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: VNGHTSPAESCF*LMRRRAGPAHP
Trigger: TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGGGCTTGTGTGGCCATTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCTCCATTCCACGATGCTaGTGCAGGCCTTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSSIPRC*CRPSSG
Trigger: CCCTGAGGAAGGCCTGCATCAGCATCGTGGAATGGA...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR TCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTCCATTCCACGATGCTaGTGCAGGCCTTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMSIPRC*CRPSSG
Trigger: CCCTGAGGAAGGCCTGCATCAGCATCGTGGAATGGA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR TCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGAGTTGTCGAAGTGGGTaGTGCCGTGGTTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMSCRSG*CRGWVL
Trigger: CAGGACCCAACCACGGCATCACCCACTTCGACAACT...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGGACGCAGCTCTATCTaGGTGGGGTCTCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSGRSSI*VGSPSL
Trigger: CAAGGATGGAGACCCCACTCAGATAGAGCTGCGTCC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGGACGCAGCTCTATCTaGGTGGGGTCTCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMGRSSI*VGSPSL
Trigger: CAAGGATGGAGACCCCACTCAGATAGAGCTGCGTCC...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAAGGAAGTTGTCCACTTaGCCAAACAGGCCTCCCGTC +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPRKLST*PNRPPV
Trigger: GACGGGAGGCCTGTTTGGTCAAGTGGACAACTTCCT...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCAGGAAGTTGTCCACTTaGCCAAACAGGCCTCCCGTC +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASRKLST*PNRPPV
Trigger: GACGGGAGGCCTGTTTGGTCAAGTGGACAACTTCCT...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAACAGGTTTCTTCGGCTaGTTCTTCCTCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPTGFFG*FFLRPS
Trigger: CGAGGGCCTGAGGAAGAAGCAGCCGAAGAAACCTGT...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR GCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGAGCCGGCTCCTTTGCTaGTCATGGGGGCCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGSRLLC*SWGPCW
Trigger: CCAACACGGCCCCCATGAGCAGCAAAGGAGCCGGCT...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGAGTGGCTGGTTGTGGTaGTCCGAGGCAATGGACAGG +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMSGWLW*SEAMDR
Trigger: CCTGTCCATTGCCTCGGAGCACCACAACCAGCCACT...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCCTGCCTCCAAAGAGCTaGATGCCCAGCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSLPPKS*MPSRAK
Trigger: CTTTGCCCTGCTGGGCATGCAGCTCTTTGGAGGCAG...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTGGCGGTGGTGGGGATaGCTTCACCCTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMWRWWG*LHPWTS
Trigger: AGAAGTCCAAGGGTGAAGGCATCCCCACCACCGCCA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCTGGCGGTGGTGGGGATaGCTTCACCCTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSWRWWG*LHPWTS
Trigger: AGAAGTCCAAGGGTGAAGGCATCCCCACCACCGCCA...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCTTTCTCTTTCAGCTaGAGCTCGGCCAGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMAFSFS*SSARGR
Trigger: ACGCCCTCTGGCCGAGCTGCAGCTGAAAGAGAAAGC...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTTGTTCCGGTTTATCTaGGTCCCGTCCACCATGGCG +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASLFRFI*VPSTMA
Trigger: CGCCATGGTGGACGGGACGCAGATAAACCGGAACAA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCGTGGATCTCAGGAGCTaGCTCTTCCTCTATGGTCCG +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASVDLRS*LFLYGP
Trigger: CGGACCATAGAGGAAGAGGCAGCTCCTGAGATCCAC...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTGGACCACCTGAAGACTaGGCACCCCCGACACCAGCC +
Preference number: 4 (lower is better)
Translates to: GVGGGLWPKSQGYSFETGGPPED*APPTPA
Trigger: GGCTGGTGTCGGGGGTGCCCAGTCTTCAGGTGGTCC...ACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACACGAGCAGGGCAATGTaGAACAGGGGGAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHTSRAM*NRGSMA
Trigger: GGCCATGCTCCCCCTGTTCCACATTGCCCTGCTCGT...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGCAGTCCACCCCTCCATaGAGATGCATTGATACACAG +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRQSTPP*RCIDTQ
Trigger: CTGTGTATCAATGCATCTCCATGGAGGGGTGGACTG...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGGATTTCACTAGGTCATaGCACTTCCAGCGGAAGACG +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRDFTRS*HFQRKT
Trigger: CGTCTTCCGCTGGAAGTGCCATGACCTAGTGAAATC...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGTCAACCAGAGTGGCTaGTTGTGGTGCTCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSVNQSG*LWCSEA
Trigger: TGCCTCGGAGCACCACAACCAGCCACTCTGGTTGAC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTCACCCGTCAGGACCTaGAAGACACTGATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMSPVRT*KTLMRA
Trigger: GGCCCTCATCAGTGTCTTCCAGGTCCTGACGGGTGA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATCTGCTCCAGTTTCTTaGTCACCGTGGCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPSAPVS*SPWPSP
Trigger: AGGAGAGGGCCACGGTGACCAAGAAACTGGAGCAGA...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTTTTCAGCTTGGCGGTaGTGGGGATGCCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASFSAWR*WGCLHP
Trigger: AGGGTGAAGGCATCCCCACCACCGCCAAGCTGAAAA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTTCCTCATCGTCCCCTaGGAAGTCAGCCGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASFLIVP*EVSRRV
Trigger: TACCCTTCGGCTGACTTCCCAGGGGACGATGAGGAA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTGGTCGGGGGCTCACTaGGATCTCGGGCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHWSGAH*DLGLIF
Trigger: GAAGATGAGCCCGAGATCCCAGTGAGCCCCCGACCA...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGTGGAGTCGGCCCGGATaGGATCCTCAGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VGGGLWPKSQGYSFETGWWSRPG*DPQRPG
Trigger: CCCTGGCCGCTGAGGATCCCATCCGGGCCGACTCCA...CCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAGGATCTGATTCCTCATaGAGTCGGCCCGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPGSDSS*SRPGWD
Trigger: ATCCCATCCGGGCCGACTCCATGAGGAATCAGATCC...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAGATGTAACACCTCAGTaGGCGGGCCTTCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPDVTPQ*AGLQGI
Trigger: TATGCCCTGAAGGCCCGCCCACTGAGGTGTTACATC...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGGCGGAAGAAGGCACTaGAGATACGGGCGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSGGRRH*RYGRSH
Trigger: ATGAGAGCGCCCGTATCTCCAGTGCCTTCTTCCGCC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGCGTCCCGTCCACCATaGCGATCTTCCCGAACATCT +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSASRPP*RSSRTS
Trigger: AGATGTTCGGGAAGATCGCCATGGTGGACGGGACGC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCCAGAGATGGCACGGTaGATCTCAGGAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMPEMAR*ISGAAS
Trigger: AGAGGCAGCTCCTGAGATCCACCGTGCCATCTCTGG...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCTGGCAGCCTCTACCATaGCCCTCTCCAGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSWQPLP*PSPVPP
Trigger: AGGAGGAACTGGAGAGGGCCATGGTAGAGGCTGCCA...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGGGAAGGAGGCACCTaGCCTTCAGGCATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAGEGGT*PSGIPL
Trigger: GAGAGGAATGCCTGAAGGCCAGGTGCCTCCTTCCCC...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCACCTCGACTTCCTCTaGTTCCATCTGGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASHLDFL*FHLAGI
Trigger: GATGCCTGCCAGATGGAACCAGAGGAAGTCGAGGTG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR TCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAGGAAGCCGTAGGCTATaGTCTTCATGGCGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPGSRRL*SSWRLQ
Trigger: TTGAAGCCGCCATGAAGATCATAGCCTACGGCTTCC...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR TCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACGATGGAGTTGAGCAGTaGGGCCACCAGGTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHDGVEQ*GHQVAQ
Trigger: CTGAGCAACCTGGTGGCCTCACTGCTCAACTCCATC...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGTGGAGCGGATGGAGTTaGGCAGTGAGGCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGWSGWS*AVRPPG
Trigger: ACCTGGTGGCCTCACTGCTCAACTCCATCCGCTCCA...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACGGCCCTCTCCTCTTCTaGCTTGTCTGGGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHGPLLF*LVWEPF
Trigger: AAAGGGCTCCCAGACAAGTCAGAAGAGGAGAGGGCC...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCCCTCTCCTCTTCTaGCTTGTCTGGGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAGPLLF*LVWEPF
Trigger: AAAGGGCTCCCAGACAAGTCAGAAGAGGAGAGGGCC...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCGGAGACCGTGAAGAGTaGCATCATAGCGGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASGDREE*HHSGEY
Trigger: GTACTCTCCGCTATGATGTCACTCTTCACGGTCTCC...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGGGAAGTGCTCCTGGATaGGGAATGTGGCATAGAATT +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRGSAPG*GMWHRI
Trigger: AATTCTATGCCACATTCCTCATCCAGGAGCACTTCC...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACGTCTTTGGTTGGCCATaGCAGGGGGCAGAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHVFGWP*QGAESW
Trigger: CCAACTCTCTGCCCCCTGTCATGGCCAACCAAAGAC...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCTCCAAGAAGACTGGTaGCTCCAGCTCTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASLQEDW*LQLFHL
Trigger: GAGATGGAAGAGCTGGAGTCACCAGTCTTCTTGGAG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGACAGGTTTCTTCGGCTaGTTCTTCCTCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMTGFFG*FFLRPS
Trigger: CGAGGGCCTGAGGAAGAAGCAGCCGAAGAAACCTGT...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR GCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGCATCCAAAGACAGCTTaGCTTCTCTCAAGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRHPKTA*LLSSRP
Trigger: TGGACGACTTGAGAGAAGGCAAGCTGTCTTTGGATG...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTAGTGGCTGGTTGTGGTaGTCCGAGGCAATGGACAGG +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTASGWLW*SEAMDR
Trigger: CCTGTCCATTGCCTCGGAGCACCACAACCAGCCACT...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGGCAGGATCTCCAGGATaGCGCTGCACACCACGAAGC +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGAGSPG*RCTPRS
Trigger: GCTTCGTGGTGTGCAGCGGCATCCTGGAGATCCTGC...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGTGAGGCCACCAGGTTaGTCAGCGATGTCCAGTACT +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSVRPPG*SAMSST
Trigger: AGTACTGGACATCGCTGAGCAACCTGGTGGCCTCAC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACCTGCCTCCAAAGAGCTaGATGCCCAGCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHLPPKS*MPSRAK
Trigger: CTTTGCCCTGCTGGGCATGCAGCTCTTTGGAGGCAG...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTCTGCCTCCAAAGAGCTaGATGCCCAGCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTALPPKS*MPSRAK
Trigger: CTTTGCCCTGCTGGGCATGCAGCTCTTTGGAGGCAG...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCCTCCGGGATGGGCACTaGTTTCTCTTTCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSLRDGH*FLFQLQ
Trigger: CTGCAGCTGAAAGAGAAAGCAGTGCCCATCCCGGAG...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCGATGTTCCCGATGGTaGGAATGGCAACAAACACGC +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASRCSRW*EWQQTR
Trigger: GCGTGTTTGTTGCCATTCGCACCATCGGGAACATCG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCACAGCTTCCCATAGCTaGAGGCCAGCAGGATCTCTT +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASTASHS*RPAGSL
Trigger: AAGAGATCCTGCTGGCCTGCAGCTATGGGAAGCTGT...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGTCACCACATCCAGGTaGTTGATCCTGCCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSVTTSR*LILPLA
Trigger: GGCTAAGGGCAGGATCAAGCACCTGGATGTGGTGAC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGTCACCACATCCAGGTaGTTGATCCTGCCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMVTTSR*LILPLA
Trigger: GGCTAAGGGCAGGATCAAGCACCTGGATGTGGTGAC...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCACCAGCCTCTTACATaGTACCCTGTGTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASHQPLT*YPVWAE
Trigger: TTCTGCCCACACAGGGTAGCATGTAAGAGGCTGGTG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACGAGCAAGAGGGTGGGTaGCTGGGTTCTGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHEQEGG*LGSEGS
Trigger: ACTTCCCTCAGAACCCAGGCACCCACCCTCTTGCTC...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCTGTCCACATGAGATCTaGTGTGAGGTCCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSCPHEI*CEVLRP
Trigger: GGGCCTCAGGACCTCACAGCAGATCTCATGTGGACA...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGAGGATGCTCTGCTTTTaGCCCTGTTACCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMRMLCF*PCYLAR
Trigger: CCGTGCCAGGTAACAGGGGCAAAAGCAGAGCATCCT...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCCCTTTCCCTCTTTCTaGACAGGATGCTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMPFPSF*TGCSAW
Trigger: CCAGGCAGAGCATCCTGTGCAGAAAGAGGGAAAGGG...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGAGGTTCCCCTGGACTTaGCCTTCTCTCGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMRFPWT*PSLALW
Trigger: CCAAAGAGCGAGAGAAGGCCAAGTCCAGGGGAACCT...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCAGGTTCCCCTGGACTTaGCCTTCTCTCGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSRFPWT*PSLALW
Trigger: CCAAAGAGCGAGAGAAGGCCAAGTCCAGGGGAACCT...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTTTGGAAGGTTCCCCTaGACTTGGCCTTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASFGRFP*TWPSLA
Trigger: AGCGAGAGAAGGCCAAGTCCAGGGGAACCTTCCAAA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGATGGGTCAACCAGAGTaGCTGGTTGTGGTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMMGQPE*LVVVLR
Trigger: TCGGAGCACCACAACCAGCCACTCTGGTTGACCCAT...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTTCACCCGTCAGGACCTaGAAGACACTGATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTASPVRT*KTLMRA
Trigger: GGCCCTCATCAGTGTCTTCCAGGTCCTGACGGGTGA...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTTTTCAGCTTGGCGGTaGTGGGGATGCCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMFSAWR*WGCLHP
Trigger: AGGGTGAAGGCATCCCCACCACCGCCAAGCTGAAAA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTTCCTCATCGTCCCCTaGGAAGTCAGCCGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMFLIVP*EVSRRV
Trigger: TACCCTTCGGCTGACTTCCCAGGGGACGATGAGGAA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCACTTTGGCTCTGTTTATaGCCCGGAGTGGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPLWLCL*PGVVSA
Trigger: TGCTGAGACCACTCCGGGCCATAAACAGAGCCAAAG...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTCCCGATGGTGCGAATaGCAACAAACACGCACTGCA +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASSRWCE*QQTRTA
Trigger: TGCAGTGCGTGTTTGTTGCCATTCGCACCATCGGGA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGGCAGCTCTATCTGAGTaGGGTCTCCATCCTTGTATA +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRAALSE*GLHPCI
Trigger: TATACAAGGATGGAGACCCCACTCAGATAGAGCTGC...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTACGCATTGGCGCTaGTTCTTGTCGAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPCTHWR*FLSSSQ
Trigger: CTGTGAGCTCGACAAGAACCAGCGCCAATGCGTACA...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGATGTAACACCTCAGTaGGCGGGCCTTCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMDVTPQ*AGLQGI
Trigger: TATGCCCTGAAGGCCCGCCCACTGAGGTGTTACATC...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGATGTAACACCTCAGTaGGCGGGCCTTCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSDVTPQ*AGLQGI
Trigger: TATGCCCTGAAGGCCCGCCCACTGAGGTGTTACATC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCGGAAGAAGGCACTaGAGATACGGGCGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAGGRRH*RYGRSH
Trigger: ATGAGAGCGCCCGTATCTCCAGTGCCTTCTTCCGCC...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTCCAGAGATGGCACGGTaGATCTCAGGAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAPEMAR*ISGAAS
Trigger: AGAGGCAGCTCCTGAGATCCACCGTGCCATCTCTGG...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTCAGGTCTCCAGAGATaGCACGGTGGATCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMSGLQR*HGGSQE
Trigger: CTCCTGAGATCCACCGTGCCATCTCTGGAGACCTGA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTTGGCAGCCTCTACCATaGCCCTCTCCAGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAWQPLP*PSPVPP
Trigger: AGGAGGAACTGGAGAGGGCCATGGTAGAGGCTGCCA...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCAGGGGGCAGAGAGTTaGTCCTTTCCAGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASQGAES*SFPGSC
Trigger: ACAACTTCCTGGAAAGGACCAACTCTCTGCCCCCTG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGGGGGAAGGAGGCACCTaGCCTTCAGGCATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGGEGGT*PSGIPL
Trigger: GAGAGGAATGCCTGAAGGCCAGGTGCCTCCTTCCCC...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
60% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGGCATCTGCCAGGGCCTaGCCTGTTGCCATGACGAAG +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGASARA*PVAMTK
Trigger: CTTCGTCATGGCAACAGGCCAGGCCCTGGCAGATGC...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGTCCTCTGGTTCCATCTaGCAGGCATCTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGSSGSI*QASARA
Trigger: GGCCCTGGCAGATGCCTGCCAGATGGAACCAGAGGA...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCCACCTCGACTTCCTCTaGTTCCATCTGGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSHLDFL*FHLAGI
Trigger: GATGCCTGCCAGATGGAACCAGAGGAAGTCGAGGTG...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR TCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCAAGCTCTCTGTGTCTaGTCCCCCTTCATCCAAAGA +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASQALCV*SPFIQR
Trigger: TCTTTGGATGAAGGGGGATCAGACACAGAGAGCTTG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGGATGGAGTTGAGCAGTaGGGCCACCAGGTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGDGVEQ*GHQVAQ
Trigger: CTGAGCAACCTGGTGGCCTCACTGCTCAACTCCATC...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TTGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGCGAGGCCCATGGAGATaGGGGACACAGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: LALAVDSGQSHRVTASKQRGPWR*GTQPPP
Trigger: TGGTGGTGGCTGTGTCCCTCATCTCCATGGGCCTCG...CTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR TCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGGGACGCAGCTCTATCTaGGTGGGGTCTCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGGRSSI*VGSPSL
Trigger: CAAGGATGGAGACCCCACTCAGATAGAGCTGCGTCC...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGGAGACCGTGAAGAGTaGCATCATAGCGGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSGDREE*HHSGEY
Trigger: GTACTCTCCGCTATGATGTCACTCTTCACGGTCTCC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCTCCTATTGGAGGGATaGCTTGGTCCAAGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASLLLEG*LGPRAS
Trigger: TGAAGCTCTTGGACCAAGTCATCCCTCCAATAGGAG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGTGGGTGCCTGGGTTCTaGGGGAAGTCCTCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGWVPGF*GKSSKK
Trigger: CTTCTTGGAGGACTTCCCTCAGAACCCAGGCACCCA...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCTCTGGAGCCGGCTCCTTTGCTaGTCATGGGGGCCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GGLWPKSQGYSFETGWLWSRLLC*SWGPCW
Trigger: CCAACACGGCCCCCATGAGCAGCAAAGGAGCCGGCT...CCAGAGCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp GTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCCAAGCCGGCTCCTTTaGTGCTCATGGGGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: VGGGLWPKSQGYSFETGWPSRLL*CSWGPC
Trigger: ACACGGCCCCCATGAGCAGCAAAGGAGCCGGCTTGG...CCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGAGGTCCTCCTCCAGCTaGTGTTTCTCTCGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMRSSSS*CFSRSF
Trigger: AAAGCTCCGAGAGAAACAGCAGCTGGAGGAGGACCT...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGCTTCAAAGTCATATCTaGCTCCAAAGAGCTGCATGC +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRLQSHI*LQRAAC
Trigger: GCATGCAGCTCTTTGGAGGCAGATATGACTTTGAAG...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTCACCCTTGGACTTCTaGTCCAGTTTCTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASSPLDF*SSFLVT
Trigger: GGTGACCAAGAAACTGGAGCAGAAGTCCAAGGGTGA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCGATGTTCCCGATGGTaGGAATGGCAACAAACACGC +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMRCSRW*EWQQTR
Trigger: GCGTGTTTGTTGCCATTCGCACCATCGGGAACATCG...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp AATGCCATCAGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGATGTCCACAGCAGGGTaGGCACACCCTCCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: NAIRGKVKMAWYSSARPRMSTAG*AHPPPG
Trigger: ACCGGGCGGAGGGTGTGCGCACCCTGCTGTGGACAT...CCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCTGATGGCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTTGTTCCGGTTTATCTaGGTCCCGTCCACCATGGCG +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHLFRFI*VPSTMA
Trigger: CGCCATGGTGGACGGGACGCAGATAAACCGGAACAA...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCACAGCTTCCCATAGCTaGAGGCCAGCAGGATCTCTT +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSTASHS*RPAGSL
Trigger: AAGAGATCCTGCTGGCCTGCAGCTATGGGAAGCTGT...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCACCAGCCTCTTACATaGTACCCTGTGTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMHQPLT*YPVWAE
Trigger: TTCTGCCCACACAGGGTAGCATGTAAGAGGCTGGTG...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTGTCCACATGAGATCTaGTGTGAGGTCCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHCPHEI*CEVLRP
Trigger: GGGCCTCAGGACCTCACAGCAGATCTCATGTGGACA...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCTGCACAGGATGCTCTaGTTTTGCCCCTGTTACCTG +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMLHRML*FCPCYL
Trigger: CAGGTAACAGGGGCAAAAGCAGAGCATCCTGTGCAG...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTCAGGGCCTGGCCTGTTaGCATGACGAAGTTAGCATC +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAQGLAC*HDEVSI
Trigger: GATGCTAACTTCGTCATGGCAACAGGCCAGGCCCTG...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR GCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACCCCTTTCCCTCTTTCTaGACAGGATGCTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHPFPSF*TGCSAW
Trigger: CCAGGCAGAGCATCCTGTGCAGAAAGAGGGAAAGGG...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGTTGTTGTCATCCTCTaGCATGGGCAGGTACACTGC +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSVVVIL*HGQVHC
Trigger: GCAGTGTACCTGCCCATGCCAGAGGATGACAACAAC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGTTGTTGTCATCCTCTaGCATGGGCAGGTACACTGC +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMVVVIL*HGQVHC
Trigger: GCAGTGTACCTGCCCATGCCAGAGGATGACAACAAC...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCCTCCTTTGCTGCTCATaGGGGCCGTGTTGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSLLCCS*GPCWFE
Trigger: TTCAAACCAACACGGCCCCCATGAGCAGCAAAGGAG...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACAGGTTCCCCTGGACTTaGCCTTCTCTCGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHRFPWT*PSLALW
Trigger: CCAAAGAGCGAGAGAAGGCCAAGTCCAGGGGAACCT...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTTTGGAAGGTTCCCCTaGACTTGGCCTTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMFGRFP*TWPSLA
Trigger: AGCGAGAGAAGGCCAAGTCCAGGGGAACCTTCCAAA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAGATTTCACTAGGTCATaGCACTTCCAGCGGAAGACG +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPDFTRS*HFQRKT
Trigger: CGTCTTCCGCTGGAAGTGCCATGACCTAGTGAAATC...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGGCCAATAGAAGACCTTaGATTTCACTAGGTCATGGC +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRANRRP*ISLGHG
Trigger: GCCATGACCTAGTGAAATCCAAGGTCTTCTATTGGC...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGTGCTCCGAGGCAATaGACAGGGTGTTTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAGAPRQ*TGCLGQ
Trigger: TTGCCCTAAACACCCTGTCCATTGCCTCGGAGCACC...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACGGTGCTCCGAGGCAATaGACAGGGTGTTTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHGAPRQ*TGCLGQ
Trigger: TTGCCCTAAACACCCTGTCCATTGCCTCGGAGCACC...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGATGGACATGAAGTACTaGCGCAGGCCCAGCCCGTAC +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGMDMKY*RRPSPY
Trigger: GTACGGGCTGGGCCTGCGCCAGTACTTCATGTCCAT...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAACACTGATGAGGGCCTaGGGGAAGTTGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPTLMRA*GKLSKL
Trigger: CAACTTTGACAACTTCCCCCAGGCCCTCATCAGTGT...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTCAGCCTTGGCCTTTTaGGCAGATGTCAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASSALAF*ADVRLS
Trigger: AGAGAGTCTGACATCTGCCCAAAAGGCCAAGGCTGA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATCAGCCTTGGCCTTTTaGGCAGATGTCAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPSALAF*ADVRLS
Trigger: AGAGAGTCTGACATCTGCCCAAAAGGCCAAGGCTGA...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTTCTGCTCCAGTTTCTTaGTCACCGTGGCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTASAPVS*SPWPSP
Trigger: AGGAGAGGGCCACGGTGACCAAGAAACTGGAGCAGA...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCTGCTCCAGTTTCTTaGTCACCGTGGCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHSAPVS*SPWPSP
Trigger: AGGAGAGGGCCACGGTGACCAAGAAACTGGAGCAGA...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTTTCCTCATCGTCCCCTaGGAAGTCAGCCGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAFLIVP*EVSRRV
Trigger: TACCCTTCGGCTGACTTCCCAGGGGACGATGAGGAA...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACGGATCTGATTCCTCATaGAGTCGGCCCGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHGSDSS*SRPGWD
Trigger: ATCCCATCCGGGCCGACTCCATGAGGAATCAGATCC...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCTTTGGCTCTGTTTATaGCCCGGAGTGGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMLWLCL*PGVVSA
Trigger: TGCTGAGACCACTCCGGGCCATAAACAGAGCCAAAG...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCCTTTGGCTCTGTTTATaGCCCGGAGTGGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSLWLCL*PGVVSA
Trigger: TGCTGAGACCACTCCGGGCCATAAACAGAGCCAAAG...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCTCATTGTGTATCCACTaGCGGGGACGCAGCTCTATC +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSSLCIH*RGRSSI
Trigger: GATAGAGCTGCGTCCCCGCCAGTGGATACACAATGA...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTCATTGTGTATCCACTaGCGGGGACGCAGCTCTATC +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMSLCIH*RGRSSI
Trigger: GATAGAGCTGCGTCCCCGCCAGTGGATACACAATGA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGCCTCATTTGAGTCTATaGCCTTGTACAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRPHLSL*PCTVAE
Trigger: CTCAGCTACTGTACAAGGCCATAGACTCAAATGAGG...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGAATACAGTCCCCCGCTaGAGGCCAGGAAAGTATCGA +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMNTVPR*RPGKYR
Trigger: TCGATACTTTCCTGGCCTCCAGCGGGGGACTGTATT...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGACGTACGGCAGGGCCTaGAAGGACTTGATGAATGTC +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMTYGRA*KDLMNV
Trigger: GACATTCATCAAGTCCTTCCAGGCCCTGCCGTACGT...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCACGTACGGCAGGGCCTaGAAGGACTTGATGAATGTC +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSTYGRA*KDLMNV
Trigger: GACATTCATCAAGTCCTTCCAGGCCCTGCCGTACGT...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCTGCCTCTTCCTCTATaGTCCGTAATCCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASLPLPL*SVIQPV
Trigger: TACAGGCTGGATTACGGACCATAGAGGAAGAGGCAG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCCAGAGATGGCACGGTaGATCTCAGGAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGPEMAR*ISGAAS
Trigger: AGAGGCAGCTCCTGAGATCCACCGTGCCATCTCTGG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGAAGAGGGTGGGTGCCTaGGTTCTGAGGGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGKRVGA*VLREVL
Trigger: GAGGACTTCCCTCAGAACCCAGGCACCCACCCTCTT...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCAAAGTAGGAGGAAGTaGCGACATACCACACCTGAT +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASQSRRK*RHTTPD
Trigger: ATCAGGTGTGGTATGTCGTCACTTCCTCCTACTTTG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCTCCTATTGGAGGGATaGCTTGGTCCAAGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMLLLEG*LGPRAS
Trigger: TGAAGCTCTTGGACCAAGTCATCCCTCCAATAGGAG...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCGGAAGTGCTCCTGGATaGGGAATGTGGCATAGAATT +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASGSAPG*GMWHRI
Trigger: AATTCTATGCCACATTCCTCATCCAGGAGCACTTCC...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACCTCCAAGAAGACTGGTaGCTCCAGCTCTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHLQEDW*LQLFHL
Trigger: GAGATGGAAGAGCTGGAGTCACCAGTCTTCTTGGAG...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGACAGGTTTCTTCGGCTaGTTCTTCCTCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGTGFFG*FFLRPS
Trigger: CGAGGGCCTGAGGAAGAAGCAGCCGAAGAAACCTGT...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR GCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTAGGTCCTCCTCCAGCTaGTGTTTCTCTCGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTARSSSS*CFSRSF
Trigger: AAAGCTCCGAGAGAAACAGCAGCTGGAGGAGGACCT...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp CGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCAGGATCTCCAGGATaGCGCTGCACACCACGAAGC +
Preference number: 4 (lower is better)
Translates to: RWRWTLAKVTGLQLRNRLAGSPG*RCTPRS
Trigger: GCTTCGTGGTGTGCAGCGGCATCCTGGAGATCCTGC...CAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGGTGAGGCCACCAGGTTaGTCAGCGATGTCCAGTACT +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGVRPPG*SAMSST
Trigger: AGTACTGGACATCGCTGAGCAACCTGGTGGCCTCAC...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACCGATGTTCCCGATGGTaGGAATGGCAACAAACACGC +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHRCSRW*EWQQTR
Trigger: GCGTGTTTGTTGCCATTCGCACCATCGGGAACATCG...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTACAGCTTCCCATAGCTaGAGGCCAGCAGGATCTCTT +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTATASHS*RPAGSL
Trigger: AAGAGATCCTGCTGGCCTGCAGCTATGGGAAGCTGT...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGGTCACCACATCCAGGTaGTTGATCCTGCCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGVTTSR*LILPLA
Trigger: GGCTAAGGGCAGGATCAAGCACCTGGATGTGGTGAC...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGGTGGATCTCAGGAGCTaGCTCTTCCTCTATGGTCCG +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGVDLRS*LFLYGP
Trigger: CGGACCATAGAGGAAGAGGCAGCTCCTGAGATCCAC...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCGCTCCTCAAAGTTCCTaGTGTTGGGTGTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASAPQSS*CWVFPE
Trigger: TTCTGGAAACACCCAACAGCAGGAACTTTGAGGAGC...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCCAGTCCACCCCTCCATaGAGATGCATTGATACACAG +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSQSTPP*RCIDTQ
Trigger: CTGTGTATCAATGCATCTCCATGGAGGGGTGGACTG...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTTTGGAAGGTTCCCCTaGACTTGGCCTTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHFGRFP*TWPSLA
Trigger: AGCGAGAGAAGGCCAAGTCCAGGGGAACCTTCCAAA...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTTCTCTCGGAGCTTTTaGAAGGTTCCCCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMFSRSF*KVPLDL
Trigger: CAAGTCCAGGGGAACCTTCCAAAAGCTCCGAGAGAA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGGGTGCTCCGAGGCAATaGACAGGGTGTTTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGGAPRQ*TGCLGQ
Trigger: TTGCCCTAAACACCCTGTCCATTGCCTCGGAGCACC...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGGTCAACCAGAGTGGCTaGTTGTGGTGCTCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: WRWRWTLAKVTGLQLRNRVNQSG*LWCSEA
Trigger: TGCCTCGGAGCACCACAACCAGCCACTCTGGTTGAC...CCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGATGGGTCAACCAGAGTaGCTGGTTGTGGTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGMGQPE*LVVVLR
Trigger: TCGGAGCACCACAACCAGCCACTCTGGTTGACCCAT...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGATGGACATGAAGTACTaGCGCAGGCCCAGCCCGTAC +
Preference number: 4 (lower is better)
Translates to: WRWRWTLAKVTGLQLRNRMDMKY*RRPSPY
Trigger: GTACGGGCTGGGCCTGCGCCAGTACTTCATGTCCAT...CCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCACACTGATGAGGGCCTaGGGGAAGTTGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSTLMRA*GKLSKL
Trigger: CAACTTTGACAACTTCCCCCAGGCCCTCATCAGTGT...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGACACTGATGAGGGCCTaGGGGAAGTTGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMTLMRA*GKLSKL
Trigger: CAACTTTGACAACTTCCCCCAGGCCCTCATCAGTGT...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGGATGCCTTCACCCTTaGACTTCTGCTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMGCLHP*TSAPVS
Trigger: AGAAACTGGAGCAGAAGTCCAAGGGTGAAGGCATCC...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGTTTTCAGCTTGGCGGTaGTGGGGATGCCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGFSAWR*WGCLHP
Trigger: AGGGTGAAGGCATCCCCACCACCGCCAAGCTGAAAA...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGTGGTCGGGGGCTCACTaGGATCTCGGGCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: VGGGLWPKSQGYSFETGWWSGAH*DLGLIF
Trigger: GAAGATGAGCCCGAGATCCCAGTGAGCCCCCGACCA...CCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACCTTTGGCTCTGTTTATaGCCCGGAGTGGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHLWLCL*PGVVSA
Trigger: TGCTGAGACCACTCCGGGCCATAAACAGAGCCAAAG...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTCGTGCTTCAACCCTTTaGCTCTGTTTATGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTARASTL*LCLWPG
Trigger: TCCGGGCCATAAACAGAGCCAAAGGGTTGAAGCACG...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACCGTGCTTCAACCCTTTaGCTCTGTTTATGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHRASTL*LCLWPG
Trigger: TCCGGGCCATAAACAGAGCCAAAGGGTTGAAGCACG...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCCGATGGTGCGAATaGCAACAAACACGCACTGCA +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHSRWCE*QQTRTA
Trigger: TGCAGTGCGTGTTTGTTGCCATTCGCACCATCGGGA...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGTCAGGTCTCCAGAGATaGCACGGTGGATCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGSGLQR*HGGSQE
Trigger: CTCCTGAGATCCACCGTGCCATCTCTGGAGACCTGA...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTCAGGGGGCAGAGAGTTaGTCCTTTCCAGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAQGAES*SFPGSC
Trigger: ACAACTTCCTGGAAAGGACCAACTCTCTGCCCCCTG...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCACAAAGTTCCTGCTGTTaGGTGTTTCCAGAAACCGTG +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPQSSCC*VFPETV
Trigger: CACGGTTTCTGGAAACACCCAACAGCAGGAACTTTG...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR TCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGGGAAGCCGTAGGCTATaGTCTTCATGGCGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGGSRRL*SSWRLQ
Trigger: TTGAAGCCGCCATGAAGATCATAGCCTACGGCTTCC...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR TCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGTTCCAGAATCACAGTaGAGACCCCCAGAAAGACAA +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSVPESQ*RPPERQ
Trigger: TTGTCTTTCTGGGGGTCTTCACTGTGATTCTGGAAC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR TCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTCCATGGAGATGCATTaGTACACAGTGAGCATAGAG +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASSMEMH*YTVSIE
Trigger: CTCTATGCTCACTGTGTATCAATGCATCTCCATGGA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTCAAGCTCTCTGTGTCTaGTCCCCCTTCATCCAAAGA +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAQALCV*SPFIQR
Trigger: TCTTTGGATGAAGGGGGATCAGACACAGAGAGCTTG...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGATGGAGTTGAGCAGTaGGGCCACCAGGTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RWRWTLAKVTGLQLRNRLDGVEQ*GHQVAQ
Trigger: CTGAGCAACCTGGTGGCCTCACTGCTCAACTCCATC...CAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR TCA 90 bp GTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGGGCCCTCTCCTCTTCTaGCTTGTCTGGGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: VGGGLWPKSQGYSFETGWGPLLF*LVWEPF
Trigger: AAAGGGCTCCCAGACAAGTCAGAAGAGGAGAGGGCC...CCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR TCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGGGAGACCGTGAAGAGTaGCATCATAGCGGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGGDREE*HHSGEY
Trigger: GTACTCTCCGCTATGATGTCACTCTTCACGGTCTCC...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAACGACATACCACACCTaGTACTGGTATGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPTTYHT*YWYGFL
Trigger: CAAAAACCCATACCAGTATCAGGTGTGGTATGTCGT...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAAATCCAGCCTGTATCTaGACTGTGTCCTTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPNPACI*TVSFLG
Trigger: ACCCAAAAAGGACACAGTTCAGATACAGGCTGGATT...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp GGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCTCTGGGTCTTTGGTTGGCCATaGCAGGGGGCAGAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: GGLWPKSQGYSFETGWLWVFGWP*QGAESW
Trigger: CCAACTCTCTGCCCCCTGTCATGGCCAACCAAAGAC...CCAGAGCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGGAACGTTCCAGCCACTaGGCAGGTATGCATCCTGAT +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGERSSH*AGMHPD
Trigger: ATCAGGATGCATACCTGCGCAGTGGCTGGAACGTTC...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR GCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCCGGTTGGCAACATCTTaGAAATGGGTCAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSRLATS*KWVNQS
Trigger: ACTCTGGTTGACCCATTTGCAAGATGTTGCCAACCG...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCGGTTGGCAACATCTTaGAAATGGGTCAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMRLATS*KWVNQS
Trigger: ACTCTGGTTGACCCATTTGCAAGATGTTGCCAACCG...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCACTTCAAAGTCATATCTaGCTCCAAAGAGCTGCATGC +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPLQSHI*LQRAAC
Trigger: GCATGCAGCTCTTTGGAGGCAGATATGACTTTGAAG...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTCTTTCGACATCTTCCTaGGCTTTCTCTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTALSTSS*AFSPQP
Trigger: AGGCTGAGGAGAGAAAGCGCAGGAAGATGTCGAAAG...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACCTTTCGACATCTTCCTaGGCTTTCTCTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHLSTSS*AFSPQP
Trigger: AGGCTGAGGAGAGAAAGCGCAGGAAGATGTCGAAAG...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTTCACCCTTGGACTTCTaGTCCAGTTTCTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTASPLDF*SSFLVT
Trigger: GGTGACCAAGAAACTGGAGCAGAAGTCCAAGGGTGA...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGCTCCGGGATGGGCACTaGTTTCTCTTTCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: WRWRWTLAKVTGLQLRNRLRDGH*FLFQLQ
Trigger: CTGCAGCTGAAAGAGAAAGCAGTGCCCATCCCGGAG...CCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCGATGTTCCCGATGGTaGGAATGGCAACAAACACGC +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGRCSRW*EWQQTR
Trigger: GCGTGTTTGTTGCCATTCGCACCATCGGGAACATCG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTGTAGTAGTAGCCCCTaGATTCCTCTTCAGTCATCT +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASCSSSP*IPLQSS
Trigger: AGATGACTGAAGAGGAATGCAGGGGCTACTACTACA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTGTCACCACATCCAGGTaGTTGATCCTGCCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: GVGGGLWPKSQGYSFETGVTTSR*LILPLA
Trigger: GGCTAAGGGCAGGATCAAGCACCTGGATGTGGTGAC...ACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCACCAGCCTCTTACATaGTACCCTGTGTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGHQPLT*YPVWAE
Trigger: TTCTGCCCACACAGGGTAGCATGTAAGAGGCTGGTG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCTCTGGTGTCATCCTCTGGCATaGGCAGGTACACTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GGLWPKSQGYSFETGWLWCHPLA*AGTLPG
Trigger: CCCTGGCAGTGTACCTGCCCATGCCAGAGGATGACA...CCAGAGCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp CTGCAAGGCCCAGGTTCTCTGAGAAAGGGGGTAGAGGGAGTTCCAGATGTTCTAACGAGCAGGGCAATGTaGAACAGGGGGAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: LQGPGSLRKGVEGVPDVLTSRAM*NRGSMA
Trigger: GGCCATGCTCCCCCTGTTCCACATTGCCCTGCTCGT...TAGAACATCTGGAACTCCCTCTACCCCCTTTCTCAGAGAACCTGGGCCTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTTCTCTCGGAGCTTTTaGAAGGTTCCCCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHFSRSF*KVPLDL
Trigger: CAAGTCCAGGGGAACCTTCCAAAAGCTCCGAGAGAA...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTTTCTCTCGGAGCTTTTaGAAGGTTCCCCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAFSRSF*KVPLDL
Trigger: CAAGTCCAGGGGAACCTTCCAAAAGCTCCGAGAGAA...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACGATTTCACTAGGTCATaGCACTTCCAGCGGAAGACG +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHDFTRS*HFQRKT
Trigger: CGTCTTCCGCTGGAAGTGCCATGACCTAGTGAAATC...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAGCCAATAGAAGACCTTaGATTTCACTAGGTCATGGC +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPANRRP*ISLGHG
Trigger: GCCATGACCTAGTGAAATCCAAGGTCTTCTATTGGC...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTTCAGCAACACGCGGTTaGCAACATCTTGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTASATRG*QHLANG
Trigger: CCCATTTGCAAGATGTTGCCAACCGCGTGTTGCTGA...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACACACTGATGAGGGCCTaGGGGAAGTTGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHTLMRA*GKLSKL
Trigger: CAACTTTGACAACTTCCCCCAGGCCCTCATCAGTGT...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACGGATGCCTTCACCCTTaGACTTCTGCTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHGCLHP*TSAPVS
Trigger: AGAAACTGGAGCAGAAGTCCAAGGGTGAAGGCATCC...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp AGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGTTCTCTGAGTCTTCACCACGGAGATaGCGCTGGACTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RGKVKMAWYSSARPRFSESSPRR*RWTRGP
Trigger: TGGGCCTCGAGTCCAGCGCCATCTCCGTGGTGAAGA...CTCAGAGAACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCGTGCTTCAACCCTTTaGCTCTGTTTATGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGRASTL*LCLWPG
Trigger: TCCGGGCCATAAACAGAGCCAAAGGGTTGAAGCACG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCAGCTCTATCTGAGTaGGGTCTCCATCCTTGTATA +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMAALSE*GLHPCI
Trigger: TATACAAGGATGGAGACCCCACTCAGATAGAGCTGC...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGTCATTGTGTATCCACTaGCGGGGACGCAGCTCTATC +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGSLCIH*RGRSSI
Trigger: GATAGAGCTGCGTCCCCGCCAGTGGATACACAATGA...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGTGTACGCATTGGCGCTaGTTCTTGTCGAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGCTHWR*FLSSSQ
Trigger: CTGTGAGCTCGACAAGAACCAGCGCCAATGCGTACA...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAACTGGTATGGGTTTTTaGGGATGTAACACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPTGMGF*GCNTSV
Trigger: CACTGAGGTGTTACATCCCCAAAAACCCATACCAGT...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCAGAATGTCTGAGATGTaGTTCATCTGTTCCGACTGG +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASRMSEM*FICSDW
Trigger: CCAGTCGGAACAGATGAACCACATCTCAGACATTCT...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCATTGGAGGGATGACTTaGTCCAAGAGCTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSIGGMT*SKSFML
Trigger: CAGCATGAAGCTCTTGGACCAAGTCATCCCTCCAAT...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCTCATCATCTCCTATTaGAGGGATGACTTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASLIISY*RDDLVQ
Trigger: TTGGACCAAGTCATCCCTCCAATAGGAGATGATGAG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCACTCATCATCTCCTATTaGAGGGATGACTTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPLIISY*RDDLVQ
Trigger: TTGGACCAAGTCATCCCTCCAATAGGAGATGATGAG...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTCAGGTCTCCAGAGATaGCACGGTGGATCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GVGGGLWPKSQGYSFETGSGLQR*HGGSQE
Trigger: CTCCTGAGATCCACCGTGCCATCTCTGGAGACCTGA...ACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCAGGGGGCAGAGAGTTaGTCCTTTCCAGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGQGAES*SFPGSC
Trigger: ACAACTTCCTGGAAAGGACCAACTCTCTGCCCCCTG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGAAGAGGGTGGGTGCCTaGGTTCTGAGGGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RWRWTLAKVTGLQLRNRLKRVGA*VLREVL
Trigger: GAGGACTTCCCTCAGAACCCAGGCACCCACCCTCTT...CAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCCAAAGTTCCTGCTGTTaGGTGTTTCCAGAAACCGTG +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSQSSCC*VFPETV
Trigger: CACGGTTTCTGGAAACACCCAACAGCAGGAACTTTG...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR TCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACGTTCCAGAATCACAGTaGAGACCCCCAGAAAGACAA +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHVPESQ*RPPERQ
Trigger: TTGTCTTTCTGGGGGTCTTCACTGTGATTCTGGAAC...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR TCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTCCATGGAGATGCATTaGTACACAGTGAGCATAGAG +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMSMEMH*YTVSIE
Trigger: CTCTATGCTCACTGTGTATCAATGCATCTCCATGGA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTGTAGAACTTTCCCTTaGAAAGCTGCACTCCAATGC +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMCRTFP*KAALQC
Trigger: GCATTGGAGTGCAGCTTTTCAAGGGAAAGTTCTACA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCTGTAGAACTTTCCCTTaGAAAGCTGCACTCCAATGC +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSCRTFP*KAALQC
Trigger: GCATTGGAGTGCAGCTTTTCAAGGGAAAGTTCTACA...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACCAAAGTAGGAGGAAGTaGCGACATACCACACCTGAT +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHQSRRK*RHTTPD
Trigger: ATCAGGTGTGGTATGTCGTCACTTCCTCCTACTTTG...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTCAAAGTAGGAGGAAGTaGCGACATACCACACCTGAT +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAQSRRK*RHTTPD
Trigger: ATCAGGTGTGGTATGTCGTCACTTCCTCCTACTTTG...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCCACGTTGAGAATGTCTaGGATGTGGTTCATCTGTTC +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSHVENV*DVVHLF
Trigger: GAACAGATGAACCACATCTCAGACATTCTCAACGTG...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCACGTTGAGAATGTCTaGGATGTGGTTCATCTGTTC +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMHVENV*DVVHLF
Trigger: GAACAGATGAACCACATCTCAGACATTCTCAACGTG...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCTCCTATTGGAGGGATaGCTTGGTCCAAGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGLLLEG*LGPRAS
Trigger: TGAAGCTCTTGGACCAAGTCATCCCTCCAATAGGAG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACGGAAGTGCTCCTGGATaGGGAATGTGGCATAGAATT +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHGSAPG*GMWHRI
Trigger: AATTCTATGCCACATTCCTCATCCAGGAGCACTTCC...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACCATCCAAAGACAGCTTaGCTTCTCTCAAGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHHPKTA*LLSSRP
Trigger: TGGACGACTTGAGAGAAGGCAAGCTGTCTTTGGATG...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp CTGCAAGGCCCAGGTTCTCTGAGAAAGGGGGTAGAGGGAGTTCCAGATGTTCTAAGTGGCTGGTTGTGGTaGTCCGAGGCAATGGACAGG +
Preference number: 4 (lower is better)
Translates to: LQGPGSLRKGVEGVPDVLSGWLW*SEAMDR
Trigger: CCTGTCCATTGCCTCGGAGCACCACAACCAGCCACT...TAGAACATCTGGAACTCCCTCTACCCCCTTTCTCAGAGAACCTGGGCCTTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp TTGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTGAGGCCACCAGGTTaGTCAGCGATGTCCAGTACT +
Preference number: 4 (lower is better)
Translates to: LALAVDSGQSHRVTASKQVRPPG*SAMSST
Trigger: AGTACTGGACATCGCTGAGCAACCTGGTGGCCTCAC...CTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCCTTCAAAGTCATATCTaGCTCCAAAGAGCTGCATGC +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSLQSHI*LQRAAC
Trigger: GCATGCAGCTCTTTGGAGGCAGATATGACTTTGAAG...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTTTCCCTTGAAAAGCTaGACTCCAATGCACGCAAAC +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMFPLKS*TPMHAN
Trigger: GTTTGCGTGCATTGGAGTGCAGCTTTTCAAGGGAAA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTGTAGTAGTAGCCCCTaGATTCCTCTTCAGTCATCT +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMCSSSP*IPLQSS
Trigger: AGATGACTGAAGAGGAATGCAGGGGCTACTACTACA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp AAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGTTCTCTGAGAAAGGGGGTAGAGAGCAAGAGGGTGGGTaGCTGGGTTCTGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: KMAWYSSARPRFSEKGGREQEGG*LGSEGS
Trigger: ACTTCCCTCAGAACCCAGGCACCCACCCTCTTGCTC...TCTACCCCCTTTCTCAGAGAACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGGTTGTTTCTATGGCTaGTGTTGCCATAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMGCFYG*CCHRQH
Trigger: ATGTTGCCTATGGCAACAGCAGCCATAGAAACAACC...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTCCCTTTCCCTCTTTCTaGACAGGATGCTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAPFPSF*TGCSAF
Trigger: AAAAGCAGAGCATCCTGTGCAGAAAGAGGGAAAGGG...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCAGGTTCCCCTGGACTTaGCCTTCTCTCGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LAVDSGQSHRVTASKQVGRFPWT*PSLALW
Trigger: CCAAAGAGCGAGAGAAGGCCAAGTCCAGGGGAACCT...GCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCGGTGCTCCGAGGCAATaGACAGGGTGTTTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: LAVDSGQSHRVTASKQVGGAPRQ*TGCLGQ
Trigger: TTGCCCTAAACACCCTGTCCATTGCCTCGGAGCACC...GCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGTCAGCAACACGCGGTTaGCAACATCTTGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGSATRG*QHLANG
Trigger: CCCATTTGCAAGATGTTGCCAACCGCGTGTTGCTGA...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGCAGCTCTATCTGAGTaGGGTCTCCATCCTTGTATA +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAAALSE*GLHPCI
Trigger: TATACAAGGATGGAGACCCCACTCAGATAGAGCTGC...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TTGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGATGTAACACCTCAGTaGGCGGGCCTTCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: LALAVDSGQSHRVTASKQDVTPQ*AGLQGI
Trigger: TATGCCCTGAAGGCCCGCCCACTGAGGTGTTACATC...CTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCTGCCTCTTCCTCTATaGTCCGTAATCCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGLPLPL*SVIQPV
Trigger: TACAGGCTGGATTACGGACCATAGAGGAAGAGGCAG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTATCTGCCTGGGAGAGCTaGCACGGGGAAGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALSAWES*HGEGGT
Trigger: GGTGCCTCCTTCCCCGTGCCAGCTCTCCCAGGCAGA...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112068.10
CDS-3UTR TCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTTCCATGGAGATGCATTaGTACACAGTGAGCATAGAG +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTASMEMH*YTVSIE
Trigger: CTCTATGCTCACTGTGTATCAATGCATCTCCATGGA...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTACGAGGCCCATGGAGATaGGGGACACAGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALRGPWR*GTQPPP
Trigger: TGGTGGTGGCTGTGTCCCTCATCTCCATGGGCCTCG...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR TCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTGTAGAACTTTCCCTTaGAAAGCTGCACTCCAATGC +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHCRTFP*KAALQC
Trigger: GCATTGGAGTGCAGCTTTTCAAGGGAAAGTTCTACA...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACAATCCAGCCTGTATCTaGACTGTGTCCTTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHNPACI*TVSFLG
Trigger: ACCCAAAAAGGACACAGTTCAGATACAGGCTGGATT...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp AGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGTTCTCTGAGAGGAAGTTGTCCACTTaGCCAAACAGGCCTCCCGTC +
Preference number: 4 (lower is better)
Translates to: RGKVKMAWYSSARPRFSERKLST*PNRPPV
Trigger: GACGGGAGGCCTGTTTGGTCAAGTGGACAACTTCCT...CTCAGAGAACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR TCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTATCTGCTGTGAGGTCCTaGGGCCCTGCAGGGCTGACT +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALSAVRS*GPAGLT
Trigger: AGTCAGCCCTGCAGGGCCTCAGGACCTCACAGCAGA...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR GCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGGAAGTTGTCAAAGTTaGTTCGTCGTACTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSGSCQS*FVVLLC
Trigger: ACACAGAAGTACGACGAAGCAACTTTGACAACTTCC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGTTGTTTCTATGGCTaGTGTTGCCATAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAGCFYG*CCHRQH
Trigger: ATGTTGCCTATGGCAACAGCAGCCATAGAAACAACC...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp AAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGTTCTCTGAGAAAGGGGGTAGATGTCCACATGAGATCTaGTGTGAGGTCCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: KMAWYSSARPRFSEKGGRCPHEI*CEVLRP
Trigger: GGGCCTCAGGACCTCACAGCAGATCTCATGTGGACA...TCTACCCCCTTTCTCAGAGAACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGTCTCATTCTCAACTGTaGCTACAATGTCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMSHSQL*LQCLSQ
Trigger: TTGGGACAGACATTGTAGCCACAGTTGAGAATGAGA...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp AAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGTTCTCTGAGAAAGGGGGTAGAGGATCTGATTCCTCATaGAGTCGGCCCGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: KMAWYSSARPRFSEKGGRGSDSS*SRPGWD
Trigger: ATCCCATCCGGGCCGACTCCATGAGGAATCAGATCC...TCTACCCCCTTTCTCAGAGAACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCTCCCGATGGTGCGAATaGCAACAAACACGCACTGCA +
Preference number: 4 (lower is better)
Translates to: LAVDSGQSHRVTASKQVGSRWCE*QQTRTA
Trigger: TGCAGTGCGTGTTTGTTGCCATTCGCACCATCGGGA...GCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCCCTCTTCAGTCATCTTaGATAAGTCATTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSPLQSS*ISHCSC
Trigger: ACAGCTGCAATGACTTATCCAAGATGACTGAAGAGG...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCCTCTTCAGTCATCTTaGATAAGTCATTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMPLQSS*ISHCSC
Trigger: ACAGCTGCAATGACTTATCCAAGATGACTGAAGAGG...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACCCTCATTTGAGTCTATaGCCTTGTACAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHPHLSL*PCTVAE
Trigger: CTCAGCTACTGTACAAGGCCATAGACTCAAATGAGG...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACAGAATGTCTGAGATGTaGTTCATCTGTTCCGACTGG +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHRMSEM*FICSDW
Trigger: CCAGTCGGAACAGATGAACCACATCTCAGACATTCT...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGATTGGAGGGATGACTTaGTCCAAGAGCTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGIGGMT*SKSFML
Trigger: CAGCATGAAGCTCTTGGACCAAGTCATCCCTCCAAT...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGTTCATAGCAGATGCTaGAAAACACTGGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSVHSRC*KTLGCF
Trigger: GAAACAACCCAGTGTTTTCCAGCATCTGCTATGAAC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp AATGCCATCAGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGCACCTCGACTTCCTCTaGTTCCATCTGGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: NAIRGKVKMAWYSSARPRHLDFL*FHLAGI
Trigger: GATGCCTGCCAGATGGAACCAGAGGAAGTCGAGGTG...CCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCTGATGGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR TCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGTCCATGGAGATGCATTaGTACACAGTGAGCATAGAG +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGSMEMH*YTVSIE
Trigger: CTCTATGCTCACTGTGTATCAATGCATCTCCATGGA...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp CGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGCAAGCTCTCTGTGTCTaGTCCCCCTTCATCCAAAGA +
Preference number: 4 (lower is better)
Translates to: RWRWTLAKVTGLQLRNRLQALCV*SPFIQR
Trigger: TCTTTGGATGAAGGGGGATCAGACACAGAGAGCTTG...CAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR TCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGTGTAGAACTTTCCCTTaGAAAGCTGCACTCCAATGC +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGCRTFP*KAALQC
Trigger: GCATTGGAGTGCAGCTTTTCAAGGGAAAGTTCTACA...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp AATGCCATCAGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGGGAGACCGTGAAGAGTaGCATCATAGCGGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: NAIRGKVKMAWYSSARPRGDREE*HHSGEY
Trigger: GTACTCTCCGCTATGATGTCACTCTTCACGGTCTCC...CCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCTGATGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR TCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGACGACATACCACACCTaGTACTGGTATGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGTTYHT*YWYGFL
Trigger: CAAAAACCCATACCAGTATCAGGTGTGGTATGTCGT...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCACGTTGAGAATGTCTaGGATGTGGTTCATCTGTTC +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGHVENV*DVVHLF
Trigger: GAACAGATGAACCACATCTCAGACATTCTCAACGTG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp GGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTGGAAGTGCTCCTGGATaGGGAATGTGGCATAGAATT +
Preference number: 4 (lower is better)
Translates to: GVGGGLWPKSQGYSFETGGSAPG*GMWHRI
Trigger: AATTCTATGCCACATTCCTCATCCAGGAGCACTTCC...ACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR TCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGAATCCAGCCTGTATCTaGACTGTGTCCTTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGNPACI*TVSFLG
Trigger: ACCCAAAAAGGACACAGTTCAGATACAGGCTGGATT...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp AATGCCATCAGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGAGGTCCTCCTCCAGCTaGTGTTTCTCTCGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: NAIRGKVKMAWYSSARPRRSSSS*CFSRSF
Trigger: AAAGCTCCGAGAGAAACAGCAGCTGGAGGAGGACCT...CCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCTGATGGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACGGAAGTTGTCAAAGTTaGTTCGTCGTACTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHGSCQS*FVVLLC
Trigger: ACACAGAAGTACGACGAAGCAACTTTGACAACTTCC...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGTTTCCCTTGAAAAGCTaGACTCCAATGCACGCAAAC +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGFPLKS*TPMHAN
Trigger: GTTTGCGTGCATTGGAGTGCAGCTTTTCAAGGGAAA...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR GCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGGGTTGTTTCTATGGCTaGTGTTGCCATAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGGCFYG*CCHRQH
Trigger: ATGTTGCCTATGGCAACAGCAGCCATAGAAACAACC...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCTCATTCTCAACTGTaGCTACAATGTCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHSHSQL*LQCLSQ
Trigger: TTGGGACAGACATTGTAGCCACAGTTGAGAATGAGA...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CCA 90 bp GTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCAGTCCACCCCTCCATaGAGATGCATTGATACACAG +
Preference number: 4 (lower is better)
Translates to: VGGGLWPKSQGYSFETGWQSTPP*RCIDTQ
Trigger: CTGTGTATCAATGCATCTCCATGGAGGGGTGGACTG...CCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp GTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGGATTTCACTAGGTCATaGCACTTCCAGCGGAAGACG +
Preference number: 4 (lower is better)
Translates to: VGGGLWPKSQGYSFETGWDFTRS*HFQRKT
Trigger: CGTCTTCCGCTGGAAGTGCCATGACCTAGTGAAATC...CCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TTGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGTCAGCAACACGCGGTTaGCAACATCTTGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: LALAVDSGQSHRVTASKQSATRG*QHLANG
Trigger: CCCATTTGCAAGATGTTGCCAACCGCGTGTTGCTGA...CTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TTGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGTCAGCCTTGGCCTTTTaGGCAGATGTCAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: LALAVDSGQSHRVTASKQSALAF*ADVRLS
Trigger: AGAGAGTCTGACATCTGCCCAAAAGGCCAAGGCTGA...CTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTCCTCTTCAGTCATCTTaGATAAGTCATTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAPLQSS*ISHCSC
Trigger: ACAGCTGCAATGACTTATCCAAGATGACTGAAGAGG...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp AGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGTTCTCTGAGTCATTGTGTATCCACTaGCGGGGACGCAGCTCTATC +
Preference number: 4 (lower is better)
Translates to: RGKVKMAWYSSARPRFSESLCIH*RGRSSI
Trigger: GATAGAGCTGCGTCCCCGCCAGTGGATACACAATGA...CTCAGAGAACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCAGTACATTGTCAAAGTaGAAGTCATTGTGTATCCAC +
Preference number: 4 (lower is better)
Translates to: ILLLADEEKGRPCPPMASSTLSK*KSLCIH
Trigger: GTGGATACACAATGACTTCCACTTTGACAATGTACT...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGACTGGTATGGGTTTTTaGGGATGTAACACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGTGMGF*GCNTSV
Trigger: CACTGAGGTGTTACATCCCCAAAAACCCATACCAGT...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACCACCTGATACTGGTATaGGTTTTTGGGGATGTAACA +
Preference number: 4 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHHLILV*VFGDVT
Trigger: TGTTACATCCCCAAAAACCCATACCAGTATCAGGTG...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TGGCTCTGGTGTAACCAGGGTGTGGCATTTCTTCTAATGCCATCAGAGGGAAAGGGCGGAAGAAGGCACTaGAGATACGGGCGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: WLWCNQGVAFLLMPSEGKGGRRH*RYGRSH
Trigger: ATGAGAGCGCCCGTATCTCCAGTGCCTTCTTCCGCC...CTTTCCCTCTGATGGCATTAGAAGAAATGCCACACCCTGGTTACACCAGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp CTGCAAGGCCCAGGTTCTCTGAGAAAGGGGGTAGAGGGAGTTCCAGATGTTCTAACGTACGGCAGGGCCTaGAAGGACTTGATGAATGTC +
Preference number: 4 (lower is better)
Translates to: LQGPGSLRKGVEGVPDVLTYGRA*KDLMNV
Trigger: GACATTCATCAAGTCCTTCCAGGCCCTGCCGTACGT...TAGAACATCTGGAACTCCCTCTACCCCCTTTCTCAGAGAACCTGGGCCTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp GGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCTCTGGCTGCCTCTTCCTCTATaGTCCGTAATCCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: GGLWPKSQGYSFETGWLWLPLPL*SVIQPV
Trigger: TACAGGCTGGATTACGGACCATAGAGGAAGAGGCAG...CCAGAGCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGTTCATAGCAGATGCTaGAAAACACTGGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAVHSRC*KTLGCF
Trigger: GAAACAACCCAGTGTTTTCCAGCATCTGCTATGAAC...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR TCA 90 bp AATGCCATCAGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGCTCCTATTGGAGGGATaGCTTGGTCCAAGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: NAIRGKVKMAWYSSARPRLLLEG*LGPRAS
Trigger: TGAAGCTCTTGGACCAAGTCATCCCTCCAATAGGAG...CCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCTGATGGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR TCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTATGGGTGCCTGGGTTCTaGGGGAAGTCCTCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALWVPGF*GKSSKK
Trigger: CTTCTTGGAGGACTTCCCTCAGAACCCAGGCACCCA...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR GCA 90 bp TTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCCGGTTGGCAACATCTTaGAAATGGGTCAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: LAVDSGQSHRVTASKQVGRLATS*KWVNQS
Trigger: ACTCTGGTTGACCCATTTGCAAGATGTTGCCAACCG...GCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTAGCTTTCTCTTTCAGCTaGAGCTCGGCCAGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALAFSFS*SSARGR
Trigger: ACGCCCTCTGGCCGAGCTGCAGCTGAAAGAGAAAGC...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR GCA 90 bp TGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGGGTTGTTTCTATGGCTaGTGTTGCCATAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: WRWRWTLAKVTGLQLRNRGCFYG*CCHRQH
Trigger: ATGTTGCCTATGGCAACAGCAGCCATAGAAACAACC...CCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp TTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCGCTCCTCAAAGTTCCTaGTGTTGGGTGTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LAVDSGQSHRVTASKQVGAPQSS*CWVFPE
Trigger: TTCTGGAAACACCCAACAGCAGGAACTTTGAGGAGC...GCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp CTGCAAGGCCCAGGTTCTCTGAGAAAGGGGGTAGAGGGAGTTCCAGATGTTCTAGGATGCCTTCACCCTTaGACTTCTGCTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LQGPGSLRKGVEGVPDVLGCLHP*TSAPVS
Trigger: AGAAACTGGAGCAGAAGTCCAAGGGTGAAGGCATCC...TAGAACATCTGGAACTCCCTCTACCCCCTTTCTCAGAGAACCTGGGCCTTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGAGTACATTGTCAAAGTaGAAGTCATTGTGTATCCAC +
Preference number: 4 (lower is better)
Translates to: CRILLLADEEKGRPCPPMSTLSK*KSLCIH
Trigger: GTGGATACACAATGACTTCCACTTTGACAATGTACT...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCAGTACATTGTCAAAGTaGAAGTCATTGTGTATCCAC +
Preference number: 4 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSSTLSK*KSLCIH
Trigger: GTGGATACACAATGACTTCCACTTTGACAATGTACT...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCACCTGATACTGGTATaGGTTTTTGGGGATGTAACA +
Preference number: 4 (lower is better)
Translates to: LRWFPTTATQSIQLATEGHLILV*VFGDVT
Trigger: TGTTACATCCCCAAAAACCCATACCAGTATCAGGTG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp TTGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGATTGGAGGGATGACTTaGTCCAAGAGCTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: LALAVDSGQSHRVTASKQIGGMT*SKSFML
Trigger: CAGCATGAAGCTCTTGGACCAAGTCATCCCTCCAAT...CTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp GGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTCTCATCATCTCCTATTaGAGGGATGACTTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: GVGGGLWPKSQGYSFETGLIISY*RDDLVQ
Trigger: TTGGACCAAGTCATCCCTCCAATAGGAGATGATGAG...ACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR TCA 90 bp TTGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGAATCCAGCCTGTATCTaGACTGTGTCCTTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: LALAVDSGQSHRVTASKQNPACI*TVSFLG
Trigger: ACCCAAAAAGGACACAGTTCAGATACAGGCTGGATT...CTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp AGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGTTCTCTGAGCATCCAAAGACAGCTTaGCTTCTCTCAAGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RGKVKMAWYSSARPRFSEHPKTA*LLSSRP
Trigger: TGGACGACTTGAGAGAAGGCAAGCTGTCTTTGGATG...CTCAGAGAACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp GGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCTCTGGTTTCCCTTGAAAAGCTaGACTCCAATGCACGCAAAC +
Preference number: 4 (lower is better)
Translates to: GGLWPKSQGYSFETGWLWFPLKS*TPMHAN
Trigger: GTTTGCGTGCATTGGAGTGCAGCTTTTCAAGGGAAA...CCAGAGCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp TGGCTCTGGTGTAACCAGGGTGTGGCATTTCTTCTAATGCCATCAGAGGGAAAGCACCAGCCTCTTACATaGTACCCTGTGTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: WLWCNQGVAFLLMPSEGKHQPLT*YPVWAE
Trigger: TTCTGCCCACACAGGGTAGCATGTAAGAGGCTGGTG...CTTTCCCTCTGATGGCATTAGAAGAAATGCCACACCCTGGTTACACCAGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTATGTCCACATGAGATCTaGTGTGAGGTCCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALCPHEI*CEVLRP
Trigger: GGGCCTCAGGACCTCACAGCAGATCTCATGTGGACA...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR CCA 90 bp TGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTCTCATTCTCAACTGTaGCTACAATGTCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: WRWRWTLAKVTGLQLRNRSHSQL*LQCLSQ
Trigger: TTGGGACAGACATTGTAGCCACAGTTGAGAATGAGA...CCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTAGTACATTGTCAAAGTaGAAGTCATTGTGTATCCAC +
Preference number: 4 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTASTLSK*KSLCIH
Trigger: GTGGATACACAATGACTTCCACTTTGACAATGTACT...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CCA 90 bp GGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCTCTGGCCTCATTTGAGTCTATaGCCTTGTACAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GGLWPKSQGYSFETGWLWPHLSL*PCTVAE
Trigger: CTCAGCTACTGTACAAGGCCATAGACTCAAATGAGG...CCAGAGCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR TCA 90 bp AAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGTTCTCTGAGAAAGGGGGTAGAACGACATACCACACCTaGTACTGGTATGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: KMAWYSSARPRFSEKGGRTTYHT*YWYGFL
Trigger: CAAAAACCCATACCAGTATCAGGTGTGGTATGTCGT...TCTACCCCCTTTCTCAGAGAACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp AATGCCATCAGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGCTTCAAAGTCATATCTaGCTCCAAAGAGCTGCATGC +
Preference number: 4 (lower is better)
Translates to: NAIRGKVKMAWYSSARPRLQSHI*LQRAAC
Trigger: GCATGCAGCTCTTTGGAGGCAGATATGACTTTGAAG...CCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCTGATGGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTATTTGGAAGGTTCCCCTaGACTTGGCCTTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALFGRFP*TWPSLA
Trigger: AGCGAGAGAAGGCCAAGTCCAGGGGAACCTTCCAAA...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR CCA 90 bp TTGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGCACCTGATACTGGTATaGGTTTTTGGGGATGTAACA +
Preference number: 4 (lower is better)
Translates to: LALAVDSGQSHRVTASKQHLILV*VFGDVT
Trigger: TGTTACATCCCCAAAAACCCATACCAGTATCAGGTG...CTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTAACGTACGGCAGGGCCTaGAAGGACTTGATGAATGTC +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALTYGRA*KDLMNV
Trigger: GACATTCATCAAGTCCTTCCAGGCCCTGCCGTACGT...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR TCA 90 bp TGGCTCTGGTGTAACCAGGGTGTGGCATTTCTTCTAATGCCATCAGAGGGAAAGGTTCCAGAATCACAGTaGAGACCCCCAGAAAGACAA +
Preference number: 4 (lower is better)
Translates to: WLWCNQGVAFLLMPSEGKVPESQ*RPPERQ
Trigger: TTGTCTTTCTGGGGGTCTTCACTGTGATTCTGGAAC...CTTTCCCTCTGATGGCATTAGAAGAAATGCCACACCCTGGTTACACCAGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR TCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTACAAGCTCTCTGTGTCTaGTCCCCCTTCATCCAAAGA +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALQALCV*SPFIQR
Trigger: TCTTTGGATGAAGGGGGATCAGACACAGAGAGCTTG...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR GCA 90 bp CTGCAAGGCCCAGGTTCTCTGAGAAAGGGGGTAGAGGGAGTTCCAGATGTTCTAGGAAGTTGTCAAAGTTaGTTCGTCGTACTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LQGPGSLRKGVEGVPDVLGSCQS*FVVLLC
Trigger: ACACAGAAGTACGACGAAGCAACTTTGACAACTTCC...TAGAACATCTGGAACTCCCTCTACCCCCTTTCTCAGAGAACCTGGGCCTTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR GCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTACTTTCGACATCTTCCTaGGCTTTCTCTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALLSTSS*AFSPQP
Trigger: AGGCTGAGGAGAGAAAGCGCAGGAAGATGTCGAAAG...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR GCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTATCACCCTTGGACTTCTaGTCCAGTTTCTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALSPLDF*SSFLVT
Trigger: GGTGACCAAGAAACTGGAGCAGAAGTCCAAGGGTGA...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR GCA 90 bp ATTTCTTCTAATGCCATCAGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCACAGGGCCTGGCCTGTTaGCATGACGAAGTTAGCATC +
Preference number: 4 (lower is better)
Translates to: ISSNAIRGKVKMAWYSSAQGLAC*HDEVSI
Trigger: GATGCTAACTTCGTCATGGCAACAGGCCAGGCCCTG...TGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCTGATGGCATTAGAAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTACAGTCCACCCCTCCATaGAGATGCATTGATACACAG +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALQSTPP*RCIDTQ
Trigger: CTGTGTATCAATGCATCTCCATGGAGGGGTGGACTG...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR CCA 90 bp AGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGTTCTCTGAGGTTCATAGCAGATGCTaGAAAACACTGGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: RGKVKMAWYSSARPRFSEVHSRC*KTLGCF
Trigger: GAAACAACCCAGTGTTTTCCAGCATCTGCTATGAAC...CTCAGAGAACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR TCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTACAAAGTAGGAGGAAGTaGCGACATACCACACCTGAT +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALQSRRK*RHTTPD
Trigger: ATCAGGTGTGGTATGTCGTCACTTCCTCCTACTTTG...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR GCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTACGGTTGGCAACATCTTaGAAATGGGTCAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALRLATS*KWVNQS
Trigger: ACTCTGGTTGACCCATTTGCAAGATGTTGCCAACCG...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR CCA 90 bp ATTTCTTCTAATGCCATCAGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCACGTGCTTCAACCCTTTaGCTCTGTTTATGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: ISSNAIRGKVKMAWYSSARASTL*LCLWPG
Trigger: TCCGGGCCATAAACAGAGCCAAAGGGTTGAAGCACG...TGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCTGATGGCATTAGAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTACCTCATTTGAGTCTATaGCCTTGTACAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALPHLSL*PCTVAE
Trigger: CTCAGCTACTGTACAAGGCCATAGACTCAAATGAGG...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR GCA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTAGGAAGTTGTCAAAGTTaGTTCGTCGTACTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALGSCQS*FVVLLC
Trigger: ACACAGAAGTACGACGAAGCAACTTTGACAACTTCC...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR CCA 90 bp ATTTCTTCTAATGCCATCAGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCAAGAATGTCTGAGATGTaGTTCATCTGTTCCGACTGG +
Preference number: 4 (lower is better)
Translates to: ISSNAIRGKVKMAWYSSARMSEM*FICSDW
Trigger: CCAGTCGGAACAGATGAACCACATCTCAGACATTCT...TGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCTGATGGCATTAGAAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
3UTR CAA 72 bp GCTAACCTACTTCTCCACTCCAGCACTTTCTGGCTTTaGGTCATGGTATTTCTAAGCTTGTGTCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: ANLLLHSSTFWL*VMVFLSLCHSV
Trigger: TACAGAATGACACAAGCTTAGAAATACCATGACCAAAAGCCAGAAAGTGCTGGAGTGGAGAAGTAGGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTCCAAGCCGGCTCCTTaGCTGCTCATGGGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRSKPAP*LLMGAV
Trigger: CACGGCCCCCATGAGCAGCAAAGGAGCCGGCTTGGA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CAA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGGGCCAGCAGGATCTCTaGCCAGGCTTCCCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRGQQDL*PGFPCG
Trigger: GCCACAGGGGAAGCCTGGCAAGAGATCCTGCTGGCC...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTGGGTGATGCCGTGGTaGGGTCCTGGCCAACCTCCT +
Preference number: 5 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRWVMPW*GPGQPP
Trigger: AGGAGGTTGGCCAGGACCCAACCACGGCATCACCCA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAGGCCAGCAGGATCTCTaGCCAGGCTTCCCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPGQQDL*PGFPCG
Trigger: GCCACAGGGGAAGCCTGGCAAGAGATCCTGCTGGCC...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTGGAGGGGTCTTTGGTaGGCCATGACAGGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRWRGLW*AMTGGR
Trigger: TCTGCCCCCTGTCATGGCCAACCAAAGACCCCTCCA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS GCA 90 bp CCCCGGGTGCGTAGTCAGACTCCGGGTCACACAGCTTCCCATAGCTaGAGGCCAGCAGGATCTCTTGCCAGGCTTCCCCTGTGGCACACC +
Preference number: 5 (lower is better)
Translates to: PRVRSQTPGHTASHS*RPAGSLARLPLWHT
Trigger: GGTGTGCCACAGGGGAAGCCTGGCAAGAGATCCTGCTGGCCTGCAGCTATGGGAAGCTGTGTGACCCGGAGTCTGACTACGCACCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 90 bp CTCTTTCAGCTGCAGCTCGGCCAGAGGGCGTGGTCGGGGGCTCACTaGGATCTCGGGCTCATCTTCCTCATCGTCCCCTGGGAAGTCAGC +
Preference number: 5 (lower is better)
Translates to: LFQLQLGQRAWSGAH*DLGLIFLIVPWEVS
Trigger: GCTGACTTCCCAGGGGACGATGAGGAAGATGAGCCCGAGATCCCAGTGAGCCCCCGACCACGCCCTCTGGCCGAGCTGCAGCTGAAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGAGTGAGGCCACCAGGTaGCTCAGCGATGTCCAGTAC +
Preference number: 5 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRSEATR*LSDVQY
Trigger: GTACTGGACATCGCTGAGCAACCTGGTGGCCTCACT...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTTCTGCTCCAGTTTCTaGGTCACCGTGGCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRFCSSF*VTVALS
Trigger: GGAGAGGGCCACGGTGACCAAGAAACTGGAGCAGAA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCGCCCGGTTCAGCAGCTaGACCAGTCTCATGACCCGG +
Preference number: 5 (lower is better)
Translates to: ILLLADEEKGRPCPPMASARFSS*TSLMTR
Trigger: CCGGGTCATGAGACTGGTCAAGCTGCTGAACCGGGC...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAAGCCGGCTCCTTaGCTGCTCATGGGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHSKPAP*LLMGAV
Trigger: CACGGCCCCCATGAGCAGCAAAGGAGCCGGCTTGGA...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CAA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCTGGGTGATGCCGTGGTaGGGTCCTGGCCAACCTCCT +
Preference number: 5 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSWVMPW*GPGQPP
Trigger: AGGAGGTTGGCCAGGACCCAACCACGGCATCACCCA...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCATGGAGCGGATGGAGTaGAGCAGTGAGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: ILLLADEEKGRPCPPMASMERME*SSEATR
Trigger: CCTGGTGGCCTCACTGCTCAACTCCATCCGCTCCAT...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGCTCTCCTCTTCTGACTaGTCTGGGAGCCCTTTCGAC +
Preference number: 5 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRLSSSD*SGSPFD
Trigger: GTCGAAAGGGCTCCCAGACAAGTCAGAAGAGGAGAG...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGGGCATACTGTACGCATaGGCGCTGGTTCTTGTCGAG +
Preference number: 5 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRGILYA*ALVLVE
Trigger: CTCGACAAGAACCAGCGCCAATGCGTACAGTATGCC...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGCCCGGTTCAGCAGCTaGACCAGTCTCATGACCCGG +
Preference number: 5 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSARFSS*TSLMTR
Trigger: CCGGGTCATGAGACTGGTCAAGCTGCTGAACCGGGC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCCAGCAGGATCTCTaGCCAGGCTTCCCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAGQQDL*PGFPCG
Trigger: GCCACAGGGGAAGCCTGGCAAGAGATCCTGCTGGCC...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGAGGGGTCTTTGGTaGGCCATGACAGGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPWRGLW*AMTGGR
Trigger: TCTGCCCCCTGTCATGGCCAACCAAAGACCCCTCCA...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTTGGGTGATGCCGTGGTaGGGTCCTGGCCAACCTCCT +
Preference number: 5 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAWVMPW*GPGQPP
Trigger: AGGAGGTTGGCCAGGACCCAACCACGGCATCACCCA...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAAGTGAGGCCACCAGGTaGCTCAGCGATGTCCAGTAC +
Preference number: 5 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPSEATR*LSDVQY
Trigger: GTACTGGACATCGCTGAGCAACCTGGTGGCCTCACT...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTCTGCCTCTGCCAGGTaGTCCACAGCAATAGCCAGG +
Preference number: 5 (lower is better)
Translates to: ILLLADEEKGRPCPPMASSASAR*STAIAR
Trigger: CCTGGCTATTGCTGTGGACAACCTGGCAGAGGCAGA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGCACAGGACACGGATCTaGTTGGTGGGACTGAAGATG +
Preference number: 5 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRHRTRI*LVGLKM
Trigger: CATCTTCAGTCCCACCAACAAGATCCGTGTCCTGTG...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS GCA 90 bp TTGGGTGTTTCCAGAAACCGTGACGTGGGGCCCTTTCCCTCTTTCTaGACAGGATGCTCTGCCTGGGAGAGCTGGCACGGGGAAGGAGGC +
Preference number: 5 (lower is better)
Translates to: LGVSRNRDVGPFPSF*TGCSAWESWHGEGG
Trigger: GCCTCCTTCCCCGTGCCAGCTCTCCCAGGCAGAGCATCCTGTGCAGAAAGAGGGAAAGGGCCCCACGTCACGGTTTCTGGAAACACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CAA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAAAGGTTCCCCTGGACTaGGCCTTCTCTCGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPKVPLD*AFSRSL
Trigger: CAAAGAGCGAGAGAAGGCCAAGTCCAGGGGAACCTT...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTTTCTCTCGGAGCTTTaGGAAGGTTCCCCTGGACTT +
Preference number: 5 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRFLSEL*EGSPGL
Trigger: AAGTCCAGGGGAACCTTCCAAAAGCTCCGAGAGAAA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCACAGTACTTGGTGATCTaGAAGAGCCTCAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPQYLVI*KSLRRR
Trigger: CCGCCTCCTGAGGCTCTTCAAGATCACCAAGTACTG...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACATGGAGCGGATGGAGTaGAGCAGTGAGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHMERME*SSEATR
Trigger: CCTGGTGGCCTCACTGCTCAACTCCATCCGCTCCAT...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCTCTGCCTCTGCCAGGTaGTCCACAGCAATAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSSASAR*STAIAR
Trigger: CCTGGCTATTGCTGTGGACAACCTGGCAGAGGCAGA...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCACTCTCCTCTTCTGACTaGTCTGGGAGCCCTTTCGAC +
Preference number: 5 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPLSSSD*SGSPFD
Trigger: GTCGAAAGGGCTCCCAGACAAGTCAGAAGAGGAGAG...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTGGAGGGGTCTTTGGTaGGCCATGACAGGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHWRGLW*AMTGGR
Trigger: TCTGCCCCCTGTCATGGCCAACCAAAGACCCCTCCA...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCTCCAAGCCGGCTCCTTaGCTGCTCATGGGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: LAVDSGQSHRVTASKQVGSKPAP*LLMGAV
Trigger: CACGGCCCCCATGAGCAGCAAAGGAGCCGGCTTGGA...GCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAGCCTTCTCTCGCTCTTaGGTGAATTCTCCACTCAGG +
Preference number: 5 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPAFSRS*VNSPLR
Trigger: CCTGAGTGGAGAATTCACCAAAGAGCGAGAGAAGGC...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGAAGCAGTCGAAGCGGTaGAAGATGGACATGAAGTAC +
Preference number: 5 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRKQSKR*KMDMKY
Trigger: GTACTTCATGTCCATCTTCAACCGCTTCGACTGCTT...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTTCTGCCTCTGCCAGGTaGTCCACAGCAATAGCCAGG +
Preference number: 5 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTASASAR*STAIAR
Trigger: CCTGGCTATTGCTGTGGACAACCTGGCAGAGGCAGA...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCTCAGCCTTGGCCTTTaGGGCAGATGTCAGACTCTC +
Preference number: 5 (lower is better)
Translates to: CRILLLADEEKGRPCPPMLSLGL*GRCQTL
Trigger: GAGAGTCTGACATCTGCCCAAAAGGCCAAGGCTGAG...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTTTCTGCTCCAGTTTCTaGGTCACCGTGGCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAFCSSF*VTVALS
Trigger: GGAGAGGGCCACGGTGACCAAGAAACTGGAGCAGAA...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGGCATACTGTACGCATaGGCGCTGGTTCTTGTCGAG +
Preference number: 5 (lower is better)
Translates to: CRILLLADEEKGRPCPPMGILYA*ALVLVE
Trigger: CTCGACAAGAACCAGCGCCAATGCGTACAGTATGCC...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGGCATACTGTACGCATaGGCGCTGGTTCTTGTCGAG +
Preference number: 5 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSGILYA*ALVLVE
Trigger: CTCGACAAGAACCAGCGCCAATGCGTACAGTATGCC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAACAGCCACAAAGAGGTaGATGATCAGGAAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPTATKR*MIRKAQ
Trigger: CTGCGCCTTCCTGATCATCAACCTCTTTGTGGCTGT...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCAAGTTGCCTTCTGTCTaGATCTTGAGGGCTGTGCGC +
Preference number: 5 (lower is better)
Translates to: ILLLADEEKGRPCPPMASKLPSV*ILRAVR
Trigger: GCGCACAGCCCTCAAGATCAAGACAGAAGGCAACTT...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTATTGGAGGGATGACTaGGTCCAAGAGCTTCATGCT +
Preference number: 5 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRYWRDD*VQELHA
Trigger: AGCATGAAGCTCTTGGACCAAGTCATCCCTCCAATA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGCTGGAAAACACTGGGTaGTTTCTATGGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRLENTG*FLWLLL
Trigger: CAACAGCAGCCATAGAAACAACCCAGTGTTTTCCAG...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCGCTTCAGTAGCTCTGTaGCTGCCACCTCGACTTCCT +
Preference number: 5 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSASVAL*LPPRLP
Trigger: AGGAAGTCGAGGTGGCAGCAACAGAGCTACTGAAGC...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCTTCAGTAGCTCTGTaGCTGCCACCTCGACTTCCT +
Preference number: 5 (lower is better)
Translates to: CRILLLADEEKGRPCPPMASVAL*LPPRLP
Trigger: AGGAAGTCGAGGTGGCAGCAACAGAGCTACTGAAGC...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCCCGAGGTTCAGAGTGTaGTTGTCATCCTCTGGCATG +
Preference number: 5 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSPRFRV*LSSSGM
Trigger: CATGCCAGAGGATGACAACAACACTCTGAACCTCGG...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CAA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCCGAGGTTCAGAGTGTaGTTGTCATCCTCTGGCATG +
Preference number: 5 (lower is better)
Translates to: CRILLLADEEKGRPCPPMPRFRV*LSSSGM
Trigger: CATGCCAGAGGATGACAACAACACTCTGAACCTCGG...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CAA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAATAGAGAAGCCAAAGTaGTCGAAGTGGGTGATGCCG +
Preference number: 5 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPIEKPK*SKWVMP
Trigger: CGGCATCACCCACTTCGACAACTTTGGCTTCTCTAT...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCATAGAGAAGCCAAAGTaGTCGAAGTGGGTGATGCCG +
Preference number: 5 (lower is better)
Translates to: ILLLADEEKGRPCPPMASIEKPK*SKWVMP
Trigger: CGGCATCACCCACTTCGACAACTTTGGCTTCTCTAT...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGCTCCATGGAGATGCATaGATACACAGTGAGCATAGA +
Preference number: 5 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRLHGDA*IHSEHR
Trigger: TCTATGCTCACTGTGTATCAATGCATCTCCATGGAG...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTTCTCTCGCTCTTaGGTGAATTCTCCACTCAGG +
Preference number: 5 (lower is better)
Translates to: CRILLLADEEKGRPCPPMAFSRS*VNSPLR
Trigger: CCTGAGTGGAGAATTCACCAAAGAGCGAGAGAAGGC...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACAAGGTTCCCCTGGACTaGGCCTTCTCTCGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHKVPLD*AFSRSL
Trigger: CAAAGAGCGAGAGAAGGCCAAGTCCAGGGGAACCTT...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTAAGGTTCCCCTGGACTaGGCCTTCTCTCGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAKVPLD*AFSRSL
Trigger: CAAAGAGCGAGAGAAGGCCAAGTCCAGGGGAACCTT...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCAGCGATGTCCAGTACTaGGTGATCTTGAAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: ILLLADEEKGRPCPPMASSDVQY*VILKSL
Trigger: GAGGCTCTTCAAGATCACCAAGTACTGGACATCGCT...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGATGGAGCGGATGGAGTaGAGCAGTGAGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: WRWRWTLAKVTGLQLRNRMERME*SSEATR
Trigger: CCTGGTGGCCTCACTGCTCAACTCCATCCGCTCCAT...CCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTCTCAGCCTTGGCCTTTaGGGCAGATGTCAGACTCTC +
Preference number: 5 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTALSLGL*GRCQTL
Trigger: GAGAGTCTGACATCTGCCCAAAAGGCCAAGGCTGAG...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGTTCTGCTCCAGTTTCTaGGTCACCGTGGCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LRWFPTTATQSIQLATEGFCSSF*VTVALS
Trigger: GGAGAGGGCCACGGTGACCAAGAAACTGGAGCAGAA...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAAAGAGCAGGATGAAGTaGGTGAACCAGGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPKSRMK*VNQVAL
Trigger: CAATGCCACCTGGTTCACCAACTTCATCCTGCTCTT...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp AATGCCATCAGAGGGAAAGTGAAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGGGCCAGCAGGATCTCTaGCCAGGCTTCCCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: NAIRGKVKMAWYSSARPRGQQDL*PGFPCG
Trigger: GCCACAGGGGAAGCCTGGCAAGAGATCCTGCTGGCC...CCTGGGCCTTGCAGAAGAGTACCAGGCCATCTTCACTTTCCCTCTGATGGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGACAGCCACAAAGAGGTaGATGATCAGGAAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: CRILLLADEEKGRPCPPMTATKR*MIRKAQ
Trigger: CTGCGCCTTCCTGATCATCAACCTCTTTGTGGCTGT...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGCTTCAGTAGCTCTGTaGCTGCCACCTCGACTTCCT +
Preference number: 5 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAASVAL*LPPRLP
Trigger: AGGAAGTCGAGGTGGCAGCAACAGAGCTACTGAAGC...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCATAGAGAAGCCAAAGTaGTCGAAGTGGGTGATGCCG +
Preference number: 5 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSIEKPK*SKWVMP
Trigger: CGGCATCACCCACTTCGACAACTTTGGCTTCTCTAT...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACGCCTTCTCTCGCTCTTaGGTGAATTCTCCACTCAGG +
Preference number: 5 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHAFSRS*VNSPLR
Trigger: CCTGAGTGGAGAATTCACCAAAGAGCGAGAGAAGGC...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCAGTACTTGGTGATCTaGAAGAGCCTCAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: LRWFPTTATQSIQLATEGQYLVI*KSLRRR
Trigger: CCGCCTCCTGAGGCTCTTCAAGATCACCAAGTACTG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCGGGAAGTTGTCAAAGTaGCTTCGTCGTACTTCTGTG +
Preference number: 5 (lower is better)
Translates to: ILLLADEEKGRPCPPMASGKLSK*LRRTSV
Trigger: CACAGAAGTACGACGAAGCAACTTTGACAACTTCCC...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAGGGAAGTTGTCAAAGTaGCTTCGTCGTACTTCTGTG +
Preference number: 5 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPGKLSK*LRRTSV
Trigger: CACAGAAGTACGACGAAGCAACTTTGACAACTTCCC...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCTCTCCTCTTCTGACTaGTCTGGGAGCCCTTTCGAC +
Preference number: 5 (lower is better)
Translates to: LRWFPTTATQSIQLATEGLSSSD*SGSPFD
Trigger: GTCGAAAGGGCTCCCAGACAAGTCAGAAGAGGAGAG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTCACAGGACACGGATCTaGTTGGTGGGACTGAAGATG +
Preference number: 5 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAHRTRI*LVGLKM
Trigger: CATCTTCAGTCCCACCAACAAGATCCGTGTCCTGTG...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACCACAGGACACGGATCTaGTTGGTGGGACTGAAGATG +
Preference number: 5 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHHRTRI*LVGLKM
Trigger: CATCTTCAGTCCCACCAACAAGATCCGTGTCCTGTG...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCCGGTGTCCTCCTCATTaGAGTCTATGGCCTTGTACA +
Preference number: 5 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSRCPPH*SLWPCT
Trigger: TGTACAAGGCCATAGACTCAAATGAGGAGGACACCG...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCATGGTGAAAGCCACGTaGAGAATGTCTGAGATGTGG +
Preference number: 5 (lower is better)
Translates to: ILLLADEEKGRPCPPMASMVKAT*RMSEMW
Trigger: CCACATCTCAGACATTCTCAACGTGGCTTTCACCAT...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp AAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGTTCTCTGAGAAAGGGGGTAGAGCCCGGTTCAGCAGCTaGACCAGTCTCATGACCCGG +
Preference number: 5 (lower is better)
Translates to: KMAWYSSARPRFSEKGGRARFSS*TSLMTR
Trigger: CCGGGTCATGAGACTGGTCAAGCTGCTGAACCGGGC...TCTACCCCCTTTCTCAGAGAACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTAAGTTGCCTTCTGTCTaGATCTTGAGGGCTGTGCGC +
Preference number: 5 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAKLPSV*ILRAVR
Trigger: GCGCACAGCCCTCAAGATCAAGACAGAAGGCAACTT...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCTATTGGAGGGATGACTaGGTCCAAGAGCTTCATGCT +
Preference number: 5 (lower is better)
Translates to: ILLLADEEKGRPCPPMASYWRDD*VQELHA
Trigger: AGCATGAAGCTCTTGGACCAAGTCATCCCTCCAATA...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCTCTATTTCAGCAAATaGGAGGGGTCTTTGGTTGGC +
Preference number: 5 (lower is better)
Translates to: ILLLADEEKGRPCPPMASLYFSK*EGSLVG
Trigger: GCCAACCAAAGACCCCTCCAATTTGCTGAAATAGAG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCTGGAAAACACTGGGTaGTTTCTATGGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: ILLLADEEKGRPCPPMASLENTG*FLWLLL
Trigger: CAACAGCAGCCATAGAAACAACCCAGTGTTTTCCAG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS TCA 90 bp GCGTTGTTGGTATTGGCACGAGCAAGAGGGTGGGTGCCTGGGTTCTaGGGGAAGTCCTCCAAGAAGACTGGTGACTCCAGCTCTTCCATC +
Preference number: 5 (lower is better)
Translates to: ALLVLARARGWVPGF*GKSSKKTGDSSSSI
Trigger: GATGGAAGAGCTGGAGTCACCAGTCTTCTTGGAGGACTTCCCTCAGAACCCAGGCACCCACCCTCTTGCTCGTGCCAATACCAACAACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 90 bp GGCTGCTGTTGCCATAGGCAACATTGGCATTGGCGTTGTTGGTATTaGCACGAGCAAGAGGGTGGGTGCCTGGGTTCTGAGGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: GCCCHRQHWHWRCWY*HEQEGGCLGSEGSP
Trigger: AGGACTTCCCTCAGAACCCAGGCACCCACCCTCTTGCTCGTGCCAATACCAACAACGCCAATGCCAATGTTGCCTATGGCAACAGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 90 bp ACCTCGACTTCCTCTGGTTCCATCTGGCAGGCATCTGCCAGGGCCTaGCCTGTTGCCATGACGAAGTTAGCATCTGCTGCTAAGGAGTCT +
Preference number: 5 (lower is better)
Translates to: TSTSSGSIWQASARA*PVAMTKLASAAKES
Trigger: AGACTCCTTAGCAGCAGATGCTAACTTCGTCATGGCAACAGGCCAGGCCCTGGCAGATGCCTGCCAGATGGAACCAGAGGAAGTCGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS CCA 90 bp GCTCCTCAAAGTTCCTGCTGTTGGGTGTTTCCAGAAACCGTGACGTaGGGCCCTTTCCCTCTTTCTGCACAGGATGCTCTGCCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: APQSSCCWVFPETVT*GPFPLSAQDALPGR
Trigger: TCTCCCAGGCAGAGCATCCTGTGCAGAAAGAGGGAAAGGGCCCCACGTCACGGTTTCTGGAAACACCCAACAGCAGGAACTTTGAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CAA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCCGAGGTTCAGAGTGTaGTTGTCATCCTCTGGCATG +
Preference number: 5 (lower is better)
Translates to: LRWFPTTATQSIQLATEGPRFRV*LSSSGM
Trigger: CATGCCAGAGGATGACAACAACACTCTGAACCTCGG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CAA 90 bp ATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGGCCTCCCTCCATGGAGATGCATaGATACACAGTGAGCATAGA +
Preference number: 5 (lower is better)
Translates to: ILLLADEEKGRPCPPMASLHGDA*IHSEHR
Trigger: TCTATGCTCACTGTGTATCAATGCATCTCCATGGAG...GGAGGCCATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTTTTCTCTCGGAGCTTTaGGAAGGTTCCCCTGGACTT +
Preference number: 5 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAFLSEL*EGSPGL
Trigger: AAGTCCAGGGGAACCTTCCAAAAGCTCCGAGAGAAA...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCAAGCAGTCGAAGCGGTaGAAGATGGACATGAAGTAC +
Preference number: 5 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSKQSKR*KMDMKY
Trigger: GTACTTCATGTCCATCTTCAACCGCTTCGACTGCTT...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACAGCGATGTCCAGTACTaGGTGATCTTGAAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHSDVQY*VILKSL
Trigger: GAGGCTCTTCAAGATCACCAAGTACTGGACATCGCT...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACAGGACACGGATCTTGTaGGTGGGACTGAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHRTRIL*VGLKMK
Trigger: CTTCATCTTCAGTCCCACCAACAAGATCCGTGTCCT...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCACAGGACACGGATCTaGTTGGTGGGACTGAAGATG +
Preference number: 5 (lower is better)
Translates to: LRWFPTTATQSIQLATEGHRTRI*LVGLKM
Trigger: CATCTTCAGTCCCACCAACAAGATCCGTGTCCTGTG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACCGGTGTCCTCCTCATTaGAGTCTATGGCCTTGTACA +
Preference number: 5 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHRCPPH*SLWPCT
Trigger: TGTACAAGGCCATAGACTCAAATGAGGAGGACACCG...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTTTGAAAGCTATGAGCTaGAGGACCATCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTALKAMS*RTISRV
Trigger: CACCCTGGAGATGGTCCTCAAGCTCATAGCTTTCAA...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTTGAAAGCTATGAGCTaGAGGACCATCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHLKAMS*RTISRV
Trigger: CACCCTGGAGATGGTCCTCAAGCTCATAGCTTTCAA...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGAAGTTGCCTTCTGTCTaGATCTTGAGGGCTGTGCGC +
Preference number: 5 (lower is better)
Translates to: LRWFPTTATQSIQLATEGKLPSV*ILRAVR
Trigger: GCGCACAGCCCTCAAGATCAAGACAGAAGGCAACTT...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGGTCGTTTGGGAGCCCCAACGCAGATTCAGGCGGCCCAGGGGAGGACCTGAGGTTAGCTTGTTCAAAGTaGCCTTCTGTCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: GSFGSPNADSGGPGEDLRLACSK*PSVLIL
Trigger: CAAGATCAAGACAGAAGGCAACTTTGAACAAGCTAA...CCTCAGGTCCTCCCCTGGGCCGCCTGAATCTGCGTTGGGGCTCCCAAACGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGCTGGAAAACACTGGGTaGTTTCTATGGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: CRILLLADEEKGRPCPPMLENTG*FLWLLL
Trigger: CAACAGCAGCCATAGAAACAACCCAGTGTTTTCCAG...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS TCA 90 bp GGACTTCTGCTCCAGTTTCTTGGTCACCGTGGCCCTCTCCTCTTCTaGCTTGTCTGGGAGCCCTTTCGACATCTTCCTGCGCTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: GLLLQFLGHRGPLLF*LVWEPFRHLPALSL
Trigger: GAGAGAAAGCGCAGGAAGATGTCGAAAGGGCTCCCAGACAAGTCAGAAGAGGAGAGGGCCACGGTGACCAAGAAACTGGAGCAGAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS TCA 90 bp CATCGGTCTTTTCAGTTTGTCCACATGAGATCTGCTGTGAGGTCCTaGGGCCCTGCAGGGCTGACTGAGGGGTCCTTCTCTGGTAACAGG +
Preference number: 5 (lower is better)
Translates to: HRSFQFVHMRSAVRS*GPAGLTEGSFSGNR
Trigger: CCTGTTACCAGAGAAGGACCCCTCAGTCAGCCCTGCAGGGCCTCAGGACCTCACAGCAGATCTCATGTGGACAAACTGAAAAGACCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS TCA 90 bp AACGTGCTCCTCAAAGTTCCTGCTGTTGGGTGTTTCCAGAAACCGTaGCGTGGGGCCCTTTCCCTCTTTCTGCACAGGATGCTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: NVLLKVPAVGCFQKP*RGALSLFLHRMLCL
Trigger: CAGGCAGAGCATCCTGTGCAGAAAGAGGGAAAGGGCCCCACGTCACGGTTTCTGGAAACACCCAACAGCAGGAACTTTGAGGAGCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS GCA 90 bp CATTGGCATTGGCGTTGTTGGTATTGGCACGAGCAAGAGGGTGGGTaGCTGGGTTCTGAGGGAAGTCCTCCAAGAAGACTGGTGACTCCA +
Preference number: 5 (lower is better)
Translates to: HWHWRCWYWHEQEGG*LGSEGSPPRRLVTP
Trigger: TGGAGTCACCAGTCTTCTTGGAGGACTTCCCTCAGAACCCAGGCACCCACCCTCTTGCTCGTGCCAATACCAACAACGCCAATGCCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 90 bp AACACGCGGTTGGCAACATCTTGCAAATGGGTCAACCAGAGTGGCTaGTTGTGGTGCTCCGAGGCAATGGACAGGGTGTTTAGGGCAACG +
Preference number: 5 (lower is better)
Translates to: NTRLATSCKWVNQSG*LWCSEAMDRVFRAT
Trigger: CGTTGCCCTAAACACCCTGTCCATTGCCTCGGAGCACCACAACCAGCCACTCTGGTTGACCCATTTGCAAGATGTTGCCAACCGCGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 90 bp ACTCATCGATTTTCAGCTTGGCGGTGGTGGGGATGCCTTCACCCTTaGACTTCTGCTCCAGTTTCTTGGTCACCGTGGCCCTCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: THRFSAWRWWGCLHP*TSAPVSWSPWPSPL
Trigger: AAGAGGAGAGGGCCACGGTGACCAAGAAACTGGAGCAGAAGTCCAAGGGTGAAGGCATCCCCACCACCGCCAAGCTGAAAATCGATGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACGGGGGCCGTGTTGGTTaGAATGATGTTAACTTGTTC +
Preference number: 5 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHGGRVG*NDVNLF
Trigger: GAACAAGTTAACATCATTCAAACCAACACGGCCCCC...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CAA 90 bp CGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGAAGGTTCCCCTGGACTaGGCCTTCTCTCGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: RWRWTLAKVTGLQLRNRLKVPLD*AFSRSL
Trigger: CAAAGAGCGAGAGAAGGCCAAGTCCAGGGGAACCTT...CAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGTTTCTCTCGGAGCTTTaGGAAGGTTCCCCTGGACTT +
Preference number: 5 (lower is better)
Translates to: LRWFPTTATQSIQLATEGFLSEL*EGSPGL
Trigger: AAGTCCAGGGGAACCTTCCAAAAGCTCCGAGAGAAA...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp AAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGTTCTCTGAGAAAGGGGGTAGATCTGCCTCTGCCAGGTaGTCCACAGCAATAGCCAGG +
Preference number: 5 (lower is better)
Translates to: KMAWYSSARPRFSEKGGRSASAR*STAIAR
Trigger: CCTGGCTATTGCTGTGGACAACCTGGCAGAGGCAGA...TCTACCCCCTTTCTCAGAGAACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp CTGCAAGGCCCAGGTTCTCTGAGAAAGGGGGTAGAGGGAGTTCCAGATGTTCTATTCTGCTCCAGTTTCTaGGTCACCGTGGCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LQGPGSLRKGVEGVPDVLFCSSF*VTVALS
Trigger: GGAGAGGGCCACGGTGACCAAGAAACTGGAGCAGAA...TAGAACATCTGGAACTCCCTCTACCCCCTTTCTCAGAGAACCTGGGCCTTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGAGGACACGGATCTTGTaGGTGGGACTGAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: LRWFPTTATQSIQLATEGRTRIL*VGLKMK
Trigger: CTTCATCTTCAGTCCCACCAACAAGATCCGTGTCCT...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGAAGAGCAGGATGAAGTaGGTGAACCAGGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: LRWFPTTATQSIQLATEGKSRMK*VNQVAL
Trigger: CAATGCCACCTGGTTCACCAACTTCATCCTGCTCTT...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCGGTGTCCTCCTCATTaGAGTCTATGGCCTTGTACA +
Preference number: 5 (lower is better)
Translates to: LRWFPTTATQSIQLATEGRCPPH*SLWPCT
Trigger: TGTACAAGGCCATAGACTCAAATGAGGAGGACACCG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGGGCATACTGTACGCATaGGCGCTGGTTCTTGTCGAG +
Preference number: 5 (lower is better)
Translates to: VGGGLWPKSQGYSFETGWGILYA*ALVLVE
Trigger: CTCGACAAGAACCAGCGCCAATGCGTACAGTATGCC...CCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp TGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGACAGCCACAAAGAGGTaGATGATCAGGAAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: WRWRWTLAKVTGLQLRNRTATKR*MIRKAQ
Trigger: CTGCGCCTTCCTGATCATCAACCTCTTTGTGGCTGT...CCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTCTCTATTTCAGCAAATaGGAGGGGTCTTTGGTTGGC +
Preference number: 5 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTALYFSK*EGSLVG
Trigger: GCCAACCAAAGACCCCTCCAATTTGCTGAAATAGAG...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACCTGGAAAACACTGGGTaGTTTCTATGGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHLENTG*FLWLLL
Trigger: CAACAGCAGCCATAGAAACAACCCAGTGTTTTCCAG...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGGCTTCAGTAGCTCTGTaGCTGCCACCTCGACTTCCT +
Preference number: 5 (lower is better)
Translates to: VGGGLWPKSQGYSFETGWASVAL*LPPRLP
Trigger: AGGAAGTCGAGGTGGCAGCAACAGAGCTACTGAAGC...CCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS CCA 90 bp TTCTATGGCTGCTGTTGCCATAGGCAACATTGGCATTGGCGTTGTTaGTATTGGCACGAGCAAGAGGGTGGGTGCCTGGGTTCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: FYGCCCHRQHWHWRC*YWHEQEGGCLGSEG
Trigger: TCCCTCAGAACCCAGGCACCCACCCTCTTGCTCGTGCCAATACCAACAACGCCAATGCCAATGTTGCCTATGGCAACAGCAGCCATAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp AAGATGGCCTGGTACTCTTCTGCAAGGCCCAGGTTCTCTGAGAAAGGGGGTAGACAGTACTTGGTGATCTaGAAGAGCCTCAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: KMAWYSSARPRFSEKGGRQYLVI*KSLRRR
Trigger: CCGCCTCCTGAGGCTCTTCAAGATCACCAAGTACTG...TCTACCCCCTTTCTCAGAGAACCTGGGCCTTGCAGAAGAGTACCAGGCCATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGATAGCGGAGAGTACATaGTCAAAGTGGAAGTCATTG +
Preference number: 5 (lower is better)
Translates to: CRILLLADEEKGRPCPPMIAEST*SKWKSL
Trigger: CAATGACTTCCACTTTGACAATGTACTCTCCGCTAT...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGATGGTGAAAGCCACGTaGAGAATGTCTGAGATGTGG +
Preference number: 5 (lower is better)
Translates to: LRWFPTTATQSIQLATEGMVKAT*RMSEMW
Trigger: CCACATCTCAGACATTCTCAACGTGGCTTTCACCAT...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTGGCTACTGAGGGGCTCTATTTCAGCAAATaGGAGGGGTCTTTGGTTGGC +
Preference number: 5 (lower is better)
Translates to: LRWFPTTATQSIQLATEGLYFSK*EGSLVG
Trigger: GCCAACCAAAGACCCCTCCAATTTGCTGAAATAGAG...CCCCTCAGTAGCCAGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS GCA 90 bp TTGGCAACATCTTGCAAATGGGTCAACCAGAGTGGCTGGTTGTGGTaGTCCGAGGCAATGGACAGGGTGTTTAGGGCAACGATCAGGATC +
Preference number: 5 (lower is better)
Translates to: LATSCKWVNQSGWLW*SEAMDRVFRATIRI
Trigger: GATCCTGATCGTTGCCCTAAACACCCTGTCCATTGCCTCGGAGCACCACAACCAGCCACTCTGGTTGACCCATTTGCAAGATGTTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCTCTGGTTTCTCTCGGAGCTTTaGGAAGGTTCCCCTGGACTT +
Preference number: 5 (lower is better)
Translates to: GGLWPKSQGYSFETGWLWFLSEL*EGSPGL
Trigger: AAGTCCAGGGGAACCTTCCAAAAGCTCCGAGAGAAA...CCAGAGCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp CCTGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCAATGAACTGGATGATTTaGTTCAAGCCTTCGATTTCA +
Preference number: 5 (lower is better)
Translates to: PAESCFLLMRRRAGPAHPMNWMI*FKPSIS
Trigger: TGAAATCGAAGGCTTGAACAAAATCATCCAGTTCAT...TGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGAAGCAGTCGAAGCGGTaGAAGATGGACATGAAGTAC +
Preference number: 5 (lower is better)
Translates to: WRWRWTLAKVTGLQLRNRKQSKR*KMDMKY
Trigger: GTACTTCATGTCCATCTTCAACCGCTTCGACTGCTT...CCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp GGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCTCTGGAGCGATGTCCAGTACTaGGTGATCTTGAAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: GGLWPKSQGYSFETGWLWSDVQY*VILKSL
Trigger: GAGGCTCTTCAAGATCACCAAGTACTGGACATCGCT...CCAGAGCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp TTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCAAGAGCAGGATGAAGTaGGTGAACCAGGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: LAVDSGQSHRVTASKQVGKSRMK*VNQVAL
Trigger: CAATGCCACCTGGTTCACCAACTTCATCCTGCTCTT...GCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACATAGCGGAGAGTACATaGTCAAAGTGGAAGTCATTG +
Preference number: 5 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHIAEST*SKWKSL
Trigger: CAATGACTTCCACTTTGACAATGTACTCTCCGCTAT...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GCCTCCTGCCTGGTTGAGGTGGTTCCCGACCACCGCTACTCAGTCCATACAGCTATAGCGGAGAGTACATaGTCAAAGTGGAAGTCATTG +
Preference number: 5 (lower is better)
Translates to: ASCLVEVVPDHRYSVHTAIAEST*SKWKSL
Trigger: CAATGACTTCCACTTTGACAATGTACTCTCCGCTAT...AGCTGTATGGACTGAGTAGCGGTGGTCGGGAACCACCTCAACCAGGCAGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCTCTGGTTGAAAGCTATGAGCTaGAGGACCATCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GGLWPKSQGYSFETGWLWLKAMS*RTISRV
Trigger: CACCCTGGAGATGGTCCTCAAGCTCATAGCTTTCAA...CCAGAGCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCTTAGCTTGTTCAAAGTaGCCTTCTGTCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSLACSK*PSVLIL
Trigger: CAAGATCAAGACAGAAGGCAACTTTGAACAAGCTAA...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTATGGAGGGGTCTTTGGTaGGCCATGACAGGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALWRGLW*AMTGGR
Trigger: TCTGCCCCCTGTCATGGCCAACCAAAGACCCCTCCA...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS CCA 90 bp CAAACACGCACTGCACCACGTGCTTCAACCCTTTGGCTCTGTTTATaGCCCGGAGTGGTCTCAGCACTCTCAGAACCCTTAAGATCTTCA +
Preference number: 5 (lower is better)
Translates to: QTRTAPRASTLWLCL*PGVVSALSEPLRSS
Trigger: TGAAGATCTTAAGGGTTCTGAGAGTGCTGAGACCACTCCGGGCCATAAACAGAGCCAAAGGGTTGAAGCACGTGGTGCAGTGCGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 90 bp GGAAGTCATTGTGTATCCACTGGCGGGGACGCAGCTCTATCTGAGTaGGGTCTCCATCCTTGTATATGTAGTAGTAGCCCCTGCATTCCT +
Preference number: 5 (lower is better)
Translates to: GSHCVSTGGDAALSE*GLHPCICSSSPCIP
Trigger: AGGAATGCAGGGGCTACTACTACATATACAAGGATGGAGACCCCACTCAGATAGAGCTGCGTCCCCGCCAGTGGATACACAATGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 90 bp CAGGCATGTCCGCCTCTCCCAAGAACTCCCGTTCATAGCAGATGCTaGAAAACACTGGGTTGTTTCTATGGCTGCTGTTGCCATAGGCAA +
Preference number: 5 (lower is better)
Translates to: QACPPLPRTPVHSRC*KTLGCFYGCCCHRQ
Trigger: TTGCCTATGGCAACAGCAGCCATAGAAACAACCCAGTGTTTTCCAGCATCTGCTATGAACGGGAGTTCTTGGGAGAGGCGGACATGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TGGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGCTCCATGGAGATGCATaGATACACAGTGAGCATAGA +
Preference number: 5 (lower is better)
Translates to: WRWRWTLAKVTGLQLRNRLHGDA*IHSEHR
Trigger: TCTATGCTCACTGTGTATCAATGCATCTCCATGGAG...CCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp TGCCGAATCCTGCTTCTTGCTGATGAGGAGAAGGGCCGGCCCTGCCCACCCATGATGAACTGGATGATTTaGTTCAAGCCTTCGATTTCA +
Preference number: 5 (lower is better)
Translates to: CRILLLADEEKGRPCPPMMNWMI*FKPSIS
Trigger: TGAAATCGAAGGCTTGAACAAAATCATCCAGTTCAT...CATGGGTGGGCAGGGCCGGCCCTTCTCCTCATCAGCAAGAAGCAGGATTCGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTCCAGCATGAACTGGATGATTTaGTTCAAGCCTTCGATTTCA +
Preference number: 5 (lower is better)
Translates to: LRGQGRLLSWANLLLHSSMNWMI*FKPSIS
Trigger: TGAAATCGAAGGCTTGAACAAAATCATCCAGTTCAT...GCTGGAGTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp CGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGGGAAGTTGTCAAAGTaGCTTCGTCGTACTTCTGTG +
Preference number: 5 (lower is better)
Translates to: RWRWTLAKVTGLQLRNRLGKLSK*LRRTSV
Trigger: CACAGAAGTACGACGAAGCAACTTTGACAACTTCCC...CAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp TGGCTCTGGTGTAACCAGGGTGTGGCATTTCTTCTAATGCCATCAGAGGGAAAGCTCAGCCTTGGCCTTTaGGGCAGATGTCAGACTCTC +
Preference number: 5 (lower is better)
Translates to: WLWCNQGVAFLLMPSEGKLSLGL*GRCQTL
Trigger: GAGAGTCTGACATCTGCCCAAAAGGCCAAGGCTGAG...CTTTCCCTCTGATGGCATTAGAAGAAATGCCACACCCTGGTTACACCAGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp CTGCAAGGCCCAGGTTCTCTGAGAAAGGGGGTAGAGGGAGTTCCAGATGTTCTAAGGACACGGATCTTGTaGGTGGGACTGAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: LQGPGSLRKGVEGVPDVLRTRIL*VGLKMK
Trigger: CTTCATCTTCAGTCCCACCAACAAGATCCGTGTCCT...TAGAACATCTGGAACTCCCTCTACCCCCTTTCTCAGAGAACCTGGGCCTTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp GGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCTCTGGATGGTGAAAGCCACGTaGAGAATGTCTGAGATGTGG +
Preference number: 5 (lower is better)
Translates to: GGLWPKSQGYSFETGWLWMVKAT*RMSEMW
Trigger: CCACATCTCAGACATTCTCAACGTGGCTTTCACCAT...CCAGAGCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp TGGCTACTGAGGGGCCAGGGGAGGCTGCTAAGCTGGGCTAACCTACTTCTCCACTTAGCTTGTTCAAAGTaGCCTTCTGTCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: WLLRGQGRLLSWANLLLHLACSK*PSVLIL
Trigger: CAAGATCAAGACAGAAGGCAACTTTGAACAAGCTAA...GTGGAGAAGTAGGTTAGCCCAGCTTAGCAGCCTCCCCTGGCCCCTCAGTAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp TTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGCTATTGGAGGGATGACTaGGTCCAAGAGCTTCATGCT +
Preference number: 5 (lower is better)
Translates to: LAVDSGQSHRVTASKQVGYWRDD*VQELHA
Trigger: AGCATGAAGCTCTTGGACCAAGTCATCCCTCCAATA...GCCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS TCA 90 bp ACATCCAAGCCGGCTCCTTTGCTGCTCATGGGGGCCGTGTTGGTTTaGATGATGTTAACTTGTTCCAGAATCACAGTGAAGACCCCCAGA +
Preference number: 5 (lower is better)
Translates to: TSKPAPLLLMGAVLV*MMLTCSRITVKTPR
Trigger: TCTGGGGGTCTTCACTGTGATTCTGGAACAAGTTAACATCATTCAAACCAACACGGCCCCCATGAGCAGCAAAGGAGCCGGCTTGGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS-3UTR CAA 90 bp TGGCTCTGGTGTAACCAGGGTGTGGCATTTCTTCTAATGCCATCAGAGGGAAAGGCCTTCTCTCGCTCTTaGGTGAATTCTCCACTCAGG +
Preference number: 5 (lower is better)
Translates to: WLWCNQGVAFLLMPSEGKAFSRS*VNSPLR
Trigger: CCTGAGTGGAGAATTCACCAAAGAGCGAGAGAAGGC...CTTTCCCTCTGATGGCATTAGAAGAAATGCCACACCCTGGTTACACCAGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp GGCGTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTATAGCGGAGAGTACATaGTCAAAGTGGAAGTCATTG +
Preference number: 5 (lower is better)
Translates to: GVGGGLWPKSQGYSFETGIAEST*SKWKSL
Trigger: CAATGACTTCCACTTTGACAATGTACTCTCCGCTAT...ACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS CCA 90 bp TTCCAGCGGAAGACGCGATTCCACTGTCGCCAGTGCCGAATGAACTaGATGATTTTGTTCAAGCCTTCGATTTCATACAAGCTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: FQRKTRFHCRQCRMN*MILFKPSISYKLSV
Trigger: CACAGAGAGCTTGTATGAAATCGAAGGCTTGAACAAAATCATCCAGTTCATTCGGCACTGGCGACAGTGGAATCGCGTCTTCCGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS-3UTR CAA 90 bp GTTGGCGGTGGACTCTGGCCAAAGTCACAGGGTTACAGCTTCGAAACAGGTTGGTTAGCTTGTTCAAAGTaGCCTTCTGTCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: VGGGLWPKSQGYSFETGWLACSK*PSVLIL
Trigger: CAAGATCAAGACAGAAGGCAACTTTGAACAAGCTAA...CCAACCTGTTTCGAAGCTGTAACCCTGTGACTTTGGCCAGAGTCCACCGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112064.8
CDS-3UTR CAA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTAGGGGGCCGTGTTGGTTaGAATGATGTTAACTTGTTC +
Preference number: 5 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALGGRVG*NDVNLF
Trigger: GAACAAGTTAACATCATTCAAACCAACACGGCCCCC...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS-3UTR CAA 90 bp GGTGCCAAAGTCAGGCCTGGAGACTTTAATGTCCAGCTAGATAGAGTGGCTTTAAAGCAGTCGAAGCGGTaGAAGATGGACATGAAGTAC +
Preference number: 5 (lower is better)
Translates to: GAKVRPGDFNVQLDRVALKQSKR*KMDMKY
Trigger: GTACTTCATGTCCATCTTCAACCGCTTCGACTGCTT...TAAAGCCACTCTATCTAGCTGGACATTAAAGTCTCCAGGCCTGACTTTGGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
CDS TCA 90 bp GATGATTTTGTTCAAGCCTTCGATTTCATACAAGCTCTCTGTGTCTaGTCCCCCTTCATCCAAAGACAGCTTGCCTTCTCTCAAGTCGTC +
Preference number: 5 (lower is better)
Translates to: DDFVQAFDFIQALCV*SPFIQRQLAFSQVV
Trigger: GACGACTTGAGAGAAGGCAAGCTGTCTTTGGATGAAGGGGGATCAGACACAGAGAGCTTGTATGAAATCGAAGGCTTGAACAAAATCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp CTGCAGCTCGGCCAGAGGGCGTGGTCGGGGGCTCACTaGGATCTCGGGCTCATCTTCCTCATCGTCCCCTGG +
Preference number: 6 (lower is better)
Translates to: LQLGQRAWSGAH*DLGLIFLIVPW
Trigger: CCAGGGGACGATGAGGAAGATGAGCCCGAGATCCCAGTGAGCCCCCGACCACGCCCTCTGGCCGAGCTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS GCA 72 bp AGAGCCTCAGGAGGCGGATACAGCGGAGCACAGAGATaGCCAGGGGCGACATGGCTCCCGACTCCACCAGCA +
Preference number: 6 (lower is better)
Translates to: RASGGGYSGAQR*PGATWLPTPPA
Trigger: TGCTGGTGGAGTCGGGAGCCATGTCGCCCCTGGGCATCTCTGTGCTCCGCTGTATCCGCCTCCTGAGGCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS GCA 72 bp GGCTCCCAGGGCACGGCCCCGCCCTCTGGGGATTCTTaGTTCAGTAGCTCTGTTGCTGCCACCTCGACTTCC +
Preference number: 6 (lower is better)
Translates to: GSQGTAPPSGDS*FSSSVAATSTS
Trigger: GGAAGTCGAGGTGGCAGCAACAGAGCTACTGAAGCAAGAATCCCCAGAGGGCGGGGCCGTGCCCTGGGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS GCA 72 bp CGTGGGGCCCTTTCCCTCTTTCTGCACAGGATGCTCTaGCTGGGAGAGCTGGCACGGGGAAGGAGGCACCTG +
Preference number: 6 (lower is better)
Translates to: RGALSLFLHRML*LGELARGRRHL
Trigger: CAGGTGCCTCCTTCCCCGTGCCAGCTCTCCCAGGCAGAGCATCCTGTGCAGAAAGAGGGAAAGGGCCCCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS GCA 72 bp CGTGACGTGGGGCCCTTTCCCTCTTTCTGCACAGGATaGTCTGCCTGGGAGAGCTGGCACGGGGAAGGAGGC +
Preference number: 6 (lower is better)
Translates to: RDVGPFPSFCTG*SAWESWHGEGG
Trigger: GCCTCCTTCCCCGTGCCAGCTCTCCCAGGCAGAGCATCCTGTGCAGAAAGAGGGAAAGGGCCCCACGTCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS CAA 90 bp ATGCCGTGGTTGGGTCCTGGCCAACCTCCTCGGCACTCGCTGCCATaGATGGTGCAGGGACGCCCAGAGCCAGTTCTAGCACAGGGTGAT +
Preference number: 6 (lower is better)
Translates to: MPWLGPGQPPRHSLP*MVQGRPEPVLAQGD
Trigger: ATCACCCTGTGCTAGAACTGGCTCTGGGCGTCCCTGCACCATCAATGGCAGCGAGTGCCGAGGAGGTTGGCCAGGACCCAACCACGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS GCA 72 bp TCCAGAAACCGTGACGTGGGGCCCTTTCCCTCTTTCTaGACAGGATGCTCTGCCTGGGAGAGCTGGCACGGG +
Preference number: 6 (lower is better)
Translates to: SRNRDVGPFPSF*TGCSAWESWHG
Trigger: CCCGTGCCAGCTCTCCCAGGCAGAGCATCCTGTGCAGAAAGAGGGAAAGGGCCCCACGTCACGGTTTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS CCA 72 bp TGCTTTCTCTTTCAGCTGCAGCTCGGCCAGAGGGCGTaGTCGGGGGCTCACTGGGATCTCGGGCTCATCTTC +
Preference number: 6 (lower is better)
Translates to: CFLFQLQLGQRA*SGAHWDLGLIF
Trigger: GAAGATGAGCCCGAGATCCCAGTGAGCCCCCGACCACGCCCTCTGGCCGAGCTGCAGCTGAAAGAGAAAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CAA 90 bp AGGGCACGGCCCCGCCCTCTGGGGATTCTTGCTTCAGTAGCTCTGTaGCTGCCACCTCGACTTCCTCTGGTTCCATCTGGCAGGCATCTG +
Preference number: 6 (lower is better)
Translates to: RARPRPLGILASVAL*LPPRLPLVPSGRHL
Trigger: CAGATGCCTGCCAGATGGAACCAGAGGAAGTCGAGGTGGCAGCAACAGAGCTACTGAAGCAAGAATCCCCAGAGGGCGGGGCCGTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS GCA 72 bp CGTAGTCAGACTCCGGGTCACACAGCTTCCCATAGCTaGAGGCCAGCAGGATCTCTTGCCAGGCTTCCCCTG +
Preference number: 6 (lower is better)
Translates to: RSQTPGHTASHS*RPAGSLARLPL
Trigger: CAGGGGAAGCCTGGCAAGAGATCCTGCTGGCCTGCAGCTATGGGAAGCTGTGTGACCCGGAGTCTGACTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS TCA 72 bp GCAGCAGCAAGAGGGAAGCAATGGAGCGGATGGAGTTaGGCAGTGAGGCCACCAGGTTGCTCAGCGATGTCC +
Preference number: 6 (lower is better)
Translates to: AAARGKQWSGWS*AVRPPGCSAMS
Trigger: GGACATCGCTGAGCAACCTGGTGGCCTCACTGCTCAACTCCATCCGCTCCATTGCTTCCCTCTTGCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS GCA 72 bp TTGGCGGTGGTGGGGATGCCTTCACCCTTGGACTTCTaGTCCAGTTTCTTGGTCACCGTGGCCCTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: LAVVGMPSPLDF*SSFLVTVALSS
Trigger: AGAGGAGAGGGCCACGGTGACCAAGAAACTGGAGCAGAAGTCCAAGGGTGAAGGCATCCCCACCACCGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp CACTGGGATCTCGGGCTCATCTTCCTCATCGTCCCCTaGGAAGTCAGCCGAAGGGTAGGGGTCTTTCACCTC +
Preference number: 6 (lower is better)
Translates to: HWDLGLIFLIVP*EVSRRVGVFHL
Trigger: GAGGTGAAAGACCCCTACCCTTCGGCTGACTTCCCAGGGGACGATGAGGAAGATGAGCCCGAGATCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS TCA 72 bp GTATTGGCACGAGCAAGAGGGTGGGTGCCTGGGTTCTaGGGGAAGTCCTCCAAGAAGACTGGTGACTCCAGC +
Preference number: 6 (lower is better)
Translates to: VLARARGWVPGF*GKSSKKTGDSS
Trigger: GCTGGAGTCACCAGTCTTCTTGGAGGACTTCCCTCAGAACCCAGGCACCCACCCTCTTGCTCGTGCCAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp CTCCAGGCCGAGGTTCAGAGTGTTGTTGTCATCCTCTaGCATGGGCAGGTACACTGCCAGGGCCACACAGTT +
Preference number: 6 (lower is better)
Translates to: LQAEVQSVVVIL*HGQVHCQGHTV
Trigger: AACTGTGTGGCCCTGGCAGTGTACCTGCCCATGCCAGAGGATGACAACAACACTCTGAACCTCGGCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS CCA 72 bp TCCTCTGGTTCCATCTGGCAGGCATCTGCCAGGGCCTaGCCTGTTGCCATGACGAAGTTAGCATCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SSGSIWQASARA*PVAMTKLASAA
Trigger: AGCAGCAGATGCTAACTTCGTCATGGCAACAGGCCAGGCCCTGGCAGATGCCTGCCAGATGGAACCAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS TCA 72 bp CTCCAGTTTCTTGGTCACCGTGGCCCTCTCCTCTTCTaGCTTGTCTGGGAGCCCTTTCGACATCTTCCTGCG +
Preference number: 6 (lower is better)
Translates to: LQFLGHRGPLLF*LVWEPFRHLPA
Trigger: CGCAGGAAGATGTCGAAAGGGCTCCCAGACAAGTCAGAAGAGGAGAGGGCCACGGTGACCAAGAAACTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS GCA 72 bp GAGCCGAATTCCTGGGAACGTGCTCCTCAAAGTTCCTaGTGTTGGGTGTTTCCAGAAACCGTGACGTGGGGC +
Preference number: 6 (lower is better)
Translates to: EPNSWERAPQSS*CWVFPETVTWG
Trigger: GCCCCACGTCACGGTTTCTGGAAACACCCAACAGCAGGAACTTTGAGGAGCACGTTCCCAGGAATTCGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS CCA 72 bp GCGGTTGGCAACATCTTGCAAATGGGTCAACCAGAGTaGCTGGTTGTGGTGCTCCGAGGCAATGGACAGGGT +
Preference number: 6 (lower is better)
Translates to: AVGNILQMGQPE*LVVVLRGNGQG
Trigger: ACCCTGTCCATTGCCTCGGAGCACCACAACCAGCCACTCTGGTTGACCCATTTGCAAGATGTTGCCAACCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp AGGGTCAGCAACACGCGGTTGGCAACATCTTGCAAATaGGTCAACCAGAGTGGCTGGTTGTGGTGCTCCGAG +
Preference number: 6 (lower is better)
Translates to: RVSNTRLATSCK*VNQSGWLWCSE
Trigger: CTCGGAGCACCACAACCAGCCACTCTGGTTGACCCATTTGCAAGATGTTGCCAACCGCGTGTTGCTGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CAA 90 bp ACGCGGTTGGCAACATCTTGCAAATGGGTCAACCAGAGTGGCTGGTaGTGGTGCTCCGAGGCAATGGACAGGGTGTTTAGGGCAACGATC +
Preference number: 6 (lower is better)
Translates to: TRLATSCKWVNQSGW*WCSEAMDRVFRATI
Trigger: GATCGTTGCCCTAAACACCCTGTCCATTGCCTCGGAGCACCACAACCAGCCACTCTGGTTGACCCATTTGCAAGATGTTGCCAACCGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS TCA 72 bp TTTCAGTTTGTCCACATGAGATCTGCTGTGAGGTCCTaGGGCCCTGCAGGGCTGACTGAGGGGTCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: FQFVHMRSAVRS*GPAGLTEGSFS
Trigger: AGAGAAGGACCCCTCAGTCAGCCCTGCAGGGCCTCAGGACCTCACAGCAGATCTCATGTGGACAAACTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS GCA 72 bp TCTTGCAAATGGGTCAACCAGAGTGGCTGGTTGTGGTaGTCCGAGGCAATGGACAGGGTGTTTAGGGCAACG +
Preference number: 6 (lower is better)
Translates to: SCKWVNQSGWLW*SEAMDRVFRAT
Trigger: CGTTGCCCTAAACACCCTGTCCATTGCCTCGGAGCACCACAACCAGCCACTCTGGTTGACCCATTTGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp TCAACCAGAGTGGCTGGTTGTGGTGCTCCGAGGCAATaGACAGGGTGTTTAGGGCAACGATCAGGATCACCA +
Preference number: 6 (lower is better)
Translates to: STRVAGCGAPRQ*TGCLGQRSGSP
Trigger: TGGTGATCCTGATCGTTGCCCTAAACACCCTGTCCATTGCCTCGGAGCACCACAACCAGCCACTCTGGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp CAACAAACACGCACTGCACCACGTGCTTCAACCCTTTaGCTCTGTTTATGGCCCGGAGTGGTCTCAGCACTC +
Preference number: 6 (lower is better)
Translates to: QQTRTAPRASTL*LCLWPGVVSAL
Trigger: GAGTGCTGAGACCACTCCGGGCCATAAACAGAGCCAAAGGGTTGAAGCACGTGGTGCAGTGCGTGTTTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp TGTAGACAGGGCCGGTGTCCTCCTCATTTGAGTCTATaGCCTTGTACAGTAGCTGAGGCCAACCCTCGAAGG +
Preference number: 6 (lower is better)
Translates to: CRQGRCPPHLSL*PCTVAEANPRR
Trigger: CCTTCGAGGGTTGGCCTCAGCTACTGTACAAGGCCATAGACTCAAATGAGGAGGACACCGGCCCTGTCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp TGCCATAGGCAACATTGGCATTGGCGTTGTTGGTATTaGCACGAGCAAGAGGGTGGGTGCCTGGGTTCTGAG +
Preference number: 6 (lower is better)
Translates to: CHRQHWHWRCWY*HEQEGGCLGSE
Trigger: CTCAGAACCCAGGCACCCACCCTCTTGCTCGTGCCAATACCAACAACGCCAATGCCAATGTTGCCTATGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp TGCTGTTGCCATAGGCAACATTGGCATTGGCGTTGTTaGTATTGGCACGAGCAAGAGGGTGGGTGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: CCCHRQHWHWRC*YWHEQEGGCLG
Trigger: ACCCAGGCACCCACCCTCTTGCTCGTGCCAATACCAACAACGCCAATGCCAATGTTGCCTATGGCAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp AGTTCCTGCTGTTGGGTGTTTCCAGAAACCGTGACGTaGGGCCCTTTCCCTCTTTCTGCACAGGATGCTCTG +
Preference number: 6 (lower is better)
Translates to: SSCCWVFPETVT*GPFPLSAQDAL
Trigger: CAGAGCATCCTGTGCAGAAAGAGGGAAAGGGCCCCACGTCACGGTTTCTGGAAACACCCAACAGCAGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS CCA 72 bp GCGGAAGAAGGCACTGGAGATACGGGCGCTCTCATCTaGGTCATCGATCTCGCTCAGGATGACGTCAATGAT +
Preference number: 6 (lower is better)
Translates to: AEEGTGDTGALI*VIDLAQDDVND
Trigger: ATCATTGACGTCATCCTGAGCGAGATCGATGACCCAGATGAGAGCGCCCGTATCTCCAGTGCCTTCTTCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112068.10
ENSMUST00000161865.2
CDS CAA 72 bp TACTCCAGTTTCTCCAGGCCGAGGTTCAGAGTGTTGTaGTCATCCTCTGGCATGGGCAGGTACACTGCCAGG +
Preference number: 6 (lower is better)
Translates to: YSSFSRPRFRVL*SSSGMGRYTAR
Trigger: CCTGGCAGTGTACCTGCCCATGCCAGAGGATGACAACAACACTCTGAACCTCGGCCTGGAGAAACTGGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS CAA 72 bp ACCAGGTTGCTCAGCGATGTCCAGTACTTGGTGATCTaGAAGAGCCTCAGGAGGCGGATACAGCGGAGCACA +
Preference number: 6 (lower is better)
Translates to: TRLLSDVQYLVI*KSLRRRIQRST
Trigger: TGTGCTCCGCTGTATCCGCCTCCTGAGGCTCTTCAAGATCACCAAGTACTGGACATCGCTGAGCAACCTGGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CAA 72 bp GCAACAAACACGCACTGCACCACGTGCTTCAACCCTTaGGCTCTGTTTATGGCCCGGAGTGGTCTCAGCACT +
Preference number: 6 (lower is better)
Translates to: ATNTHCTTCFNP*ALFMARSGLST
Trigger: AGTGCTGAGACCACTCCGGGCCATAAACAGAGCCAAAGGGTTGAAGCACGTGGTGCAGTGCGTGTTTGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS TCA 72 bp GGTGCAGGGACGCCCAGAGCCAGTTCTAGCACAGGGTaGTGGTTTCTCATTCTCAACTGTGGCTACAATGTC +
Preference number: 6 (lower is better)
Translates to: GAGTPRASSSTG*WFLILNCGYNV
Trigger: GACATTGTAGCCACAGTTGAGAATGAGAAACCATCACCCTGTGCTAGAACTGGCTCTGGGCGTCCCTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS TCA 72 bp CTCAAAGTTCCTGCTGTTGGGTGTTTCCAGAAACCGTaGCGTGGGGCCCTTTCCCTCTTTCTGCACAGGATG +
Preference number: 6 (lower is better)
Translates to: LKVPAVGCFQKP*RGALSLFLHRM
Trigger: CATCCTGTGCAGAAAGAGGGAAAGGGCCCCACGTCACGGTTTCTGGAAACACCCAACAGCAGGAACTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS CCA 72 bp ACTGCACCACGTGCTTCAACCCTTTGGCTCTGTTTATaGCCCGGAGTGGTCTCAGCACTCTCAGAACCCTTA +
Preference number: 6 (lower is better)
Translates to: TAPRASTLWLCL*PGVVSALSEPL
Trigger: TAAGGGTTCTGAGAGTGCTGAGACCACTCCGGGCCATAAACAGAGCCAAAGGGTTGAAGCACGTGGTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp TGTGTATCCACTGGCGGGGACGCAGCTCTATCTGAGTaGGGTCTCCATCCTTGTATATGTAGTAGTAGCCCC +
Preference number: 6 (lower is better)
Translates to: CVSTGGDAALSE*GLHPCICSSSP
Trigger: GGGGCTACTACTACATATACAAGGATGGAGACCCCACTCAGATAGAGCTGCGTCCCCGCCAGTGGATACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp TGGCACGGTGGATCTCAGGAGCTGCCTCTTCCTCTATaGTCCGTAATCCAGCCTGTATCTGAACTGTGTCCT +
Preference number: 6 (lower is better)
Translates to: WHGGSQELPLPL*SVIQPVSELCP
Trigger: AGGACACAGTTCAGATACAGGCTGGATTACGGACCATAGAGGAAGAGGCAGCTCCTGAGATCCACCGTGCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CAA 72 bp AAGTACTCCAGTTTCTCCAGGCCGAGGTTCAGAGTGTaGTTGTCATCCTCTGGCATGGGCAGGTACACTGCC +
Preference number: 6 (lower is better)
Translates to: KYSSFSRPRFRV*LSSSGMGRYTA
Trigger: GGCAGTGTACCTGCCCATGCCAGAGGATGACAACAACACTCTGAACCTCGGCCTGGAGAAACTGGAGTACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS CAA 72 bp GCAACATCTTGCAAATGGGTCAACCAGAGTGGCTGGTaGTGGTGCTCCGAGGCAATGGACAGGGTGTTTAGG +
Preference number: 6 (lower is better)
Translates to: ATSCKWVNQSGW*WCSEAMDRVFR
Trigger: CCTAAACACCCTGTCCATTGCCTCGGAGCACCACAACCAGCCACTCTGGTTGACCCATTTGCAAGATGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CAA 72 bp CTCGGTTGTTGTAGACAGGGCCGGTGTCCTCCTCATTaGAGTCTATGGCCTTGTACAGTAGCTGAGGCCAAC +
Preference number: 6 (lower is better)
Translates to: LGCCRQGRCPPH*SLWPCTVAEAN
Trigger: GTTGGCCTCAGCTACTGTACAAGGCCATAGACTCAAATGAGGAGGACACCGGCCCTGTCTACAACAACCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS GCA 72 bp CAAACTCATCGATTTTCAGCTTGGCGGTGGTGGGGATaGCTTCACCCTTGGACTTCTGCTCCAGTTTCTTGG +
Preference number: 6 (lower is better)
Translates to: QTHRFSAWRWWG*LHPWTSAPVSW
Trigger: CCAAGAAACTGGAGCAGAAGTCCAAGGGTGAAGGCATCCCCACCACCGCCAAGCTGAAAATCGATGAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp TTGGCAACATCTTGCAAATGGGTCAACCAGAGTGGCTaGTTGTGGTGCTCCGAGGCAATGGACAGGGTGTTT +
Preference number: 6 (lower is better)
Translates to: LATSCKWVNQSG*LWCSEAMDRVF
Trigger: AAACACCCTGTCCATTGCCTCGGAGCACCACAACCAGCCACTCTGGTTGACCCATTTGCAAGATGTTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp TTCTATGGCTGCTGTTGCCATAGGCAACATTGGCATTaGCGTTGTTGGTATTGGCACGAGCAAGAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: FYGCCCHRQHWH*RCWYWHEQEGG
Trigger: CCCACCCTCTTGCTCGTGCCAATACCAACAACGCCAATGCCAATGTTGCCTATGGCAACAGCAGCCATAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp CCGCCTCTCCCAAGAACTCCCGTTCATAGCAGATGCTaGAAAACACTGGGTTGTTTCTATGGCTGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: PPLPRTPVHSRC*KTLGCFYGCCC
Trigger: GCAACAGCAGCCATAGAAACAACCCAGTGTTTTCCAGCATCTGCTATGAACGGGAGTTCTTGGGAGAGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CAA 72 bp AGCATTTCGATGGTGAAGAGGGTCAGCAACACGCGGTaGGCAACATCTTGCAAATGGGTCAACCAGAGTGGC +
Preference number: 6 (lower is better)
Translates to: SISMVKRVSNTR*ATSCKWVNQSG
Trigger: GCCACTCTGGTTGACCCATTTGCAAGATGTTGCCAACCGCGTGTTGCTGACCCTCTTCACCATCGAAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CAA 90 bp CACATCCAAGCCGGCTCCTTTGCTGCTCATGGGGGCCGTGTTGGTTaGAATGATGTTAACTTGTTCCAGAATCACAGTGAAGACCCCCAG +
Preference number: 6 (lower is better)
Translates to: HIQAGSFAAHGGRVG*NDVNLFQNHSEDPQ
Trigger: CTGGGGGTCTTCACTGTGATTCTGGAACAAGTTAACATCATTCAAACCAACACGGCCCCCATGAGCAGCAAAGGAGCCGGCTTGGATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS GCA 72 bp TGTCCGCCTCTCCCAAGAACTCCCGTTCATAGCAGATaGTGGAAAACACTGGGTTGTTTCTATGGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: CPPLPRTPVHSR*WKTLGCFYGCC
Trigger: ACAGCAGCCATAGAAACAACCCAGTGTTTTCCAGCATCTGCTATGAACGGGAGTTCTTGGGAGAGGCGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS TCA 72 bp CCGGCTCCTTTGCTGCTCATGGGGGCCGTGTTGGTTTaGATGATGTTAACTTGTTCCAGAATCACAGTGAAG +
Preference number: 6 (lower is better)
Translates to: PAPLLLMGAVLV*MMLTCSRITVK
Trigger: CTTCACTGTGATTCTGGAACAAGTTAACATCATTCAAACCAACACGGCCCCCATGAGCAGCAAAGGAGCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS CCA 72 bp AAGAGTGACATCATAGCGGAGAGTACATTGTCAAAGTaGAAGTCATTGTGTATCCACTGGCGGGGACGCAGC +
Preference number: 6 (lower is better)
Translates to: KSDIIAESTLSK*KSLCIHWRGRS
Trigger: GCTGCGTCCCCGCCAGTGGATACACAATGACTTCCACTTTGACAATGTACTCTCCGCTATGATGTCACTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CCA 72 bp TCTTCCATCTCTATTTCAGCAAATTGGAGGGGTCTTTaGTTGGCCATGACAGGGGGCAGAGAGTTGGTCCTT +
Preference number: 6 (lower is better)
Translates to: SSISISANWRGL*LAMTGGRELVL
Trigger: AAGGACCAACTCTCTGCCCCCTGTCATGGCCAACCAAAGACCCCTCCAATTTGCTGAAATAGAGATGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CAA 72 bp GCCGGCTCCTTTGCTGCTCATGGGGGCCGTGTTGGTTaGAATGATGTTAACTTGTTCCAGAATCACAGTGAA +
Preference number: 6 (lower is better)
Translates to: AGSFAAHGGRVG*NDVNLFQNHSE
Trigger: TTCACTGTGATTCTGGAACAAGTTAACATCATTCAAACCAACACGGCCCCCATGAGCAGCAAAGGAGCCGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS CCA 72 bp CAAGAACTCCCGTTCATAGCAGATGCTGGAAAACACTaGGTTGTTTCTATGGCTGCTGTTGCCATAGGCAAC +
Preference number: 6 (lower is better)
Translates to: QELPFIADAGKH*VVSMAAVAIGN
Trigger: GTTGCCTATGGCAACAGCAGCCATAGAAACAACCCAGTGTTTTCCAGCATCTGCTATGAACGGGAGTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CAA 72 bp GCTCATGGGGGCCGTGTTGGTTTGAATGATGTTAACTaGTTCCAGAATCACAGTGAAGACCCCCAGAAAGAC +
Preference number: 6 (lower is better)
Translates to: AHGGRVGLNDVN*FQNHSEDPQKD
Trigger: GTCTTTCTGGGGGTCTTCACTGTGATTCTGGAACAAGTTAACATCATTCAAACCAACACGGCCCCCATGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS CAA 72 bp GTACAGGACATCAGTCCACCCCTCCATGGAGATGCATaGATACACAGTGAGCATAGAGAAGCCAAAGTTGTC +
Preference number: 6 (lower is better)
Translates to: VQDISPPLHGDA*IHSEHREAKVV
Trigger: GACAACTTTGGCTTCTCTATGCTCACTGTGTATCAATGCATCTCCATGGAGGGGTGGACTGATGTCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CAA 72 bp GAGACCGTGAAGAGTGACATCATAGCGGAGAGTACATaGTCAAAGTGGAAGTCATTGTGTATCCACTGGCGG +
Preference number: 6 (lower is better)
Translates to: ETVKSDIIAEST*SKWKSLCIHWR
Trigger: CCGCCAGTGGATACACAATGACTTCCACTTTGACAATGTACTCTCCGCTATGATGTCACTCTTCACGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CAA 90 bp AAGACGCGATTCCACTGTCGCCAGTGCCGAATGAACTGGATGATTTaGTTCAAGCCTTCGATTTCATACAAGCTCTCTGTGTCTGATCCC +
Preference number: 6 (lower is better)
Translates to: KTRFHCRQCRMNWMI*FKPSISYKLSVSDP
Trigger: GGGATCAGACACAGAGAGCTTGTATGAAATCGAAGGCTTGAACAAAATCATCCAGTTCATTCGGCACTGGCGACAGTGGAATCGCGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS TCA 72 bp GTTCAAGCCTTCGATTTCATACAAGCTCTCTGTGTCTaGTCCCCCTTCATCCAAAGACAGCTTGCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: VQAFDFIQALCV*SPFIQRQLAFS
Trigger: AGAGAAGGCAAGCTGTCTTTGGATGAAGGGGGATCAGACACAGAGAGCTTGTATGAAATCGAAGGCTTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS TCA 72 bp AGCCGAAGGGTAGGGGTCTTTCACCTCATTAACGTTTaGTTCAAACTCATCGATTTTCAGCTTGGCGGTGGT +
Preference number: 6 (lower is better)
Translates to: SRRVGVFHLINV*FKLIDFQLGGG
Trigger: ACCACCGCCAAGCTGAAAATCGATGAGTTTGAATCAAACGTTAATGAGGTGAAAGACCCCTACCCTTCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CAA 90 bp TCCTTTGCTGCTCATGGGGGCCGTGTTGGTTTGAATGATGTTAACTaGTTCCAGAATCACAGTGAAGACCCCCAGAAAGACAATGATGAA +
Preference number: 6 (lower is better)
Translates to: SFAAHGGRVGLNDVN*FQNHSEDPQKDNDE
Trigger: TTCATCATTGTCTTTCTGGGGGTCTTCACTGTGATTCTGGAACAAGTTAACATCATTCAAACCAACACGGCCCCCATGAGCAGCAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
CDS TCA 72 bp GGTGAAGATGATGGTGAAAGCCACGTTGAGAATGTCTaGGATGTGGTTCATCTGTTCCGACTGGTTGTAATG +
Preference number: 6 (lower is better)
Translates to: GEDDGESHVENV*DVVHLFRLVVM
Trigger: CATTACAACCAGTCGGAACAGATGAACCACATCTCAGACATTCTCAACGTGGCTTTCACCATCATCTTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS GCA 72 bp TGGGGTCTCCATCCTTGTATATGTAGTAGTAGCCCCTaGATTCCTCTTCAGTCATCTTGGATAAGTCATTGC +
Preference number: 6 (lower is better)
Translates to: WGLHPCICSSSP*IPLQSSWISHC
Trigger: GCAATGACTTATCCAAGATGACTGAAGAGGAATGCAGGGGCTACTACTACATATACAAGGATGGAGACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2
CDS CAA 72 bp TTCCACTGTCGCCAGTGCCGAATGAACTGGATGATTTaGTTCAAGCCTTCGATTTCATACAAGCTCTCTGTG +
Preference number: 6 (lower is better)
Translates to: FHCRQCRMNWMI*FKPSISYKLSV
Trigger: CACAGAGAGCTTGTATGAAATCGAAGGCTTGAACAAAATCATCCAGTTCATTCGGCACTGGCGACAGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112064.8
ENSMUST00000112068.10
ENSMUST00000160641.8
ENSMUST00000161865.2