RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNA1G (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020866

Ensembl transcript IDs: ENSMUST00000021234.15, ENSMUST00000100561.10, ENSMUST00000103166.9, ENSMUST00000107785.2, ENSMUST00000107786.8, ENSMUST00000107788.8, ENSMUST00000107789.8, ENSMUST00000107790.8, ENSMUST00000107791.8, ENSMUST00000107792.8, ENSMUST00000107793.8

Found 1815 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTTTCCAAAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTaGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAA +
Preference number: 1 (lower is better)
Translates to: SFQNGSRFPLKMGRR*VVIHSRPPACALQE
Trigger: TTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTTTGGAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGGCGGAGCTAGGATCTaGACCCAGTGGAGAAAGGTG +
Preference number: 2 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCGGARI*TQWRKV
Trigger: CACCTTTCTCCACTGGGTGCAGATCCTAGCTCCGCC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGAGCCTTGGCCACACTaGGCATCTCCTTCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCEPWPH*ASPSPS
Trigger: AGAAGGAGAAGGAGATGCCCAGTGTGGCCAAGGCTC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTCTCCCAACAGCTCCTaGTGTCGAGAGCCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: LKMGRRWVVIHSRPPACASPNSS*CREPWP
Trigger: TGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGA...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGGCGGAGCTAGGATCTaGACCCAGTGGAGAAAGGTG +
Preference number: 2 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAGGARI*TQWRKV
Trigger: CACCTTTCTCCACTGGGTGCAGATCCTAGCTCCGCC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGTGGTGTCGAGAGCCTTaGCCACACTGGGCATCTCCT +
Preference number: 2 (lower is better)
Translates to: RWVVIHSRPPACALQEEGWCREP*PHWASP
Trigger: AGGAGATGCCCAGTGTGGCCAAGGCTCTCGACACCA...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCTCTCCCAACAGCTCCTaGTGTCGAGAGCCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTASPNSS*CREPWP
Trigger: TGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGA...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGGCGGAGCTAGGATCTaGACCCAGTGGAGAAAGGTG +
Preference number: 2 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSGGARI*TQWRKV
Trigger: CACCTTTCTCCACTGGGTGCAGATCCTAGCTCCGCC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTTCTCCCAACAGCTCCTaGTGTCGAGAGCCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVSPNSS*CREPWP
Trigger: TGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGA...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR TCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGTGTTCTCTTCAGACTaGCTCTCAGGAAGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAVFSSD*LSGSPA
Trigger: AGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACAC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCTTACGCCCCTTTGCTaGTTACATGGGACTTTTCAG +
Preference number: 2 (lower is better)
Translates to: LKMGRRWVVIHSRPPACALTPLC*LHGTFQ
Trigger: CTGAAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGACTCTCAGGAAGTCCTaGTTGTCATCCCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: RWVVIHSRPPACALQEEGTLRKS*LSSLSH
Trigger: GTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAGT...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGACTCTCAGGAAGTCCTaGTTGTCATCCCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: HSRPPACALQEEGIELDWTLRKS*LSSLSH
Trigger: GTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAGT...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTCTCAGGAAGTCCTaGTTGTCATCCCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHTLRKS*LSSLSH
Trigger: GTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAGT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATTGGTGTCGAGAGCCTTaGCCACACTGGGCATCTCCT +
Preference number: 2 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDWCREP*PHWASP
Trigger: AGGAGATGCCCAGTGTGGCCAAGGCTCTCGACACCA...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATCTCCCAACAGCTCCTaGTGTCGAGAGCCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: SRPPACALQEEGIELDWLSPNSS*CREPWP
Trigger: TGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGA...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR TCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGTGTTCTCTTCAGACTaGCTCTCAGGAAGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAVFSSD*LSGSPA
Trigger: AGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACAC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGGCGGAGCTAGGATCTaGACCCAGTGGAGAAAGGTG +
Preference number: 2 (lower is better)
Translates to: RPPACALQEEGIELDWLFGGARI*TQWRKV
Trigger: CACCTTTCTCCACTGGGTGCAGATCCTAGCTCCGCC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCTACTTACGCCCCTTTaGTGCTTACATGGGACTTTT +
Preference number: 2 (lower is better)
Translates to: LKMGRRWVVIHSRPPACALLTPL*CLHGTF
Trigger: AAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAGTAG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACACTCTCAGGAAGTCCTaGTTGTCATCCCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHTLRKS*LSSLSH
Trigger: GTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAGT...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACTCTCAGGAAGTCCTaGTTGTCATCCCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVTLRKS*LSSLSH
Trigger: GTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAGT...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACAGGATCTGCACCCAGTaGAGAAAGGTGATGGGGACA +
Preference number: 2 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHRICTQ*RKVMGT
Trigger: TGTCCCCATCACCTTTCTCCACTGGGTGCAGATCCT...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCCTTTGCTGCTTACATaGGACTTTTCAGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAPLLLT*DFSEGL
Trigger: CAGTCCTTCTGAAAAGTCCCATGTAAGCAGCAAAGG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR CAA 90 bp CAGTTTCCAAAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTaGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGA +
Preference number: 2 (lower is better)
Translates to: QFPKWFSLSVEDGPP*GCNTLTAPGLCFTR
Trigger: TCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTTTGGAAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR TCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGTGTTCTCTTCAGACTaGCTCTCAGGAAGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVVFSSD*LSGSPA
Trigger: AGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACAC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR TCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGTGTTCTCTTCAGACTaGCTCTCAGGAAGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHVFSSD*LSGSPA
Trigger: AGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACAC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCTTACGCCCCTTTGCTaGTTACATGGGACTTTTCAG +
Preference number: 2 (lower is better)
Translates to: LSGSPACHPSATEEGMRGLTPLC*LHGTFQ
Trigger: CTGAAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCTTACGCCCCTTTGCTaGTTACATGGGACTTTTCAG +
Preference number: 2 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHLTPLC*LHGTFQ
Trigger: CTGAAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCTTACGCCCCTTTGCTaGTTACATGGGACTTTTCAG +
Preference number: 2 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTALTPLC*LHGTFQ
Trigger: CTGAAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCCTTACGCCCCTTTGCTaGTTACATGGGACTTTTCAG +
Preference number: 2 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSLTPLC*LHGTFQ
Trigger: CTGAAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAG...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCTACTTACGCCCCTTTaGTGCTTACATGGGACTTTT +
Preference number: 2 (lower is better)
Translates to: LSGSPACHPSATEEGMRGLLTPL*CLHGTF
Trigger: AAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAGTAG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCTACTTACGCCCCTTTaGTGCTTACATGGGACTTTT +
Preference number: 2 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTALLTPL*CLHGTF
Trigger: AAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAGTAG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTACTCTCAGGAAGTCCTaGTTGTCATCCCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: RPPACALQEEGIELDWLFTLRKS*LSSLSH
Trigger: GTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAGT...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCACTCTCAGGAAGTCCTaGTTGTCATCCCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESTLRKS*LSSLSH
Trigger: GTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAGT...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCTCTGCACAAACGTATTaGTTTCTCCCAACAGCTCCT +
Preference number: 2 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTASAQTY*FLPTAP
Trigger: AGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGA...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCAGGATCTGCACCCAGTaGAGAAAGGTGATGGGGACA +
Preference number: 2 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESRICTQ*RKVMGT
Trigger: TGTCCCCATCACCTTTCTCCACTGGGTGCAGATCCT...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGCCTTTGCTGCTTACATaGGACTTTTCAGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: RWVVIHSRPPACALQEEGPLLLT*DFSEGL
Trigger: CAGTCCTTCTGAAAAGTCCCATGTAAGCAGCAAAGG...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGCCTTTGCTGCTTACATaGGACTTTTCAGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: HSRPPACALQEEGIELDWPLLLT*DFSEGL
Trigger: CAGTCCTTCTGAAAAGTCCCATGTAAGCAGCAAAGG...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACCTACTTACGCCCCTTTaGTGCTTACATGGGACTTTT +
Preference number: 2 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHLLTPL*CLHGTF
Trigger: AAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAGTAG...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTTCTGCACAAACGTATTaGTTTCTCCCAACAGCTCCT +
Preference number: 2 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVSAQTY*FLPTAP
Trigger: AGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGA...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCTTACGCCCCTTTGCTaGTTACATGGGACTTTTCAG +
Preference number: 2 (lower is better)
Translates to: RPPACALQEEGIELDWLFLTPLC*LHGTFQ
Trigger: CTGAAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCTACTTACGCCCCTTTaGTGCTTACATGGGACTTTT +
Preference number: 2 (lower is better)
Translates to: EILHKRIAFSQQLLVSRALLTPL*CLHGTF
Trigger: AAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAGTAG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACTACTTACGCCCCTTTaGTGCTTACATGGGACTTTT +
Preference number: 2 (lower is better)
Translates to: SRPPACALQEEGIELDWLLLTPL*CLHGTF
Trigger: AAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAGTAG...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCCTTTGCTGCTTACATaGGACTTTTCAGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDPLLLT*DFSEGL
Trigger: CAGTCCTTCTGAAAAGTCCCATGTAAGCAGCAAAGG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCCTTTGCTGCTTACATaGGACTTTTCAGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAPLLLT*DFSEGL
Trigger: CAGTCCTTCTGAAAAGTCCCATGTAAGCAGCAAAGG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCCTACTTACGCCCCTTTaGTGCTTACATGGGACTTTT +
Preference number: 2 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLLLTPL*CLHGTF
Trigger: AAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAGTAG...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCCTTTGCTGCTTACATaGGACTTTTCAGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: RPPACALQEEGIELDWLFPLLLT*DFSEGL
Trigger: CAGTCCTTCTGAAAAGTCCCATGTAAGCAGCAAAGG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGATGGTGTCGAGAGCCTTaGCCACACTGGGCATCTCCT +
Preference number: 2 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRWCREP*PHWASP
Trigger: AGGAGATGCCCAGTGTGGCCAAGGCTCTCGACACCA...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCTTACGCCCCTTTGCTaGTTACATGGGACTTTTCAG +
Preference number: 2 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSLTPLC*LHGTFQ
Trigger: CTGAAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATTGGTGTCGAGAGCCTTaGCCACACTGGGCATCTCCT +
Preference number: 2 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYWCREP*PHWASP
Trigger: AGGAGATGCCCAGTGTGGCCAAGGCTCTCGACACCA...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGGCGGAGCTAGGATCTaGACCCAGTGGAGAAAGGTG +
Preference number: 2 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIGGARI*TQWRKV
Trigger: CACCTTTCTCCACTGGGTGCAGATCCTAGCTCCGCC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCTACTTACGCCCCTTTaGTGCTTACATGGGACTTTT +
Preference number: 2 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSLLTPL*CLHGTF
Trigger: AAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAGTAG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAAGGATCTGCACCCAGTaGAGAAAGGTGATGGGGACA +
Preference number: 2 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRRICTQ*RKVMGT
Trigger: TGTCCCCATCACCTTTCTCCACTGGGTGCAGATCCT...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGCCTTGGCCACACTaGGCATCTCCTTCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILEPWPH*ASPSPS
Trigger: AGAAGGAGAAGGAGATGCCCAGTGTGGCCAAGGCTC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTTGGTGTCGAGAGCCTTaGCCACACTGGGCATCTCCT +
Preference number: 2 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIWCREP*PHWASP
Trigger: AGGAGATGCCCAGTGTGGCCAAGGCTCTCGACACCA...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCTGGTGTCGAGAGCCTTaGCCACACTGGGCATCTCCT +
Preference number: 2 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSWCREP*PHWASP
Trigger: AGGAGATGCCCAGTGTGGCCAAGGCTCTCGACACCA...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCTGGTGTCGAGAGCCTTaGCCACACTGGGCATCTCCT +
Preference number: 2 (lower is better)
Translates to: PTENDDEVKGENKLHDSFWCREP*PHWASP
Trigger: AGGAGATGCCCAGTGTGGCCAAGGCTCTCGACACCA...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTTCTCCCAACAGCTCCTaGTGTCGAGAGCCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: PSLFSHKMSYIQHILDSISPNSS*CREPWP
Trigger: TGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGA...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCACGGCCCCCGGCTTGTaGTTTACAAGAAGAGGGGAT +
Preference number: 2 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSTAPGL*FTRRGD
Trigger: ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGT...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCACGGCCCCCGGCTTGTaGTTTACAAGAAGAGGGGAT +
Preference number: 2 (lower is better)
Translates to: PTENDDEVKGENKLHDSFTAPGL*FTRRGD
Trigger: ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGT...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAAGGATCTGCACCCAGTaGAGAAAGGTGATGGGGACA +
Preference number: 2 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILRICTQ*RKVMGT
Trigger: TGTCCCCATCACCTTTCTCCACTGGGTGCAGATCCT...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCGAGCCTTGGCCACACTaGGCATCTCCTTCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: PTENDDEVKGENKLHDSFEPWPH*ASPSPS
Trigger: AGAAGGAGAAGGAGATGCCCAGTGTGGCCAAGGCTC...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGAGCCTTGGCCACACTaGGCATCTCCTTCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIEPWPH*ASPSPS
Trigger: AGAAGGAGAAGGAGATGCCCAGTGTGGCCAAGGCTC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACTTACGCCCCTTTGCTaGTTACATGGGACTTTTCAG +
Preference number: 2 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRLTPLC*LHGTFQ
Trigger: CTGAAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCACTCTCAGGAAGTCCTaGTTGTCATCCCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: PTENDDEVKGENKLHDSFTLRKS*LSSLSH
Trigger: GTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAGT...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTAGGATCTGCACCCAGTaGAGAAAGGTGATGGGGACA +
Preference number: 2 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIRICTQ*RKVMGT
Trigger: TGTCCCCATCACCTTTCTCCACTGGGTGCAGATCCT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR TCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCGTGTTCTCTTCAGACTaGCTCTCAGGAAGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: PTENDDEVKGENKLHDSFVFSSD*LSGSPA
Trigger: AGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACAC...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACTTACGCCCCTTTGCTaGTTACATGGGACTTTTCAG +
Preference number: 2 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSILTPLC*LHGTFQ
Trigger: CTGAAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACTACTTACGCCCCTTTaGTGCTTACATGGGACTTTT +
Preference number: 2 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRLLTPL*CLHGTF
Trigger: AAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAGTAG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGATCTGCACAAACGTATTaGTTTCTCCCAACAGCTCCT +
Preference number: 2 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRSAQTY*FLPTAP
Trigger: AGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGA...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATCTGCACAAACGTATTaGTTTCTCCCAACAGCTCCT +
Preference number: 2 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRSAQTY*FLPTAP
Trigger: AGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGA...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCCTTTGCTGCTTACATaGGACTTTTCAGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLPLLLT*DFSEGL
Trigger: CAGTCCTTCTGAAAAGTCCCATGTAAGCAGCAAAGG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACCTTTGCTGCTTACATaGGACTTTTCAGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRPLLLT*DFSEGL
Trigger: CAGTCCTTCTGAAAAGTCCCATGTAAGCAGCAAAGG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCTACTTACGCCCCTTTaGTGCTTACATGGGACTTTT +
Preference number: 2 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYLLTPL*CLHGTF
Trigger: AAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAGTAG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATTCTGCACAAACGTATTaGTTTCTCCCAACAGCTCCT +
Preference number: 2 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYSAQTY*FLPTAP
Trigger: AGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGA...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACCTTTGCTGCTTACATaGGACTTTTCAGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILPLLLT*DFSEGL
Trigger: CAGTCCTTCTGAAAAGTCCCATGTAAGCAGCAAAGG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR GCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCTCTGCACAAACGTATTaGTTTCTCCCAACAGCTCCT +
Preference number: 2 (lower is better)
Translates to: PTENDDEVKGENKLHDSFSAQTY*FLPTAP
Trigger: AGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGA...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCCTTTGCTGCTTACATaGGACTTTTCAGAAGGACTG +
Preference number: 2 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSPLLLT*DFSEGL
Trigger: CAGTCCTTCTGAAAAGTCCCATGTAAGCAGCAAAGG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR CCA 72 bp CCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTaGGCATCTCCTTCTCCTTCTTCCCGGAGGCCGGGG +
Preference number: 3 (lower is better)
Translates to: PNSSWCREPWPH*ASPSPSSRRPG
Trigger: CCCCGGCCTCCGGGAAGAAGGAGAAGGAGATGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CAA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCTGGTGTCGAGAGCCTaGGCCACACTGGGCATCTCC +
Preference number: 3 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTALVSRA*ATLGIS
Trigger: GGAGATGCCCAGTGTGGCCAAGGCTCTCGACACCAG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CAA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGCTGGTGTCGAGAGCCTaGGCCACACTGGGCATCTCC +
Preference number: 3 (lower is better)
Translates to: HSRPPACALQEEGIELDWLVSRA*ATLGIS
Trigger: GGAGATGCCCAGTGTGGCCAAGGCTCTCGACACCAG...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR GCA 72 bp CCCCTTTGCTGCTTACATGGGACTTTTCAGAAGGACTaGCCAGGAGGCGGAGCTAGGATCTGCACCCAGTGG +
Preference number: 3 (lower is better)
Translates to: PLCCLHGTFQKD*PGGGARICTQW
Trigger: CCACTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATGTAAGCAGCAAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR GCA 72 bp GTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATaGGAGGTGCCTCGTGGCTACTTACGCCCCTTTGCT +
Preference number: 3 (lower is better)
Translates to: VLLVIPQPLKKA*EVPRGYLRPFA
Trigger: AGCAAAGGGGCGTAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR CCA 72 bp TGCCTCGTGGCTACTTACGCCCCTTTGCTGCTTACATaGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGC +
Preference number: 3 (lower is better)
Translates to: CLVATYAPLLLT*DFSEGLPRRRS
Trigger: GCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATGTAAGCAGCAAAGGGGCGTAAGTAGCCACGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CAA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACTGGTGTCGAGAGCCTaGGCCACACTGGGCATCTCC +
Preference number: 3 (lower is better)
Translates to: SRPPACALQEEGIELDWLLVSRA*ATLGIS
Trigger: GGAGATGCCCAGTGTGGCCAAGGCTCTCGACACCAG...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CAA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCTGGTGTCGAGAGCCTaGGCCACACTGGGCATCTCC +
Preference number: 3 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDLVSRA*ATLGIS
Trigger: GGAGATGCCCAGTGTGGCCAAGGCTCTCGACACCAG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR CCA 72 bp AATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTaGGTTGTAATACACTCACGGCCCCCGGCTTGTGCT +
Preference number: 3 (lower is better)
Translates to: NGSRFPLKMGRR*VVIHSRPPACA
Trigger: AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR CCA 72 bp TTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTaGTGTCGAGAGCCTTGGCCACACTGGGCATCTCCT +
Preference number: 3 (lower is better)
Translates to: FCTNVLLSPNSS*CREPWPHWASP
Trigger: AGGAGATGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CAA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTTTCTGCACAAACGTATaGCTTTCTCCCAACAGCTCC +
Preference number: 3 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVFCTNV*LSPNSS
Trigger: GGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAA...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CAA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACTGGTGTCGAGAGCCTaGGCCACACTGGGCATCTCC +
Preference number: 3 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRLVSRA*ATLGIS
Trigger: GGAGATGCCCAGTGTGGCCAAGGCTCTCGACACCAG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CAA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTCTGCACAAACGTATaGCTTTCTCCCAACAGCTCC +
Preference number: 3 (lower is better)
Translates to: SRPPACALQEEGIELDWLFCTNV*LSPNSS
Trigger: GGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAA...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CAA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCTCACGGCCCCCGGCTaGTGCTTTACAAGAAGAGGG +
Preference number: 3 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSLTAPG*CFTRRG
Trigger: CCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CAA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCGGTTCTCGCTTTCCGTaGAAGATGGGCCGCCGTTGG +
Preference number: 3 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSGSRFP*KMGRRW
Trigger: CCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACC...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CAA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCGGTTCTCGCTTTCCGTaGAAGATGGGCCGCCGTTGG +
Preference number: 3 (lower is better)
Translates to: PTENDDEVKGENKLHDSFGSRFP*KMGRRW
Trigger: CCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACC...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CAA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCTGCACAAACGTATaGCTTTCTCCCAACAGCTCC +
Preference number: 3 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRFCTNV*LSPNSS
Trigger: GGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAA...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CAA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATTTCTGCACAAACGTATaGCTTTCTCCCAACAGCTCC +
Preference number: 3 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYFCTNV*LSPNSS
Trigger: GGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAA...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
3UTR-3UTR CAA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTTTCTGCACAAACGTATaGCTTTCTCCCAACAGCTCC +
Preference number: 3 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIFCTNV*LSPNSS
Trigger: GGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAA...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCCCGGCGCCCTCCTCCTaGGGCAGACGCCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCPAPSS*GRRQDC
Trigger: GCAGTCCTGGCGTCTGCCTCAGGAGGAGGGCGCCGG...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGGGCCACTGGGCTGCTaGGCAACCCAGCCCGCACGC +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQGPLGC*ATQPAR
Trigger: GCGTGCGGGCTGGGTTGCTCAGCAGCCCAGTGGCCC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCCGGCGCCCTCCTCCTaGGGCAGACGCCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAPAPSS*GRRQDC
Trigger: GCAGTCCTGGCGTCTGCCTCAGGAGGAGGGCGCCGG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACCGGCGCCCTCCTCCTaGGGCAGACGCCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAPAPSS*GRRQDC
Trigger: GCAGTCCTGGCGTCTGCCTCAGGAGGAGGGCGCCGG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGGCAGACGCCAGGACTaGATGGGGGCCGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAGRRQD*MGAEGP
Trigger: AGGGCCCTCGGCCCCCATGCAGTCCTGGCGTCTGCC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGTCCAGACCGCAGGGTaGACCACCACCGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCVQTAG*TTTAFP
Trigger: GGGGAAGGCGGTGGTGGTCCACCCTGCGGTCTGGAC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCCCCACCACGGGCCACTaGGCTGCTGAGCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCPTTGH*AAEQPS
Trigger: GCTGGGTTGCTCAGCAGCCCAGTGGCCCGTGGTGGG...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGACGCCAGGACTGCATaGGGGCCGAGGGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACADARTA*GPRALA
Trigger: AGCCAGGGCCCTCGGCCCCCATGCAGTCCTGGCGTC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGACGCCAGGACTGCATaGGGGCCGAGGGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQDARTA*GPRALA
Trigger: AGCCAGGGCCCTCGGCCCCCATGCAGTCCTGGCGTC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGGGCCACTGGGCTGCTaGGCAACCCAGCCCGCACGC +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGGPLGC*ATQPAR
Trigger: GCGTGCGGGCTGGGTTGCTCAGCAGCCCAGTGGCCC...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCAGGGTGGTGGCAGCATaGGCCAGCGGGACCCATTGG +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCRVVAA*ASGTHW
Trigger: CCAATGGGTCCCGCTGGCTCATGCTGCCACCACCCT...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCCGCTGGCTGTTCGATaGAGCCCGGGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAPLAVR*SPGTCR
Trigger: CCTGCAGGTGCCCGGGCTTCATCGAACAGCCAGCGG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCCCGCCCCAGAAGGATaGGGAGCGGGTCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAPAPEG*GAGQRA
Trigger: TGCCCTCTGACCCGCTCCTCATCCTTCTGGGGCGGG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCCGGCGCCCTCCTCCTaGGGCAGACGCCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHPAPSS*GRRQDC
Trigger: GCAGTCCTGGCGTCTGCCTCAGGAGGAGGGCGCCGG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGCCGGCGCCCTCCTCCTaGGGCAGACGCCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWPAPSS*GRRQDC
Trigger: GCAGTCCTGGCGTCTGCCTCAGGAGGAGGGCGCCGG...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCCGGCGCCCTCCTCCTaGGGCAGACGCCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGPAPSS*GRRQDC
Trigger: GCAGTCCTGGCGTCTGCCTCAGGAGGAGGGCGCCGG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGCCTCGGAGTCCGCGCTaGCCGGGTCCTTTTCCGTCG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQPRSPR*PGPFPS
Trigger: CGACGGAAAAGGACCCGGGCAGCGCGGACTCCGAGG...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCACCACGAGCTGCCGCTaGAGTGCCGGCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCTTSCR*SAGRKR
Trigger: TCGCTTCCTGCCGGCACTGCAGCGGCAGCTCGTGGT...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGCCTGCTGGTCCAGCTaGTTGCTGCGCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCACWSS*LLRSRD
Trigger: GTCCCTGGAGCGCAGCAAGCAGCTGGACCAGCAGGC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGGCAGACGCCAGGACTaGATGGGGGCCGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLGRRQD*MGAEGP
Trigger: AGGGCCCTCGGCCCCCATGCAGTCCTGGCGTCTGCC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGTCCAGACCGCAGGGTaGACCACCACCGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQVQTAG*TTTAFP
Trigger: GGGGAAGGCGGTGGTGGTCCACCCTGCGGTCTGGAC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGAGAGCAGCTGCCACTaGGCTGGGGCTCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAESSCH*AGAPAH
Trigger: GTGGGCAGGAGCCCCAGCCCAGTGGCAGCTGCTCTC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGAGAGCAGCTGCCACTaGGCTGGGGCTCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQESSCH*AGAPAH
Trigger: GTGGGCAGGAGCCCCAGCCCAGTGGCAGCTGCTCTC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGGGGGTAGAGGGTGGTaGCAGCATGAGCCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCGGRGW*QHEPAG
Trigger: TCCCGCTGGCTCATGCTGCCACCACCCTCTACCCCC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGGCCGTCGCCGTCTGTaGGGATCCCGGAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAGRRRL*GSRRSL
Trigger: CAGCGACCTCCGGGATCCCCACAGACGGCGACGGCC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGGCCGTCGCCGTCTGTaGGGATCCCGGAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLGRRRL*GSRRSL
Trigger: CAGCGACCTCCGGGATCCCCACAGACGGCGACGGCC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGGCTGGAGCGCCTGCTaGTCCAGCTGCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAGWSAC*SSCLLR
Trigger: GCGCAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGCCAGGCTGTTCCGGCTaGAGCGCCTGCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQPGCSG*SACWSS
Trigger: GCTGGACCAGCAGGCGCTCCAGCCGGAACAGCCTGG...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGCCTGGGCAAGGGGCTaGCAGGCGGATGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCAWARG*QADVLG
Trigger: TCCAAGCACATCCGCCTGCCAGCCCCTTGCCCAGGC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGCTGGGTTCCAGGCCTaGGCAAGGGGCTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLAGFQA*ARGWQA
Trigger: CGCCTGCCAGCCCCTTGCCCAGGCCTGGAACCCAGC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGACGCCAGGACTGCATaGGGGCCGAGGGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLDARTA*GPRALA
Trigger: AGCCAGGGCCCTCGGCCCCCATGCAGTCCTGGCGTC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTACGGAGTCGCCCGGGCTaGGGGCGGAAGGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLRSRPG*GRKGRQ
Trigger: CTGCCTTCCCTTCCGCCCCCAGCCCGGGCGACTCCG...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCCCGTTCTCCCGAGGCTaGGAGCAGATGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCPFSRG*EQMKGL
Trigger: GAGCCCCTTCATCTGCTCTCAGCCTCGGGAGAACGG...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTCCAGGGCGTTGGTaGGCTCCTCGGGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCFPGRW*APRAAR
Trigger: ACGAGCAGCCCGAGGAGCTCACCAACGCCCTGGAAA...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGAACCCCTGTGGCGATaGTCACTGCCTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCEPLWR*SLPAGL
Trigger: CAGCCCAGCAGGCAGTGATCATCGCCACAGGGGTTC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACCGCTGGCTGTTCGATaGAGCCCGGGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAPLAVR*SPGTCR
Trigger: CCTGCAGGTGCCCGGGCTTCATCGAACAGCCAGCGG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGTTGCTGCCTGGCGCCTaGGAGGCCTCTGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQLLPGA*EASEPE
Trigger: CTCTGGCTCAGAGGCCTCTCAGGCGCCAGGCAGCAA...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCCCGGCGCCCTCCTCCTaGGGCAGACGCCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSPAPSS*GRRQDC
Trigger: GCAGTCCTGGCGTCTGCCTCAGGAGGAGGGCGCCGG...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGGCCAGCCTGCGGGCTaGTTTGCGGAGGATGTACAC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCGQPAG*FAEDVH
Trigger: GTGTACATCCTCCGCAAAGCAGCCCGCAGGCTGGCC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTAGACCTGGGCCAGCCTaGGGGCTGCTTTGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACARPGPA*GLLCGG
Trigger: TCCTCCGCAAAGCAGCCCGCAGGCTGGCCCAGGTCT...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGACAGGCCACCTCCCTaGTGGCCCACAATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCDRPPP*WPTISH
Trigger: GTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCTGTC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGACCACGAGCTGCCGCTaGAGTGCCGGCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQTTSCR*SAGRKR
Trigger: TCGCTTCCTGCCGGCACTGCAGCGGCAGCTCGTGGT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTACCACGAGCTGCCGCTaGAGTGCCGGCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACATTSCR*SAGRKR
Trigger: TCGCTTCCTGCCGGCACTGCAGCGGCAGCTCGTGGT...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGCGCTCCAGGGACTGTaGGGGGAGCTTCGGGCACTT +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAALQGL*GELRAL
Trigger: AAGTGCCCGAAGCTCCCCGCACAGTCCCTGGAGCGC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGGTCCAGCTGCTTGCTaGGCTCCAGGGACTGTGCGG +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAGPAAC*APGTVR
Trigger: CCGCACAGTCCCTGGAGCGCAGCAAGCAGCTGGACC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGCCTGCTGGTCCAGCTaGTTGCTGCGCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAACWSS*LLRSRD
Trigger: GTCCCTGGAGCGCAGCAAGCAGCTGGACCAGCAGGC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGCCTGCTGGTCCAGCTaGTTGCTGCGCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQACWSS*LLRSRD
Trigger: GTCCCTGGAGCGCAGCAAGCAGCTGGACCAGCAGGC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCCACCGTGTCCAGCAGTaGCCGCATGCCCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCHRVQQ*PHAHSH
Trigger: ATGGCTGTGGGCATGCGGGCACTGCTGGACACGGTG...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGGCAGACGCCAGGACTaGATGGGGGCCGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGGRRQD*MGAEGP
Trigger: AGGGCCCTCGGCCCCCATGCAGTCCTGGCGTCTGCC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCCCACCACGGGCCACTaGGCTGCTGAGCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLPTTGH*AAEQPS
Trigger: GCTGGGTTGCTCAGCAGCCCAGTGGCCCGTGGTGGG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGAGAGCAGCTGCCACTaGGCTGGGGCTCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLESSCH*AGAPAH
Trigger: GTGGGCAGGAGCCCCAGCCCAGTGGCAGCTGCTCTC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTACTAGGCTCTGCATCTaGGCCCAGGCTCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACATRLCI*AQARPS
Trigger: CGACGGCCGAGCCTGGGCCCAGATGCAGAGCCTAGT...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGGCTGGAGCGCCTGCTaGTCCAGCTGCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLGWSAC*SSCLLR
Trigger: GCGCAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCCAGGCTGTTCCGGCTaGAGCGCCTGCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLPGCSG*SACWSS
Trigger: GCTGGACCAGCAGGCGCTCCAGCCGGAACAGCCTGG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGCTGGGTTCCAGGCCTaGGCAAGGGGCTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHAGFQA*ARGWQA
Trigger: CGCCTGCCAGCCCCTTGCCCAGGCCTGGAACCCAGC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGCTGGGTTCCAGGCCTaGGCAAGGGGCTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGAGFQA*ARGWQA
Trigger: CGCCTGCCAGCCCCTTGCCCAGGCCTGGAACCCAGC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGGACATAGGCGGGGCTaGGAGCCGCTGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLGHRRG*EPLSRQ
Trigger: CTGCCTGGACAGCGGCTCCCAGCCCCGCCTATGTCC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGACGCCAGGACTGCATaGGGGCCGAGGGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGDARTA*GPRALA
Trigger: AGCCAGGGCCCTCGGCCCCCATGCAGTCCTGGCGTC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGCCGTTCTCCCGAGGCTaGGAGCAGATGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQPFSRG*EQMKGL
Trigger: GAGCCCCTTCATCTGCTCTCAGCCTCGGGAGAACGG...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGGGCCACTGGGCTGCTaGGCAACCCAGCCCGCACGC +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLGPLGC*ATQPAR
Trigger: GCGTGCGGGCTGGGTTGCTCAGCAGCCCAGTGGCCC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCCGGAGGTCGCTGTGCTaGGCGTCCTGTGTGAACTCA +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCRRSLC*ASCVNS
Trigger: TGAGTTCACACAGGACGCTCAGCACAGCGACCTCCG...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGGCCCGGTCCTCTTCTaGACTCTCCTCCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCGPVLF*TLLLIL
Trigger: CAGGATGAGGAGGAGAGTTCAGAAGAGGACCGGGCC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCCGCTGGCTGTTCGATaGAGCCCGGGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGPLAVR*SPGTCR
Trigger: CCTGCAGGTGCCCGGGCTTCATCGAACAGCCAGCGG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCGCTGGCTGTTCGATaGAGCCCGGGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAPLAVR*SPGTCR
Trigger: CCTGCAGGTGCCCGGGCTTCATCGAACAGCCAGCGG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGCGGGCCAAACGCCCTaGAGCCGACTTGCCATTACA +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCAGQTP*SRLAIT
Trigger: TGTAATGGCAAGTCGGCTTCAGGGCGTTTGGCCCGC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCAGACAAGATGGAGCCTaGCTGGGCTTTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCRQDGA*LGFGEP
Trigger: GGGCTCCCCAAAGCCCAGTCAGGCTCCATCTTGTCT...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCATTGCTGCCTGGCGCCTaGGAGGCCTCTGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWALLPGA*EASEPE
Trigger: CTCTGGCTCAGAGGCCTCTCAGGCGCCAGGCAGCAA...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGGGCCCACTCACCTCTaGCAACAGGTCTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQGPTHL*QQVFPA
Trigger: AGCCGGGAAGACCTGTTGTCAGAGGTGAGTGGGCCC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCCCGCCCCAGAAGGATaGGGAGCGGGTCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHPAPEG*GAGQRA
Trigger: TGCCCTCTGACCCGCTCCTCATCCTTCTGGGGCGGG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGCCCGCCCCAGAAGGATaGGGAGCGGGTCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWPAPEG*GAGQRA
Trigger: TGCCCTCTGACCCGCTCCTCATCCTTCTGGGGCGGG...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGACAGGGGTTCTTCCTaGCTGCTGGGCAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCDRGSS*LLGRRS
Trigger: AGACCTCCTGCCCAGCAGTCAGGAAGAACCCCTGTC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGCCTCGGAGTCCGCGCTaGCCGGGTCCTTTTCCGTCG +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGPRSPR*PGPFPS
Trigger: CGACGGAAAAGGACCCGGGCAGCGCGGACTCCGAGG...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGACGGGTTACAGACCGTaGGGAGACACCAGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQTGYRP*GDTSSA
Trigger: CGCGGAGCTGGTGTCTCCGCACGGTCTGTAACCCGT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGTGTGGGCACGCTCCTaGAGGATCGCATGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCVWARS*RIACRS
Trigger: AGAACGGCATGCGATCCTGCAGGAGCGTGCCCACAC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGTGAACGAGAGCAGCTaGCACTGGGCTGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQVNESS*HWAGAP
Trigger: AGGAGCCCCAGCCCAGTGGCAGCTGCTCTCGTTCAC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGTGAACGAGAGCAGCTaGCACTGGGCTGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAVNESS*HWAGAP
Trigger: AGGAGCCCCAGCCCAGTGGCAGCTGCTCTCGTTCAC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGCACAGTCCTGCCAGATaGCTCCGATGGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQHSPAR*LRWGPG
Trigger: CCCAGGTCCCCATCGGAGGCATCTGGCAGGACTGTG...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCCACAGAACTAGGCTCTaGATCTGGGCCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCHRTRL*IWAQAR
Trigger: CCGAGCCTGGGCCCAGATGCAGAGCCTAGTTCTGTG...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGCGCTCCAGGGACTGTaGGGGGAGCTTCGGGCACTT +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAALQGL*GELRAL
Trigger: AAGTGCCCGAAGCTCCCCGCACAGTCCCTGGAGCGC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGGTCCAGCTGCTTGCTaGGCTCCAGGGACTGTGCGG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLGPAAC*APGTVR
Trigger: CCGCACAGTCCCTGGAGCGCAGCAAGCAGCTGGACC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTTCCGGCTGGAGCGCCTaGTGGTCCAGCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLSGWSA*WSSCLL
Trigger: CAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCCGGA...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGCGATGATCACTGCCTaGTGGGCTGGCCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLAMITA*WAGPVL
Trigger: GAGGACCGGGCCAGCCCAGCAGGCAGTGATCATCGC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGTGTGGCGATGATCACTaGCTGCTGGGCTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQCGDDH*LLGWPG
Trigger: ACCGGGCCAGCCCAGCAGGCAGTGATCATCGCCACA...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGCAGCACCCTCAGCATaGCGAGAATCTTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCAAPSA*RESWCR
Trigger: GCGGCACCAAGATTCTCGGCATGCTGAGGGTGCTGC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGCACCGTGTCCAGCAGTaGCCGCATGCCCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQHRVQQ*PHAHSH
Trigger: ATGGCTGTGGGCATGCGGGCACTGCTGGACACGGTG...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCACCGTGTCCAGCAGTaGCCGCATGCCCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAHRVQQ*PHAHSH
Trigger: ATGGCTGTGGGCATGCGGGCACTGCTGGACACGGTG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGTCCAGACCGCAGGGTaGACCACCACCGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLVQTAG*TTTAFP
Trigger: GGGGAAGGCGGTGGTGGTCCACCCTGCGGTCTGGAC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGTCCAGACCGCAGGGTaGACCACCACCGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGVQTAG*TTTAFP
Trigger: GGGGAAGGCGGTGGTGGTCCACCCTGCGGTCTGGAC...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGTCCAGACCGCAGGGTaGACCACCACCGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAVQTAG*TTTAFP
Trigger: GGGGAAGGCGGTGGTGGTCCACCCTGCGGTCTGGAC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCCCACCACGGGCCACTaGGCTGCTGAGCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHPTTGH*AAEQPS
Trigger: GCTGGGTTGCTCAGCAGCCCAGTGGCCCGTGGTGGG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTACCCACCACGGGCCACTaGGCTGCTGAGCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLPTTGH*AAEQPS
Trigger: GCTGGGTTGCTCAGCAGCCCAGTGGCCCGTGGTGGG...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTCAGCTGCCACTGGGCTaGGGCTCCTGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVQLPLG*GSCPPR
Trigger: CCGTGGTGGGCAGGAGCCCCAGCCCAGTGGCAGCTG...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCCAGCTGCCACTGGGCTaGGGCTCCTGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSQLPLG*GSCPPR
Trigger: CCGTGGTGGGCAGGAGCCCCAGCCCAGTGGCAGCTG...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGAGTGGGGGTAGAGGGTaGTGGCAGCATGAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQSGGRG*WQHEPA
Trigger: CGCTGGCTCATGCTGCCACCACCCTCTACCCCCACT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGGCCGTCGCCGTCTGTaGGGATCCCGGAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSGRRRL*GSRRSL
Trigger: CAGCGACCTCCGGGATCCCCACAGACGGCGACGGCC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTAGGCCACCTCCCTGCTaGCCCACAATCTCCCACACG +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACARPPPC*PTISHT
Trigger: CGTGTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCT...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGGCTGGAGCGCCTGCTaGTCCAGCTGCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAGWSAC*SSCLLR
Trigger: GCGCAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGGCTGGAGCGCCTGCTaGTCCAGCTGCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLGWSAC*SSCLLR
Trigger: GCGCAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGCCAGGCTGTTCCGGCTaGAGCGCCTGCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWPGCSG*SACWSS
Trigger: GCTGGACCAGCAGGCGCTCCAGCCGGAACAGCCTGG...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCCAGGCTGTTCCGGCTaGAGCGCCTGCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGPGCSG*SACWSS
Trigger: GCTGGACCAGCAGGCGCTCCAGCCGGAACAGCCTGG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGCCAGGCTGTTCCGGCTaGAGCGCCTGCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGPGCSG*SACWSS
Trigger: GCTGGACCAGCAGGCGCTCCAGCCGGAACAGCCTGG...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACCTCCGCTCCCCGCTTaGGCTCCTACGCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAPPLPA*APTLQA
Trigger: AGCCTGAAGCGTAGGAGCCCAAGCGGGGAGCGGAGG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGAGGCTGCTCCAATGTaGGCCGTGGTGTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAEAAPM*AVVCGA
Trigger: GGCTCCACACACCACGGCCCACATTGGAGCAGCCTC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGCCTGGGCAAGGGGCTaGCAGGCGGATGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAAWARG*QADVLG
Trigger: TCCAAGCACATCCGCCTGCCAGCCCCTTGCCCAGGC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGCTGGGTTCCAGGCCTaGGCAAGGGGCTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHAGFQA*ARGWQA
Trigger: CGCCTGCCAGCCCCTTGCCCAGGCCTGGAACCCAGC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGGACATAGGCGGGGCTaGGAGCCGCTGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLGHRRG*EPLSRQ
Trigger: CTGCCTGGACAGCGGCTCCCAGCCCCGCCTATGTCC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGGACATAGGCGGGGCTaGGAGCCGCTGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAGHRRG*EPLSRQ
Trigger: CTGCCTGGACAGCGGCTCCCAGCCCCGCCTATGTCC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCAGCCCTGCCCACAGCTaGACACCAACGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCSPAHS*TPTMPK
Trigger: CTTTGGCATCGTTGGTGTTCAGCTGTGGGCAGGGCT...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCCACTCAGCGGGAGGCTaGAATTCTCAGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCHSAGG*NSQGGS
Trigger: GCTTCCTCCCTGAGAATTTCAGCCTCCCGCTGAGTG...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGGGCCACTGGGCTGCTaGGCAACCCAGCCCGCACGC +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESGPLGC*ATQPAR
Trigger: GCGTGCGGGCTGGGTTGCTCAGCAGCCCAGTGGCCC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCAGACAGACGACGGTGTaGACGAGAGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCRQTTV*TRAAAT
Trigger: AGTGGCAGCTGCTCTCGTTCACACCGTCGTCTGTCT...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCAGGGTGGTGGCAGCATaGGCCAGCGGGACCCATTGG +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTARVVAA*ASGTHW
Trigger: CCAATGGGTCCCGCTGGCTCATGCTGCCACCACCCT...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTAGGGTGGTGGCAGCATaGGCCAGCGGGACCCATTGG +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGRVVAA*ASGTHW
Trigger: CCAATGGGTCCCGCTGGCTCATGCTGCCACCACCCT...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGCTTGTGCATGGAGCTaGAGGGCCCAGGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAACAWS*RAQVGC
Trigger: ACATCCCACCTGGGCCCTTCAGCTCCATGCACAAGC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGCGGAGGTCGCTGTGCTaGGCGTCCTGTGTGAACTCA +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQRRSLC*ASCVNS
Trigger: TGAGTTCACACAGGACGCTCAGCACAGCGACCTCCG...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCATTTCCAGGGCGTTGGTaGGCTCCTCGGGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAFPGRW*APRAAR
Trigger: ACGAGCAGCCCGAGGAGCTCACCAACGCCCTGGAAA...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTTTTCCAGGGCGTTGGTaGGCTCCTCGGGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLFPGRW*APRAAR
Trigger: ACGAGCAGCCCGAGGAGCTCACCAACGCCCTGGAAA...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTCATCCTGGCTCTCCTaGCCCTCTCCAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACASSWLS*PSPDSR
Trigger: CCTGCTGTCTGGAGAGGGTCAGGAGAGCCAGGATGA...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGGCCCGGTCCTCTTCTaGACTCTCCTCCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQGPVLF*TLLLIL
Trigger: CAGGATGAGGAGGAGAGTTCAGAAGAGGACCGGGCC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGAACCCCTGTGGCGATaGTCACTGCCTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLEPLWR*SLPAGL
Trigger: CAGCCCAGCAGGCAGTGATCATCGCCACAGGGGTTC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTCCGCTGGCTGTTCGATaGAGCCCGGGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVPLAVR*SPGTCR
Trigger: CCTGCAGGTGCCCGGGCTTCATCGAACAGCCAGCGG...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCCCGCTGGCTGTTCGATaGAGCCCGGGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSPLAVR*SPGTCR
Trigger: CCTGCAGGTGCCCGGGCTTCATCGAACAGCCAGCGG...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGAGACAAGATGGAGCCTaGCTGGGCTTTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQRQDGA*LGFGEP
Trigger: GGGCTCCCCAAAGCCCAGTCAGGCTCCATCTTGTCT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTATTGCTGCCTGGCGCCTaGGAGGCCTCTGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLLLPGA*EASEPE
Trigger: CTCTGGCTCAGAGGCCTCTCAGGCGCCAGGCAGCAA...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGGGCAGGAGGTCTCCTaGAATCCAGCTCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAGQEVS*NPAQLR
Trigger: ACGGAGCTGAGCTGGATTTCAGGAGACCTCCTGCCC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGACAGGGGTTCTTCCTaGCTGCTGGGCAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQDRGSS*LLGRRS
Trigger: AGACCTCCTGCCCAGCAGTCAGGAAGAACCCCTGTC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCCGGCGCCCTCCTCCTaGGGCAGACGCCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFPAPSS*GRRQDC
Trigger: GCAGTCCTGGCGTCTGCCTCAGGAGGAGGGCGCCGG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAACGGGTTACAGACCGTaGGGAGACACCAGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWATGYRP*GDTSSA
Trigger: CGCGGAGCTGGTGTCTCCGCACGGTCTGTAACCCGT...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGGCCAGCCTGCGGGCTaGTTTGCGGAGGATGTACAC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLGQPAG*FAEDVH
Trigger: GTGTACATCCTCCGCAAAGCAGCCCGCAGGCTGGCC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAAGACCTGGGCCAGCCTaGGGGCTGCTTTGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLRPGPA*GLLCGG
Trigger: TCCTCCGCAAAGCAGCCCGCAGGCTGGCCCAGGTCT...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTAGACCTGGGCCAGCCTaGGGGCTGCTTTGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGRPGPA*GLLCGG
Trigger: TCCTCCGCAAAGCAGCCCGCAGGCTGGCCCAGGTCT...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGAGACCTGGGCCAGCCTaGGGGCTGCTTTGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWRPGPA*GLLCGG
Trigger: TCCTCCGCAAAGCAGCCCGCAGGCTGGCCCAGGTCT...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGTGAACGAGAGCAGCTaGCACTGGGCTGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLVNESS*HWAGAP
Trigger: AGGAGCCCCAGCCCAGTGGCAGCTGCTCTCGTTCAC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGGACTCTGGCTCCCCTaGTCCTGTCCGGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLGLWLP*SCPGTV
Trigger: TACTGTGCCCGGACAGGAGCAGGGGAGCCAGAGTCC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGGACTCTGGCTCCCCTaGTCCTGTCCGGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAGLWLP*SCPGTV
Trigger: TACTGTGCCCGGACAGGAGCAGGGGAGCCAGAGTCC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGCACAGAACTAGGCTCTaGATCTGGGCCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQHRTRL*IWAQAR
Trigger: CCGAGCCTGGGCCCAGATGCAGAGCCTAGTTCTGTG...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGACAGGCCACCTCCCTaGTGGCCCACAATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWADRPPP*WPTISH
Trigger: GTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCTGTC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCGCTCCAGGGACTGTaGGGGGAGCTTCGGGCACTT +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGALQGL*GELRAL
Trigger: AAGTGCCCGAAGCTCCCCGCACAGTCCCTGGAGCGC...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGGTCCAGCTGCTTGCTaGGCTCCAGGGACTGTGCGG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLGPAAC*APGTVR
Trigger: CCGCACAGTCCCTGGAGCGCAGCAAGCAGCTGGACC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGGTCCAGCTGCTTGCTaGGCTCCAGGGACTGTGCGG +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAGPAAC*APGTVR
Trigger: CCGCACAGTCCCTGGAGCGCAGCAAGCAGCTGGACC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGCCTGCTGGTCCAGCTaGTTGCTGCGCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGACWSS*LLRSRD
Trigger: GTCCCTGGAGCGCAGCAAGCAGCTGGACCAGCAGGC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACTCCGGCTGGAGCGCCTaGTGGTCCAGCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHSGWSA*WSSCLL
Trigger: CAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCCGGA...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGCGATGATCACTGCCTaGTGGGCTGGCCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGAMITA*WAGPVL
Trigger: GAGGACCGGGCCAGCCCAGCAGGCAGTGATCATCGC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGCGATGATCACTGCCTaGTGGGCTGGCCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHAMITA*WAGPVL
Trigger: GAGGACCGGGCCAGCCCAGCAGGCAGTGATCATCGC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCATGTGGCGATGATCACTaGCTGCTGGGCTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWACGDDH*LLGWPG
Trigger: ACCGGGCCAGCCCAGCAGGCAGTGATCATCGCCACA...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTTGTGGCGATGATCACTaGCTGCTGGGCTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLCGDDH*LLGWPG
Trigger: ACCGGGCCAGCCCAGCAGGCAGTGATCATCGCCACA...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATGGCAGACGCCAGGACTaGATGGGGGCCGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDGRRQD*MGAEGP
Trigger: AGGGCCCTCGGCCCCCATGCAGTCCTGGCGTCTGCC...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCTTCCCCGCGCAGTGTaGGCACGCTCCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGLPRAV*ARSCRI
Trigger: GATCCTGCAGGAGCGTGCCCACACTGCGCGGGGAAG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCTTCCCCGCGCAGTGTaGGCACGCTCCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHLPRAV*ARSCRI
Trigger: GATCCTGCAGGAGCGTGCCCACACTGCGCGGGGAAG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCTTCCCCGCGCAGTGTaGGCACGCTCCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTALPRAV*ARSCRI
Trigger: GATCCTGCAGGAGCGTGCCCACACTGCGCGGGGAAG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCCCCACCACGGGCCACTaGGCTGCTGAGCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSPTTGH*AAEQPS
Trigger: GCTGGGTTGCTCAGCAGCCCAGTGGCCCGTGGTGGG...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGAGAGCAGCTGCCACTaGGCTGGGGCTCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSESSCH*AGAPAH
Trigger: GTGGGCAGGAGCCCCAGCCCAGTGGCAGCTGCTCTC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACCTGTCCTGGATCTCTaGGCTGGCCCGGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAPVLDL*AGPGNS
Trigger: AGAGTTCCCCGGGCCAGCCCAGAGATCCAGGACAGG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTTTGGCATCCCTGTCCTaGATCTCTGGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLLASLS*ISGLAR
Trigger: CCGGGCCAGCCCAGAGATCCAGGACAGGGATGCCAA...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGGGGGTAGAGGGTGGTaGCAGCATGAGCCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHGGRGW*QHEPAG
Trigger: TCCCGCTGGCTCATGCTGCCACCACCCTCTACCCCC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGGGGGTAGAGGGTGGTaGCAGCATGAGCCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGGGRGW*QHEPAG
Trigger: TCCCGCTGGCTCATGCTGCCACCACCCTCTACCCCC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
60% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGGGGGTAGAGGGTGGTaGCAGCATGAGCCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLGGRGW*QHEPAG
Trigger: TCCCGCTGGCTCATGCTGCCACCACCCTCTACCCCC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGGGGGTAGAGGGTGGTaGCAGCATGAGCCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWGGRGW*QHEPAG
Trigger: TCCCGCTGGCTCATGCTGCCACCACCCTCTACCCCC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACGCCTGGCAACGGACTaGCTCCAAGTGGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWARLATD*LQVAVS
Trigger: GCTGACTGCCACTTGGAGCCAGTCCGTTGCCAGGCG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGGCCGTCGCCGTCTGTaGGGATCCCGGAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAGRRRL*GSRRSL
Trigger: CAGCGACCTCCGGGATCCCCACAGACGGCGACGGCC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAACTAGGCTCTGCATCTaGGCCCAGGCTCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLTRLCI*AQARPS
Trigger: CGACGGCCGAGCCTGGGCCCAGATGCAGAGCCTAGT...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTAGGCTCTGCATCTaGGCCCAGGCTCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHTRLCI*AQARPS
Trigger: CGACGGCCGAGCCTGGGCCCAGATGCAGAGCCTAGT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCCTCCGCTCCCCGCTTaGGCTCCTACGCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHPPLPA*APTLQA
Trigger: AGCCTGAAGCGTAGGAGCCCAAGCGGGGAGCGGAGG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCTCCGCTCCCCGCTTaGGCTCCTACGCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAPPLPA*APTLQA
Trigger: AGCCTGAAGCGTAGGAGCCCAAGCGGGGAGCGGAGG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCCTCCGCTCCCCGCTTaGGCTCCTACGCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGPPLPA*APTLQA
Trigger: AGCCTGAAGCGTAGGAGCCCAAGCGGGGAGCGGAGG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGATGATCACTGCCTGCTaGGCTGGCCCGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQMITAC*AGPVLF
Trigger: GAAGAGGACCGGGCCAGCCCAGCAGGCAGTGATCAT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTATGATCACTGCCTGCTaGGCTGGCCCGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAMITAC*AGPVLF
Trigger: GAAGAGGACCGGGCCAGCCCAGCAGGCAGTGATCAT...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCTGGTACACAGGTGGTaGACGAGGAGCCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLLVHRW*TRSRKR
Trigger: GCGCTTCCGGCTCCTCGTCCACCACCTGTGTACCAG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGTGGCTGGTACACAGGTaGTGGACGAGGAGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQWLVHR*WTRSRK
Trigger: CTTCCGGCTCCTCGTCCACCACCTGTGTACCAGCCA...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTGGCTGGTACACAGGTaGTGGACGAGGAGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAWLVHR*WTRSRK
Trigger: CTTCCGGCTCCTCGTCCACCACCTGTGTACCAGCCA...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCCGGTGTTGTAGCAGGTaGACTCCTGGTCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCRCCSR*TPGHSP
Trigger: GGGACTGTGACCAGGAGTCCACCTGCTACAACACCG...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGAGGCTGCTCCAATGTaGGCCGTGGTGTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAEAAPM*AVVCGA
Trigger: GGCTCCACACACCACGGCCCACATTGGAGCAGCCTC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGAAGATGGAGCCTGACTaGGCTTTGGGGAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQKMEPD*ALGSPQ
Trigger: CTGGGGGCTCCCCAAAGCCCAGTCAGGCTCCATCTT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGCCTGGGCAAGGGGCTaGCAGGCGGATGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLAWARG*QADVLG
Trigger: TCCAAGCACATCCGCCTGCCAGCCCCTTGCCCAGGC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATGCTGGGTTCCAGGCCTaGGCAAGGGGCTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDAGFQA*ARGWQA
Trigger: CGCCTGCCAGCCCCTTGCCCAGGCCTGGAACCCAGC...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGGACATAGGCGGGGCTaGGAGCCGCTGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSGHRRG*EPLSRQ
Trigger: CTGCCTGGACAGCGGCTCCCAGCCCCGCCTATGTCC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGACGCCAGGACTGCATaGGGGCCGAGGGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLDARTA*GPRALA
Trigger: AGCCAGGGCCCTCGGCCCCCATGCAGTCCTGGCGTC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACCCTCCAGGGAGCCCTaGATCAGCAGGGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAPSREP*ISREMV
Trigger: CACCATCTCCCTGCTGATCCAGGGCTCCCTGGAGGG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCACTCAGCGGGAGGCTaGAATTCTCAGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAHSAGG*NSQGGS
Trigger: GCTTCCTCCCTGAGAATTTCAGCCTCCCGCTGAGTG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGCCGTTCTCCCGAGGCTaGGAGCAGATGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGPFSRG*EQMKGL
Trigger: GAGCCCCTTCATCTGCTCTCAGCCTCGGGAGAACGG...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTAGACAGACGACGGTGTaGACGAGAGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACARQTTV*TRAAAT
Trigger: AGTGGCAGCTGCTCTCGTTCACACCGTCGTCTGTCT...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACAGGGTGGTGGCAGCATaGGCCAGCGGGACCCATTGG +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHRVVAA*ASGTHW
Trigger: CCAATGGGTCCCGCTGGCTCATGCTGCCACCACCCT...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCAGGGTGGTGGCAGCATaGGCCAGCGGGACCCATTGG +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSRVVAA*ASGTHW
Trigger: CCAATGGGTCCCGCTGGCTCATGCTGCCACCACCCT...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTATTTCCAGGGCGTTGGTaGGCTCCTCGGGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLFPGRW*APRAAR
Trigger: ACGAGCAGCCCGAGGAGCTCACCAACGCCCTGGAAA...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCTTTCCAGGGCGTTGGTaGGCTCCTCGGGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAFPGRW*APRAAR
Trigger: ACGAGCAGCCCGAGGAGCTCACCAACGCCCTGGAAA...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTTCCAGGGCGTTGGTaGGCTCCTCGGGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWFPGRW*APRAAR
Trigger: ACGAGCAGCCCGAGGAGCTCACCAACGCCCTGGAAA...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGAAGAGCAGCCCAAGATaGCGTGGAGGCCATGCCGTT +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQKSSPR*RGGHAV
Trigger: AACGGCATGGCCTCCACGTCATCTTGGGCTGCTCTT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTTCATCCTGGCTCTCCTaGCCCTCTCCAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLSSWLS*PSPDSR
Trigger: CCTGCTGTCTGGAGAGGGTCAGGAGAGCCAGGATGA...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGAACCCCTGTGGCGATaGTCACTGCCTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGEPLWR*SLPAGL
Trigger: CAGCCCAGCAGGCAGTGATCATCGCCACAGGGGTTC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGAACCCCTGTGGCGATaGTCACTGCCTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWEPLWR*SLPAGL
Trigger: CAGCCCAGCAGGCAGTGATCATCGCCACAGGGGTTC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGAACCCCTGTGGCGATaGTCACTGCCTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAEPLWR*SLPAGL
Trigger: CAGCCCAGCAGGCAGTGATCATCGCCACAGGGGTTC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACCGCTGGCTGTTCGATaGAGCCCGGGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLPLAVR*SPGTCR
Trigger: CCTGCAGGTGCCCGGGCTTCATCGAACAGCCAGCGG...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGAGTGGGGCTGCGGGCTaGGTGTCTTCATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQSGAAG*VSSSLA
Trigger: AGCTAGAGATGAAGACACTCAGCCCGCAGCCCCACT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGACAAGATGGAGCCTaGCTGGGCTTTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLRQDGA*LGFGEP
Trigger: GGGCTCCCCAAAGCCCAGTCAGGCTCCATCTTGTCT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCTTGCTGCCTGGCGCCTaGGAGGCCTCTGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSLLPGA*EASEPE
Trigger: CTCTGGCTCAGAGGCCTCTCAGGCGCCAGGCAGCAA...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGGGCCCACTCACCTCTaGCAACAGGTCTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGGPTHL*QQVFPA
Trigger: AGCCGGGAAGACCTGTTGTCAGAGGTGAGTGGGCCC...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGGGCCCACTCACCTCTaGCAACAGGTCTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHGPTHL*QQVFPA
Trigger: AGCCGGGAAGACCTGTTGTCAGAGGTGAGTGGGCCC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGGGCCCACTCACCTCTaGCAACAGGTCTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGGPTHL*QQVFPA
Trigger: AGCCGGGAAGACCTGTTGTCAGAGGTGAGTGGGCCC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCGCTGTCCAGGCAGCTaGCAGCGATGGAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHRCPGS*QRWSVS
Trigger: GGAGACACTCCATCGCTGTCAGCTGCCTGGACAGCG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGCGCTGTCCAGGCAGCTaGCAGCGATGGAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGRCPGS*QRWSVS
Trigger: GGAGACACTCCATCGCTGTCAGCTGCCTGGACAGCG...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTTCTTTGGGGAGGGTaGGGCAGCCGTGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAFLWGG*GSRAVK
Trigger: CTTGACAGCACGGCTGCCTCACCCTCCCCAAAGAAA...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCCTCGGAGTCCGCGCTaGCCGGGTCCTTTTCCGTCG +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDPRSPR*PGPFPS
Trigger: CGACGGAAAAGGACCCGGGCAGCGCGGACTCCGAGG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGGGTTACAGACCGTaGGGAGACACCAGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHTGYRP*GDTSSA
Trigger: CGCGGAGCTGGTGTCTCCGCACGGTCTGTAACCCGT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGACGGGTTACAGACCGTaGGGAGACACCAGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWTGYRP*GDTSSA
Trigger: CGCGGAGCTGGTGTCTCCGCACGGTCTGTAACCCGT...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGTGTGGGCACGCTCCTaGAGGATCGCATGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAVWARS*RIACRS
Trigger: AGAACGGCATGCGATCCTGCAGGAGCGTGCCCACAC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGCCTGCGGGCTGCTTTaGGGAGGATGTACACCAGGT +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAACGLL*GGCTPG
Trigger: ACCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACAGACCTGGGCCAGCCTaGGGGCTGCTTTGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHRPGPA*GLLCGG
Trigger: TCCTCCGCAAAGCAGCCCGCAGGCTGGCCCAGGTCT...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCACAGTCCTGCCAGATaGCTCCGATGGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAHSPAR*LRWGPG
Trigger: CCCAGGTCCCCATCGGAGGCATCTGGCAGGACTGTG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGGACTCTGGCTCCCCTaGTCCTGTCCGGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAGLWLP*SCPGTV
Trigger: TACTGTGCCCGGACAGGAGCAGGGGAGCCAGAGTCC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACACAGAACTAGGCTCTaGATCTGGGCCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAHRTRL*IWAQAR
Trigger: CCGAGCCTGGGCCCAGATGCAGAGCCTAGTTCTGTG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCACAGAACTAGGCTCTaGATCTGGGCCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLHRTRL*IWAQAR
Trigger: CCGAGCCTGGGCCCAGATGCAGAGCCTAGTTCTGTG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGACAGGCCACCTCCCTaGTGGCCCACAATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGDRPPP*WPTISH
Trigger: GTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCTGTC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGACAGGCCACCTCCCTaGTGGCCCACAATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWDRPPP*WPTISH
Trigger: GTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCTGTC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACCACGAGCTGCCGCTaGAGTGCCGGCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVTTSCR*SAGRKR
Trigger: TCGCTTCCTGCCGGCACTGCAGCGGCAGCTCGTGGT...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCACCACGAGCTGCCGCTaGAGTGCCGGCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSTTSCR*SAGRKR
Trigger: TCGCTTCCTGCCGGCACTGCAGCGGCAGCTCGTGGT...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCTTCCCCCACACCTGTaGTGGAGCTCTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLLPPHL*WSSWAV
Trigger: CACTGCCCAAGAGCTCCAGCACAGGTGTGGGGGAAG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGCGCTCCAGGGACTGTaGGGGGAGCTTCGGGCACTT +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVALQGL*GELRAL
Trigger: AAGTGCCCGAAGCTCCCCGCACAGTCCCTGGAGCGC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGGTCCAGCTGCTTGCTaGGCTCCAGGGACTGTGCGG +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSGPAAC*APGTVR
Trigger: CCGCACAGTCCCTGGAGCGCAGCAAGCAGCTGGACC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGGTCCAGCTGCTTGCTaGGCTCCAGGGACTGTGCGG +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVGPAAC*APGTVR
Trigger: CCGCACAGTCCCTGGAGCGCAGCAAGCAGCTGGACC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGCCTGCTGGTCCAGCTaGTTGCTGCGCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHACWSS*LLRSRD
Trigger: GTCCCTGGAGCGCAGCAAGCAGCTGGACCAGCAGGC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGCCTGCTGGTCCAGCTaGTTGCTGCGCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVACWSS*LLRSRD
Trigger: GTCCCTGGAGCGCAGCAAGCAGCTGGACCAGCAGGC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCTCCGGCTGGAGCGCCTaGTGGTCCAGCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSSGWSA*WSSCLL
Trigger: CAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCCGGA...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGCGATGATCACTGCCTaGTGGGCTGGCCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSAMITA*WAGPVL
Trigger: GAGGACCGGGCCAGCCCAGCAGGCAGTGATCATCGC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGCAGCACCCTCAGCATaGCGAGAATCTTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLAAPSA*RESWCR
Trigger: GCGGCACCAAGATTCTCGGCATGCTGAGGGTGCTGC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGCACCGTGTCCAGCAGTaGCCGCATGCCCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGHRVQQ*PHAHSH
Trigger: ATGGCTGTGGGCATGCGGGCACTGCTGGACACGGTG...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGGTACCATCGTGGGGTaGTCAAGGGAGAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCGTIVG*SREKPE
Trigger: TTCAGGCTTCTCCCTTGAGCACCCCACGATGGTACC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACCTTCCCCGCGCAGTGTaGGCACGCTCCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHLPRAV*ARSCRI
Trigger: GATCCTGCAGGAGCGTGCCCACACTGCGCGGGGAAG...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCCCACCACGGGCCACTaGGCTGCTGAGCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAPTTGH*AAEQPS
Trigger: GCTGGGTTGCTCAGCAGCCCAGTGGCCCGTGGTGGG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCAGCTGCCACTGGGCTaGGGCTCCTGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFQLPLG*GSCPPR
Trigger: CCGTGGTGGGCAGGAGCCCCAGCCCAGTGGCAGCTG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGAGAGCAGCTGCCACTaGGCTGGGGCTCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLESSCH*AGAPAH
Trigger: GTGGGCAGGAGCCCCAGCCCAGTGGCAGCTGCTCTC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGAGAGCAGCTGCCACTaGGCTGGGGCTCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAESSCH*AGAPAH
Trigger: GTGGGCAGGAGCCCCAGCCCAGTGGCAGCTGCTCTC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTTGGTGGTGGACCAGGTaGTGGACAGACAGACGACGG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLWWWTR*WTDRRR
Trigger: CCGTCGTCTGTCTGTCCACCACCTGGTCCACCACCA...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCCTGTCCTGGATCTCTaGGCTGGCCCGGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHPVLDL*AGPGNS
Trigger: AGAGTTCCCCGGGCCAGCCCAGAGATCCAGGACAGG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGCCTGTCCTGGATCTCTaGGCTGGCCCGGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGPVLDL*AGPGNS
Trigger: AGAGTTCCCCGGGCCAGCCCAGAGATCCAGGACAGG...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTAGTGGGGGTAGAGGGTaGTGGCAGCATGAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGSGGRG*WQHEPA
Trigger: CGCTGGCTCATGCTGCCACCACCCTCTACCCCCACT...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAAGTGGGGGTAGAGGGTaGTGGCAGCATGAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLSGGRG*WQHEPA
Trigger: CGCTGGCTCATGCTGCCACCACCCTCTACCCCCACT...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACAGTGGGGGTAGAGGGTaGTGGCAGCATGAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHSGGRG*WQHEPA
Trigger: CGCTGGCTCATGCTGCCACCACCCTCTACCCCCACT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGAGTGGGGGTAGAGGGTaGTGGCAGCATGAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWSGGRG*WQHEPA
Trigger: CGCTGGCTCATGCTGCCACCACCCTCTACCCCCACT...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGCGCCTGGCAACGGACTaGCTCCAAGTGGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGRLATD*LQVAVS
Trigger: GCTGACTGCCACTTGGAGCCAGTCCGTTGCCAGGCG...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGGCCGTCGCCGTCTGTaGGGATCCCGGAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFGRRRL*GSRRSL
Trigger: CAGCGACCTCCGGGATCCCCACAGACGGCGACGGCC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGGCCGTCGCCGTCTGTaGGGATCCCGGAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESGRRRL*GSRRSL
Trigger: CAGCGACCTCCGGGATCCCCACAGACGGCGACGGCC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGAGGCCACCTCCCTGCTaGCCCACAATCTCCCACACG +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWRPPPC*PTISHT
Trigger: CGTGTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCT...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAAGGCCACCTCCCTGCTaGCCCACAATCTCCCACACG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLRPPPC*PTISHT
Trigger: CGTGTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCT...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACAGGCCACCTCCCTGCTaGCCCACAATCTCCCACACG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHRPPPC*PTISHT
Trigger: CGTGTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGAGGCCACCTCCCTGCTaGCCCACAATCTCCCACACG +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGRPPPC*PTISHT
Trigger: CGTGTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCT...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATGGCTGGAGCGCCTGCTaGTCCAGCTGCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDGWSAC*SSCLLR
Trigger: GCGCAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCC...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGGCTGGAGCGCCTGCTaGTCCAGCTGCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAGWSAC*SSCLLR
Trigger: GCGCAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACCAGGCTGTTCCGGCTaGAGCGCCTGCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLPGCSG*SACWSS
Trigger: GCTGGACCAGCAGGCGCTCCAGCCGGAACAGCCTGG...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTATGATCACTGCCTGCTaGGCTGGCCCGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLMITAC*AGPVLF
Trigger: GAAGAGGACCGGGCCAGCCCAGCAGGCAGTGATCAT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAATCATCCCCATCCAGTaGGGGGTCATCAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAIIPIQ*GVISPQ
Trigger: CTGCGGGCTGATGACCCCCCACTGGATGGGGATGAT...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGGACCCACCGGTAACTaGCCTCAGCACAGTCGGACT +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLGPTGN*PQHSRT
Trigger: AGTCCGACTGTGCTGAGGCCAGTTACCGGTGGGTCC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTACTGGTACACAGGTGGTaGACGAGGAGCCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLLVHRW*TRSRKR
Trigger: GCGCTTCCGGCTCCTCGTCCACCACCTGTGTACCAG...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCTGGTACACAGGTGGTaGACGAGGAGCCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTALVHRW*TRSRKR
Trigger: GCGCTTCCGGCTCCTCGTCCACCACCTGTGTACCAG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCGGTGTTGTAGCAGGTaGACTCCTGGTCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACARCCSR*TPGHSP
Trigger: GGGACTGTGACCAGGAGTCCACCTGCTACAACACCG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGCGGTGTTGTAGCAGGTaGACTCCTGGTCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQRCCSR*TPGHSP
Trigger: GGGACTGTGACCAGGAGTCCACCTGCTACAACACCG...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGAGGCTGCTCCAATGTaGGCCGTGGTGTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAEAAPM*AVVCGA
Trigger: GGCTCCACACACCACGGCCCACATTGGAGCAGCCTC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGCCTGGGCAAGGGGCTaGCAGGCGGATGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVAWARG*QADVLG
Trigger: TCCAAGCACATCCGCCTGCCAGCCCCTTGCCCAGGC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGCTGGGTTCCAGGCCTaGGCAAGGGGCTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESAGFQA*ARGWQA
Trigger: CGCCTGCCAGCCCCTTGCCCAGGCCTGGAACCCAGC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGGACATAGGCGGGGCTaGGAGCCGCTGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAGHRRG*EPLSRQ
Trigger: CTGCCTGGACAGCGGCTCCCAGCCCCGCCTATGTCC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGACGCCAGGACTGCATaGGGGCCGAGGGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESDARTA*GPRALA
Trigger: AGCCAGGGCCCTCGGCCCCCATGCAGTCCTGGCGTC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTATGCTGTCAAGGGGGCTaGAGGCCGAGGGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLCCQGG*RPRDPS
Trigger: CGAAGGATCCCTCGGCCTCCAGCCCCCTTGACAGCA...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACTGCTGTCAAGGGGGCTaGAGGCCGAGGGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHCCQGG*RPRDPS
Trigger: CGAAGGATCCCTCGGCCTCCAGCCCCCTTGACAGCA...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGACAGCTGTCTGTCCGTaGGGTGCTCAAGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQTAVCP*GAQGRS
Trigger: GCTTCTCCCTTGAGCACCCCACGGACAGACAGCTGT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAGGGCTGGCCCCCTaGGCCTGCCAGCTCGTCCAT +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDRGLAP*ACQLVH
Trigger: ATGGACGAGCTGGCAGGCCCAGGGGGCCAGCCCTCT...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGCCCTGCCCACAGCTaGACACCAACGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLSPAHS*TPTMPK
Trigger: CTTTGGCATCGTTGGTGTTCAGCTGTGGGCAGGGCT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTCCGTTCTCCCGAGGCTaGGAGCAGATGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVPFSRG*EQMKGL
Trigger: GAGCCCCTTCATCTGCTCTCAGCCTCGGGAGAACGG...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGCTTGTGCATGGAGCTaGAGGGCCCAGGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAACAWS*RAQVGC
Trigger: ACATCCCACCTGGGCCCTTCAGCTCCATGCACAAGC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCCACAGCCTCACTGTCTaGGTCAGGCATTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCHSLTV*VRHFMV
Trigger: GACCATGAAATGCCTGACTCAGACAGTGAGGCTGTG...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCGGAGGTCGCTGTGCTaGGCGTCCTGTGTGAACTCA +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGRRSLC*ASCVNS
Trigger: TGAGTTCACACAGGACGCTCAGCACAGCGACCTCCG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGAATCTGAAAGACAGTaGCAATGGCCCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCESERQ*QWPRAG
Trigger: CCCTGCTCTGGGCCATTGTCACTGTCTTTCAGATTC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAAGAGCAGCCCAAGATaGCGTGGAGGCCATGCCGTT +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLKSSPR*RGGHAV
Trigger: AACGGCATGGCCTCCACGTCATCTTGGGCTGCTCTT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACTCATCCTGGCTCTCCTaGCCCTCTCCAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHSSWLS*PSPDSR
Trigger: CCTGCTGTCTGGAGAGGGTCAGGAGAGCCAGGATGA...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCTCATCCTGGCTCTCCTaGCCCTCTCCAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTASSWLS*PSPDSR
Trigger: CCTGCTGTCTGGAGAGGGTCAGGAGAGCCAGGATGA...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGGCCCGGTCCTCTTCTaGACTCTCCTCCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGGPVLF*TLLLIL
Trigger: CAGGATGAGGAGGAGAGTTCAGAAGAGGACCGGGCC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGGCCCGGTCCTCTTCTaGACTCTCCTCCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAGPVLF*TLLLIL
Trigger: CAGGATGAGGAGGAGAGTTCAGAAGAGGACCGGGCC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGCGGGCCAAACGCCCTaGAGCCGACTTGCCATTACA +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLAGQTP*SRLAIT
Trigger: TGTAATGGCAAGTCGGCTTCAGGGCGTTTGGCCCGC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGCGGGCCAAACGCCCTaGAGCCGACTTGCCATTACA +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWAGQTP*SRLAIT
Trigger: TGTAATGGCAAGTCGGCTTCAGGGCGTTTGGCCCGC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTAAGGGTTGTGGTTCATaGTGGGCTGCTGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAKGCGS*WAAGPL
Trigger: GAGTGGACCAGCAGCCCATCATGAACCACAACCCTT...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGGGCAGTGAAGCATTaGCCTCAATCTCTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCWAVKH*PQSLPA
Trigger: CGCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCA...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGTGGGGCTGCGGGCTaGGTGTCTTCATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLSGAAG*VSSSLA
Trigger: AGCTAGAGATGAAGACACTCAGCCCGCAGCCCCACT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCTCAAGGGAGAAGCCTaGAGAGGCTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACALKGEA*RGCSNV
Trigger: CACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGAGACAAGATGGAGCCTaGCTGGGCTTTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWRQDGA*LGFGEP
Trigger: GGGCTCCCCAAAGCCCAGTCAGGCTCCATCTTGTCT...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGCTGCCTGGCGCCTaGGAGGCCTCTGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRALLPGA*EASEPE
Trigger: CTCTGGCTCAGAGGCCTCTCAGGCGCCAGGCAGCAA...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGGGCAGGAGGTCTCCTaGAATCCAGCTCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHGQEVS*NPAQLR
Trigger: ACGGAGCTGAGCTGGATTTCAGGAGACCTCCTGCCC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGGGCAGGAGGTCTCCTaGAATCCAGCTCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLGQEVS*NPAQLR
Trigger: ACGGAGCTGAGCTGGATTTCAGGAGACCTCCTGCCC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGGGCAGGAGGTCTCCTaGAATCCAGCTCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAGQEVS*NPAQLR
Trigger: ACGGAGCTGAGCTGGATTTCAGGAGACCTCCTGCCC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGACAGGGGTTCTTCCTaGCTGCTGGGCAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHDRGSS*LLGRRS
Trigger: AGACCTCCTGCCCAGCAGTCAGGAAGAACCCCTGTC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGACAGGGGTTCTTCCTaGCTGCTGGGCAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWDRGSS*LLGRRS
Trigger: AGACCTCCTGCCCAGCAGTCAGGAAGAACCCCTGTC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACCGCTGTCCAGGCAGCTaGCAGCGATGGAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHRCPGS*QRWSVS
Trigger: GGAGACACTCCATCGCTGTCAGCTGCCTGGACAGCG...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCCCTCGGAGTCCGCGCTaGCCGGGTCCTTTTCCGTCG +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLPRSPR*PGPFPS
Trigger: CGACGGAAAAGGACCCGGGCAGCGCGGACTCCGAGG...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGTGTGGGCACGCTCCTaGAGGATCGCATGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAVWARS*RIACRS
Trigger: AGAACGGCATGCGATCCTGCAGGAGCGTGCCCACAC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGTGTGGGCACGCTCCTaGAGGATCGCATGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGVWARS*RIACRS
Trigger: AGAACGGCATGCGATCCTGCAGGAGCGTGCCCACAC...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGGGGTTGTGCTCGCCTaGAGAGCAGTTGGTATAGTA +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCGVVLA*RAVGIV
Trigger: TACTATACCAACTGCTCTGCAGGCGAGCACAACCCC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGCCTGCGGGCTGCTTTaGGGAGGATGTACACCAGGT +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLACGLL*GGCTPG
Trigger: ACCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTGCGGGCTGCTTTaGGGAGGATGTACACCAGGT +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGACGLL*GGCTPG
Trigger: ACCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGC...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGCCTGCGGGCTGCTTTaGGGAGGATGTACACCAGGT +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAACGLL*GGCTPG
Trigger: ACCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGACCTGGGCCAGCCTaGGGGCTGCTTTGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDRPGPA*GLLCGG
Trigger: TCCTCCGCAAAGCAGCCCGCAGGCTGGCCCAGGTCT...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCACTACCCACAGTCCTaGCAGATGCCTCCGATGGGG +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAHYPQS*QMPPMG
Trigger: CCCCATCGGAGGCATCTGGCAGGACTGTGGGTAGTG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGCACTACCCACAGTCCTaGCAGATGCCTCCGATGGGG +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWHYPQS*QMPPMG
Trigger: CCCCATCGGAGGCATCTGGCAGGACTGTGGGTAGTG...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCACTACCCACAGTCCTaGCAGATGCCTCCGATGGGG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHHYPQS*QMPPMG
Trigger: CCCCATCGGAGGCATCTGGCAGGACTGTGGGTAGTG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTACAGGCTCCACTGTCTaGCTTGGAGCAAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLTGSTV*LGARAG
Trigger: TCCAGCCCTTGCTCCAAGGCAGACAGTGGAGCCTGT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGCACAGAACTAGGCTCTaGATCTGGGCCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWHRTRL*IWAQAR
Trigger: CCGAGCCTGGGCCCAGATGCAGAGCCTAGTTCTGTG...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGACAGGCCACCTCCCTaGTGGCCCACAATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHDRPPP*WPTISH
Trigger: GTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCTGTC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGACAGGCCACCTCCCTaGTGGCCCACAATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVDRPPP*WPTISH
Trigger: GTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCTGTC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCTTCCCCCACACCTGTaGTGGAGCTCTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHLPPHL*WSSWAV
Trigger: CACTGCCCAAGAGCTCCAGCACAGGTGTGGGGGAAG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCTTCCCCCACACCTGTaGTGGAGCTCTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGLPPHL*WSSWAV
Trigger: CACTGCCCAAGAGCTCCAGCACAGGTGTGGGGGAAG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGCGCTCCAGGGACTGTaGGGGGAGCTTCGGGCACTT +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAALQGL*GELRAL
Trigger: AAGTGCCCGAAGCTCCCCGCACAGTCCCTGGAGCGC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATGCGCTCCAGGGACTGTaGGGGGAGCTTCGGGCACTT +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDALQGL*GELRAL
Trigger: AAGTGCCCGAAGCTCCCCGCACAGTCCCTGGAGCGC...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGCGCTCCAGGGACTGTaGGGGGAGCTTCGGGCACTT +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLALQGL*GELRAL
Trigger: AAGTGCCCGAAGCTCCCCGCACAGTCCCTGGAGCGC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGGTCCAGCTGCTTGCTaGGCTCCAGGGACTGTGCGG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAGPAAC*APGTVR
Trigger: CCGCACAGTCCCTGGAGCGCAGCAAGCAGCTGGACC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGCCTGCTGGTCCAGCTaGTTGCTGCGCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLACWSS*LLRSRD
Trigger: GTCCCTGGAGCGCAGCAAGCAGCTGGACCAGCAGGC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATCCGGCTGGAGCGCCTaGTGGTCCAGCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLSGWSA*WSSCLL
Trigger: CAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCCGGA...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTCCGGCTGGAGCGCCTaGTGGTCCAGCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRASGWSA*WSSCLL
Trigger: CAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCCGGA...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATGCGATGATCACTGCCTaGTGGGCTGGCCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDAMITA*WAGPVL
Trigger: GAGGACCGGGCCAGCCCAGCAGGCAGTGATCATCGC...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGTGGCGATGATCACTaGCTGCTGGGCTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHCGDDH*LLGWPG
Trigger: ACCGGGCCAGCCCAGCAGGCAGTGATCATCGCCACA...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGTGCCGAGAATCTTGGTaGCGCTGTCAGAGACCATGG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQCRESW*RCQRPW
Trigger: CCATGGTCTCTGACAGCGGCACCAAGATTCTCGGCA...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGCAGCACCCTCAGCATaGCGAGAATCTTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHAAPSA*RESWCR
Trigger: GCGGCACCAAGATTCTCGGCATGCTGAGGGTGCTGC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGCAGCACCCTCAGCATaGCGAGAATCTTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGAAPSA*RESWCR
Trigger: GCGGCACCAAGATTCTCGGCATGCTGAGGGTGCTGC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGTGGTTCATGATGGGCTaGTGGTCCACTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQWFMMG*WSTPTA
Trigger: TGCTGTGGGAGTGGACCAGCAGCCCATCATGAACCA...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTGGTTCATGATGGGCTaGTGGTCCACTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAWFMMG*WSTPTA
Trigger: TGCTGTGGGAGTGGACCAGCAGCCCATCATGAACCA...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTGCCGATTTCCTCTaGCTGGAAACCCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCFADFL*LETLHE
Trigger: CTCGTGGAGGGTTTCCAGGCAGAGGAAATCGGCAAA...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAAGGATCCGGCAGCGTTaGGAGTCACAGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWARIRQR*ESQAMS
Trigger: GGACATTGCCTGTGACTCCCAACGCTGCCGGATCCT...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGTCCAGACCGCAGGGTaGACCACCACCGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFVQTAG*TTTAFP
Trigger: GGGGAAGGCGGTGGTGGTCCACCCTGCGGTCTGGAC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGTCCAGACCGCAGGGTaGACCACCACCGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLVQTAG*TTTAFP
Trigger: GGGGAAGGCGGTGGTGGTCCACCCTGCGGTCTGGAC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCCCCACCACGGGCCACTaGGCTGCTGAGCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLPTTGH*AAEQPS
Trigger: GCTGGGTTGCTCAGCAGCCCAGTGGCCCGTGGTGGG...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTGGTGGTGGACCAGGTaGTGGACAGACAGACGACGG +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWWWWTR*WTDRRR
Trigger: CCGTCGTCTGTCTGTCCACCACCTGGTCCACCACCA...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACTGGTGGTGGACCAGGTaGTGGACAGACAGACGACGG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHWWWTR*WTDRRR
Trigger: CCGTCGTCTGTCTGTCCACCACCTGGTCCACCACCA...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCTGGTGGTGGACCAGGTaGTGGACAGACAGACGACGG +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAWWWTR*WTDRRR
Trigger: CCGTCGTCTGTCTGTCCACCACCTGGTCCACCACCA...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCCCTGTCCTGGATCTCTaGGCTGGCCCGGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSPVLDL*AGPGNS
Trigger: AGAGTTCCCCGGGCCAGCCCAGAGATCCAGGACAGG...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTCCTGTCCTGGATCTCTaGGCTGGCCCGGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVPVLDL*AGPGNS
Trigger: AGAGTTCCCCGGGCCAGCCCAGAGATCCAGGACAGG...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCTTGGCATCCCTGTCCTaGATCTCTGGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSLASLS*ISGLAR
Trigger: CCGGGCCAGCCCAGAGATCCAGGACAGGGATGCCAA...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCAGCGGGACCCATTaGCATCCCTGTCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGASGTH*HPCPGS
Trigger: AGATCCAGGACAGGGATGCCAATGGGTCCCGCTGGC...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGCCAGCGGGACCCATTaGCATCCCTGTCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLASGTH*HPCPGS
Trigger: AGATCCAGGACAGGGATGCCAATGGGTCCCGCTGGC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGCCAGCGGGACCCATTaGCATCCCTGTCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWASGTH*HPCPGS
Trigger: AGATCCAGGACAGGGATGCCAATGGGTCCCGCTGGC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGGGGGTAGAGGGTGGTaGCAGCATGAGCCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAGGRGW*QHEPAG
Trigger: TCCCGCTGGCTCATGCTGCCACCACCCTCTACCCCC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTCGCCTGGCAACGGACTaGCTCCAAGTGGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVRLATD*LQVAVS
Trigger: GCTGACTGCCACTTGGAGCCAGTCCGTTGCCAGGCG...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCTCTGGTGGAGGGCTaGTATGCACAGTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCSLVEG*YAQWGI
Trigger: TATACCCCACTGTGCATACCAGCCCTCCACCAGAGA...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCATCCTTCAGCATCTCTaGTGGAGGGCTGGTATGCAC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCILQHL*WRAGMH
Trigger: GTGCATACCAGCCCTCCACCAGAGATGCTGAAGGAT...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAACTAGGCTCTGCATCTaGGCCCAGGCTCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLTRLCI*AQARPS
Trigger: CGACGGCCGAGCCTGGGCCCAGATGCAGAGCCTAGT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACAGGCCACCTCCCTGCTaGCCCACAATCTCCCACACG +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHRPPPC*PTISHT
Trigger: CGTGTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCT...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCTGACTCAGACTTGGTaGCATCTCCCTCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACALTQTW*HLPLPG
Trigger: TCCAGGCAGAGGGAGATGCCACCAAGTCTGAGTCAG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021234.15
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCAGGCTGTTCCGGCTaGAGCGCCTGCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESPGCSG*SACWSS
Trigger: GCTGGACCAGCAGGCGCTCCAGCCGGAACAGCCTGG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCCAGGCTGTTCCGGCTaGAGCGCCTGCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFPGCSG*SACWSS
Trigger: GCTGGACCAGCAGGCGCTCCAGCCGGAACAGCCTGG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCCTCCGCTCCCCGCTTaGGCTCCTACGCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDPPLPA*APTLQA
Trigger: AGCCTGAAGCGTAGGAGCCCAAGCGGGGAGCGGAGG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACCTCCGCTCCCCGCTTaGGCTCCTACGCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLPPLPA*APTLQA
Trigger: AGCCTGAAGCGTAGGAGCCCAAGCGGGGAGCGGAGG...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAATGATCACTGCCTGCTaGGCTGGCCCGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLMITAC*AGPVLF
Trigger: GAAGAGGACCGGGCCAGCCCAGCAGGCAGTGATCAT...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTATGATCACTGCCTGCTaGGCTGGCCCGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGMITAC*AGPVLF
Trigger: GAAGAGGACCGGGCCAGCCCAGCAGGCAGTGATCAT...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCATGATCACTGCCTGCTaGGCTGGCCCGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAMITAC*AGPVLF
Trigger: GAAGAGGACCGGGCCAGCCCAGCAGGCAGTGATCAT...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAATCATCCCCATCCAGTaGGGGGTCATCAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLIIPIQ*GVISPQ
Trigger: CTGCGGGCTGATGACCCCCCACTGGATGGGGATGAT...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGCATGCCGAGAATCTTaGTGCCGCTGTCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQACRES*CRCQRP
Trigger: TGGTCTCTGACAGCGGCACCAAGATTCTCGGCATGC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGGACCCACCGGTAACTaGCCTCAGCACAGTCGGACT +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAGPTGN*PQHSRT
Trigger: AGTCCGACTGTGCTGAGGCCAGTTACCGGTGGGTCC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGGACCCACCGGTAACTaGCCTCAGCACAGTCGGACT +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWGPTGN*PQHSRT
Trigger: AGTCCGACTGTGCTGAGGCCAGTTACCGGTGGGTCC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGGACCCACCGGTAACTaGCCTCAGCACAGTCGGACT +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGGPTGN*PQHSRT
Trigger: AGTCCGACTGTGCTGAGGCCAGTTACCGGTGGGTCC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTCATGATGGGCTGCTaGTCCACTCCCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAFMMGC*STPTAS
Trigger: GGATGCTGTGGGAGTGGACCAGCAGCCCATCATGAA...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCAGCATCCAAGGGTTGTaGTTCATGATGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCSIQGL*FMMGCW
Trigger: CCAGCAGCCCATCATGAACCACAACCCTTGGATGCT...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCCTGGTACACAGGTGGTaGACGAGGAGCCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSLVHRW*TRSRKR
Trigger: GCGCTTCCGGCTCCTCGTCCACCACCTGTGTACCAG...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCGGTGTTGTAGCAGGTaGACTCCTGGTCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLRCCSR*TPGHSP
Trigger: GGGACTGTGACCAGGAGTCCACCTGCTACAACACCG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGAGGCTGCTCCAATGTaGGCCGTGGTGTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSEAAPM*AVVCGA
Trigger: GGCTCCACACACCACGGCCCACATTGGAGCAGCCTC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGAGGCTGCTCCAATGTaGGCCGTGGTGTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHEAAPM*AVVCGA
Trigger: GGCTCCACACACCACGGCCCACATTGGAGCAGCCTC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAAAGATGGAGCCTGACTaGGCTTTGGGGAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLKMEPD*ALGSPQ
Trigger: CTGGGGGCTCCCCAAAGCCCAGTCAGGCTCCATCTT...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACAAGATGGAGCCTGACTaGGCTTTGGGGAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHKMEPD*ALGSPQ
Trigger: CTGGGGGCTCCCCAAAGCCCAGTCAGGCTCCATCTT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGTTCTTCCTGACTGCTaGGCAGGAGGTCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCVLPDC*AGGLLK
Trigger: TTTCAGGAGACCTCCTGCCCAGCAGTCAGGAAGAAC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTTGCTGTCAAGGGGGCTaGAGGCCGAGGGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVCCQGG*RPRDPS
Trigger: CGAAGGATCCCTCGGCCTCCAGCCCCCTTGACAGCA...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCTGCTGTCAAGGGGGCTaGAGGCCGAGGGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSCCQGG*RPRDPS
Trigger: CGAAGGATCCCTCGGCCTCCAGCCCCCTTGACAGCA...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACAGCCCTGCCCACAGCTaGACACCAACGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHSPAHS*TPTMPK
Trigger: CTTTGGCATCGTTGGTGTTCAGCTGTGGGCAGGGCT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCACTCAGCGGGAGGCTaGAATTCTCAGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAHSAGG*NSQGGS
Trigger: GCTTCCTCCCTGAGAATTTCAGCCTCCCGCTGAGTG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGCACTCAGCGGGAGGCTaGAATTCTCAGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGHSAGG*NSQGGS
Trigger: GCTTCCTCCCTGAGAATTTCAGCCTCCCGCTGAGTG...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACCGTTCTCCCGAGGCTaGGAGCAGATGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLPFSRG*EQMKGL
Trigger: GAGCCCCTTCATCTGCTCTCAGCCTCGGGAGAACGG...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCCGTTCTCCCGAGGCTaGGAGCAGATGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDPFSRG*EQMKGL
Trigger: GAGCCCCTTCATCTGCTCTCAGCCTCGGGAGAACGG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCCGTTCTCCCGAGGCTaGGAGCAGATGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAPFSRG*EQMKGL
Trigger: GAGCCCCTTCATCTGCTCTCAGCCTCGGGAGAACGG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGTACACCAGGTACTTaGGAAGCTCCTCATAGCAGC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCCTPGT*EAPHSS
Trigger: GCTGCTATGAGGAGCTTCTCAAGTACCTGGTGTACA...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACAGACAGACGACGGTGTaGACGAGAGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHRQTTV*TRAAAT
Trigger: AGTGGCAGCTGCTCTCGTTCACACCGTCGTCTGTCT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTAGGGTGGTGGCAGCATaGGCCAGCGGGACCCATTGG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFRVVAA*ASGTHW
Trigger: CCAATGGGTCCCGCTGGCTCATGCTGCCACCACCCT...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGCTTGTGCATGGAGCTaGAGGGCCCAGGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVACAWS*RAQVGC
Trigger: ACATCCCACCTGGGCCCTTCAGCTCCATGCACAAGC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGCACAGCCTCACTGTCTaGGTCAGGCATTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQHSLTV*VRHFMV
Trigger: GACCATGAAATGCCTGACTCAGACAGTGAGGCTGTG...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTAAGAGCAGCCCAAGATaGCGTGGAGGCCATGCCGTT +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGKSSPR*RGGHAV
Trigger: AACGGCATGGCCTCCACGTCATCTTGGGCTGCTCTT...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAAAGAGCAGCCCAAGATaGCGTGGAGGCCATGCCGTT +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLKSSPR*RGGHAV
Trigger: AACGGCATGGCCTCCACGTCATCTTGGGCTGCTCTT...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACAAGAGCAGCCCAAGATaGCGTGGAGGCCATGCCGTT +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHKSSPR*RGGHAV
Trigger: AACGGCATGGCCTCCACGTCATCTTGGGCTGCTCTT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGGCCCGGTCCTCTTCTaGACTCTCCTCCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVGPVLF*TLLLIL
Trigger: CAGGATGAGGAGGAGAGTTCAGAAGAGGACCGGGCC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGCGGGCCAAACGCCCTaGAGCCGACTTGCCATTACA +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVAGQTP*SRLAIT
Trigger: TGTAATGGCAAGTCGGCTTCAGGGCGTTTGGCCCGC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTGGGTGATGATCCGGTaGCACAGGAGACGAAACCTT +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAWVMIR*HRRRNL
Trigger: AAGGTTTCGTCTCCTGTGTCACCGGATCATCACCCA...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCTGGTGTCCTCACCCTaGCACACGAAGAACTTCCCT +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLLVSSP*HTKNFP
Trigger: AGGGAAGTTCTTCGTGTGTCAGGGTGAGGACACCAG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACTGGTGTCCTCACCCTaGCACACGAAGAACTTCCCT +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWALVSSP*HTKNFP
Trigger: AGGGAAGTTCTTCGTGTGTCAGGGTGAGGACACCAG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAAGGGTTGTGGTTCATaGTGGGCTGCTGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLKGCGS*WAAGPL
Trigger: GAGTGGACCAGCAGCCCATCATGAACCACAACCCTT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTAGTAGATGGGTGAGATaGCGGTGTTGTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACASRWVR*RCCSRW
Trigger: CCACCTGCTACAACACCGTCATCTCACCCATCTACT...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCAGTGGGGCTGCGGGCTaGGTGTCTTCATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTASGAAG*VSSSLA
Trigger: AGCTAGAGATGAAGACACTCAGCCCGCAGCCCCACT...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGAGTGGGGCTGCGGGCTaGGTGTCTTCATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWSGAAG*VSSSLA
Trigger: AGCTAGAGATGAAGACACTCAGCCCGCAGCCCCACT...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTAGTGGGGCTGCGGGCTaGGTGTCTTCATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGSGAAG*VSSSLA
Trigger: AGCTAGAGATGAAGACACTCAGCCCGCAGCCCCACT...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCTCAAGGGAGAAGCCTaGAGAGGCTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLLKGEA*RGCSNV
Trigger: CACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGACAAGATGGAGCCTaGCTGGGCTTTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVRQDGA*LGFGEP
Trigger: GGGCTCCCCAAAGCCCAGTCAGGCTCCATCTTGTCT...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCAGACAAGATGGAGCCTaGCTGGGCTTTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSRQDGA*LGFGEP
Trigger: GGGCTCCCCAAAGCCCAGTCAGGCTCCATCTTGTCT...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCTTGCTGCCTGGCGCCTaGGAGGCCTCTGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESLLPGA*EASEPE
Trigger: CTCTGGCTCAGAGGCCTCTCAGGCGCCAGGCAGCAA...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGGGCAGGAGGTCTCCTaGAATCCAGCTCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHGQEVS*NPAQLR
Trigger: ACGGAGCTGAGCTGGATTTCAGGAGACCTCCTGCCC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCGCTGTCCAGGCAGCTaGCAGCGATGGAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDRCPGS*QRWSVS
Trigger: GGAGACACTCCATCGCTGTCAGCTGCCTGGACAGCG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGTTTCTTTGGGGAGGGTaGGGCAGCCGTGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGFLWGG*GSRAVK
Trigger: CTTGACAGCACGGCTGCCTCACCCTCCCCAAAGAAA...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGACAGGTCGTTGAGCTaGGTGAAGCTCCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHDRSLS*VKLRGC
Trigger: ACAGCCCCGGAGCTTCACGCAGCTCAACGACCTGTC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGACAGGTCGTTGAGCTaGGTGAAGCTCCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVDRSLS*VKLRGC
Trigger: ACAGCCCCGGAGCTTCACGCAGCTCAACGACCTGTC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCACGGGTTACAGACCGTaGGGAGACACCAGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRATGYRP*GDTSSA
Trigger: CGCGGAGCTGGTGTCTCCGCACGGTCTGTAACCCGT...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGGGGTTGTGCTCGCCTaGAGAGCAGTTGGTATAGTA +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQGVVLA*RAVGIV
Trigger: TACTATACCAACTGCTCTGCAGGCGAGCACAACCCC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGCCTGCGGGCTGCTTTaGGGAGGATGTACACCAGGT +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHACGLL*GGCTPG
Trigger: ACCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGGCCAGCCTGCGGGCTaGTTTGCGGAGGATGTACAC +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAGQPAG*FAEDVH
Trigger: GTGTACATCCTCCGCAAAGCAGCCCGCAGGCTGGCC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGGCCAGCCTGCGGGCTaGTTTGCGGAGGATGTACAC +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLGQPAG*FAEDVH
Trigger: GTGTACATCCTCCGCAAAGCAGCCCGCAGGCTGGCC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATGGCCAGCCTGCGGGCTaGTTTGCGGAGGATGTACAC +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDGQPAG*FAEDVH
Trigger: GTGTACATCCTCCGCAAAGCAGCCCGCAGGCTGGCC...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCAGACCTGGGCCAGCCTaGGGGCTGCTTTGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLRPGPA*GLLCGG
Trigger: TCCTCCGCAAAGCAGCCCGCAGGCTGGCCCAGGTCT...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGTGAACGAGAGCAGCTaGCACTGGGCTGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLVNESS*HWAGAP
Trigger: AGGAGCCCCAGCCCAGTGGCAGCTGCTCTCGTTCAC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCACAGTCCTGCCAGATaGCTCCGATGGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAHSPAR*LRWGPG
Trigger: CCCAGGTCCCCATCGGAGGCATCTGGCAGGACTGTG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACACAGTCCTGCCAGATaGCTCCGATGGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLHSPAR*LRWGPG
Trigger: CCCAGGTCCCCATCGGAGGCATCTGGCAGGACTGTG...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTCACTACCCACAGTCCTaGCAGATGCCTCCGATGGGG +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVHYPQS*QMPPMG
Trigger: CCCCATCGGAGGCATCTGGCAGGACTGTGGGTAGTG...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGGTGGAGGGCTGGTATaGACAGTGGGGTATACCTTC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLGGGLV*TVGYTF
Trigger: GAAGGTATACCCCACTGTGCATACCAGCCCTCCACC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGACAGGCTCCACTGTCTaGCTTGGAGCAAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWTGSTV*LGARAG
Trigger: TCCAGCCCTTGCTCCAAGGCAGACAGTGGAGCCTGT...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACCACAGAACTAGGCTCTaGATCTGGGCCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHHRTRL*IWAQAR
Trigger: CCGAGCCTGGGCCCAGATGCAGAGCCTAGTTCTGTG...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCACCACGAGCTGCCGCTaGAGTGCCGGCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESTTSCR*SAGRKR
Trigger: TCGCTTCCTGCCGGCACTGCAGCGGCAGCTCGTGGT...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCCTTCCCCCACACCTGTaGTGGAGCTCTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSLPPHL*WSSWAV
Trigger: CACTGCCCAAGAGCTCCAGCACAGGTGTGGGGGAAG...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGGTCCAGCTGCTTGCTaGGCTCCAGGGACTGTGCGG +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLGPAAC*APGTVR
Trigger: CCGCACAGTCCCTGGAGCGCAGCAAGCAGCTGGACC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGCCTGCTGGTCCAGCTaGTTGCTGCGCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESACWSS*LLRSRD
Trigger: GTCCCTGGAGCGCAGCAAGCAGCTGGACCAGCAGGC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCTCCGGCTGGAGCGCCTaGTGGTCCAGCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLSGWSA*WSSCLL
Trigger: CAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCCGGA...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTGTGGCGATGATCACTaGCTGCTGGGCTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRACGDDH*LLGWPG
Trigger: ACCGGGCCAGCCCAGCAGGCAGTGATCATCGCCACA...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTAAAGCACCAGCCCAGTaGCACCACCTTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAKAPAQ*HHLHCH
Trigger: ATGACAGTGAAGGTGGTGGCACTGGGCTGGTGCTTT...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGCAGCACCCTCAGCATaGCGAGAATCTTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSAAPSA*RESWCR
Trigger: GCGGCACCAAGATTCTCGGCATGCTGAGGGTGCTGC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGCAGCACCCTCAGCATaGCGAGAATCTTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHAAPSA*RESWCR
Trigger: GCGGCACCAAGATTCTCGGCATGCTGAGGGTGCTGC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGCAGAGTAGTAGGGTTTaGACTGGGCTTCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQQSSRV*TGLLTQ
Trigger: CTGCGTCAGAAGCCCAGTGCAAACCCTACTACTCTG...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107789.8
ENSMUST00000107790.8
CDS-3UTR GCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCAGAGTAGTAGGGTTTaGACTGGGCTTCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAQSSRV*TGLLTQ
Trigger: CTGCGTCAGAAGCCCAGTGCAAACCCTACTACTCTG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107789.8
ENSMUST00000107790.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCACCGTGTCCAGCAGTaGCCGCATGCCCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAHRVQQ*PHAHSH
Trigger: ATGGCTGTGGGCATGCGGGCACTGCTGGACACGGTG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGATGCAGCTGGTGTCTaGTGGTTGGGAGTGAACAGA +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACADAAGV*WLGVNR
Trigger: TCTGTTCACTCCCAACCAGCAGACACCAGCTGCATC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGCTGGCAGGCGGATGTaGTTGGAGACTTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLAGRRM*LETLLW
Trigger: CCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCTGGCAGGCGGATGTaGTTGGAGACTTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGAGRRM*LETLLW
Trigger: CCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGC...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGCTGGCAGGCGGATGTaGTTGGAGACTTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAAGRRM*LETLLW
Trigger: CCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACAGGATCCGGCAGCGTTaGGAGTCACAGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHRIRQR*ESQAMS
Trigger: GGACATTGCCTGTGACTCCCAACGCTGCCGGATCCT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAAGGATCCGGCAGCGTTaGGAGTCACAGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLRIRQR*ESQAMS
Trigger: GGACATTGCCTGTGACTCCCAACGCTGCCGGATCCT...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCTTCCCCGCGCAGTGTaGGCACGCTCCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFLPRAV*ARSCRI
Trigger: GATCCTGCAGGAGCGTGCCCACACTGCGCGGGGAAG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCCTTCCCCGCGCAGTGTaGGCACGCTCCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLLPRAV*ARSCRI
Trigger: GATCCTGCAGGAGCGTGCCCACACTGCGCGGGGAAG...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGTCCAGTGTGATGACCTaGAAGATGGCGATCCAGGCA +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQSSVMT*KMAIQA
Trigger: TGCCTGGATCGCCATCTTCCAGGTCATCACACTGGA...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGACTCTCCCGTTGCTTaGTCTCAGAGAACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQDSPVA*SQRTVW
Trigger: CCACACAGTTCTCTGAGACCAAGCAACGGGAGAGTC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCAGCTGCCACTGGGCTaGGGCTCCTGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSQLPLG*GSCPPR
Trigger: CCGTGGTGGGCAGGAGCCCCAGCCCAGTGGCAGCTG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTGGCATCCCTGTCCTaGATCTCTGGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLLASLS*ISGLAR
Trigger: CCGGGCCAGCCCAGAGATCCAGGACAGGGATGCCAA...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATTTGGCATCCCTGTCCTaGATCTCTGGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDLASLS*ISGLAR
Trigger: CCGGGCCAGCCCAGAGATCCAGGACAGGGATGCCAA...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGGGGGTAGAGGGTGGTaGCAGCATGAGCCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFGGRGW*QHEPAG
Trigger: TCCCGCTGGCTCATGCTGCCACCACCCTCTACCCCC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGGGGGTAGAGGGTGGTaGCAGCATGAGCCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESGGRGW*QHEPAG
Trigger: TCCCGCTGGCTCATGCTGCCACCACCCTCTACCCCC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAAGTGGGGGTAGAGGGTaGTGGCAGCATGAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLSGGRG*WQHEPA
Trigger: CGCTGGCTCATGCTGCCACCACCCTCTACCCCCACT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCAGTGGGGGTAGAGGGTaGTGGCAGCATGAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRASGGRG*WQHEPA
Trigger: CGCTGGCTCATGCTGCCACCACCCTCTACCCCCACT...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACGCCTGGCAACGGACTaGCTCCAAGTGGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLRLATD*LQVAVS
Trigger: GCTGACTGCCACTTGGAGCCAGTCCGTTGCCAGGCG...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGGCTGGTATGCACAGTaGGGTATACCTTCCCACTAC +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAGWYAQ*GIPSHY
Trigger: GTAGTGGGAAGGTATACCCCACTGTGCATACCAGCC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGTCTCTGGTGGAGGGCTaGTATGCACAGTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQSLVEG*YAQWGI
Trigger: TATACCCCACTGTGCATACCAGCCCTCCACCAGAGA...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGGCCGTCGCCGTCTGTaGGGATCCCGGAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSGRRRL*GSRRSL
Trigger: CAGCGACCTCCGGGATCCCCACAGACGGCGACGGCC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTACTAGGCTCTGCATCTaGGCCCAGGCTCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFTRLCI*AQARPS
Trigger: CGACGGCCGAGCCTGGGCCCAGATGCAGAGCCTAGT...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACTAGGCTCTGCATCTaGGCCCAGGCTCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLTRLCI*AQARPS
Trigger: CGACGGCCGAGCCTGGGCCCAGATGCAGAGCCTAGT...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGGCCACCTCCCTGCTaGCCCACAATCTCCCACACG +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDRPPPC*PTISHT
Trigger: CGTGTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCT...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGCATCTCCCTCTGCCTaGAAACCCTCCACGAGAATG +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAASPSA*KPSTRM
Trigger: CATTCTCGTGGAGGGTTTCCAGGCAGAGGGAGATGC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATGATCACTGCCTGCTaGGCTGGCCCGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVMITAC*AGPVLF
Trigger: GAAGAGGACCGGGCCAGCCCAGCAGGCAGTGATCAT...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGGTCAAAGGAACTCTTaGCCTCACGTTCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCGQRNS*PHVPRN
Trigger: GTTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGGACCCACCGGTAACTaGCCTCAGCACAGTCGGACT +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHGPTGN*PQHSRT
Trigger: AGTCCGACTGTGCTGAGGCCAGTTACCGGTGGGTCC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGGACCCACCGGTAACTaGCCTCAGCACAGTCGGACT +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVGPTGN*PQHSRT
Trigger: AGTCCGACTGTGCTGAGGCCAGTTACCGGTGGGTCC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGAGGGACATCAGAGCCTaGCCCAGGTTGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQRDIRA*PRLSKL
Trigger: CAACTTTGACAACCTGGGCCAGGCTCTGATGTCCCT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCATTCATGATGGGCTGCTaGTCCACTCCCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAFMMGC*STPTAS
Trigger: GGATGCTGTGGGAGTGGACCAGCAGCCCATCATGAA...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCTGGTACACAGGTGGTaGACGAGGAGCCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRALVHRW*TRSRKR
Trigger: GCGCTTCCGGCTCCTCGTCCACCACCTGTGTACCAG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGAGGCTGCTCCAATGTaGGCCGTGGTGTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLEAAPM*AVVCGA
Trigger: GGCTCCACACACCACGGCCCACATTGGAGCAGCCTC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTACATGTAGCTGTCATTaGGCAGAGAGTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACATCSCH*AESVSG
Trigger: GCCGGACACACTCTCTGCCCAATGACAGCTACATGT...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCAAGATGGAGCCTGACTaGGCTTTGGGGAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSKMEPD*ALGSPQ
Trigger: CTGGGGGCTCCCCAAAGCCCAGTCAGGCTCCATCTT...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAAGATGGAGCCTGACTaGGCTTTGGGGAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVKMEPD*ALGSPQ
Trigger: CTGGGGGCTCCCCAAAGCCCAGTCAGGCTCCATCTT...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGCAGCTGGTGTCTGCTaGTTGGGAGTGAACAGACAA +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAAAGVC*LGVNRQ
Trigger: TTGTCTGTTCACTCCCAACCAGCAGACACCAGCTGC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGCTGTAGGATGCAGCTaGTGTCTGCTGGTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLAVGCS*CLLVGS
Trigger: ACTCCCAACCAGCAGACACCAGCTGCATCCTACAGC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGCTCTAAGCTGCTTCTaGTCTCTTGAGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQALSCF*SLEGPW
Trigger: CCAAGGACCCTCAAGAGACCAGAAGCAGCTTAGAGC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGCTCTAAGCTGCTTCTaGTCTCTTGAGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAALSCF*SLEGPW
Trigger: CCAAGGACCCTCAAGAGACCAGAAGCAGCTTAGAGC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGTTCTTCCTGACTGCTaGGCAGGAGGTCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAVLPDC*AGGLLK
Trigger: TTTCAGGAGACCTCCTGCCCAGCAGTCAGGAAGAAC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATGCTGTCAAGGGGGCTaGAGGCCGAGGGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLCCQGG*RPRDPS
Trigger: CGAAGGATCCCTCGGCCTCCAGCCCCCTTGACAGCA...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATTGCTGTCAAGGGGGCTaGAGGCCGAGGGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDCCQGG*RPRDPS
Trigger: CGAAGGATCCCTCGGCCTCCAGCCCCCTTGACAGCA...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCCGATTTCCTCTGCCTaGAAACCCTCCACGAGAATG +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAPISSA*KPSTRM
Trigger: CATTCTCGTGGAGGGTTTCCAGGCAGAGGAAATCGG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107793.8
3UTR CAA 72 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTaGGGTTGTAATACACTCACGGCCCCCGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPP*GCNTLTAPGLC
Trigger: GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTTGTCCTCACACGGCCTaGACATACCCAGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGCPHTA*TYPESH
Trigger: GTGTGACTCTGGGTATGTTCAGGCCGTGTGAGGACA...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGCCCTGCCCACAGCTaGACACCAACGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVSPAHS*TPTMPK
Trigger: CTTTGGCATCGTTGGTGTTCAGCTGTGGGCAGGGCT...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACAGCCCTGCCCACAGCTaGACACCAACGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHSPAHS*TPTMPK
Trigger: CTTTGGCATCGTTGGTGTTCAGCTGTGGGCAGGGCT...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCCCGTTCTCCCGAGGCTaGGAGCAGATGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLPFSRG*EQMKGL
Trigger: GAGCCCCTTCATCTGCTCTCAGCCTCGGGAGAACGG...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCCATCACAAAGTACATaGTGTCGACCCAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLPSQST*CRPSPP
Trigger: TGGAGGGCTGGGTCGACATCATGTACTTTGTGATGG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTGTACACCAGGTACTTaGGAAGCTCCTCATAGCAGC +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACACTPGT*EAPHSS
Trigger: GCTGCTATGAGGAGCTTCTCAAGTACCTGGTGTACA...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACAGACAGACGACGGTGTaGACGAGAGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHRQTTV*TRAAAT
Trigger: AGTGGCAGCTGCTCTCGTTCACACCGTCGTCTGTCT...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGCTTGTGCATGGAGCTaGAGGGCCCAGGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAACAWS*RAQVGC
Trigger: ACATCCCACCTGGGCCCTTCAGCTCCATGCACAAGC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGCTTGTGCATGGAGCTaGAGGGCCCAGGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLACAWS*RAQVGC
Trigger: ACATCCCACCTGGGCCCTTCAGCTCCATGCACAAGC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACACAGCCTCACTGTCTaGGTCAGGCATTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAHSLTV*VRHFMV
Trigger: GACCATGAAATGCCTGACTCAGACAGTGAGGCTGTG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCACAGCCTCACTGTCTaGGTCAGGCATTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLHSLTV*VRHFMV
Trigger: GACCATGAAATGCCTGACTCAGACAGTGAGGCTGTG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTTTTCCAGGGCGTTGGTaGGCTCCTCGGGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFFPGRW*APRAAR
Trigger: ACGAGCAGCCCGAGGAGCTCACCAACGCCCTGGAAA...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGAATCTGAAAGACAGTaGCAATGGCCCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLESERQ*QWPRAG
Trigger: CCCTGCTCTGGGCCATTGTCACTGTCTTTCAGATTC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAAGAGCAGCCCAAGATaGCGTGGAGGCCATGCCGTT +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVKSSPR*RGGHAV
Trigger: AACGGCATGGCCTCCACGTCATCTTGGGCTGCTCTT...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATTCATCCTGGCTCTCCTaGCCCTCTCCAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDSSWLS*PSPDSR
Trigger: CCTGCTGTCTGGAGAGGGTCAGGAGAGCCAGGATGA...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATGGCCCGGTCCTCTTCTaGACTCTCCTCCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDGPVLF*TLLLIL
Trigger: CAGGATGAGGAGGAGAGTTCAGAAGAGGACCGGGCC...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGGCCCGGTCCTCTTCTaGACTCTCCTCCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLGPVLF*TLLLIL
Trigger: CAGGATGAGGAGGAGAGTTCAGAAGAGGACCGGGCC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGAACCCCTGTGGCGATaGTCACTGCCTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFEPLWR*SLPAGL
Trigger: CAGCCCAGCAGGCAGTGATCATCGCCACAGGGGTTC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGAACCCCTGTGGCGATaGTCACTGCCTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLEPLWR*SLPAGL
Trigger: CAGCCCAGCAGGCAGTGATCATCGCCACAGGGGTTC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGCGGGCCAAACGCCCTaGAGCCGACTTGCCATTACA +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAAGQTP*SRLAIT
Trigger: TGTAATGGCAAGTCGGCTTCAGGGCGTTTGGCCCGC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTTGGGTGATGATCCGGTaGCACAGGAGACGAAACCTT +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLWVMIR*HRRRNL
Trigger: AAGGTTTCGTCTCCTGTGTCACCGGATCATCACCCA...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCATGGGTGATGATCCGGTaGCACAGGAGACGAAACCTT +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAWVMIR*HRRRNL
Trigger: AAGGTTTCGTCTCCTGTGTCACCGGATCATCACCCA...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCAATGGGTTTGAGGGATaGCATCAGAGTCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCNGFEG*HQSLYH
Trigger: GTGGTAGAGACTCTGATGTCATCCCTCAAACCCATT...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGCGAAGAACTTCCCTTTaGAGAGCTGCACCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQRRTSL*RAAPQE
Trigger: TTCTTGGGGTGCAGCTCTTCAAAGGGAAGTTCTTCG...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGCTGGTGTCCTCACCCTaGCACACGAAGAACTTCCCT +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGLVSSP*HTKNFP
Trigger: AGGGAAGTTCTTCGTGTGTCAGGGTGAGGACACCAG...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCTGGTGTCCTCACCCTaGCACACGAAGAACTTCCCT +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGLVSSP*HTKNFP
Trigger: AGGGAAGTTCTTCGTGTGTCAGGGTGAGGACACCAG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCAAGGGTTGTGGTTCATaGTGGGCTGCTGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAKGCGS*WAAGPL
Trigger: GAGTGGACCAGCAGCCCATCATGAACCACAACCCTT...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAAAGGGTTGTGGTTCATaGTGGGCTGCTGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLKGCGS*WAAGPL
Trigger: GAGTGGACCAGCAGCCCATCATGAACCACAACCCTT...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTAAGGGTTGTGGTTCATaGTGGGCTGCTGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGKGCGS*WAAGPL
Trigger: GAGTGGACCAGCAGCCCATCATGAACCACAACCCTT...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACAAGGGTTGTGGTTCATaGTGGGCTGCTGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHKGCGS*WAAGPL
Trigger: GAGTGGACCAGCAGCCCATCATGAACCACAACCCTT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTTGGGCAGTGAAGCATTaGCCTCAATCTCTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLWAVKH*PQSLPA
Trigger: CGCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCA...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGGGGTTGATGGGCAGTaGAGCATTGACCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLGVDGQ*SIDLNL
Trigger: GAGATTGAGGTCAATGCTTCACTGCCCATCAACCCC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGTAGATGGGTGAGATaGCGGTGTTGTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLSRWVR*RCCSRW
Trigger: CCACCTGCTACAACACCGTCATCTCACCCATCTACT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGCACGAAGTAGATGGGTaGGATGACGGTGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQHEVDG*DDGVVA
Trigger: TGCTACAACACCGTCATCTCACCCATCTACTTCGTG...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACAGTGGGGCTGCGGGCTaGGTGTCTTCATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHSGAAG*VSSSLA
Trigger: AGCTAGAGATGAAGACACTCAGCCCGCAGCCCCACT...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTACTCAAGGGAGAAGCCTaGAGAGGCTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLLKGEA*RGCSNV
Trigger: CACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAG...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCTCAAGGGAGAAGCCTaGAGAGGCTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGLKGEA*RGCSNV
Trigger: CACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGCTCAAGGGAGAAGCCTaGAGAGGCTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWLKGEA*RGCSNV
Trigger: CACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAG...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGACAAGATGGAGCCTaGCTGGGCTTTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDRQDGA*LGFGEP
Trigger: GGGCTCCCCAAAGCCCAGTCAGGCTCCATCTTGTCT...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCATCTGCTGGTTGGGAGTaGACAGACAAGATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWASAGWE*TDKMEP
Trigger: AGGCTCCATCTTGTCTGTTCACTCCCAACCAGCAGA...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTTCTGCTGGTTGGGAGTaGACAGACAAGATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLSAGWE*TDKMEP
Trigger: AGGCTCCATCTTGTCTGTTCACTCCCAACCAGCAGA...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGGGCCCACTCACCTCTaGCAACAGGTCTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLGPTHL*QQVFPA
Trigger: AGCCGGGAAGACCTGTTGTCAGAGGTGAGTGGGCCC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGGCCCCTCCTCAGTGTaGGGTACCATATTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVGPSSV*GTILLS
Trigger: GGAGAGCAATATGGTACCTCACACTGAGGAGGGGCC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGACAGGTCGTTGAGCTaGGTGAAGCTCCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRADRSLS*VKLRGC
Trigger: ACAGCCCCGGAGCTTCACGCAGCTCAACGACCTGTC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGAGAAGCTGACATTCTaGAGGTCCAGCGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLEKLTF*RSSEYS
Trigger: GGAGTACTCGCTGGACCTGCAGAATGTCAGCTTCTC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGTGTGGGCACGCTCCTaGAGGATCGCATGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAVWARS*RIACRS
Trigger: AGAACGGCATGCGATCCTGCAGGAGCGTGCCCACAC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGGGGTTGTGCTCGCCTaGAGAGCAGTTGGTATAGTA +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAGVVLA*RAVGIV
Trigger: TACTATACCAACTGCTCTGCAGGCGAGCACAACCCC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGGGGTTGTGCTCGCCTaGAGAGCAGTTGGTATAGTA +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLGVVLA*RAVGIV
Trigger: TACTATACCAACTGCTCTGCAGGCGAGCACAACCCC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGCCTTTGAAGGGGTTGTaGTCGCCTGCAGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWPLKGL*SPAEQL
Trigger: CAACTGCTCTGCAGGCGAGCACAACCCCTTCAAAGG...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCATGGCTCAGAGAAGCTTaGCAGGGTGCTAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAWLREA*QGASIG
Trigger: TCCAATGCTAGCACCCTGGCAAGCTTCTCTGAGCCA...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGCCTGCGGGCTGCTTTaGGGAGGATGTACACCAGGT +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAACGLL*GGCTPG
Trigger: ACCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGGCCAGCCTGCGGGCTaGTTTGCGGAGGATGTACAC +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLGQPAG*FAEDVH
Trigger: GTGTACATCCTCCGCAAAGCAGCCCGCAGGCTGGCC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGTGAACGAGAGCAGCTaGCACTGGGCTGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESVNESS*HWAGAP
Trigger: AGGAGCCCCAGCCCAGTGGCAGCTGCTCTCGTTCAC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGTGAACGAGAGCAGCTaGCACTGGGCTGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFVNESS*HWAGAP
Trigger: AGGAGCCCCAGCCCAGTGGCAGCTGCTCTCGTTCAC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCACAGTCCTGCCAGATaGCTCCGATGGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESHSPAR*LRWGPG
Trigger: CCCAGGTCCCCATCGGAGGCATCTGGCAGGACTGTG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCACAGTCCTGCCAGATaGCTCCGATGGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFHSPAR*LRWGPG
Trigger: CCCAGGTCCCCATCGGAGGCATCTGGCAGGACTGTG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCACTACCCACAGTCCTaGCAGATGCCTCCGATGGGG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAHYPQS*QMPPMG
Trigger: CCCCATCGGAGGCATCTGGCAGGACTGTGGGTAGTG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACACTACCCACAGTCCTaGCAGATGCCTCCGATGGGG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLHYPQS*QMPPMG
Trigger: CCCCATCGGAGGCATCTGGCAGGACTGTGGGTAGTG...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGGTGGAGGGCTGGTATaGACAGTGGGGTATACCTTC +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGGGGLV*TVGYTF
Trigger: GAAGGTATACCCCACTGTGCATACCAGCCCTCCACC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAAGGGCTGGAGATTTTaGAGGAGCTATGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLKGWRF*RSYGRL
Trigger: GAGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCACAGGCTCCACTGTCTaGCTTGGAGCAAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSTGSTV*LGARAG
Trigger: TCCAGCCCTTGCTCCAAGGCAGACAGTGGAGCCTGT...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGGACTCTGGCTCCCCTaGTCCTGTCCGGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESGLWLP*SCPGTV
Trigger: TACTGTGCCCGGACAGGAGCAGGGGAGCCAGAGTCC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGGACTCTGGCTCCCCTaGTCCTGTCCGGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLGLWLP*SCPGTV
Trigger: TACTGTGCCCGGACAGGAGCAGGGGAGCCAGAGTCC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCACAGAACTAGGCTCTaGATCTGGGCCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAHRTRL*IWAQAR
Trigger: CCGAGCCTGGGCCCAGATGCAGAGCCTAGTTCTGTG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGACAGGCCACCTCCCTaGTGGCCCACAATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFDRPPP*WPTISH
Trigger: GTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCTGTC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCTTCCCCCACACCTGTaGTGGAGCTCTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDLPPHL*WSSWAV
Trigger: CACTGCCCAAGAGCTCCAGCACAGGTGTGGGGGAAG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCTGTGGCGATGATCACTaGCTGCTGGGCTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLCGDDH*LLGWPG
Trigger: ACCGGGCCAGCCCAGCAGGCAGTGATCATCGCCACA...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGCCCTGAAGCCGACTTaGCATTACAGTCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQALKPT*HYSLGV
Trigger: AACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCCCCTTTGCTCAGGTTaGCCTCATCATCGCCATCAT +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLPLCSG*PHHRHH
Trigger: ATGATGGCGATGATGAGGGCAACCTGAGCAAAGGGG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACTGCCGAGAATCTTGGTaGCGCTGTCAGAGACCATGG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHCRESW*RCQRPW
Trigger: CCATGGTCTCTGACAGCGGCACCAAGATTCTCGGCA...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTGGTTCATGATGGGCTaGTGGTCCACTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWWFMMG*WSTPTA
Trigger: TGCTGTGGGAGTGGACCAGCAGCCCATCATGAACCA...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACTGGTTCATGATGGGCTaGTGGTCCACTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHWFMMG*WSTPTA
Trigger: TGCTGTGGGAGTGGACCAGCAGCCCATCATGAACCA...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTATGGTTCATGATGGGCTaGTGGTCCACTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLWFMMG*WSTPTA
Trigger: TGCTGTGGGAGTGGACCAGCAGCCCATCATGAACCA...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCAGCGCTGGCTGAGCTaGCGGAAGCAATTACATCGT +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGQRWLS*RKQLHR
Trigger: ACGATGTAATTGCTTCCGGCAGCTCAGCCAGCGCTG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107789.8
ENSMUST00000107790.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGTTGCTCTCTTCCAGGTaGTTCATCAGCACGGCTATG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQLLSSR*FISTAM
Trigger: CATAGCCGTGCTGATGAAGCACCTGGAAGAGAGCAA...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTGCTCTCTTCCAGGTaGTTCATCAGCACGGCTATG +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACALLSSR*FISTAM
Trigger: CATAGCCGTGCTGATGAAGCACCTGGAAGAGAGCAA...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGCGGCAGTGCTCCCATTaGGGCACATGTAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWRQCSH*GTCSCH
Trigger: ATGACAGCTACATGTGCCGCAATGGGAGCACTGCCG...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCCCACCACGGGCCACTaGGCTGCTGAGCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSPTTGH*AAEQPS
Trigger: GCTGGGTTGCTCAGCAGCCCAGTGGCCCGTGGTGGG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCTGTCCTGGATCTCTaGGCTGGCCCGGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESPVLDL*AGPGNS
Trigger: AGAGTTCCCCGGGCCAGCCCAGAGATCCAGGACAGG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCCCTGTCCTGGATCTCTaGGCTGGCCCGGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLPVLDL*AGPGNS
Trigger: AGAGTTCCCCGGGCCAGCCCAGAGATCCAGGACAGG...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCTTGGCATCCCTGTCCTaGATCTCTGGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESLASLS*ISGLAR
Trigger: CCGGGCCAGCCCAGAGATCCAGGACAGGGATGCCAA...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATGCCAGCGGGACCCATTaGCATCCCTGTCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDASGTH*HPCPGS
Trigger: AGATCCAGGACAGGGATGCCAATGGGTCCCGCTGGC...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCGCCTGGCAACGGACTaGCTCCAAGTGGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFRLATD*LQVAVS
Trigger: GCTGACTGCCACTTGGAGCCAGTCCGTTGCCAGGCG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGCCTGGCAACGGACTaGCTCCAAGTGGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESRLATD*LQVAVS
Trigger: GCTGACTGCCACTTGGAGCCAGTCCGTTGCCAGGCG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGGCTGGTATGCACAGTaGGGTATACCTTCCCACTAC +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAGWYAQ*GIPSHY
Trigger: GTAGTGGGAAGGTATACCCCACTGTGCATACCAGCC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGGCTGGTATGCACAGTaGGGTATACCTTCCCACTAC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLGWYAQ*GIPSHY
Trigger: GTAGTGGGAAGGTATACCCCACTGTGCATACCAGCC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCATCTCTGGTGGAGGGCTaGTATGCACAGTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWASLVEG*YAQWGI
Trigger: TATACCCCACTGTGCATACCAGCCCTCCACCAGAGA...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAATCCTTCAGCATCTCTaGTGGAGGGCTGGTATGCAC +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAILQHL*WRAGMH
Trigger: GTGCATACCAGCCCTCCACCAGAGATGCTGAAGGAT...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTATCCTTCAGCATCTCTaGTGGAGGGCTGGTATGCAC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLILQHL*WRAGMH
Trigger: GTGCATACCAGCCCTCCACCAGAGATGCTGAAGGAT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAAAATTCTTCCGGTCTaGCAACGTGTCCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLKILPV*QRVPIP
Trigger: CGGGATGGGGACACGTTGCCAGACCGGAAGAATTTT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACAGCCCAAGATGACGTaGAGGCCATGCCGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAQPKMT*RPCRCK
Trigger: TTTACAACGGCATGGCCTCCACGTCATCTTGGGCTG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCAGCCCAAGATGACGTaGAGGCCATGCCGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLQPKMT*RPCRCK
Trigger: TTTACAACGGCATGGCCTCCACGTCATCTTGGGCTG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCTGACTCAGACTTGGTaGCATCTCCCTCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHLTQTW*HLPLPG
Trigger: TCCAGGCAGAGGGAGATGCCACCAAGTCTGAGTCAG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGCTCTGACTCAGACTTaGTGGCATCTCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGALTQT*WHLPLP
Trigger: AGGCAGAGGGAGATGCCACCAAGTCTGAGTCAGAGC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000021234.15
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGGTCAAAGGAACTCTTaGCCTCACGTTCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQGQRNS*PHVPRN
Trigger: GTTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCATCATCCCCATCCAGTaGGGGGTCATCAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAIIPIQ*GVISPQ
Trigger: CTGCGGGCTGATGACCCCCCACTGGATGGGGATGAT...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAATCATCCCCATCCAGTaGGGGGTCATCAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLIIPIQ*GVISPQ
Trigger: CTGCGGGCTGATGACCCCCCACTGGATGGGGATGAT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATATCATCCCCATCCAGTaGGGGGTCATCAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDIIPIQ*GVISPQ
Trigger: CTGCGGGCTGATGACCCCCCACTGGATGGGGATGAT...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGCATGCCGAGAATCTTaGTGCCGCTGTCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHACRES*CRCQRP
Trigger: TGGTCTCTGACAGCGGCACCAAGATTCTCGGCATGC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGCATGCCGAGAATCTTaGTGCCGCTGTCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAACRES*CRCQRP
Trigger: TGGTCTCTGACAGCGGCACCAAGATTCTCGGCATGC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGGGACATCAGAGCCTaGCCCAGGTTGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLRDIRA*PRLSKL
Trigger: CAACTTTGACAACCTGGGCCAGGCTCTGATGTCCCT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCTTCATGATGGGCTGCTaGTCCACTCCCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAFMMGC*STPTAS
Trigger: GGATGCTGTGGGAGTGGACCAGCAGCCCATCATGAA...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGCATCCAAGGGTTGTaGTTCATGATGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLSIQGL*FMMGCW
Trigger: CCAGCAGCCCATCATGAACCACAACCCTTGGATGCT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATGGCTGGTACACAGGTaGTGGACGAGGAGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLWLVHR*WTRSRK
Trigger: CTTCCGGCTCCTCGTCCACCACCTGTGTACCAGCCA...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATTGGCTGGTACACAGGTaGTGGACGAGGAGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDWLVHR*WTRSRK
Trigger: CTTCCGGCTCCTCGTCCACCACCTGTGTACCAGCCA...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTACATGTAGCTGTCATTaGGCAGAGAGTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLTCSCH*AESVSG
Trigger: GCCGGACACACTCTCTGCCCAATGACAGCTACATGT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAACATGTAGCTGTCATTaGGCAGAGAGTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWATCSCH*AESVSG
Trigger: GCCGGACACACTCTCTGCCCAATGACAGCTACATGT...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAAGATGGAGCCTGACTaGGCTTTGGGGAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDKMEPD*ALGSPQ
Trigger: CTGGGGGCTCCCCAAAGCCCAGTCAGGCTCCATCTT...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTAGTGAACAGACAAGATaGAGCCTGACTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACASEQTR*SLTGLW
Trigger: CCAAAGCCCAGTCAGGCTCCATCTTGTCTGTTCACT...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGCAGCTGGTGTCTGCTaGTTGGGAGTGAACAGACAA +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLAAGVC*LGVNRQ
Trigger: TTGTCTGTTCACTCCCAACCAGCAGACACCAGCTGC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGGGATCCAGGTCTGTTaGGTCAGAAGACAAACCAGA +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAGIQVC*VRRQTR
Trigger: TCTGGTTTGTCTTCTGACCCAACAGACCTGGATCCC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGGGATCCAGGTCTGTTaGGTCAGAAGACAAACCAGA +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQGIQVC*VRRQTR
Trigger: TCTGGTTTGTCTTCTGACCCAACAGACCTGGATCCC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCCGATTTCCTCTGCCTaGAAACCCTCCACGAGAATG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLPISSA*KPSTRM
Trigger: CATTCTCGTGGAGGGTTTCCAGGCAGAGGAAATCGG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGTCCTCACACGGCCTaGACATACCCAGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHCPHTA*TYPESH
Trigger: GTGTGACTCTGGGTATGTTCAGGCCGTGTGAGGACA...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCTGTCCTCACACGGCCTaGACATACCCAGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSCPHTA*TYPESH
Trigger: GTGTGACTCTGGGTATGTTCAGGCCGTGTGAGGACA...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACAAAGAAGGCAAAGATaGAGTCGTCGAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAQRRQR*SRRRPA
Trigger: TGCAGGCCTTCGACGACTTCATCTTTGCCTTCTTTG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCAAAGAAGGCAAAGATaGAGTCGTCGAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLQRRQR*SRRRPA
Trigger: TGCAGGCCTTCGACGACTTCATCTTTGCCTTCTTTG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTAGTATTGGTTCCAGTTaGCACAGGTGGTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACASIGSS*HRWYCW
Trigger: CCAGCAATACCACCTGTGTCAACTGGAACCAATACT...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGAGTATTGGTTCCAGTTaGCACAGGTGGTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQSIGSS*HRWYCW
Trigger: CCAGCAATACCACCTGTGTCAACTGGAACCAATACT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCCATCACAAAGTACATaGTGTCGACCCAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHPSQST*CRPSPP
Trigger: TGGAGGGCTGGGTCGACATCATGTACTTTGTGATGG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCATCACAAAGTACATaGTGTCGACCCAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAPSQST*CRPSPP
Trigger: TGGAGGGCTGGGTCGACATCATGTACTTTGTGATGG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGGGCCACTGGGCTGCTaGGCAACCCAGCCCGCACGC +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRGPLGC*ATQPAR
Trigger: GCGTGCGGGCTGGGTTGCTCAGCAGCCCAGTGGCCC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGGGCCACTGGGCTGCTaGGCAACCCAGCCCGCACGC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLGPLGC*ATQPAR
Trigger: GCGTGCGGGCTGGGTTGCTCAGCAGCCCAGTGGCCC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCAGACAGACGACGGTGTaGACGAGAGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRARQTTV*TRAAAT
Trigger: AGTGGCAGCTGCTCTCGTTCACACCGTCGTCTGTCT...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGGGTGGTGGCAGCATaGGCCAGCGGGACCCATTGG +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSRVVAA*ASGTHW
Trigger: CCAATGGGTCCCGCTGGCTCATGCTGCCACCACCCT...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCACAGCCTCACTGTCTaGGTCAGGCATTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGHSLTV*VRHFMV
Trigger: GACCATGAAATGCCTGACTCAGACAGTGAGGCTGTG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGCACAGCCTCACTGTCTaGGTCAGGCATTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWHSLTV*VRHFMV
Trigger: GACCATGAAATGCCTGACTCAGACAGTGAGGCTGTG...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCGGAGGTCGCTGTGCTaGGCGTCCTGTGTGAACTCA +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFRRSLC*ASCVNS
Trigger: TGAGTTCACACAGGACGCTCAGCACAGCGACCTCCG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGGAGGTCGCTGTGCTaGGCGTCCTGTGTGAACTCA +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESRRSLC*ASCVNS
Trigger: TGAGTTCACACAGGACGCTCAGCACAGCGACCTCCG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGAATCTGAAAGACAGTaGCAATGGCCCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWESERQ*QWPRAG
Trigger: CCCTGCTCTGGGCCATTGTCACTGTCTTTCAGATTC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCAAGAGCAGCCCAAGATaGCGTGGAGGCCATGCCGTT +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAKSSPR*RGGHAV
Trigger: AACGGCATGGCCTCCACGTCATCTTGGGCTGCTCTT...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTAAAGAAATCAGGCTCTaGCTCAGACTTGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAKEIRL*LRLGGI
Trigger: GATGCCACCAAGTCTGAGTCAGAGCCTGATTTCTTT...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGAATGGGTTTGAGGGATaGCATCAGAGTCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQNGFEG*HQSLYH
Trigger: GTGGTAGAGACTCTGATGTCATCCCTCAAACCCATT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTAATGGGTTTGAGGGATaGCATCAGAGTCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: LKMGRRWVVIHSRPPACANGFEG*HQSLYH
Trigger: GTGGTAGAGACTCTGATGTCATCCCTCAAACCCATT...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACGAAGAACTTCCCTTTaGAGAGCTGCACCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWARRTSL*RAAPQE
Trigger: TTCTTGGGGTGCAGCTCTTCAAAGGGAAGTTCTTCG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCAAGGGTTGTGGTTCATaGTGGGCTGCTGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSKGCGS*WAAGPL
Trigger: GAGTGGACCAGCAGCCCATCATGAACCACAACCCTT...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTTGGGCAGTGAAGCATTaGCCTCAATCTCTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGWAVKH*PQSLPA
Trigger: CGCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCA...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGGGGTTGATGGGCAGTaGAGCATTGACCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWGVDGQ*SIDLNL
Trigger: GAGATTGAGGTCAATGCTTCACTGCCCATCAACCCC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACACGAAGTAGATGGGTaGGATGACGGTGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAHEVDG*DDGVVA
Trigger: TGCTACAACACCGTCATCTCACCCATCTACTTCGTG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCACGAAGTAGATGGGTaGGATGACGGTGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLHEVDG*DDGVVA
Trigger: TGCTACAACACCGTCATCTCACCCATCTACTTCGTG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCAGTGGGGCTGCGGGCTaGGTGTCTTCATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRASGAAG*VSSSLA
Trigger: AGCTAGAGATGAAGACACTCAGCCCGCAGCCCCACT...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACCTCAAGGGAGAAGCCTaGAGAGGCTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHLKGEA*RGCSNV
Trigger: CACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAG...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTTCTGCTGGTTGGGAGTaGACAGACAAGATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGSAGWE*TDKMEP
Trigger: AGGCTCCATCTTGTCTGTTCACTCCCAACCAGCAGA...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGTTGCTGCCTGGCGCCTaGGAGGCCTCTGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSLLPGA*EASEPE
Trigger: CTCTGGCTCAGAGGCCTCTCAGGCGCCAGGCAGCAA...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGGGCAGGAGGTCTCCTaGAATCCAGCTCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFGQEVS*NPAQLR
Trigger: ACGGAGCTGAGCTGGATTTCAGGAGACCTCCTGCCC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGACAGGGGTTCTTCCTaGCTGCTGGGCAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLDRGSS*LLGRRS
Trigger: AGACCTCCTGCCCAGCAGTCAGGAAGAACCCCTGTC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCAGGGGTTCTTCCTCTaGCAACAGGTCTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAQGFFL*QQVFPA
Trigger: AGCCGGGAAGACCTGTTGTCAGAGGAAGAACCCCTG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107785.2
CDS-3UTR GCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGAGAAGCTGACATTCTaGAGGTCCAGCGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAEKLTF*RSSEYS
Trigger: GGAGTACTCGCTGGACCTGCAGAATGTCAGCTTCTC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGAGAAGCTGACATTCTaGAGGTCCAGCGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHEKLTF*RSSEYS
Trigger: GGAGTACTCGCTGGACCTGCAGAATGTCAGCTTCTC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGTGTGGGCACGCTCCTaGAGGATCGCATGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLVWARS*RIACRS
Trigger: AGAACGGCATGCGATCCTGCAGGAGCGTGCCCACAC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGGGGTTGTGCTCGCCTaGAGAGCAGTTGGTATAGTA +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLGVVLA*RAVGIV
Trigger: TACTATACCAACTGCTCTGCAGGCGAGCACAACCCC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTCCTTTGAAGGGGTTGTaGTCGCCTGCAGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVPLKGL*SPAEQL
Trigger: CAACTGCTCTGCAGGCGAGCACAACCCCTTCAAAGG...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGTGGCTCAGAGAAGCTTaGCAGGGTGCTAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGWLREA*QGASIG
Trigger: TCCAATGCTAGCACCCTGGCAAGCTTCTCTGAGCCA...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGCCTGCGGGCTGCTTTaGGGAGGATGTACACCAGGT +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFACGLL*GGCTPG
Trigger: ACCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGACCTGGGCCAGCCTaGGGGCTGCTTTGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSRPGPA*GLLCGG
Trigger: TCCTCCGCAAAGCAGCCCGCAGGCTGGCCCAGGTCT...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCACTACCCACAGTCCTaGCAGATGCCTCCGATGGGG +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESHYPQS*QMPPMG
Trigger: CCCCATCGGAGGCATCTGGCAGGACTGTGGGTAGTG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGGTGGAGGGCTGGTATaGACAGTGGGGTATACCTTC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSGGGLV*TVGYTF
Trigger: GAAGGTATACCCCACTGTGCATACCAGCCCTCCACC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAAAGGGCTGGAGATTTTaGAGGAGCTATGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLKGWRF*RSYGRL
Trigger: GAGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTT...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCACAGGCTCCACTGTCTaGCTTGGAGCAAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRATGSTV*LGARAG
Trigger: TCCAGCCCTTGCTCCAAGGCAGACAGTGGAGCCTGT...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCACAGAACTAGGCTCTaGATCTGGGCCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESHRTRL*IWAQAR
Trigger: CCGAGCCTGGGCCCAGATGCAGAGCCTAGTTCTGTG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGTTGCAACCAAAAAGGTaGATGCCCAGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQLQPKR*MPRMLK
Trigger: CTTCAGCATCCTGGGCATGCACCTTTTTGGTTGCAA...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGCGATGATCACTGCCTaGTGGGCTGGCCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSAMITA*WAGPVL
Trigger: GAGGACCGGGCCAGCCCAGCAGGCAGTGATCATCGC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGCCCCTTTGCTCAGGTTaGCCTCATCATCGCCATCAT +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWPLCSG*PHHRHH
Trigger: ATGATGGCGATGATGAGGGCAACCTGAGCAAAGGGG...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGTTCAGCCAGGAAGACTaGCGTGAAGATGTAGTTGGA +
Preference number: 4 (lower is better)
Translates to: HGTFQKDCPGGGARICTQFSQED*REDVVG
Trigger: TCCAACTACATCTTCACGGCAGTCTTCCTGGCTGAA...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTAAAGCACCAGCCCAGTaGCACCACCTTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGKAPAQ*HHLHCH
Trigger: ATGACAGTGAAGGTGGTGGCACTGGGCTGGTGCTTT...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACAAAGCACCAGCCCAGTaGCACCACCTTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHKAPAQ*HHLHCH
Trigger: ATGACAGTGAAGGTGGTGGCACTGGGCTGGTGCTTT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGCAGCACCCTCAGCATaGCGAGAATCTTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLAAPSA*RESWCR
Trigger: GCGGCACCAAGATTCTCGGCATGCTGAGGGTGCTGC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGTTCATGATGGGCTaGTGGTCCACTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHWFMMG*WSTPTA
Trigger: TGCTGTGGGAGTGGACCAGCAGCCCATCATGAACCA...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCAGAGTAGTAGGGTTTaGACTGGGCTTCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHQSSRV*TGLLTQ
Trigger: CTGCGTCAGAAGCCCAGTGCAAACCCTACTACTCTG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107789.8
ENSMUST00000107790.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGGTACCATCGTGGGGTaGTCAAGGGAGAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVGTIVG*SREKPE
Trigger: TTCAGGCTTCTCCCTTGAGCACCCCACGATGGTACC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGGTACCATCGTGGGGTaGTCAAGGGAGAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSGTIVG*SREKPE
Trigger: TTCAGGCTTCTCCCTTGAGCACCCCACGATGGTACC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTCGGCAGTGCTCCCATTaGGGCACATGTAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVRQCSH*GTCSCH
Trigger: ATGACAGCTACATGTGCCGCAATGGGAGCACTGCCG...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACCGGCAGTGCTCCCATTaGGGCACATGTAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHRQCSH*GTCSCH
Trigger: ATGACAGCTACATGTGCCGCAATGGGAGCACTGCCG...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGATGCAGCTGGTGTCTaGTGGTTGGGAGTGAACAGA +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHDAAGV*WLGVNR
Trigger: TCTGTTCACTCCCAACCAGCAGACACCAGCTGCATC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGCTGGCAGGCGGATGTaGTTGGAGACTTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLAGRRM*LETLLW
Trigger: CCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAAGGATCCGGCAGCGTTaGGAGTCACAGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLRIRQR*ESQAMS
Trigger: GGACATTGCCTGTGACTCCCAACGCTGCCGGATCCT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGTCCAGTGTGATGACCTaGAAGATGGCGATCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGSSVMT*KMAIQA
Trigger: TGCCTGGATCGCCATCTTCCAGGTCATCACACTGGA...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGACTCTCCCGTTGCTTaGTCTCAGAGAACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLDSPVA*SQRTVW
Trigger: CCACACAGTTCTCTGAGACCAAGCAACGGGAGAGTC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTTGGTGGTGGACCAGGTaGTGGACAGACAGACGACGG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFWWWTR*WTDRRR
Trigger: CCGTCGTCTGTCTGTCCACCACCTGGTCCACCACCA...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGCCAGCGGGACCCATTaGCATCCCTGTCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLASGTH*HPCPGS
Trigger: AGATCCAGGACAGGGATGCCAATGGGTCCCGCTGGC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGCCAGCGGGACCCATTaGCATCCCTGTCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFASGTH*HPCPGS
Trigger: AGATCCAGGACAGGGATGCCAATGGGTCCCGCTGGC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGCCAGCGGGACCCATTaGCATCCCTGTCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESASGTH*HPCPGS
Trigger: AGATCCAGGACAGGGATGCCAATGGGTCCCGCTGGC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACTCTCTGGTGGAGGGCTaGTATGCACAGTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHSLVEG*YAQWGI
Trigger: TATACCCCACTGTGCATACCAGCCCTCCACCAGAGA...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCTCTCTGGTGGAGGGCTaGTATGCACAGTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTASLVEG*YAQWGI
Trigger: TATACCCCACTGTGCATACCAGCCCTCCACCAGAGA...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCATCCTTCAGCATCTCTaGTGGAGGGCTGGTATGCAC +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAILQHL*WRAGMH
Trigger: GTGCATACCAGCCCTCCACCAGAGATGCTGAAGGAT...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTATCCTTCAGCATCTCTaGTGGAGGGCTGGTATGCAC +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGILQHL*WRAGMH
Trigger: GTGCATACCAGCCCTCCACCAGAGATGCTGAAGGAT...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGATCCTTCAGCATCTCTaGTGGAGGGCTGGTATGCAC +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWILQHL*WRAGMH
Trigger: GTGCATACCAGCCCTCCACCAGAGATGCTGAAGGAT...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGAAAATTCTTCCGGTCTaGCAACGTGTCCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWKILPV*QRVPIP
Trigger: CGGGATGGGGACACGTTGCCAGACCGGAAGAATTTT...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCAAAATTCTTCCGGTCTaGCAACGTGTCCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAKILPV*QRVPIP
Trigger: CGGGATGGGGACACGTTGCCAGACCGGAAGAATTTT...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCAGCCCAAGATGACGTaGAGGCCATGCCGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAQPKMT*RPCRCK
Trigger: TTTACAACGGCATGGCCTCCACGTCATCTTGGGCTG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGCAGCCCAAGATGACGTaGAGGCCATGCCGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWQPKMT*RPCRCK
Trigger: TTTACAACGGCATGGCCTCCACGTCATCTTGGGCTG...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGCATCTCCCTCTGCCTaGAAACCCTCCACGAGAATG +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSASPSA*KPSTRM
Trigger: CATTCTCGTGGAGGGTTTCCAGGCAGAGGGAGATGC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCCTGACTCAGACTTGGTaGCATCTCCCTCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSLTQTW*HLPLPG
Trigger: TCCAGGCAGAGGGAGATGCCACCAAGTCTGAGTCAG...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGCTCTGACTCAGACTTaGTGGCATCTCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVALTQT*WHLPLP
Trigger: AGGCAGAGGGAGATGCCACCAAGTCTGAGTCAGAGC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021234.15
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGGTCAAAGGAACTCTTaGCCTCACGTTCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAGQRNS*PHVPRN
Trigger: GTTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGGTCAAAGGAACTCTTaGCCTCACGTTCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLGQRNS*PHVPRN
Trigger: GTTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTATCATCCCCATCCAGTaGGGGGTCATCAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFIIPIQ*GVISPQ
Trigger: CTGCGGGCTGATGACCCCCCACTGGATGGGGATGAT...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGCATGCCGAGAATCTTaGTGCCGCTGTCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSACRES*CRCQRP
Trigger: TGGTCTCTGACAGCGGCACCAAGATTCTCGGCATGC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGGACCCACCGGTAACTaGCCTCAGCACAGTCGGACT +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESGPTGN*PQHSRT
Trigger: AGTCCGACTGTGCTGAGGCCAGTTACCGGTGGGTCC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGGACCCACCGGTAACTaGCCTCAGCACAGTCGGACT +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLGPTGN*PQHSRT
Trigger: AGTCCGACTGTGCTGAGGCCAGTTACCGGTGGGTCC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCTTCATGATGGGCTGCTaGTCCACTCCCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSFMMGC*STPTAS
Trigger: GGATGCTGTGGGAGTGGACCAGCAGCCCATCATGAA...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTTTCATGATGGGCTGCTaGTCCACTCCCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVFMMGC*STPTAS
Trigger: GGATGCTGTGGGAGTGGACCAGCAGCCCATCATGAA...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACAGCATCCAAGGGTTGTaGTTCATGATGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHSIQGL*FMMGCW
Trigger: CCAGCAGCCCATCATGAACCACAACCCTTGGATGCT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTAGCATCCAAGGGTTGTaGTTCATGATGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGSIQGL*FMMGCW
Trigger: CCAGCAGCCCATCATGAACCACAACCCTTGGATGCT...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTTGGCTGGTACACAGGTaGTGGACGAGGAGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFWLVHR*WTRSRK
Trigger: CTTCCGGCTCCTCGTCCACCACCTGTGTACCAGCCA...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCGGTGTTGTAGCAGGTaGACTCCTGGTCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDRCCSR*TPGHSP
Trigger: GGGACTGTGACCAGGAGTCCACCTGCTACAACACCG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGACATGTAGCTGTCATTaGGCAGAGAGTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWTCSCH*AESVSG
Trigger: GCCGGACACACTCTCTGCCCAATGACAGCTACATGT...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGCTGTAGGATGCAGCTaGTGTCTGCTGGTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSAVGCS*CLLVGS
Trigger: ACTCCCAACCAGCAGACACCAGCTGCATCCTACAGC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGCTGTAGGATGCAGCTaGTGTCTGCTGGTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHAVGCS*CLLVGS
Trigger: ACTCCCAACCAGCAGACACCAGCTGCATCCTACAGC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGCTCTAAGCTGCTTCTaGTCTCTTGAGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWALSCF*SLEGPW
Trigger: CCAAGGACCCTCAAGAGACCAGAAGCAGCTTAGAGC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGTTCTTCCTGACTGCTaGGCAGGAGGTCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLVLPDC*AGGLLK
Trigger: TTTCAGGAGACCTCCTGCCCAGCAGTCAGGAAGAAC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGTTCTTCCTGACTGCTaGGCAGGAGGTCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWVLPDC*AGGLLK
Trigger: TTTCAGGAGACCTCCTGCCCAGCAGTCAGGAAGAAC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGTTCTTCCTGACTGCTaGGCAGGAGGTCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGVLPDC*AGGLLK
Trigger: TTTCAGGAGACCTCCTGCCCAGCAGTCAGGAAGAAC...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGTTCTTCCTGACTGCTaGGCAGGAGGTCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHVLPDC*AGGLLK
Trigger: TTTCAGGAGACCTCCTGCCCAGCAGTCAGGAAGAAC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGGGATCCAGGTCTGTTaGGTCAGAAGACAAACCAGA +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAGIQVC*VRRQTR
Trigger: TCTGGTTTGTCTTCTGACCCAACAGACCTGGATCCC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCCGATTTCCTCTGCCTaGAAACCCTCCACGAGAATG +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGPISSA*KPSTRM
Trigger: CATTCTCGTGGAGGGTTTCCAGGCAGAGGAAATCGG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107793.8
3UTR CAA 72 bp CCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTaGTGCTTTACAAGAAGAGGGGATAGAACTAGACTG +
Preference number: 4 (lower is better)
Translates to: PPLGCNTLTAPG*CFTRRGDRTRL
Trigger: CAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCAGCCCTGCCCACAGCTaGACACCAACGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLSPAHS*TPTMPK
Trigger: CTTTGGCATCGTTGGTGTTCAGCTGTGGGCAGGGCT...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTAGCCCTGCCCACAGCTaGACACCAACGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFSPAHS*TPTMPK
Trigger: CTTTGGCATCGTTGGTGTTCAGCTGTGGGCAGGGCT...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCACTCAGCGGGAGGCTaGAATTCTCAGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESHSAGG*NSQGGS
Trigger: GCTTCCTCCCTGAGAATTTCAGCCTCCCGCTGAGTG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCACTCAGCGGGAGGCTaGAATTCTCAGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFHSAGG*NSQGGS
Trigger: GCTTCCTCCCTGAGAATTTCAGCCTCCCGCTGAGTG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGTATTGGTTCCAGTTaGCACAGGTGGTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLSIGSS*HRWYCW
Trigger: CCAGCAATACCACCTGTGTCAACTGGAACCAATACT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAAGTATTGGTTCCAGTTaGCACAGGTGGTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWASIGSS*HRWYCW
Trigger: CCAGCAATACCACCTGTGTCAACTGGAACCAATACT...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACCCATCACAAAGTACATaGTGTCGACCCAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHPSQST*CRPSPP
Trigger: TGGAGGGCTGGGTCGACATCATGTACTTTGTGATGG...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGTGTACACCAGGTACTTaGGAAGCTCCTCATAGCAGC +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGCTPGT*EAPHSS
Trigger: GCTGCTATGAGGAGCTTCTCAAGTACCTGGTGTACA...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTTGTACACCAGGTACTTaGGAAGCTCCTCATAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGCTPGT*EAPHSS
Trigger: GCTGCTATGAGGAGCTTCTCAAGTACCTGGTGTACA...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTATGTACACCAGGTACTTaGGAAGCTCCTCATAGCAGC +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLCTPGT*EAPHSS
Trigger: GCTGCTATGAGGAGCTTCTCAAGTACCTGGTGTACA...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGGGCCACTGGGCTGCTaGGCAACCCAGCCCGCACGC +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIGPLGC*ATQPAR
Trigger: GCGTGCGGGCTGGGTTGCTCAGCAGCCCAGTGGCCC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGGGCCACTGGGCTGCTaGGCAACCCAGCCCGCACGC +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYGPLGC*ATQPAR
Trigger: GCGTGCGGGCTGGGTTGCTCAGCAGCCCAGTGGCCC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGAATCTGAAAGACAGTaGCAATGGCCCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHESERQ*QWPRAG
Trigger: CCCTGCTCTGGGCCATTGTCACTGTCTTTCAGATTC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCAAGAGCAGCCCAAGATaGCGTGGAGGCCATGCCGTT +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESKSSPR*RGGHAV
Trigger: AACGGCATGGCCTCCACGTCATCTTGGGCTGCTCTT...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCAGGAGACGAAACCTTaGCTGGGGAGGGAAGATATA +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHQETKP*LGREDI
Trigger: TATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCAGGAGACGAAACCTTaGCTGGGGAGGGAAGATATA +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGQETKP*LGREDI
Trigger: TATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTACAGGAGACGAAACCTTaGCTGGGGAGGGAAGATATA +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLQETKP*LGREDI
Trigger: TATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTG...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTTGGGTGATGATCCGGTaGCACAGGAGACGAAACCTT +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVWVMIR*HRRRNL
Trigger: AAGGTTTCGTCTCCTGTGTCACCGGATCATCACCCA...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGCGAAGAACTTCCCTTTaGAGAGCTGCACCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGRRTSL*RAAPQE
Trigger: TTCTTGGGGTGCAGCTCTTCAAAGGGAAGTTCTTCG...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGCGAAGAACTTCCCTTTaGAGAGCTGCACCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWRRTSL*RAAPQE
Trigger: TTCTTGGGGTGCAGCTCTTCAAAGGGAAGTTCTTCG...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACTGGTGTCCTCACCCTaGCACACGAAGAACTTCCCT +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLLVSSP*HTKNFP
Trigger: AGGGAAGTTCTTCGTGTGTCAGGGTGAGGACACCAG...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCTGGTGTCCTCACCCTaGCACACGAAGAACTTCCCT +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDLVSSP*HTKNFP
Trigger: AGGGAAGTTCTTCGTGTGTCAGGGTGAGGACACCAG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAAAGGGTTGTGGTTCATaGTGGGCTGCTGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLKGCGS*WAAGPL
Trigger: GAGTGGACCAGCAGCCCATCATGAACCACAACCCTT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGGGGTTGATGGGCAGTaGAGCATTGACCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSGVDGQ*SIDLNL
Trigger: GAGATTGAGGTCAATGCTTCACTGCCCATCAACCCC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGGGGTTGATGGGCAGTaGAGCATTGACCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHGVDGQ*SIDLNL
Trigger: GAGATTGAGGTCAATGCTTCACTGCCCATCAACCCC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTACACGAAGTAGATGGGTaGGATGACGGTGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLHEVDG*DDGVVA
Trigger: TGCTACAACACCGTCATCTCACCCATCTACTTCGTG...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTTCTGCTGGTTGGGAGTaGACAGACAAGATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVSAGWE*TDKMEP
Trigger: AGGCTCCATCTTGTCTGTTCACTCCCAACCAGCAGA...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCTCTGCTGGTTGGGAGTaGACAGACAAGATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSSAGWE*TDKMEP
Trigger: AGGCTCCATCTTGTCTGTTCACTCCCAACCAGCAGA...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGGGCCCACTCACCTCTaGCAACAGGTCTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSGPTHL*QQVFPA
Trigger: AGCCGGGAAGACCTGTTGTCAGAGGTGAGTGGGCCC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACCGGCGCCCTCCTCCTaGGGCAGACGCCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILPAPSS*GRRQDC
Trigger: GCAGTCCTGGCGTCTGCCTCAGGAGGAGGGCGCCGG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACCGGCGCCCTCCTCCTaGGGCAGACGCCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIPAPSS*GRRQDC
Trigger: GCAGTCCTGGCGTCTGCCTCAGGAGGAGGGCGCCGG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCTTTCTTTGGGGAGGGTaGGGCAGCCGTGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESFLWGG*GSRAVK
Trigger: CTTGACAGCACGGCTGCCTCACCCTCCCCAAAGAAA...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTTTTCTTTGGGGAGGGTaGGGCAGCCGTGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFFLWGG*GSRAVK
Trigger: CTTGACAGCACGGCTGCCTCACCCTCCCCAAAGAAA...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGAGTTGACAGGCAGCTaGATACAGCTTAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAELTGS*IQLNCP
Trigger: TGGACAGTTAAGCTGTATTCAGCTGCCTGTCAACTC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGACGGGTTACAGACCGTaGGGAGACACCAGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSTGYRP*GDTSSA
Trigger: CGCGGAGCTGGTGTCTCCGCACGGTCTGTAACCCGT...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGGGGTTGTGCTCGCCTaGAGAGCAGTTGGTATAGTA +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVGVVLA*RAVGIV
Trigger: TACTATACCAACTGCTCTGCAGGCGAGCACAACCCC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTTGGCTCAGAGAAGCTTaGCAGGGTGCTAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVWLREA*QGASIG
Trigger: TCCAATGCTAGCACCCTGGCAAGCTTCTCTGAGCCA...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGTGAACGAGAGCAGCTaGCACTGGGCTGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSVNESS*HWAGAP
Trigger: AGGAGCCCCAGCCCAGTGGCAGCTGCTCTCGTTCAC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGGTGGAGGGCTGGTATaGACAGTGGGGTATACCTTC +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLGGGLV*TVGYTF
Trigger: GAAGGTATACCCCACTGTGCATACCAGCCCTCCACC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAAGGGCTGGAGATTTTaGAGGAGCTATGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVKGWRF*RSYGRL
Trigger: GAGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTT...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCAAGGGCTGGAGATTTTaGAGGAGCTATGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSKGWRF*RSYGRL
Trigger: GAGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTT...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTACAGGCTCCACTGTCTaGCTTGGAGCAAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFTGSTV*LGARAG
Trigger: TCCAGCCCTTGCTCCAAGGCAGACAGTGGAGCCTGT...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGACAGGCCACCTCCCTaGTGGCCCACAATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSDRPPP*WPTISH
Trigger: GTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCTGTC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGTGTGGCGATGATCACTaGCTGCTGGGCTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSCGDDH*LLGWPG
Trigger: ACCGGGCCAGCCCAGCAGGCAGTGATCATCGCCACA...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGCCCTGAAGCCGACTTaGCATTACAGTCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAALKPT*HYSLGV
Trigger: AACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCCTGAAGCCGACTTaGCATTACAGTCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGALKPT*HYSLGV
Trigger: AACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGC...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGCCCTGAAGCCGACTTaGCATTACAGTCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGALKPT*HYSLGV
Trigger: AACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGCCCTGAAGCCGACTTaGCATTACAGTCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWALKPT*HYSLGV
Trigger: AACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGCCCTGAAGCCGACTTaGCATTACAGTCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHALKPT*HYSLGV
Trigger: AACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTCCCCTTTGCTCAGGTTaGCCTCATCATCGCCATCAT +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVPLCSG*PHHRHH
Trigger: ATGATGGCGATGATGAGGGCAACCTGAGCAAAGGGG...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACCCCCTTTGCTCAGGTTaGCCTCATCATCGCCATCAT +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHPLCSG*PHHRHH
Trigger: ATGATGGCGATGATGAGGGCAACCTGAGCAAAGGGG...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCATTCAGCCAGGAAGACTaGCGTGAAGATGTAGTTGGA +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAFSQED*REDVVG
Trigger: TCCAACTACATCTTCACGGCAGTCTTCCTGGCTGAA...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTTTCAGCCAGGAAGACTaGCGTGAAGATGTAGTTGGA +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLFSQED*REDVVG
Trigger: TCCAACTACATCTTCACGGCAGTCTTCCTGGCTGAA...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTGCCGAGAATCTTGGTaGCGCTGTCAGAGACCATGG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRACRESW*RCQRPW
Trigger: CCATGGTCTCTGACAGCGGCACCAAGATTCTCGGCA...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCAGCGCTGGCTGAGCTaGCGGAAGCAATTACATCGT +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDQRWLS*RKQLHR
Trigger: ACGATGTAATTGCTTCCGGCAGCTCAGCCAGCGCTG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107789.8
ENSMUST00000107790.8
CDS-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCACCGTGTCCAGCAGTaGCCGCATGCCCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSHRVQQ*PHAHSH
Trigger: ATGGCTGTGGGCATGCGGGCACTGCTGGACACGGTG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTATTGCTCTCTTCCAGGTaGTTCATCAGCACGGCTATG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLLLSSR*FISTAM
Trigger: CATAGCCGTGCTGATGAAGCACCTGGAAGAGAGCAA...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGGTACCATCGTGGGGTaGTCAAGGGAGAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLGTIVG*SREKPE
Trigger: TTCAGGCTTCTCCCTTGAGCACCCCACGATGGTACC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACGGCAGTGCTCCCATTaGGGCACATGTAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLRQCSH*GTCSCH
Trigger: ATGACAGCTACATGTGCCGCAATGGGAGCACTGCCG...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGATGCAGCTGGTGTCTaGTGGTTGGGAGTGAACAGA +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVDAAGV*WLGVNR
Trigger: TCTGTTCACTCCCAACCAGCAGACACCAGCTGCATC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGATGCAGCTGGTGTCTaGTGGTTGGGAGTGAACAGA +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHDAAGV*WLGVNR
Trigger: TCTGTTCACTCCCAACCAGCAGACACCAGCTGCATC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGCTGGCAGGCGGATGTaGTTGGAGACTTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFAGRRM*LETLLW
Trigger: CCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGCTGGCAGGCGGATGTaGTTGGAGACTTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLAGRRM*LETLLW
Trigger: CCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTATGTCCAGCTCTAAGCTaGTTCTGGTCTCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLCPALS*FWSLEG
Trigger: ACCCTCAAGAGACCAGAAGCAGCTTAGAGCTGGACA...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGGCAGACGCCAGGACTaGATGGGGGCCGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRGRRQD*MGAEGP
Trigger: AGGGCCCTCGGCCCCCATGCAGTCCTGGCGTCTGCC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGGCAGACGCCAGGACTaGATGGGGGCCGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLGRRQD*MGAEGP
Trigger: AGGGCCCTCGGCCCCCATGCAGTCCTGGCGTCTGCC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTTTGCCGATTTCCTCTaGCTGGAAACCCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHFADFL*LETLHE
Trigger: CTCGTGGAGGGTTTCCAGGCAGAGGAAATCGGCAAA...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTCCAGTGTGATGACCTaGAAGATGGCGATCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHSSVMT*KMAIQA
Trigger: TGCCTGGATCGCCATCTTCCAGGTCATCACACTGGA...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGACAGCTGCCACTGGGCTaGGGCTCCTGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRQLPLG*GSCPPR
Trigger: CCGTGGTGGGCAGGAGCCCCAGCCCAGTGGCAGCTG...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACAGCTGCCACTGGGCTaGGGCTCCTGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRQLPLG*GSCPPR
Trigger: CCGTGGTGGGCAGGAGCCCCAGCCCAGTGGCAGCTG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGGCTGGTATGCACAGTaGGGTATACCTTCCCACTAC +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHGWYAQ*GIPSHY
Trigger: GTAGTGGGAAGGTATACCCCACTGTGCATACCAGCC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGGCTGGTATGCACAGTaGGGTATACCTTCCCACTAC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSGWYAQ*GIPSHY
Trigger: GTAGTGGGAAGGTATACCCCACTGTGCATACCAGCC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTTCTCTGGTGGAGGGCTaGTATGCACAGTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVSLVEG*YAQWGI
Trigger: TATACCCCACTGTGCATACCAGCCCTCCACCAGAGA...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCTCTCTGGTGGAGGGCTaGTATGCACAGTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSSLVEG*YAQWGI
Trigger: TATACCCCACTGTGCATACCAGCCCTCCACCAGAGA...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGGCCGTCGCCGTCTGTaGGGATCCCGGAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRGRRRL*GSRRSL
Trigger: CAGCGACCTCCGGGATCCCCACAGACGGCGACGGCC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAAAATTCTTCCGGTCTaGCAACGTGTCCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVKILPV*QRVPIP
Trigger: CGGGATGGGGACACGTTGCCAGACCGGAAGAATTTT...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACAAAATTCTTCCGGTCTaGCAACGTGTCCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHKILPV*QRVPIP
Trigger: CGGGATGGGGACACGTTGCCAGACCGGAAGAATTTT...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACCAGCCCAAGATGACGTaGAGGCCATGCCGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHQPKMT*RPCRCK
Trigger: TTTACAACGGCATGGCCTCCACGTCATCTTGGGCTG...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTCAGCCCAAGATGACGTaGAGGCCATGCCGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVQPKMT*RPCRCK
Trigger: TTTACAACGGCATGGCCTCCACGTCATCTTGGGCTG...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGCATCTCCCTCTGCCTaGAAACCCTCCACGAGAATG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLASPSA*KPSTRM
Trigger: CATTCTCGTGGAGGGTTTCCAGGCAGAGGGAGATGC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021234.15
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGCTCTGACTCAGACTTaGTGGCATCTCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLALTQT*WHLPLP
Trigger: AGGCAGAGGGAGATGCCACCAAGTCTGAGTCAGAGC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021234.15
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATGCTCTGACTCAGACTTaGTGGCATCTCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDALTQT*WHLPLP
Trigger: AGGCAGAGGGAGATGCCACCAAGTCTGAGTCAGAGC...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000021234.15
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGGTCAAAGGAACTCTTaGCCTCACGTTCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAGQRNS*PHVPRN
Trigger: GTTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGGTCAAAGGAACTCTTaGCCTCACGTTCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWGQRNS*PHVPRN
Trigger: GTTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGGTCAAAGGAACTCTTaGCCTCACGTTCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGGQRNS*PHVPRN
Trigger: GTTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACC...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACAGGGACATCAGAGCCTaGCCCAGGTTGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHRDIRA*PRLSKL
Trigger: CAACTTTGACAACCTGGGCCAGGCTCTGATGTCCCT...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATTTCATGATGGGCTGCTaGTCCACTCCCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDFMMGC*STPTAS
Trigger: GGATGCTGTGGGAGTGGACCAGCAGCCCATCATGAA...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTCATGATGGGCTGCTaGTCCACTCCCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAFMMGC*STPTAS
Trigger: GGATGCTGTGGGAGTGGACCAGCAGCCCATCATGAA...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCAGCATCCAAGGGTTGTaGTTCATGATGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSSIQGL*FMMGCW
Trigger: CCAGCAGCCCATCATGAACCACAACCCTTGGATGCT...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACATGTAGCTGTCATTaGGCAGAGAGTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVTCSCH*AESVSG
Trigger: GCCGGACACACTCTCTGCCCAATGACAGCTACATGT...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCACATGTAGCTGTCATTaGGCAGAGAGTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSTCSCH*AESVSG
Trigger: GCCGGACACACTCTCTGCCCAATGACAGCTACATGT...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACAGTGAACAGACAAGATaGAGCCTGACTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHSEQTR*SLTGLW
Trigger: CCAAAGCCCAGTCAGGCTCCATCTTGTCTGTTCACT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGCAGCTGGTGTCTGCTaGTTGGGAGTGAACAGACAA +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVAAGVC*LGVNRQ
Trigger: TTGTCTGTTCACTCCCAACCAGCAGACACCAGCTGC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGCTGTAGGATGCAGCTaGTGTCTGCTGGTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAAVGCS*CLLVGS
Trigger: ACTCCCAACCAGCAGACACCAGCTGCATCCTACAGC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATGCTGTAGGATGCAGCTaGTGTCTGCTGGTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDAVGCS*CLLVGS
Trigger: ACTCCCAACCAGCAGACACCAGCTGCATCCTACAGC...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGATAGTGTGCATCTTTaGGAAGCTGTAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: VLLSPNSSWCREPWPHWADSVHL*EAVGCS
Trigger: GCTGCATCCTACAGCTTCCCAAAGATGCACACTATC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGATAGTGTGCATCTTTaGGAAGCTGTAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: ACHPSATEEGMRGASWLLDSVHL*EAVGCS
Trigger: GCTGCATCCTACAGCTTCCCAAAGATGCACACTATC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGTTCTTCCTGACTGCTaGGCAGGAGGTCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHVLPDC*AGGLLK
Trigger: TTTCAGGAGACCTCCTGCCCAGCAGTCAGGAAGAAC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGGGATCCAGGTCTGTTaGGTCAGAAGACAAACCAGA +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWGIQVC*VRRQTR
Trigger: TCTGGTTTGTCTTCTGACCCAACAGACCTGGATCCC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGGGATCCAGGTCTGTTaGGTCAGAAGACAAACCAGA +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHGIQVC*VRRQTR
Trigger: TCTGGTTTGTCTTCTGACCCAACAGACCTGGATCCC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGGATCAGCAGGGAGATaGTGTCAAACAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: HSRPPACALQEEGIELDWGSAGR*CQTAVC
Trigger: ACAGACAGCTGTTTGACACCATCTCCCTGCTGATCC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS-3UTR TCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACCAAAGAAGGCAAAGATaGAGTCGTCGAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHQRRQR*SRRRPA
Trigger: TGCAGGCCTTCGACGACTTCATCTTTGCCTTCTTTG...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAAGTATTGGTTCCAGTTaGCACAGGTGGTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLSIGSS*HRWYCW
Trigger: CCAGCAATACCACCTGTGTCAACTGGAACCAATACT...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTAGTATTGGTTCCAGTTaGCACAGGTGGTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSGSPACHPSATEEGMRGSIGSS*HRWYCW
Trigger: CCAGCAATACCACCTGTGTCAACTGGAACCAATACT...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCCATCACAAAGTACATaGTGTCGACCCAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAPSQST*CRPSPP
Trigger: TGGAGGGCTGGGTCGACATCATGTACTTTGTGATGG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGGGCCACTGGGCTGCTaGGCAACCCAGCCCGCACGC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIGPLGC*ATQPAR
Trigger: GCGTGCGGGCTGGGTTGCTCAGCAGCCCAGTGGCCC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGCTTGTGCATGGAGCTaGAGGGCCCAGGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSACAWS*RAQVGC
Trigger: ACATCCCACCTGGGCCCTTCAGCTCCATGCACAAGC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCGGAGGTCGCTGTGCTaGGCGTCCTGTGTGAACTCA +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSRRSLC*ASCVNS
Trigger: TGAGTTCACACAGGACGCTCAGCACAGCGACCTCCG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGAATCTGAAAGACAGTaGCAATGGCCCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAESERQ*QWPRAG
Trigger: CCCTGCTCTGGGCCATTGTCACTGTCTTTCAGATTC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAAAAGAAATCAGGCTCTaGCTCAGACTTGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLKEIRL*LRLGGI
Trigger: GATGCCACCAAGTCTGAGTCAGAGCCTGATTTCTTT...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCAAAGAAATCAGGCTCTaGCTCAGACTTGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAKEIRL*LRLGGI
Trigger: GATGCCACCAAGTCTGAGTCAGAGCCTGATTTCTTT...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGTCATCCTGGCTCTCCTaGCCCTCTCCAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSSSWLS*PSPDSR
Trigger: CCTGCTGTCTGGAGAGGGTCAGGAGAGCCAGGATGA...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACCGCTGGCTGTTCGATaGAGCCCGGGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRPLAVR*SPGTCR
Trigger: CCTGCAGGTGCCCGGGCTTCATCGAACAGCCAGCGG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCCGCTGGCTGTTCGATaGAGCCCGGGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLPLAVR*SPGTCR
Trigger: CCTGCAGGTGCCCGGGCTTCATCGAACAGCCAGCGG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGCGGGCCAAACGCCCTaGAGCCGACTTGCCATTACA +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSAGQTP*SRLAIT
Trigger: TGTAATGGCAAGTCGGCTTCAGGGCGTTTGGCCCGC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATTGGGTGATGATCCGGTaGCACAGGAGACGAAACCTT +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDWVMIR*HRRRNL
Trigger: AAGGTTTCGTCTCCTGTGTCACCGGATCATCACCCA...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCAATGGGTTTGAGGGATaGCATCAGAGTCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTANGFEG*HQSLYH
Trigger: GTGGTAGAGACTCTGATGTCATCCCTCAAACCCATT...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGAATGGGTTTGAGGGATaGCATCAGAGTCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGNGFEG*HQSLYH
Trigger: GTGGTAGAGACTCTGATGTCATCCCTCAAACCCATT...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCCGAAGAACTTCCCTTTaGAGAGCTGCACCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSRRTSL*RAAPQE
Trigger: TTCTTGGGGTGCAGCTCTTCAAAGGGAAGTTCTTCG...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCAAGGGTTGTGGTTCATaGTGGGCTGCTGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLKGCGS*WAAGPL
Trigger: GAGTGGACCAGCAGCCCATCATGAACCACAACCCTT...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATGGGCAGTGAAGCATTaGCCTCAATCTCTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLWAVKH*PQSLPA
Trigger: CGCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCA...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATTGGGCAGTGAAGCATTaGCCTCAATCTCTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDWAVKH*PQSLPA
Trigger: CGCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCA...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGGGGTTGATGGGCAGTaGAGCATTGACCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLGVDGQ*SIDLNL
Trigger: GAGATTGAGGTCAATGCTTCACTGCCCATCAACCCC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAAGTAGATGGGTGAGATaGCGGTGTTGTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLSRWVR*RCCSRW
Trigger: CCACCTGCTACAACACCGTCATCTCACCCATCTACT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATTCTGCTGGTTGGGAGTaGACAGACAAGATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDSAGWE*TDKMEP
Trigger: AGGCTCCATCTTGTCTGTTCACTCCCAACCAGCAGA...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTCTGCTGGTTGGGAGTaGACAGACAAGATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRASAGWE*TDKMEP
Trigger: AGGCTCCATCTTGTCTGTTCACTCCCAACCAGCAGA...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACCCGCCCCAGAAGGATaGGGAGCGGGTCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRPAPEG*GAGQRA
Trigger: TGCCCTCTGACCCGCTCCTCATCCTTCTGGGGCGGG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGACAGGGGTTCTTCCTaGCTGCTGGGCAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSDRGSS*LLGRRS
Trigger: AGACCTCCTGCCCAGCAGTCAGGAAGAACCCCTGTC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCCGGCGCCCTCCTCCTaGGGCAGACGCCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSPAPSS*GRRQDC
Trigger: GCAGTCCTGGCGTCTGCCTCAGGAGGAGGGCGCCGG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGAGTTGACAGGCAGCTaGATACAGCTTAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLELTGS*IQLNCP
Trigger: TGGACAGTTAAGCTGTATTCAGCTGCCTGTCAACTC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCTTCAGACACAATCTCTaGCGTCAGAGACAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSFRHNL*RQRQSL
Trigger: GAGGCTCTGTCTCTGACGTCAGAGATTGTGTCTGAA...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGACCTCGGAGTCCGCGCTaGCCGGGTCCTTTTCCGTCG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRPRSPR*PGPFPS
Trigger: CGACGGAAAAGGACCCGGGCAGCGCGGACTCCGAGG...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGAGAAGCTGACATTCTaGAGGTCCAGCGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLEKLTF*RSSEYS
Trigger: GGAGTACTCGCTGGACCTGCAGAATGTCAGCTTCTC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCTTTGAAGGGGTTGTaGTCGCCTGCAGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESPLKGL*SPAEQL
Trigger: CAACTGCTCTGCAGGCGAGCACAACCCCTTCAAAGG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCCTTTGAAGGGGTTGTaGTCGCCTGCAGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFPLKGL*SPAEQL
Trigger: CAACTGCTCTGCAGGCGAGCACAACCCCTTCAAAGG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCCCTTTGAAGGGGTTGTaGTCGCCTGCAGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLPLKGL*SPAEQL
Trigger: CAACTGCTCTGCAGGCGAGCACAACCCCTTCAAAGG...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGCCTGCGGGCTGCTTTaGGGAGGATGTACACCAGGT +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSACGLL*GGCTPG
Trigger: ACCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGGTGGAGGGCTGGTATaGACAGTGGGGTATACCTTC +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFGGGLV*TVGYTF
Trigger: GAAGGTATACCCCACTGTGCATACCAGCCCTCCACC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGGTGGAGGGCTGGTATaGACAGTGGGGTATACCTTC +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESGGGLV*TVGYTF
Trigger: GAAGGTATACCCCACTGTGCATACCAGCCCTCCACC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAAGGGCTGGAGATTTTaGAGGAGCTATGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDKGWRF*RSYGRL
Trigger: GAGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTT...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTATTGCAACCAAAAAGGTaGATGCCCAGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLLQPKR*MPRMLK
Trigger: CTTCAGCATCCTGGGCATGCACCTTTTTGGTTGCAA...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCTTGCAACCAAAAAGGTaGATGCCCAGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTALQPKR*MPRMLK
Trigger: CTTCAGCATCCTGGGCATGCACCTTTTTGGTTGCAA...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGTTGCAACCAAAAAGGTaGATGCCCAGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RWVVIHSRPPACALQEEGLQPKR*MPRMLK
Trigger: CTTCAGCATCCTGGGCATGCACCTTTTTGGTTGCAA...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCTTCCCCCACACCTGTaGTGGAGCTCTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSLPPHL*WSSWAV
Trigger: CACTGCCCAAGAGCTCCAGCACAGGTGTGGGGGAAG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCCCCTTTGCTCAGGTTaGCCTCATCATCGCCATCAT +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAPLCSG*PHHRHH
Trigger: ATGATGGCGATGATGAGGGCAACCTGAGCAAAGGGG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACTTCAGCCAGGAAGACTaGCGTGAAGATGTAGTTGGA +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHFSQED*REDVVG
Trigger: TCCAACTACATCTTCACGGCAGTCTTCCTGGCTGAA...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCTTCAGCCAGGAAGACTaGCGTGAAGATGTAGTTGGA +
Preference number: 4 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAFSQED*REDVVG
Trigger: TCCAACTACATCTTCACGGCAGTCTTCCTGGCTGAA...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCTGCCGAGAATCTTGGTaGCGCTGTCAGAGACCATGG +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLCRESW*RCQRPW
Trigger: CCATGGTCTCTGACAGCGGCACCAAGATTCTCGGCA...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCTGCCGAGAATCTTGGTaGCGCTGTCAGAGACCATGG +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESCRESW*RCQRPW
Trigger: CCATGGTCTCTGACAGCGGCACCAAGATTCTCGGCA...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGCAGCACCCTCAGCATaGCGAGAATCTTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSAAPSA*RESWCR
Trigger: GCGGCACCAAGATTCTCGGCATGCTGAGGGTGCTGC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGGTACCATCGTGGGGTaGTCAAGGGAGAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESGTIVG*SREKPE
Trigger: TTCAGGCTTCTCCCTTGAGCACCCCACGATGGTACC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGGTACCATCGTGGGGTaGTCAAGGGAGAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFGTIVG*SREKPE
Trigger: TTCAGGCTTCTCCCTTGAGCACCCCACGATGGTACC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGGTACCATCGTGGGGTaGTCAAGGGAGAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLGTIVG*SREKPE
Trigger: TTCAGGCTTCTCCCTTGAGCACCCCACGATGGTACC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGGCAGTGCTCCCATTaGGGCACATGTAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESRQCSH*GTCSCH
Trigger: ATGACAGCTACATGTGCCGCAATGGGAGCACTGCCG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATGATGCAGCTGGTGTCTaGTGGTTGGGAGTGAACAGA +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDDAAGV*WLGVNR
Trigger: TCTGTTCACTCCCAACCAGCAGACACCAGCTGCATC...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGATGCAGCTGGTGTCTaGTGGTTGGGAGTGAACAGA +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRADAAGV*WLGVNR
Trigger: TCTGTTCACTCCCAACCAGCAGACACCAGCTGCATC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGATGCAGCTGGTGTCTaGTGGTTGGGAGTGAACAGA +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLDAAGV*WLGVNR
Trigger: TCTGTTCACTCCCAACCAGCAGACACCAGCTGCATC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTTGTCCAGCTCTAAGCTaGTTCTGGTCTCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVCPALS*FWSLEG
Trigger: ACCCTCAAGAGACCAGAAGCAGCTTAGAGCTGGACA...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCTGTCCAGCTCTAAGCTaGTTCTGGTCTCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSCPALS*FWSLEG
Trigger: ACCCTCAAGAGACCAGAAGCAGCTTAGAGCTGGACA...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTTGCCGATTTCCTCTaGCTGGAAACCCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAFADFL*LETLHE
Trigger: CTCGTGGAGGGTTTCCAGGCAGAGGAAATCGGCAAA...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGTCCAGACCGCAGGGTaGACCACCACCGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRVQTAG*TTTAFP
Trigger: GGGGAAGGCGGTGGTGGTCCACCCTGCGGTCTGGAC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATCCAGTGTGATGACCTaGAAGATGGCGATCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLSSVMT*KMAIQA
Trigger: TGCCTGGATCGCCATCTTCCAGGTCATCACACTGGA...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCCCACCACGGGCCACTaGGCTGCTGAGCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLPTTGH*AAEQPS
Trigger: GCTGGGTTGCTCAGCAGCCCAGTGGCCCGTGGTGGG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACAGCTGCCACTGGGCTaGGGCTCCTGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIQLPLG*GSCPPR
Trigger: CCGTGGTGGGCAGGAGCCCCAGCCCAGTGGCAGCTG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGAGAGCAGCTGCCACTaGGCTGGGGCTCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRESSCH*AGAPAH
Trigger: GTGGGCAGGAGCCCCAGCCCAGTGGCAGCTGCTCTC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTCTCTGGTGGAGGGCTaGTATGCACAGTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRASLVEG*YAQWGI
Trigger: TATACCCCACTGTGCATACCAGCCCTCCACCAGAGA...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAAAAATTCTTCCGGTCTaGCAACGTGTCCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLKILPV*QRVPIP
Trigger: CGGGATGGGGACACGTTGCCAGACCGGAAGAATTTT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAAAATTCTTCCGGTCTaGCAACGTGTCCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDKILPV*QRVPIP
Trigger: CGGGATGGGGACACGTTGCCAGACCGGAAGAATTTT...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCAGCCCAAGATGACGTaGAGGCCATGCCGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDQPKMT*RPCRCK
Trigger: TTTACAACGGCATGGCCTCCACGTCATCTTGGGCTG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGCATCTCCCTCTGCCTaGAAACCCTCCACGAGAATG +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLASPSA*KPSTRM
Trigger: CATTCTCGTGGAGGGTTTCCAGGCAGAGGGAGATGC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000021234.15
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGGCTGGAGCGCCTGCTaGTCCAGCTGCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLGWSAC*SSCLLR
Trigger: GCGCAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACCAGGCTGTTCCGGCTaGAGCGCCTGCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRPGCSG*SACWSS
Trigger: GCTGGACCAGCAGGCGCTCCAGCCGGAACAGCCTGG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGGTCAAAGGAACTCTTaGCCTCACGTTCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHGQRNS*PHVPRN
Trigger: GTTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGCATGCCGAGAATCTTaGTGCCGCTGTCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLACRES*CRCQRP
Trigger: TGGTCTCTGACAGCGGCACCAAGATTCTCGGCATGC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAAGGGACATCAGAGCCTaGCCCAGGTTGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLRDIRA*PRLSKL
Trigger: CAACTTTGACAACCTGGGCCAGGCTCTGATGTCCCT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAAGCATCCAAGGGTTGTaGTTCATGATGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLSIQGL*FMMGCW
Trigger: CCAGCAGCCCATCATGAACCACAACCCTTGGATGCT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCAGCATCCAAGGGTTGTaGTTCATGATGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRASIQGL*FMMGCW
Trigger: CCAGCAGCCCATCATGAACCACAACCCTTGGATGCT...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGTGGCTGGTACACAGGTaGTGGACGAGGAGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSWLVHR*WTRSRK
Trigger: CTTCCGGCTCCTCGTCCACCACCTGTGTACCAGCCA...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATACATGTAGCTGTCATTaGGCAGAGAGTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDTCSCH*AESVSG
Trigger: GCCGGACACACTCTCTGCCCAATGACAGCTACATGT...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAACATGTAGCTGTCATTaGGCAGAGAGTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLTCSCH*AESVSG
Trigger: GCCGGACACACTCTCTGCCCAATGACAGCTACATGT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCACATGTAGCTGTCATTaGGCAGAGAGTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRATCSCH*AESVSG
Trigger: GCCGGACACACTCTCTGCCCAATGACAGCTACATGT...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAAGATGGAGCCTGACTaGGCTTTGGGGAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSKMEPD*ALGSPQ
Trigger: CTGGGGGCTCCCCAAAGCCCAGTCAGGCTCCATCTT...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACAGTGAACAGACAAGATaGAGCCTGACTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHSEQTR*SLTGLW
Trigger: CCAAAGCCCAGTCAGGCTCCATCTTGTCTGTTCACT...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGCAGCTGGTGTCTGCTaGTTGGGAGTGAACAGACAA +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLAAGVC*LGVNRQ
Trigger: TTGTCTGTTCACTCCCAACCAGCAGACACCAGCTGC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGCTGGGTTCCAGGCCTaGGCAAGGGGCTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIAGFQA*ARGWQA
Trigger: CGCCTGCCAGCCCCTTGCCCAGGCCTGGAACCCAGC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGCTGGGTTCCAGGCCTaGGCAAGGGGCTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYAGFQA*ARGWQA
Trigger: CGCCTGCCAGCCCCTTGCCCAGGCCTGGAACCCAGC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGCTCTAAGCTGCTTCTaGTCTCTTGAGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAALSCF*SLEGPW
Trigger: CCAAGGACCCTCAAGAGACCAGAAGCAGCTTAGAGC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGTTCTTCCTGACTGCTaGGCAGGAGGTCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLVLPDC*AGGLLK
Trigger: TTTCAGGAGACCTCCTGCCCAGCAGTCAGGAAGAAC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGACGCCAGGACTGCATaGGGGCCGAGGGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIDARTA*GPRALA
Trigger: AGCCAGGGCCCTCGGCCCCCATGCAGTCCTGGCGTC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACGCCAGGACTGCATaGGGGCCGAGGGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILDARTA*GPRALA
Trigger: AGCCAGGGCCCTCGGCCCCCATGCAGTCCTGGCGTC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCAAAGAAGGCAAAGATaGAGTCGTCGAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAQRRQR*SRRRPA
Trigger: TGCAGGCCTTCGACGACTTCATCTTTGCCTTCTTTG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCAAAGAAGGCAAAGATaGAGTCGTCGAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDQRRQR*SRRRPA
Trigger: TGCAGGCCTTCGACGACTTCATCTTTGCCTTCTTTG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCCATCACAAAGTACATaGTGTCGACCCAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFPSQST*CRPSPP
Trigger: TGGAGGGCTGGGTCGACATCATGTACTTTGTGATGG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAAGGGTGGTGGCAGCATaGGCCAGCGGGACCCATTGG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRRVVAA*ASGTHW
Trigger: CCAATGGGTCCCGCTGGCTCATGCTGCCACCACCCT...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCACAGCCTCACTGTCTaGGTCAGGCATTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESHSLTV*VRHFMV
Trigger: GACCATGAAATGCCTGACTCAGACAGTGAGGCTGTG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCACAGCCTCACTGTCTaGGTCAGGCATTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFHSLTV*VRHFMV
Trigger: GACCATGAAATGCCTGACTCAGACAGTGAGGCTGTG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGAATCTGAAAGACAGTaGCAATGGCCCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLESERQ*QWPRAG
Trigger: CCCTGCTCTGGGCCATTGTCACTGTCTTTCAGATTC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAAAGAAATCAGGCTCTaGCTCAGACTTGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVKEIRL*LRLGGI
Trigger: GATGCCACCAAGTCTGAGTCAGAGCCTGATTTCTTT...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCTGGGTGATGATCCGGTaGCACAGGAGACGAAACCTT +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLWVMIR*HRRRNL
Trigger: AAGGTTTCGTCTCCTGTGTCACCGGATCATCACCCA...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAATGGGTTTGAGGGATaGCATCAGAGTCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVNGFEG*HQSLYH
Trigger: GTGGTAGAGACTCTGATGTCATCCCTCAAACCCATT...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCTGGGCAGTGAAGCATTaGCCTCAATCTCTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLWAVKH*PQSLPA
Trigger: CGCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCA...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGGGGTTGATGGGCAGTaGAGCATTGACCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFGVDGQ*SIDLNL
Trigger: GAGATTGAGGTCAATGCTTCACTGCCCATCAACCCC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCAGTAGATGGGTGAGATaGCGGTGTTGTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESSRWVR*RCCSRW
Trigger: CCACCTGCTACAACACCGTCATCTCACCCATCTACT...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCACGAAGTAGATGGGTaGGATGACGGTGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDHEVDG*DDGVVA
Trigger: TGCTACAACACCGTCATCTCACCCATCTACTTCGTG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCACGAAGTAGATGGGTaGGATGACGGTGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAHEVDG*DDGVVA
Trigger: TGCTACAACACCGTCATCTCACCCATCTACTTCGTG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTTCTGCTGGTTGGGAGTaGACAGACAAGATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFSAGWE*TDKMEP
Trigger: AGGCTCCATCTTGTCTGTTCACTCCCAACCAGCAGA...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTGCTGCCTGGCGCCTaGGAGGCCTCTGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRLLPGA*EASEPE
Trigger: CTCTGGCTCAGAGGCCTCTCAGGCGCCAGGCAGCAA...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACCCGCCCCAGAAGGATaGGGAGCGGGTCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIPAPEG*GAGQRA
Trigger: TGCCCTCTGACCCGCTCCTCATCCTTCTGGGGCGGG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCCCGCCCCAGAAGGATaGGGAGCGGGTCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYPAPEG*GAGQRA
Trigger: TGCCCTCTGACCCGCTCCTCATCCTTCTGGGGCGGG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGTTTCTTTGGGGAGGGTaGGGCAGCCGTGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSFLWGG*GSRAVK
Trigger: CTTGACAGCACGGCTGCCTCACCCTCCCCAAAGAAA...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGAGTTGACAGGCAGCTaGATACAGCTTAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSELTGS*IQLNCP
Trigger: TGGACAGTTAAGCTGTATTCAGCTGCCTGTCAACTC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGAGAAGCTGACATTCTaGAGGTCCAGCGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESEKLTF*RSSEYS
Trigger: GGAGTACTCGCTGGACCTGCAGAATGTCAGCTTCTC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGAGAAGCTGACATTCTaGAGGTCCAGCGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFEKLTF*RSSEYS
Trigger: GGAGTACTCGCTGGACCTGCAGAATGTCAGCTTCTC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGGGGTTGTGCTCGCCTaGAGAGCAGTTGGTATAGTA +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESGVVLA*RAVGIV
Trigger: TACTATACCAACTGCTCTGCAGGCGAGCACAACCCC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCTGGCTCAGAGAAGCTTaGCAGGGTGCTAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESWLREA*QGASIG
Trigger: TCCAATGCTAGCACCCTGGCAAGCTTCTCTGAGCCA...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTAAGGGCTGGAGATTTTaGAGGAGCTATGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFKGWRF*RSYGRL
Trigger: GAGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTT...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGACCACGAGCTGCCGCTaGAGTGCCGGCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLTTSCR*SAGRKR
Trigger: TCGCTTCCTGCCGGCACTGCAGCGGCAGCTCGTGGT...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGCGCTCCAGGGACTGTaGGGGGAGCTTCGGGCACTT +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLALQGL*GELRAL
Trigger: AAGTGCCCGAAGCTCCCCGCACAGTCCCTGGAGCGC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGGTCCAGCTGCTTGCTaGGCTCCAGGGACTGTGCGG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRGPAAC*APGTVR
Trigger: CCGCACAGTCCCTGGAGCGCAGCAAGCAGCTGGACC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGCGATGATCACTGCCTaGTGGGCTGGCCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRAMITA*WAGPVL
Trigger: GAGGACCGGGCCAGCCCAGCAGGCAGTGATCATCGC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCCCCCTTTGCTCAGGTTaGCCTCATCATCGCCATCAT +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLPLCSG*PHHRHH
Trigger: ATGATGGCGATGATGAGGGCAACCTGAGCAAAGGGG...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCCCTTTGCTCAGGTTaGCCTCATCATCGCCATCAT +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESPLCSG*PHHRHH
Trigger: ATGATGGCGATGATGAGGGCAACCTGAGCAAAGGGG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCCCCTTTGCTCAGGTTaGCCTCATCATCGCCATCAT +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFPLCSG*PHHRHH
Trigger: ATGATGGCGATGATGAGGGCAACCTGAGCAAAGGGG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCAAAGCACCAGCCCAGTaGCACCACCTTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLKAPAQ*HHLHCH
Trigger: ATGACAGTGAAGGTGGTGGCACTGGGCTGGTGCTTT...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCAGAGTAGTAGGGTTTaGACTGGGCTTCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESQSSRV*TGLLTQ
Trigger: CTGCGTCAGAAGCCCAGTGCAAACCCTACTACTCTG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107789.8
ENSMUST00000107790.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTGCTCTCTTCCAGGTaGTTCATCAGCACGGCTATG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLLLSSR*FISTAM
Trigger: CATAGCCGTGCTGATGAAGCACCTGGAAGAGAGCAA...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATGTCCAGCTCTAAGCTaGTTCTGGTCTCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLCPALS*FWSLEG
Trigger: ACCCTCAAGAGACCAGAAGCAGCTTAGAGCTGGACA...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCGGCAGACGCCAGGACTaGATGGGGGCCGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSGRRQD*MGAEGP
Trigger: AGGGCCCTCGGCCCCCATGCAGTCCTGGCGTCTGCC...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCTTCCCCGCGCAGTGTaGGCACGCTCCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLLPRAV*ARSCRI
Trigger: GATCCTGCAGGAGCGTGCCCACACTGCGCGGGGAAG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGTCCAGACCGCAGGGTaGACCACCACCGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYVQTAG*TTTAFP
Trigger: GGGGAAGGCGGTGGTGGTCCACCCTGCGGTCTGGAC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTTCCAGTGTGATGACCTaGAAGATGGCGATCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFSSVMT*KMAIQA
Trigger: TGCCTGGATCGCCATCTTCCAGGTCATCACACTGGA...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGACTCTCCCGTTGCTTaGTCTCAGAGAACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFDSPVA*SQRTVW
Trigger: CCACACAGTTCTCTGAGACCAAGCAACGGGAGAGTC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACCCACCACGGGCCACTaGGCTGCTGAGCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILPTTGH*AAEQPS
Trigger: GCTGGGTTGCTCAGCAGCCCAGTGGCCCGTGGTGGG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCAGCTGCCACTGGGCTaGGGCTCCTGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFQLPLG*GSCPPR
Trigger: CCGTGGTGGGCAGGAGCCCCAGCCCAGTGGCAGCTG...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCAGCTGCCACTGGGCTaGGGCTCCTGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIQLPLG*GSCPPR
Trigger: CCGTGGTGGGCAGGAGCCCCAGCCCAGTGGCAGCTG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGAGCAGCTGCCACTaGGCTGGGGCTCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILESSCH*AGAPAH
Trigger: GTGGGCAGGAGCCCCAGCCCAGTGGCAGCTGCTCTC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGAGAGCAGCTGCCACTaGGCTGGGGCTCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIESSCH*AGAPAH
Trigger: GTGGGCAGGAGCCCCAGCCCAGTGGCAGCTGCTCTC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGGGGGTAGAGGGTGGTaGCAGCATGAGCCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRGGRGW*QHEPAG
Trigger: TCCCGCTGGCTCATGCTGCCACCACCCTCTACCCCC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGGGGGTAGAGGGTGGTaGCAGCATGAGCCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRGGRGW*QHEPAG
Trigger: TCCCGCTGGCTCATGCTGCCACCACCCTCTACCCCC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTTCTCTGGTGGAGGGCTaGTATGCACAGTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFSLVEG*YAQWGI
Trigger: TATACCCCACTGTGCATACCAGCCCTCCACCAGAGA...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCATCCTTCAGCATCTCTaGTGGAGGGCTGGTATGCAC +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESILQHL*WRAGMH
Trigger: GTGCATACCAGCCCTCCACCAGAGATGCTGAAGGAT...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGACTAGGCTCTGCATCTaGGCCCAGGCTCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLTRLCI*AQARPS
Trigger: CGACGGCCGAGCCTGGGCCCAGATGCAGAGCCTAGT...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAACTAGGCTCTGCATCTaGGCCCAGGCTCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRTRLCI*AQARPS
Trigger: CGACGGCCGAGCCTGGGCCCAGATGCAGAGCCTAGT...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTAAAATTCTTCCGGTCTaGCAACGTGTCCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFKILPV*QRVPIP
Trigger: CGGGATGGGGACACGTTGCCAGACCGGAAGAATTTT...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGGCTGGAGCGCCTGCTaGTCCAGCTGCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIGWSAC*SSCLLR
Trigger: GCGCAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCCTCCGCTCCCCGCTTaGGCTCCTACGCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLPPLPA*APTLQA
Trigger: AGCCTGAAGCGTAGGAGCCCAAGCGGGGAGCGGAGG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGGTCAAAGGAACTCTTaGCCTCACGTTCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLGQRNS*PHVPRN
Trigger: GTTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCAGGGACATCAGAGCCTaGCCCAGGTTGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLRDIRA*PRLSKL
Trigger: CAACTTTGACAACCTGGGCCAGGCTCTGATGTCCCT...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCGGTGTTGTAGCAGGTaGACTCCTGGTCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSRCCSR*TPGHSP
Trigger: GGGACTGTGACCAGGAGTCCACCTGCTACAACACCG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAAGTGAACAGACAAGATaGAGCCTGACTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLSEQTR*SLTGLW
Trigger: CCAAAGCCCAGTCAGGCTCCATCTTGTCTGTTCACT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGCAGCTGGTGTCTGCTaGTTGGGAGTGAACAGACAA +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLAAGVC*LGVNRQ
Trigger: TTGTCTGTTCACTCCCAACCAGCAGACACCAGCTGC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGCAGCTGGTGTCTGCTaGTTGGGAGTGAACAGACAA +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFAAGVC*LGVNRQ
Trigger: TTGTCTGTTCACTCCCAACCAGCAGACACCAGCTGC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGATAGTGTGCATCTTTaGGAAGCTGTAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVDSVHL*EAVGCS
Trigger: GCTGCATCCTACAGCTTCCCAAAGATGCACACTATC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGATAGTGTGCATCTTTaGGAAGCTGTAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSDSVHL*EAVGCS
Trigger: GCTGCATCCTACAGCTTCCCAAAGATGCACACTATC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGCCTGGGCAAGGGGCTaGCAGGCGGATGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLAWARG*QADVLG
Trigger: TCCAAGCACATCCGCCTGCCAGCCCCTTGCCCAGGC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGCCTGGGCAAGGGGCTaGCAGGCGGATGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRAWARG*QADVLG
Trigger: TCCAAGCACATCCGCCTGCCAGCCCCTTGCCCAGGC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGCTGGGTTCCAGGCCTaGGCAAGGGGCTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIAGFQA*ARGWQA
Trigger: CGCCTGCCAGCCCCTTGCCCAGGCCTGGAACCCAGC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGCTCTAAGCTGCTTCTaGTCTCTTGAGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESALSCF*SLEGPW
Trigger: CCAAGGACCCTCAAGAGACCAGAAGCAGCTTAGAGC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGTTCTTCCTGACTGCTaGGCAGGAGGTCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLVLPDC*AGGLLK
Trigger: TTTCAGGAGACCTCCTGCCCAGCAGTCAGGAAGAAC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGGACATAGGCGGGGCTaGGAGCCGCTGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIGHRRG*EPLSRQ
Trigger: CTGCCTGGACAGCGGCTCCCAGCCCCGCCTATGTCC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGGACATAGGCGGGGCTaGGAGCCGCTGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYGHRRG*EPLSRQ
Trigger: CTGCCTGGACAGCGGCTCCCAGCCCCGCCTATGTCC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCCAAAGAAGGCAAAGATaGAGTCGTCGAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLQRRQR*SRRRPA
Trigger: TGCAGGCCTTCGACGACTTCATCTTTGCCTTCTTTG...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCAAAGAAGGCAAAGATaGAGTCGTCGAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESQRRQR*SRRRPA
Trigger: TGCAGGCCTTCGACGACTTCATCTTTGCCTTCTTTG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAAGTATTGGTTCCAGTTaGCACAGGTGGTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLSIGSS*HRWYCW
Trigger: CCAGCAATACCACCTGTGTCAACTGGAACCAATACT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTTGTACACCAGGTACTTaGGAAGCTCCTCATAGCAGC +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFCTPGT*EAPHSS
Trigger: GCTGCTATGAGGAGCTTCTCAAGTACCTGGTGTACA...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCTGTACACCAGGTACTTaGGAAGCTCCTCATAGCAGC +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLCTPGT*EAPHSS
Trigger: GCTGCTATGAGGAGCTTCTCAAGTACCTGGTGTACA...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGATTTCCAGGGCGTTGGTaGGCTCCTCGGGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRFPGRW*APRAAR
Trigger: ACGAGCAGCCCGAGGAGCTCACCAACGCCCTGGAAA...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGAACCCCTGTGGCGATaGTCACTGCCTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRREPLWR*SLPAGL
Trigger: CAGCCCAGCAGGCAGTGATCATCGCCACAGGGGTTC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCCAGGAGACGAAACCTTaGCTGGGGAGGGAAGATATA +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLQETKP*LGREDI
Trigger: TATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTG...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCAGGAGACGAAACCTTaGCTGGGGAGGGAAGATATA +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFQETKP*LGREDI
Trigger: TATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCAGGAGACGAAACCTTaGCTGGGGAGGGAAGATATA +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESQETKP*LGREDI
Trigger: TATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCAATGGGTTTGAGGGATaGCATCAGAGTCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRANGFEG*HQSLYH
Trigger: GTGGTAGAGACTCTGATGTCATCCCTCAAACCCATT...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCCGAAGAACTTCCCTTTaGAGAGCTGCACCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLRRTSL*RAAPQE
Trigger: TTCTTGGGGTGCAGCTCTTCAAAGGGAAGTTCTTCG...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGAAGAACTTCCCTTTaGAGAGCTGCACCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESRRTSL*RAAPQE
Trigger: TTCTTGGGGTGCAGCTCTTCAAAGGGAAGTTCTTCG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCTCAAGGGAGAAGCCTaGAGAGGCTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSLKGEA*RGCSNV
Trigger: CACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGGGCCCACTCACCTCTaGCAACAGGTCTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRGPTHL*QQVFPA
Trigger: AGCCGGGAAGACCTGTTGTCAGAGGTGAGTGGGCCC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCCCGCCCCAGAAGGATaGGGAGCGGGTCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSPAPEG*GAGQRA
Trigger: TGCCCTCTGACCCGCTCCTCATCCTTCTGGGGCGGG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACGCTGTCCAGGCAGCTaGCAGCGATGGAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRRCPGS*QRWSVS
Trigger: GGAGACACTCCATCGCTGTCAGCTGCCTGGACAGCG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCGCTGTCCAGGCAGCTaGCAGCGATGGAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLRCPGS*QRWSVS
Trigger: GGAGACACTCCATCGCTGTCAGCTGCCTGGACAGCG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCCTCGGAGTCCGCGCTaGCCGGGTCCTTTTCCGTCG +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSPRSPR*PGPFPS
Trigger: CGACGGAAAAGGACCCGGGCAGCGCGGACTCCGAGG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCTCGGAGTCCGCGCTaGCCGGGTCCTTTTCCGTCG +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFPRSPR*PGPFPS
Trigger: CGACGGAAAAGGACCCGGGCAGCGCGGACTCCGAGG...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGACGGGTTACAGACCGTaGGGAGACACCAGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLTGYRP*GDTSSA
Trigger: CGCGGAGCTGGTGTCTCCGCACGGTCTGTAACCCGT...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAACGGGTTACAGACCGTaGGGAGACACCAGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRTGYRP*GDTSSA
Trigger: CGCGGAGCTGGTGTCTCCGCACGGTCTGTAACCCGT...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGGCCAGCCTGCGGGCTaGTTTGCGGAGGATGTACAC +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRGQPAG*FAEDVH
Trigger: GTGTACATCCTCCGCAAAGCAGCCCGCAGGCTGGCC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGGCCAGCCTGCGGGCTaGTTTGCGGAGGATGTACAC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRGQPAG*FAEDVH
Trigger: GTGTACATCCTCCGCAAAGCAGCCCGCAGGCTGGCC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACACAGTCCTGCCAGATaGCTCCGATGGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRHSPAR*LRWGPG
Trigger: CCCAGGTCCCCATCGGAGGCATCTGGCAGGACTGTG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGGACTCTGGCTCCCCTaGTCCTGTCCGGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLGLWLP*SCPGTV
Trigger: TACTGTGCCCGGACAGGAGCAGGGGAGCCAGAGTCC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGACAGGCCACCTCCCTaGTGGCCCACAATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRDRPPP*WPTISH
Trigger: GTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCTGTC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGACAGGCCACCTCCCTaGTGGCCCACAATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRDRPPP*WPTISH
Trigger: GTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCTGTC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGCAACCAAAAAGGTaGATGCCCAGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRALQPKR*MPRMLK
Trigger: CTTCAGCATCCTGGGCATGCACCTTTTTGGTTGCAA...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTGCAACCAAAAAGGTaGATGCCCAGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLLQPKR*MPRMLK
Trigger: CTTCAGCATCCTGGGCATGCACCTTTTTGGTTGCAA...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGCGCTCCAGGGACTGTaGGGGGAGCTTCGGGCACTT +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILALQGL*GELRAL
Trigger: AAGTGCCCGAAGCTCCCCGCACAGTCCCTGGAGCGC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGCCTGCTGGTCCAGCTaGTTGCTGCGCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYACWSS*LLRSRD
Trigger: GTCCCTGGAGCGCAGCAAGCAGCTGGACCAGCAGGC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTATCCGGCTGGAGCGCCTaGTGGTCCAGCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILSGWSA*WSSCLL
Trigger: CAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCCGGA...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCCGGCTGGAGCGCCTaGTGGTCCAGCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSISGWSA*WSSCLL
Trigger: CAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCCGGA...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTCAGCCAGGAAGACTaGCGTGAAGATGTAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SRPPACALQEEGIELDWLFSQED*REDVVG
Trigger: TCCAACTACATCTTCACGGCAGTCTTCCTGGCTGAA...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGTGCCGAGAATCTTGGTaGCGCTGTCAGAGACCATGG +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSCRESW*RCQRPW
Trigger: CCATGGTCTCTGACAGCGGCACCAAGATTCTCGGCA...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCAGCGCTGGCTGAGCTaGCGGAAGCAATTACATCGT +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSQRWLS*RKQLHR
Trigger: ACGATGTAATTGCTTCCGGCAGCTCAGCCAGCGCTG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107789.8
ENSMUST00000107790.8
CDS-3UTR GCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACACCGTGTCCAGCAGTaGCCGCATGCCCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRHRVQQ*PHAHSH
Trigger: ATGGCTGTGGGCATGCGGGCACTGCTGGACACGGTG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCGGCAGTGCTCCCATTaGGGCACATGTAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSRQCSH*GTCSCH
Trigger: ATGACAGCTACATGTGCCGCAATGGGAGCACTGCCG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACTTCCCCGCGCAGTGTaGGCACGCTCCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSILPRAV*ARSCRI
Trigger: GATCCTGCAGGAGCGTGCCCACACTGCGCGGGGAAG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGAGAGCAGCTGCCACTaGGCTGGGGCTCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIESSCH*AGAPAH
Trigger: GTGGGCAGGAGCCCCAGCCCAGTGGCAGCTGCTCTC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTGGCATCCCTGTCCTaGATCTCTGGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRLASLS*ISGLAR
Trigger: CCGGGCCAGCCCAGAGATCCAGGACAGGGATGCCAA...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGATTGGCATCCCTGTCCTaGATCTCTGGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRLASLS*ISGLAR
Trigger: CCGGGCCAGCCCAGAGATCCAGGACAGGGATGCCAA...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAAGTGGGGGTAGAGGGTaGTGGCAGCATGAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRSGGRG*WQHEPA
Trigger: CGCTGGCTCATGCTGCCACCACCCTCTACCCCCACT...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACGCCTGGCAACGGACTaGCTCCAAGTGGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRRLATD*LQVAVS
Trigger: GCTGACTGCCACTTGGAGCCAGTCCGTTGCCAGGCG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCGCCTGGCAACGGACTaGCTCCAAGTGGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLRLATD*LQVAVS
Trigger: GCTGACTGCCACTTGGAGCCAGTCCGTTGCCAGGCG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGACGCCTGGCAACGGACTaGCTCCAAGTGGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRRLATD*LQVAVS
Trigger: GCTGACTGCCACTTGGAGCCAGTCCGTTGCCAGGCG...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGCTCTGACTCAGACTTaGTGGCATCTCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSALTQT*WHLPLP
Trigger: AGGCAGAGGGAGATGCCACCAAGTCTGAGTCAGAGC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGGCTGGAGCGCCTGCTaGTCCAGCTGCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIGWSAC*SSCLLR
Trigger: GCGCAGCAAGCAGCTGGACCAGCAGGCGCTCCAGCC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCCAGGCTGTTCCGGCTaGAGCGCCTGCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSPGCSG*SACWSS
Trigger: GCTGGACCAGCAGGCGCTCCAGCCGGAACAGCCTGG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCCTCCGCTCCCCGCTTaGGCTCCTACGCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYPPLPA*APTLQA
Trigger: AGCCTGAAGCGTAGGAGCCCAAGCGGGGAGCGGAGG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGTTCATGATGGGCTGCTaGTCCACTCCCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSFMMGC*STPTAS
Trigger: GGATGCTGTGGGAGTGGACCAGCAGCCCATCATGAA...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACTGGTACACAGGTGGTaGACGAGGAGCCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRLVHRW*TRSRKR
Trigger: GCGCTTCCGGCTCCTCGTCCACCACCTGTGTACCAG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCTGGTACACAGGTGGTaGACGAGGAGCCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLLVHRW*TRSRKR
Trigger: GCGCTTCCGGCTCCTCGTCCACCACCTGTGTACCAG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGAGGCTGCTCCAATGTaGGCCGTGGTGTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTREAAPM*AVVCGA
Trigger: GGCTCCACACACCACGGCCCACATTGGAGCAGCCTC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTAGTGAACAGACAAGATaGAGCCTGACTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFSEQTR*SLTGLW
Trigger: CCAAAGCCCAGTCAGGCTCCATCTTGTCTGTTCACT...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGCTGTAGGATGCAGCTaGTGTCTGCTGGTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSAVGCS*CLLVGS
Trigger: ACTCCCAACCAGCAGACACCAGCTGCATCCTACAGC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGATAGTGTGCATCTTTaGGAAGCTGTAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: EILHKRIAFSQQLLVSRADSVHL*EAVGCS
Trigger: GCTGCATCCTACAGCTTCCCAAAGATGCACACTATC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGCCTGGGCAAGGGGCTaGCAGGCGGATGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYAWARG*QADVLG
Trigger: TCCAAGCACATCCGCCTGCCAGCCCCTTGCCCAGGC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCGGACATAGGCGGGGCTaGGAGCCGCTGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSGHRRG*EPLSRQ
Trigger: CTGCCTGGACAGCGGCTCCCAGCCCCGCCTATGTCC...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGGACATAGGCGGGGCTaGGAGCCGCTGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIGHRRG*EPLSRQ
Trigger: CTGCCTGGACAGCGGCTCCCAGCCCCGCCTATGTCC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGTGCTGTCAAGGGGGCTaGAGGCCGAGGGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLCCQGG*RPRDPS
Trigger: CGAAGGATCCCTCGGCCTCCAGCCCCCTTGACAGCA...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGATGCTGTCAAGGGGGCTaGAGGCCGAGGGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRCCQGG*RPRDPS
Trigger: CGAAGGATCCCTCGGCCTCCAGCCCCCTTGACAGCA...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGGGATCCAGGTCTGTTaGGTCAGAAGACAAACCAGA +
Preference number: 4 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLGIQVC*VRRQTR
Trigger: TCTGGTTTGTCTTCTGACCCAACAGACCTGGATCCC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACCGTTCTCCCGAGGCTaGGAGCAGATGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILPFSRG*EQMKGL
Trigger: GAGCCCCTTCATCTGCTCTCAGCCTCGGGAGAACGG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCAGGGTGGTGGCAGCATaGGCCAGCGGGACCCATTGG +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFRVVAA*ASGTHW
Trigger: CCAATGGGTCCCGCTGGCTCATGCTGCCACCACCCT...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTAGGGTGGTGGCAGCATaGGCCAGCGGGACCCATTGG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIRVVAA*ASGTHW
Trigger: CCAATGGGTCCCGCTGGCTCATGCTGCCACCACCCT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCAGGGTGGTGGCAGCATaGGCCAGCGGGACCCATTGG +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSRVVAA*ASGTHW
Trigger: CCAATGGGTCCCGCTGGCTCATGCTGCCACCACCCT...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATTTTCCAGGGCGTTGGTaGGCTCCTCGGGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYFPGRW*APRAAR
Trigger: ACGAGCAGCCCGAGGAGCTCACCAACGCCCTGGAAA...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGAATCTGAAAGACAGTaGCAATGGCCCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSESERQ*QWPRAG
Trigger: CCCTGCTCTGGGCCATTGTCACTGTCTTTCAGATTC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTAAAGAAATCAGGCTCTaGCTCAGACTTGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFKEIRL*LRLGGI
Trigger: GATGCCACCAAGTCTGAGTCAGAGCCTGATTTCTTT...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGTCATCCTGGCTCTCCTaGCCCTCTCCAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLSSWLS*PSPDSR
Trigger: CCTGCTGTCTGGAGAGGGTCAGGAGAGCCAGGATGA...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGATCATCCTGGCTCTCCTaGCCCTCTCCAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRSSWLS*PSPDSR
Trigger: CCTGCTGTCTGGAGAGGGTCAGGAGAGCCAGGATGA...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAACCCCTGTGGCGATaGTCACTGCCTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILEPLWR*SLPAGL
Trigger: CAGCCCAGCAGGCAGTGATCATCGCCACAGGGGTTC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGCGGGCCAAACGCCCTaGAGCCGACTTGCCATTACA +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRAGQTP*SRLAIT
Trigger: TGTAATGGCAAGTCGGCTTCAGGGCGTTTGGCCCGC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGTGGGTGATGATCCGGTaGCACAGGAGACGAAACCTT +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSWVMIR*HRRRNL
Trigger: AAGGTTTCGTCTCCTGTGTCACCGGATCATCACCCA...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCACAAGTTTGAATACTaGCTCCAAGACAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHHKFEY*LQDKDD
Trigger: GTCATCTTTGTCTTGGAGTCAGTATTCAAACTTGTG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGTAGATGGGTGAGATaGCGGTGTTGTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSSRWVR*RCCSRW
Trigger: CCACCTGCTACAACACCGTCATCTCACCCATCTACT...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAAGACAAGATGGAGCCTaGCTGGGCTTTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRRQDGA*LGFGEP
Trigger: GGGCTCCCCAAAGCCCAGTCAGGCTCCATCTTGTCT...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAAGACAAGATGGAGCCTaGCTGGGCTTTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRRQDGA*LGFGEP
Trigger: GGGCTCCCCAAAGCCCAGTCAGGCTCCATCTTGTCT...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCTTGCTGCCTGGCGCCTaGGAGGCCTCTGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSLLPGA*EASEPE
Trigger: CTCTGGCTCAGAGGCCTCTCAGGCGCCAGGCAGCAA...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGGGCCCACTCACCTCTaGCAACAGGTCTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILGPTHL*QQVFPA
Trigger: AGCCGGGAAGACCTGTTGTCAGAGGTGAGTGGGCCC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGGGCAGGAGGTCTCCTaGAATCCAGCTCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRGQEVS*NPAQLR
Trigger: ACGGAGCTGAGCTGGATTTCAGGAGACCTCCTGCCC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACGCTGTCCAGGCAGCTaGCAGCGATGGAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIRCPGS*QRWSVS
Trigger: GGAGACACTCCATCGCTGTCAGCTGCCTGGACAGCG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCGCTGTCCAGGCAGCTaGCAGCGATGGAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYRCPGS*QRWSVS
Trigger: GGAGACACTCCATCGCTGTCAGCTGCCTGGACAGCG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGACAGGTCGTTGAGCTaGGTGAAGCTCCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRDRSLS*VKLRGC
Trigger: ACAGCCCCGGAGCTTCACGCAGCTCAACGACCTGTC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTGGGCACGCTCCTaGAGGATCGCATGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLVWARS*RIACRS
Trigger: AGAACGGCATGCGATCCTGCAGGAGCGTGCCCACAC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGTGTGGGCACGCTCCTaGAGGATCGCATGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRVWARS*RIACRS
Trigger: AGAACGGCATGCGATCCTGCAGGAGCGTGCCCACAC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGTGGCTCAGAGAAGCTTaGCAGGGTGCTAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSWLREA*QGASIG
Trigger: TCCAATGCTAGCACCCTGGCAAGCTTCTCTGAGCCA...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGGCCAGCCTGCGGGCTaGTTTGCGGAGGATGTACAC +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILGQPAG*FAEDVH
Trigger: GTGTACATCCTCCGCAAAGCAGCCCGCAGGCTGGCC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTAGACCTGGGCCAGCCTaGGGGCTGCTTTGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIRPGPA*GLLCGG
Trigger: TCCTCCGCAAAGCAGCCCGCAGGCTGGCCCAGGTCT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGTGAACGAGAGCAGCTaGCACTGGGCTGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILVNESS*HWAGAP
Trigger: AGGAGCCCCAGCCCAGTGGCAGCTGCTCTCGTTCAC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCACAGTCCTGCCAGATaGCTCCGATGGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYHSPAR*LRWGPG
Trigger: CCCAGGTCCCCATCGGAGGCATCTGGCAGGACTGTG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGGACTCTGGCTCCCCTaGTCCTGTCCGGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILGLWLP*SCPGTV
Trigger: TACTGTGCCCGGACAGGAGCAGGGGAGCCAGAGTCC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGACACAGAACTAGGCTCTaGATCTGGGCCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRHRTRL*IWAQAR
Trigger: CCGAGCCTGGGCCCAGATGCAGAGCCTAGTTCTGTG...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTACCACGAGCTGCCGCTaGAGTGCCGGCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSITTSCR*SAGRKR
Trigger: TCGCTTCCTGCCGGCACTGCAGCGGCAGCTCGTGGT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCTTCCCCCACACCTGTaGTGGAGCTCTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLLPPHL*WSSWAV
Trigger: CACTGCCCAAGAGCTCCAGCACAGGTGTGGGGGAAG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCGCCTGCTGGTCCAGCTaGTTGCTGCGCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFACWSS*LLRSRD
Trigger: GTCCCTGGAGCGCAGCAAGCAGCTGGACCAGCAGGC...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGCCTGCTGGTCCAGCTaGTTGCTGCGCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIACWSS*LLRSRD
Trigger: GTCCCTGGAGCGCAGCAAGCAGCTGGACCAGCAGGC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCGCGATGATCACTGCCTaGTGGGCTGGCCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSAMITA*WAGPVL
Trigger: GAGGACCGGGCCAGCCCAGCAGGCAGTGATCATCGC...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGCGATGATCACTGCCTaGTGGGCTGGCCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIAMITA*WAGPVL
Trigger: GAGGACCGGGCCAGCCCAGCAGGCAGTGATCATCGC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATTGTGGCGATGATCACTaGCTGCTGGGCTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYCGDDH*LLGWPG
Trigger: ACCGGGCCAGCCCAGCAGGCAGTGATCATCGCCACA...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGCAGCACCCTCAGCATaGCGAGAATCTTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRAAPSA*RESWCR
Trigger: GCGGCACCAAGATTCTCGGCATGCTGAGGGTGCTGC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGCAGCACCCTCAGCATaGCGAGAATCTTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRAAPSA*RESWCR
Trigger: GCGGCACCAAGATTCTCGGCATGCTGAGGGTGCTGC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACACCGTGTCCAGCAGTaGCCGCATGCCCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILHRVQQ*PHAHSH
Trigger: ATGGCTGTGGGCATGCGGGCACTGCTGGACACGGTG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACACCGTGTCCAGCAGTaGCCGCATGCCCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIHRVQQ*PHAHSH
Trigger: ATGGCTGTGGGCATGCGGGCACTGCTGGACACGGTG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCTTCCCCGCGCAGTGTaGGCACGCTCCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSILPRAV*ARSCRI
Trigger: GATCCTGCAGGAGCGTGCCCACACTGCGCGGGGAAG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCTTCCCCGCGCAGTGTaGGCACGCTCCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFLPRAV*ARSCRI
Trigger: GATCCTGCAGGAGCGTGCCCACACTGCGCGGGGAAG...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGTGGTGGTGGACCAGGTaGTGGACAGACAGACGACGG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLWWWTR*WTDRRR
Trigger: CCGTCGTCTGTCTGTCCACCACCTGGTCCACCACCA...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCCTGTCCTGGATCTCTaGGCTGGCCCGGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYPVLDL*AGPGNS
Trigger: AGAGTTCCCCGGGCCAGCCCAGAGATCCAGGACAGG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATTGGCATCCCTGTCCTaGATCTCTGGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSILASLS*ISGLAR
Trigger: CCGGGCCAGCCCAGAGATCCAGGACAGGGATGCCAA...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTATTGGCATCCCTGTCCTaGATCTCTGGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILLASLS*ISGLAR
Trigger: CCGGGCCAGCCCAGAGATCCAGGACAGGGATGCCAA...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATTTGGCATCCCTGTCCTaGATCTCTGGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYLASLS*ISGLAR
Trigger: CCGGGCCAGCCCAGAGATCCAGGACAGGGATGCCAA...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGCCAGCGGGACCCATTaGCATCCCTGTCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRASGTH*HPCPGS
Trigger: AGATCCAGGACAGGGATGCCAATGGGTCCCGCTGGC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAAGTGGGGGTAGAGGGTaGTGGCAGCATGAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILSGGRG*WQHEPA
Trigger: CGCTGGCTCATGCTGCCACCACCCTCTACCCCCACT...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACGCCTGGCAACGGACTaGCTCCAAGTGGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIRLATD*LQVAVS
Trigger: GCTGACTGCCACTTGGAGCCAGTCCGTTGCCAGGCG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGGCTGGTATGCACAGTaGGGTATACCTTCCCACTAC +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSGWYAQ*GIPSHY
Trigger: GTAGTGGGAAGGTATACCCCACTGTGCATACCAGCC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTACTAGGCTCTGCATCTaGGCCCAGGCTCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSITRLCI*AQARPS
Trigger: CGACGGCCGAGCCTGGGCCCAGATGCAGAGCCTAGT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCACTAGGCTCTGCATCTaGGCCCAGGCTCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFTRLCI*AQARPS
Trigger: CGACGGCCGAGCCTGGGCCCAGATGCAGAGCCTAGT...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCTCCGCTCCCCGCTTaGGCTCCTACGCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFPPLPA*APTLQA
Trigger: AGCCTGAAGCGTAGGAGCCCAAGCGGGGAGCGGAGG...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGATGATCACTGCCTGCTaGGCTGGCCCGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLMITAC*AGPVLF
Trigger: GAAGAGGACCGGGCCAGCCCAGCAGGCAGTGATCAT...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAATCATCCCCATCCAGTaGGGGGTCATCAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRIIPIQ*GVISPQ
Trigger: CTGCGGGCTGATGACCCCCCACTGGATGGGGATGAT...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAATCATCCCCATCCAGTaGGGGGTCATCAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRIIPIQ*GVISPQ
Trigger: CTGCGGGCTGATGACCCCCCACTGGATGGGGATGAT...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGGACCCACCGGTAACTaGCCTCAGCACAGTCGGACT +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLGPTGN*PQHSRT
Trigger: AGTCCGACTGTGCTGAGGCCAGTTACCGGTGGGTCC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGGACCCACCGGTAACTaGCCTCAGCACAGTCGGACT +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRGPTGN*PQHSRT
Trigger: AGTCCGACTGTGCTGAGGCCAGTTACCGGTGGGTCC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACTGGTACACAGGTGGTaGACGAGGAGCCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSILVHRW*TRSRKR
Trigger: GCGCTTCCGGCTCCTCGTCCACCACCTGTGTACCAG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATGGCTGGTACACAGGTaGTGGACGAGGAGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRWLVHR*WTRSRK
Trigger: CTTCCGGCTCCTCGTCCACCACCTGTGTACCAGCCA...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGAGGCTGCTCCAATGTaGGCCGTGGTGTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIEAAPM*AVVCGA
Trigger: GGCTCCACACACCACGGCCCACATTGGAGCAGCCTC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAAAGATGGAGCCTGACTaGGCTTTGGGGAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRKMEPD*ALGSPQ
Trigger: CTGGGGGCTCCCCAAAGCCCAGTCAGGCTCCATCTT...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGCAGCTGGTGTCTGCTaGTTGGGAGTGAACAGACAA +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSAAGVC*LGVNRQ
Trigger: TTGTCTGTTCACTCCCAACCAGCAGACACCAGCTGC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGCCTGGGCAAGGGGCTaGCAGGCGGATGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIAWARG*QADVLG
Trigger: TCCAAGCACATCCGCCTGCCAGCCCCTTGCCCAGGC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCAAAGAAGGCAAAGATaGAGTCGTCGAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSQRRQR*SRRRPA
Trigger: TGCAGGCCTTCGACGACTTCATCTTTGCCTTCTTTG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCACTCAGCGGGAGGCTaGAATTCTCAGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLHSAGG*NSQGGS
Trigger: GCTTCCTCCCTGAGAATTTCAGCCTCCCGCTGAGTG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCGTTCTCCCGAGGCTaGGAGCAGATGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFPFSRG*EQMKGL
Trigger: GAGCCCCTTCATCTGCTCTCAGCCTCGGGAGAACGG...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAAGACAGACGACGGTGTaGACGAGAGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRRQTTV*TRAAAT
Trigger: AGTGGCAGCTGCTCTCGTTCACACCGTCGTCTGTCT...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGCTTGTGCATGGAGCTaGAGGGCCCAGGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYACAWS*RAQVGC
Trigger: ACATCCCACCTGGGCCCTTCAGCTCCATGCACAAGC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGCTTGTGCATGGAGCTaGAGGGCCCAGGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIACAWS*RAQVGC
Trigger: ACATCCCACCTGGGCCCTTCAGCTCCATGCACAAGC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGCTTGTGCATGGAGCTaGAGGGCCCAGGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILACAWS*RAQVGC
Trigger: ACATCCCACCTGGGCCCTTCAGCTCCATGCACAAGC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACGGAGGTCGCTGTGCTaGGCGTCCTGTGTGAACTCA +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILRRSLC*ASCVNS
Trigger: TGAGTTCACACAGGACGCTCAGCACAGCGACCTCCG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCGGAGGTCGCTGTGCTaGGCGTCCTGTGTGAACTCA +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYRRSLC*ASCVNS
Trigger: TGAGTTCACACAGGACGCTCAGCACAGCGACCTCCG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCTTTCCAGGGCGTTGGTaGGCTCCTCGGGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFFPGRW*APRAAR
Trigger: ACGAGCAGCCCGAGGAGCTCACCAACGCCCTGGAAA...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGGCCCGGTCCTCTTCTaGACTCTCCTCCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIGPVLF*TLLLIL
Trigger: CAGGATGAGGAGGAGAGTTCAGAAGAGGACCGGGCC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGCGGGCCAAACGCCCTaGAGCCGACTTGCCATTACA +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIAGQTP*SRLAIT
Trigger: TGTAATGGCAAGTCGGCTTCAGGGCGTTTGGCCCGC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCAGGAGACGAAACCTTaGCTGGGGAGGGAAGATATA +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSQETKP*LGREDI
Trigger: TATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTCACAAGTTTGAATACTaGCTCCAAGACAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVHKFEY*LQDKDD
Trigger: GTCATCTTTGTCTTGGAGTCAGTATTCAAACTTGTG...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACCACAAGTTTGAATACTaGCTCCAAGACAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHHKFEY*LQDKDD
Trigger: GTCATCTTTGTCTTGGAGTCAGTATTCAAACTTGTG...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAAGTGGGGCTGCGGGCTaGGTGTCTTCATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRSGAAG*VSSSLA
Trigger: AGCTAGAGATGAAGACACTCAGCCCGCAGCCCCACT...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAAGACAAGATGGAGCCTaGCTGGGCTTTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIRQDGA*LGFGEP
Trigger: GGGCTCCCCAAAGCCCAGTCAGGCTCCATCTTGTCT...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGGGCCCACTCACCTCTaGCAACAGGTCTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIGPTHL*QQVFPA
Trigger: AGCCGGGAAGACCTGTTGTCAGAGGTGAGTGGGCCC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGGGCAGGAGGTCTCCTaGAATCCAGCTCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILGQEVS*NPAQLR
Trigger: ACGGAGCTGAGCTGGATTTCAGGAGACCTCCTGCCC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGACAGGGGTTCTTCCTaGCTGCTGGGCAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYDRGSS*LLGRRS
Trigger: AGACCTCCTGCCCAGCAGTCAGGAAGAACCCCTGTC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGACAGGGGTTCTTCCTaGCTGCTGGGCAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIDRGSS*LLGRRS
Trigger: AGACCTCCTGCCCAGCAGTCAGGAAGAACCCCTGTC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCGCTGTCCAGGCAGCTaGCAGCGATGGAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSRCPGS*QRWSVS
Trigger: GGAGACACTCCATCGCTGTCAGCTGCCTGGACAGCG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCGCTGTCCAGGCAGCTaGCAGCGATGGAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIRCPGS*QRWSVS
Trigger: GGAGACACTCCATCGCTGTCAGCTGCCTGGACAGCG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCGCTGTCCAGGCAGCTaGCAGCGATGGAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFRCPGS*QRWSVS
Trigger: GGAGACACTCCATCGCTGTCAGCTGCCTGGACAGCG...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGATTTCTTTGGGGAGGGTaGGGCAGCCGTGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRFLWGG*GSRAVK
Trigger: CTTGACAGCACGGCTGCCTCACCCTCCCCAAAGAAA...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGTTTCTTTGGGGAGGGTaGGGCAGCCGTGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLFLWGG*GSRAVK
Trigger: CTTGACAGCACGGCTGCCTCACCCTCCCCAAAGAAA...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTTCTTTGGGGAGGGTaGGGCAGCCGTGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRFLWGG*GSRAVK
Trigger: CTTGACAGCACGGCTGCCTCACCCTCCCCAAAGAAA...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACAGGTCGTTGAGCTaGGTGAAGCTCCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILDRSLS*VKLRGC
Trigger: ACAGCCCCGGAGCTTCACGCAGCTCAACGACCTGTC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTACGGGTTACAGACCGTaGGGAGACACCAGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSITGYRP*GDTSSA
Trigger: CGCGGAGCTGGTGTCTCCGCACGGTCTGTAACCCGT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGCCTGCGGGCTGCTTTaGGGAGGATGTACACCAGGT +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILACGLL*GGCTPG
Trigger: ACCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGGCCAGCCTGCGGGCTaGTTTGCGGAGGATGTACAC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIGQPAG*FAEDVH
Trigger: GTGTACATCCTCCGCAAAGCAGCCCGCAGGCTGGCC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCGGCCAGCCTGCGGGCTaGTTTGCGGAGGATGTACAC +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSGQPAG*FAEDVH
Trigger: GTGTACATCCTCCGCAAAGCAGCCCGCAGGCTGGCC...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACACTACCCACAGTCCTaGCAGATGCCTCCGATGGGG +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILHYPQS*QMPPMG
Trigger: CCCCATCGGAGGCATCTGGCAGGACTGTGGGTAGTG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACACTACCCACAGTCCTaGCAGATGCCTCCGATGGGG +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIHYPQS*QMPPMG
Trigger: CCCCATCGGAGGCATCTGGCAGGACTGTGGGTAGTG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAACAGGCTCCACTGTCTaGCTTGGAGCAAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRTGSTV*LGARAG
Trigger: TCCAGCCCTTGCTCCAAGGCAGACAGTGGAGCCTGT...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGACAGGCTCCACTGTCTaGCTTGGAGCAAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLTGSTV*LGARAG
Trigger: TCCAGCCCTTGCTCCAAGGCAGACAGTGGAGCCTGT...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCGGACTCTGGCTCCCCTaGTCCTGTCCGGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFGLWLP*SCPGTV
Trigger: TACTGTGCCCGGACAGGAGCAGGGGAGCCAGAGTCC...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCGACAGGCCACCTCCCTaGTGGCCCACAATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSDRPPP*WPTISH
Trigger: GTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCTGTC...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCTTCCCCCACACCTGTaGTGGAGCTCTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYLPPHL*WSSWAV
Trigger: CACTGCCCAAGAGCTCCAGCACAGGTGTGGGGGAAG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACTTCCCCCACACCTGTaGTGGAGCTCTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILLPPHL*WSSWAV
Trigger: CACTGCCCAAGAGCTCCAGCACAGGTGTGGGGGAAG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCTGTGGCGATGATCACTaGCTGCTGGGCTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSCGDDH*LLGWPG
Trigger: ACCGGGCCAGCCCAGCAGGCAGTGATCATCGCCACA...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTTGTGGCGATGATCACTaGCTGCTGGGCTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSICGDDH*LLGWPG
Trigger: ACCGGGCCAGCCCAGCAGGCAGTGATCATCGCCACA...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCACCGTGTCCAGCAGTaGCCGCATGCCCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFHRVQQ*PHAHSH
Trigger: ATGGCTGTGGGCATGCGGGCACTGCTGGACACGGTG...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGCTGGCAGGCGGATGTaGTTGGAGACTTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLAGRRM*LETLLW
Trigger: CCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGCTGGCAGGCGGATGTaGTTGGAGACTTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRAGRRM*LETLLW
Trigger: CCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGAGGATCCGGCAGCGTTaGGAGTCACAGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLRIRQR*ESQAMS
Trigger: GGACATTGCCTGTGACTCCCAACGCTGCCGGATCCT...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTATGGTGGTGGACCAGGTaGTGGACAGACAGACGACGG +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILWWWTR*WTDRRR
Trigger: CCGTCGTCTGTCTGTCCACCACCTGGTCCACCACCA...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCCTGTCCTGGATCTCTaGGCTGGCCCGGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSPVLDL*AGPGNS
Trigger: AGAGTTCCCCGGGCCAGCCCAGAGATCCAGGACAGG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGCCAGCGGGACCCATTaGCATCCCTGTCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILASGTH*HPCPGS
Trigger: AGATCCAGGACAGGGATGCCAATGGGTCCCGCTGGC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCGCCTGGCAACGGACTaGCTCCAAGTGGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSRLATD*LQVAVS
Trigger: GCTGACTGCCACTTGGAGCCAGTCCGTTGCCAGGCG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCAGGCCACCTCCCTGCTaGCCCACAATCTCCCACACG +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSRPPPC*PTISHT
Trigger: CGTGTGGGAGATTGTGGGCCAGCAGGGAGGTGGCCT...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAATGATCACTGCCTGCTaGGCTGGCCCGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILMITAC*AGPVLF
Trigger: GAAGAGGACCGGGCCAGCCCAGCAGGCAGTGATCAT...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATATGATCACTGCCTGCTaGGCTGGCCCGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYMITAC*AGPVLF
Trigger: GAAGAGGACCGGGCCAGCCCAGCAGGCAGTGATCAT...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAATCATCCCCATCCAGTaGGGGGTCATCAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILIIPIQ*GVISPQ
Trigger: CTGCGGGCTGATGACCCCCCACTGGATGGGGATGAT...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATATCATCCCCATCCAGTaGGGGGTCATCAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYIIPIQ*GVISPQ
Trigger: CTGCGGGCTGATGACCCCCCACTGGATGGGGATGAT...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCTGGTACACAGGTGGTaGACGAGGAGCCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSILVHRW*TRSRKR
Trigger: GCGCTTCCGGCTCCTCGTCCACCACCTGTGTACCAG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACGGTGTTGTAGCAGGTaGACTCCTGGTCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRRCCSR*TPGHSP
Trigger: GGGACTGTGACCAGGAGTCCACCTGCTACAACACCG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCGGTGTTGTAGCAGGTaGACTCCTGGTCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLRCCSR*TPGHSP
Trigger: GGGACTGTGACCAGGAGTCCACCTGCTACAACACCG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCGAGGCTGCTCCAATGTaGGCCGTGGTGTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFEAAPM*AVVCGA
Trigger: GGCTCCACACACCACGGCCCACATTGGAGCAGCCTC...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGTGAACAGACAAGATaGAGCCTGACTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSSEQTR*SLTGLW
Trigger: CCAAAGCCCAGTCAGGCTCCATCTTGTCTGTTCACT...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATGTCCTCACACGGCCTaGACATACCCAGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRCPHTA*TYPESH
Trigger: GTGTGACTCTGGGTATGTTCAGGCCGTGTGAGGACA...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGATGTCCTCACACGGCCTaGACATACCCAGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRCPHTA*TYPESH
Trigger: GTGTGACTCTGGGTATGTTCAGGCCGTGTGAGGACA...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATAGCCCTGCCCACAGCTaGACACCAACGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYSPAHS*TPTMPK
Trigger: CTTTGGCATCGTTGGTGTTCAGCTGTGGGCAGGGCT...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACACTCAGCGGGAGGCTaGAATTCTCAGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILHSAGG*NSQGGS
Trigger: GCTTCCTCCCTGAGAATTTCAGCCTCCCGCTGAGTG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAAGACAGACGACGGTGTaGACGAGAGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILRQTTV*TRAAAT
Trigger: AGTGGCAGCTGCTCTCGTTCACACCGTCGTCTGTCT...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGCTTGTGCATGGAGCTaGAGGGCCCAGGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIACAWS*RAQVGC
Trigger: ACATCCCACCTGGGCCCTTCAGCTCCATGCACAAGC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAAAGAAATCAGGCTCTaGCTCAGACTTGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSKEIRL*LRLGGI
Trigger: GATGCCACCAAGTCTGAGTCAGAGCCTGATTTCTTT...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCTCATCCTGGCTCTCCTaGCCCTCTCCAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSSSWLS*PSPDSR
Trigger: CCTGCTGTCTGGAGAGGGTCAGGAGAGCCAGGATGA...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCGGCCCGGTCCTCTTCTaGACTCTCCTCCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFGPVLF*TLLLIL
Trigger: CAGGATGAGGAGGAGAGTTCAGAAGAGGACCGGGCC...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGAAGGGTTGTGGTTCATaGTGGGCTGCTGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLKGCGS*WAAGPL
Trigger: GAGTGGACCAGCAGCCCATCATGAACCACAACCCTT...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAAAGGGTTGTGGTTCATaGTGGGCTGCTGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRKGCGS*WAAGPL
Trigger: GAGTGGACCAGCAGCCCATCATGAACCACAACCCTT...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCACAAGTTTGAATACTaGCTCCAAGACAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDHKFEY*LQDKDD
Trigger: GTCATCTTTGTCTTGGAGTCAGTATTCAAACTTGTG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATAGTGGGGCTGCGGGCTaGGTGTCTTCATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYSGAAG*VSSSLA
Trigger: AGCTAGAGATGAAGACACTCAGCCCGCAGCCCCACT...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACTCAAGGGAGAAGCCTaGAGAGGCTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRLKGEA*RGCSNV
Trigger: CACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCGGGCAGGAGGTCTCCTaGAATCCAGCTCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFGQEVS*NPAQLR
Trigger: ACGGAGCTGAGCTGGATTTCAGGAGACCTCCTGCCC...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGAGTTGACAGGCAGCTaGATACAGCTTAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSELTGS*IQLNCP
Trigger: TGGACAGTTAAGCTGTATTCAGCTGCCTGTCAACTC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGTGTGGGCACGCTCCTaGAGGATCGCATGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIVWARS*RIACRS
Trigger: AGAACGGCATGCGATCCTGCAGGAGCGTGCCCACAC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCCTTTGAAGGGGTTGTaGTCGCCTGCAGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLPLKGL*SPAEQL
Trigger: CAACTGCTCTGCAGGCGAGCACAACCCCTTCAAAGG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCGCCTGCGGGCTGCTTTaGGGAGGATGTACACCAGGT +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFACGLL*GGCTPG
Trigger: ACCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGC...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCACTACCCACAGTCCTaGCAGATGCCTCCGATGGGG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIHYPQS*QMPPMG
Trigger: CCCCATCGGAGGCATCTGGCAGGACTGTGGGTAGTG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAACAGGCTCCACTGTCTaGCTTGGAGCAAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILTGSTV*LGARAG
Trigger: TCCAGCCCTTGCTCCAAGGCAGACAGTGGAGCCTGT...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCACAGAACTAGGCTCTaGATCTGGGCCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFHRTRL*IWAQAR
Trigger: CCGAGCCTGGGCCCAGATGCAGAGCCTAGTTCTGTG...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCACAGAACTAGGCTCTaGATCTGGGCCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIHRTRL*IWAQAR
Trigger: CCGAGCCTGGGCCCAGATGCAGAGCCTAGTTCTGTG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCTTCCCCCACACCTGTaGTGGAGCTCTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFLPPHL*WSSWAV
Trigger: CACTGCCCAAGAGCTCCAGCACAGGTGTGGGGGAAG...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGATGCCGAGAATCTTGGTaGCGCTGTCAGAGACCATGG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRCRESW*RCQRPW
Trigger: CCATGGTCTCTGACAGCGGCACCAAGATTCTCGGCA...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATGGTTCATGATGGGCTaGTGGTCCACTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRWFMMG*WSTPTA
Trigger: TGCTGTGGGAGTGGACCAGCAGCCCATCATGAACCA...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGATGGTTCATGATGGGCTaGTGGTCCACTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRWFMMG*WSTPTA
Trigger: TGCTGTGGGAGTGGACCAGCAGCCCATCATGAACCA...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGGTACCATCGTGGGGTaGTCAAGGGAGAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRGTIVG*SREKPE
Trigger: TTCAGGCTTCTCCCTTGAGCACCCCACGATGGTACC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGGTACCATCGTGGGGTaGTCAAGGGAGAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLGTIVG*SREKPE
Trigger: TTCAGGCTTCTCCCTTGAGCACCCCACGATGGTACC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACGGCAGTGCTCCCATTaGGGCACATGTAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRRQCSH*GTCSCH
Trigger: ATGACAGCTACATGTGCCGCAATGGGAGCACTGCCG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTTGGTGGTGGACCAGGTaGTGGACAGACAGACGACGG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIWWWTR*WTDRRR
Trigger: CCGTCGTCTGTCTGTCCACCACCTGGTCCACCACCA...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCTGACTCAGACTTGGTaGCATCTCCCTCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLLTQTW*HLPLPG
Trigger: TCCAGGCAGAGGGAGATGCCACCAAGTCTGAGTCAG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCATGATCACTGCCTGCTaGGCTGGCCCGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFMITAC*AGPVLF
Trigger: GAAGAGGACCGGGCCAGCCCAGCAGGCAGTGATCAT...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGCATGCCGAGAATCTTaGTGCCGCTGTCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRACRES*CRCQRP
Trigger: TGGTCTCTGACAGCGGCACCAAGATTCTCGGCATGC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGCATGCCGAGAATCTTaGTGCCGCTGTCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRACRES*CRCQRP
Trigger: TGGTCTCTGACAGCGGCACCAAGATTCTCGGCATGC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGCATGCCGAGAATCTTaGTGCCGCTGTCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLACRES*CRCQRP
Trigger: TGGTCTCTGACAGCGGCACCAAGATTCTCGGCATGC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGTTCATGATGGGCTGCTaGTCCACTCCCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLFMMGC*STPTAS
Trigger: GGATGCTGTGGGAGTGGACCAGCAGCCCATCATGAA...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTTGGCTGGTACACAGGTaGTGGACGAGGAGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIWLVHR*WTRSRK
Trigger: CTTCCGGCTCCTCGTCCACCACCTGTGTACCAGCCA...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCTGGCTGGTACACAGGTaGTGGACGAGGAGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFWLVHR*WTRSRK
Trigger: CTTCCGGCTCCTCGTCCACCACCTGTGTACCAGCCA...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTAAGATGGAGCCTGACTaGGCTTTGGGGAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIKMEPD*ALGSPQ
Trigger: CTGGGGGCTCCCCAAAGCCCAGTCAGGCTCCATCTT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCAAGATGGAGCCTGACTaGGCTTTGGGGAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFKMEPD*ALGSPQ
Trigger: CTGGGGGCTCCCCAAAGCCCAGTCAGGCTCCATCTT...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGCTGTAGGATGCAGCTaGTGTCTGCTGGTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRAVGCS*CLLVGS
Trigger: ACTCCCAACCAGCAGACACCAGCTGCATCCTACAGC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTAGCCCTGCCCACAGCTaGACACCAACGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSISPAHS*TPTMPK
Trigger: CTTTGGCATCGTTGGTGTTCAGCTGTGGGCAGGGCT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCACTCAGCGGGAGGCTaGAATTCTCAGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSHSAGG*NSQGGS
Trigger: GCTTCCTCCCTGAGAATTTCAGCCTCCCGCTGAGTG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTAGACAGACGACGGTGTaGACGAGAGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIRQTTV*TRAAAT
Trigger: AGTGGCAGCTGCTCTCGTTCACACCGTCGTCTGTCT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCAGACAGACGACGGTGTaGACGAGAGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFRQTTV*TRAAAT
Trigger: AGTGGCAGCTGCTCTCGTTCACACCGTCGTCTGTCT...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCACAGCCTCACTGTCTaGGTCAGGCATTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLHSLTV*VRHFMV
Trigger: GACCATGAAATGCCTGACTCAGACAGTGAGGCTGTG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGAATCTGAAAGACAGTaGCAATGGCCCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRESERQ*QWPRAG
Trigger: CCCTGCTCTGGGCCATTGTCACTGTCTTTCAGATTC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGATGGGTGATGATCCGGTaGCACAGGAGACGAAACCTT +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRWVMIR*HRRRNL
Trigger: AAGGTTTCGTCTCCTGTGTCACCGGATCATCACCCA...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACTGGTGTCCTCACCCTaGCACACGAAGAACTTCCCT +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSILVSSP*HTKNFP
Trigger: AGGGAAGTTCTTCGTGTGTCAGGGTGAGGACACCAG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCACAAGTTTGAATACTaGCTCCAAGACAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: RPPACALQEEGIELDWLFHKFEY*LQDKDD
Trigger: GTCATCTTTGTCTTGGAGTCAGTATTCAAACTTGTG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGTGGGCAGTGAAGCATTaGCCTCAATCTCTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLWAVKH*PQSLPA
Trigger: CGCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCA...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGGGGTTGATGGGCAGTaGAGCATTGACCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLGVDGQ*SIDLNL
Trigger: GAGATTGAGGTCAATGCTTCACTGCCCATCAACCCC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGGGGTTGATGGGCAGTaGAGCATTGACCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRGVDGQ*SIDLNL
Trigger: GAGATTGAGGTCAATGCTTCACTGCCCATCAACCCC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGAGTAGATGGGTGAGATaGCGGTGTTGTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLSRWVR*RCCSRW
Trigger: CCACCTGCTACAACACCGTCATCTCACCCATCTACT...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAAGTAGATGGGTGAGATaGCGGTGTTGTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRSRWVR*RCCSRW
Trigger: CCACCTGCTACAACACCGTCATCTCACCCATCTACT...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTAGTGGGGCTGCGGGCTaGGTGTCTTCATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSISGAAG*VSSSLA
Trigger: AGCTAGAGATGAAGACACTCAGCCCGCAGCCCCACT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACTCAAGGGAGAAGCCTaGAGAGGCTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILLKGEA*RGCSNV
Trigger: CACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACTCAAGGGAGAAGCCTaGAGAGGCTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSILKGEA*RGCSNV
Trigger: CACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCTTTCTTTGGGGAGGGTaGGGCAGCCGTGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFFLWGG*GSRAVK
Trigger: CTTGACAGCACGGCTGCCTCACCCTCCCCAAAGAAA...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCTTTCTTTGGGGAGGGTaGGGCAGCCGTGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSFLWGG*GSRAVK
Trigger: CTTGACAGCACGGCTGCCTCACCCTCCCCAAAGAAA...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGAGAAGCTGACATTCTaGAGGTCCAGCGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRREKLTF*RSSEYS
Trigger: GGAGTACTCGCTGGACCTGCAGAATGTCAGCTTCTC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGAGAAGCTGACATTCTaGAGGTCCAGCGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTREKLTF*RSSEYS
Trigger: GGAGTACTCGCTGGACCTGCAGAATGTCAGCTTCTC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGGGGTTGTGCTCGCCTaGAGAGCAGTTGGTATAGTA +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRGVVLA*RAVGIV
Trigger: TACTATACCAACTGCTCTGCAGGCGAGCACAACCCC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACCTTTGAAGGGGTTGTaGTCGCCTGCAGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILPLKGL*SPAEQL
Trigger: CAACTGCTCTGCAGGCGAGCACAACCCCTTCAAAGG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACCTTTGAAGGGGTTGTaGTCGCCTGCAGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIPLKGL*SPAEQL
Trigger: CAACTGCTCTGCAGGCGAGCACAACCCCTTCAAAGG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGTGGCTCAGAGAAGCTTaGCAGGGTGCTAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLWLREA*QGASIG
Trigger: TCCAATGCTAGCACCCTGGCAAGCTTCTCTGAGCCA...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGATGGCTCAGAGAAGCTTaGCAGGGTGCTAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRWLREA*QGASIG
Trigger: TCCAATGCTAGCACCCTGGCAAGCTTCTCTGAGCCA...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGGTGGAGGGCTGGTATaGACAGTGGGGTATACCTTC +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILGGGLV*TVGYTF
Trigger: GAAGGTATACCCCACTGTGCATACCAGCCCTCCACC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAAAGGGCTGGAGATTTTaGAGGAGCTATGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRKGWRF*RSYGRL
Trigger: GAGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTT...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTACAGGCTCCACTGTCTaGCTTGGAGCAAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSITGSTV*LGARAG
Trigger: TCCAGCCCTTGCTCCAAGGCAGACAGTGGAGCCTGT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCACAGGCTCCACTGTCTaGCTTGGAGCAAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFTGSTV*LGARAG
Trigger: TCCAGCCCTTGCTCCAAGGCAGACAGTGGAGCCTGT...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCCCCTTTGCTCAGGTTaGCCTCATCATCGCCATCAT +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLPLCSG*PHHRHH
Trigger: ATGATGGCGATGATGAGGGCAACCTGAGCAAAGGGG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAAAAGCACCAGCCCAGTaGCACCACCTTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRKAPAQ*HHLHCH
Trigger: ATGACAGTGAAGGTGGTGGCACTGGGCTGGTGCTTT...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGAAAGCACCAGCCCAGTaGCACCACCTTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLKAPAQ*HHLHCH
Trigger: ATGACAGTGAAGGTGGTGGCACTGGGCTGGTGCTTT...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGCCGAGAATCTTGGTaGCGCTGTCAGAGACCATGG +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSICRESW*RCQRPW
Trigger: CCATGGTCTCTGACAGCGGCACCAAGATTCTCGGCA...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATTGGTTCATGATGGGCTaGTGGTCCACTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYWFMMG*WSTPTA
Trigger: TGCTGTGGGAGTGGACCAGCAGCCCATCATGAACCA...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCAGCGCTGGCTGAGCTaGCGGAAGCAATTACATCGT +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYQRWLS*RKQLHR
Trigger: ACGATGTAATTGCTTCCGGCAGCTCAGCCAGCGCTG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107789.8
ENSMUST00000107790.8
CDS-3UTR GCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACAGCGCTGGCTGAGCTaGCGGAAGCAATTACATCGT +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIQRWLS*RKQLHR
Trigger: ACGATGTAATTGCTTCCGGCAGCTCAGCCAGCGCTG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107789.8
ENSMUST00000107790.8
CDS-3UTR GCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCGGCAGTGCTCCCATTaGGGCACATGTAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYRQCSH*GTCSCH
Trigger: ATGACAGCTACATGTGCCGCAATGGGAGCACTGCCG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCGCTGGCAGGCGGATGTaGTTGGAGACTTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFAGRRM*LETLLW
Trigger: CCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGC...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGTTTGCCGATTTCCTCTaGCTGGAAACCCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLFADFL*LETLHE
Trigger: CTCGTGGAGGGTTTCCAGGCAGAGGAAATCGGCAAA...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGTCTGTCCGTGGGGTaGTCAAGGGAGAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSICLSVG*SREKPE
Trigger: TTCAGGCTTCTCCCTTGAGCACCCCACGGACAGACA...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGTCCAGTGTGATGACCTaGAAGATGGCGATCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLSSVMT*KMAIQA
Trigger: TGCCTGGATCGCCATCTTCCAGGTCATCACACTGGA...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGACTCTCCCGTTGCTTaGTCTCAGAGAACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLDSPVA*SQRTVW
Trigger: CCACACAGTTCTCTGAGACCAAGCAACGGGAGAGTC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGACTCTCCCGTTGCTTaGTCTCAGAGAACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRDSPVA*SQRTVW
Trigger: CCACACAGTTCTCTGAGACCAAGCAACGGGAGAGTC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGTCTCTGGTGGAGGGCTaGTATGCACAGTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLSLVEG*YAQWGI
Trigger: TATACCCCACTGTGCATACCAGCCCTCCACCAGAGA...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGATCCTTCAGCATCTCTaGTGGAGGGCTGGTATGCAC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLILQHL*WRAGMH
Trigger: GTGCATACCAGCCCTCCACCAGAGATGCTGAAGGAT...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAAAAATTCTTCCGGTCTaGCAACGTGTCCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRKILPV*QRVPIP
Trigger: CGGGATGGGGACACGTTGCCAGACCGGAAGAATTTT...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGAAAATTCTTCCGGTCTaGCAACGTGTCCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLKILPV*QRVPIP
Trigger: CGGGATGGGGACACGTTGCCAGACCGGAAGAATTTT...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGCATCTCCCTCTGCCTaGAAACCCTCCACGAGAATG +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILASPSA*KPSTRM
Trigger: CATTCTCGTGGAGGGTTTCCAGGCAGAGGGAGATGC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACTGACTCAGACTTGGTaGCATCTCCCTCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILLTQTW*HLPLPG
Trigger: TCCAGGCAGAGGGAGATGCCACCAAGTCTGAGTCAG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGCATGCCGAGAATCTTaGTGCCGCTGTCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIACRES*CRCQRP
Trigger: TGGTCTCTGACAGCGGCACCAAGATTCTCGGCATGC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGCATGCCGAGAATCTTaGTGCCGCTGTCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYACRES*CRCQRP
Trigger: TGGTCTCTGACAGCGGCACCAAGATTCTCGGCATGC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGAGGGACATCAGAGCCTaGCCCAGGTTGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLRDIRA*PRLSKL
Trigger: CAACTTTGACAACCTGGGCCAGGCTCTGATGTCCCT...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAAGGGACATCAGAGCCTaGCCCAGGTTGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRRDIRA*PRLSKL
Trigger: CAACTTTGACAACCTGGGCCAGGCTCTGATGTCCCT...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGAGCATCCAAGGGTTGTaGTTCATGATGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLSIQGL*FMMGCW
Trigger: CCAGCAGCCCATCATGAACCACAACCCTTGGATGCT...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAAGCATCCAAGGGTTGTaGTTCATGATGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRSIQGL*FMMGCW
Trigger: CCAGCAGCCCATCATGAACCACAACCCTTGGATGCT...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCGGTGTTGTAGCAGGTaGACTCCTGGTCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIRCCSR*TPGHSP
Trigger: GGGACTGTGACCAGGAGTCCACCTGCTACAACACCG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGCAGCTGGTGTCTGCTaGTTGGGAGTGAACAGACAA +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRAAGVC*LGVNRQ
Trigger: TTGTCTGTTCACTCCCAACCAGCAGACACCAGCTGC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGCAGCTGGTGTCTGCTaGTTGGGAGTGAACAGACAA +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRAAGVC*LGVNRQ
Trigger: TTGTCTGTTCACTCCCAACCAGCAGACACCAGCTGC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGCTGTAGGATGCAGCTaGTGTCTGCTGGTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYAVGCS*CLLVGS
Trigger: ACTCCCAACCAGCAGACACCAGCTGCATCCTACAGC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGCTCTAAGCTGCTTCTaGTCTCTTGAGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRALSCF*SLEGPW
Trigger: CCAAGGACCCTCAAGAGACCAGAAGCAGCTTAGAGC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGCTCTAAGCTGCTTCTaGTCTCTTGAGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLALSCF*SLEGPW
Trigger: CCAAGGACCCTCAAGAGACCAGAAGCAGCTTAGAGC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGTTCTTCCTGACTGCTaGGCAGGAGGTCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRVLPDC*AGGLLK
Trigger: TTTCAGGAGACCTCCTGCCCAGCAGTCAGGAAGAAC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACCGATTTCCTCTGCCTaGAAACCCTCCACGAGAATG +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRPISSA*KPSTRM
Trigger: CATTCTCGTGGAGGGTTTCCAGGCAGAGGAAATCGG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107793.8
3UTR CAA 72 bp TTACATGACAGTTTCCAAAATGGTTCTCGCTTTCCGTaGAAGATGGGCCGCCGTTGGGTTGTAATACACTCA +
Preference number: 4 (lower is better)
Translates to: LHDSFQNGSRFP*KMGRRWVVIHS
Trigger: TGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTTTGGAAACTGTCATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGACAAAGAAGGCAAAGATaGAGTCGTCGAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRQRRQR*SRRRPA
Trigger: TGCAGGCCTTCGACGACTTCATCTTTGCCTTCTTTG...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCCATCACAAAGTACATaGTGTCGACCCAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYPSQST*CRPSPP
Trigger: TGGAGGGCTGGGTCGACATCATGTACTTTGTGATGG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCGAAGAACTTCCCTTTaGAGAGCTGCACCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLRRTSL*RAAPQE
Trigger: TTCTTGGGGTGCAGCTCTTCAAAGGGAAGTTCTTCG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGGGCAGTGAAGCATTaGCCTCAATCTCTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIWAVKH*PQSLPA
Trigger: CGCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCA...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATTGGGCAGTGAAGCATTaGCCTCAATCTCTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYWAVKH*PQSLPA
Trigger: CGCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCA...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTATGGGCAGTGAAGCATTaGCCTCAATCTCTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILWAVKH*PQSLPA
Trigger: CGCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCA...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGGGGTTGATGGGCAGTaGAGCATTGACCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIGVDGQ*SIDLNL
Trigger: GAGATTGAGGTCAATGCTTCACTGCCCATCAACCCC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAAGTAGATGGGTGAGATaGCGGTGTTGTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSISRWVR*RCCSRW
Trigger: CCACCTGCTACAACACCGTCATCTCACCCATCTACT...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAAGTAGATGGGTGAGATaGCGGTGTTGTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILSRWVR*RCCSRW
Trigger: CCACCTGCTACAACACCGTCATCTCACCCATCTACT...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCTCAAGGGAGAAGCCTaGAGAGGCTGCTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSILKGEA*RGCSNV
Trigger: CACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTATCTGCTGGTTGGGAGTaGACAGACAAGATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILSAGWE*TDKMEP
Trigger: AGGCTCCATCTTGTCTGTTCACTCCCAACCAGCAGA...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGAGAAGCTGACATTCTaGAGGTCCAGCGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYEKLTF*RSSEYS
Trigger: GGAGTACTCGCTGGACCTGCAGAATGTCAGCTTCTC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGGGGTTGTGCTCGCCTaGAGAGCAGTTGGTATAGTA +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIGVVLA*RAVGIV
Trigger: TACTATACCAACTGCTCTGCAGGCGAGCACAACCCC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCCTTTGAAGGGGTTGTaGTCGCCTGCAGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIPLKGL*SPAEQL
Trigger: CAACTGCTCTGCAGGCGAGCACAACCCCTTCAAAGG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCTTTGAAGGGGTTGTaGTCGCCTGCAGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFPLKGL*SPAEQL
Trigger: CAACTGCTCTGCAGGCGAGCACAACCCCTTCAAAGG...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATAAGGGCTGGAGATTTTaGAGGAGCTATGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYKGWRF*RSYGRL
Trigger: GAGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTT...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGCCCTGAAGCCGACTTaGCATTACAGTCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRALKPT*HYSLGV
Trigger: AACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGCCCTGAAGCCGACTTaGCATTACAGTCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLALKPT*HYSLGV
Trigger: AACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATAAAGCACCAGCCCAGTaGCACCACCTTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYKAPAQ*HHLHCH
Trigger: ATGACAGTGAAGGTGGTGGCACTGGGCTGGTGCTTT...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTTGGTTCATGATGGGCTaGTGGTCCACTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIWFMMG*WSTPTA
Trigger: TGCTGTGGGAGTGGACCAGCAGCCCATCATGAACCA...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCAGAGTAGTAGGGTTTaGACTGGGCTTCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYQSSRV*TGLLTQ
Trigger: CTGCGTCAGAAGCCCAGTGCAAACCCTACTACTCTG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107789.8
ENSMUST00000107790.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGTTGCTCTCTTCCAGGTaGTTCATCAGCACGGCTATG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLLLSSR*FISTAM
Trigger: CATAGCCGTGCTGATGAAGCACCTGGAAGAGAGCAA...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGATTGCTCTCTTCCAGGTaGTTCATCAGCACGGCTATG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRLLSSR*FISTAM
Trigger: CATAGCCGTGCTGATGAAGCACCTGGAAGAGAGCAA...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCGGCAGTGCTCCCATTaGGGCACATGTAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSRQCSH*GTCSCH
Trigger: ATGACAGCTACATGTGCCGCAATGGGAGCACTGCCG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCGGCAGTGCTCCCATTaGGGCACATGTAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIRQCSH*GTCSCH
Trigger: ATGACAGCTACATGTGCCGCAATGGGAGCACTGCCG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGTGTCCAGCTCTAAGCTaGTTCTGGTCTCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLCPALS*FWSLEG
Trigger: ACCCTCAAGAGACCAGAAGCAGCTTAGAGCTGGACA...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCCAGTGTGATGACCTaGAAGATGGCGATCCAGGCA +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSISSVMT*KMAIQA
Trigger: TGCCTGGATCGCCATCTTCCAGGTCATCACACTGGA...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGACTCTCCCGTTGCTTaGTCTCAGAGAACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYDSPVA*SQRTVW
Trigger: CCACACAGTTCTCTGAGACCAAGCAACGGGAGAGTC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACTCTCCCGTTGCTTaGTCTCAGAGAACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILDSPVA*SQRTVW
Trigger: CCACACAGTTCTCTGAGACCAAGCAACGGGAGAGTC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGGCTGGTATGCACAGTaGGGTATACCTTCCCACTAC +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILGWYAQ*GIPSHY
Trigger: GTAGTGGGAAGGTATACCCCACTGTGCATACCAGCC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTATCTCTGGTGGAGGGCTaGTATGCACAGTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILSLVEG*YAQWGI
Trigger: TATACCCCACTGTGCATACCAGCCCTCCACCAGAGA...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCAGCCCAAGATGACGTaGAGGCCATGCCGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYQPKMT*RPCRCK
Trigger: TTTACAACGGCATGGCCTCCACGTCATCTTGGGCTG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACAGCCCAAGATGACGTaGAGGCCATGCCGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIQPKMT*RPCRCK
Trigger: TTTACAACGGCATGGCCTCCACGTCATCTTGGGCTG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCGCATGCCGAGAATCTTaGTGCCGCTGTCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSACRES*CRCQRP
Trigger: TGGTCTCTGACAGCGGCACCAAGATTCTCGGCATGC...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTTTCATGATGGGCTGCTaGTCCACTCCCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIFMMGC*STPTAS
Trigger: GGATGCTGTGGGAGTGGACCAGCAGCCCATCATGAA...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGAGTGAACAGACAAGATaGAGCCTGACTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLSEQTR*SLTGLW
Trigger: CCAAAGCCCAGTCAGGCTCCATCTTGTCTGTTCACT...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGCAGCTGGTGTCTGCTaGTTGGGAGTGAACAGACAA +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYAAGVC*LGVNRQ
Trigger: TTGTCTGTTCACTCCCAACCAGCAGACACCAGCTGC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGCTCTAAGCTGCTTCTaGTCTCTTGAGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYALSCF*SLEGPW
Trigger: CCAAGGACCCTCAAGAGACCAGAAGCAGCTTAGAGC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGGGATCCAGGTCTGTTaGGTCAGAAGACAAACCAGA +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRGIQVC*VRRQTR
Trigger: TCTGGTTTGTCTTCTGACCCAACAGACCTGGATCCC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACCGATTTCCTCTGCCTaGAAACCCTCCACGAGAATG +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIPISSA*KPSTRM
Trigger: CATTCTCGTGGAGGGTTTCCAGGCAGAGGAAATCGG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCATCACAAAGTACATaGTGTCGACCCAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFPSQST*CRPSPP
Trigger: TGGAGGGCTGGGTCGACATCATGTACTTTGTGATGG...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCCATCACAAAGTACATaGTGTCGACCCAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSPSQST*CRPSPP
Trigger: TGGAGGGCTGGGTCGACATCATGTACTTTGTGATGG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCACAGCCTCACTGTCTaGGTCAGGCATTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSHSLTV*VRHFMV
Trigger: GACCATGAAATGCCTGACTCAGACAGTGAGGCTGTG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCGAATCTGAAAGACAGTaGCAATGGCCCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSESERQ*QWPRAG
Trigger: CCCTGCTCTGGGCCATTGTCACTGTCTTTCAGATTC...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGAATCTGAAAGACAGTaGCAATGGCCCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIESERQ*QWPRAG
Trigger: CCCTGCTCTGGGCCATTGTCACTGTCTTTCAGATTC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAAAAGAAATCAGGCTCTaGCTCAGACTTGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRKEIRL*LRLGGI
Trigger: GATGCCACCAAGTCTGAGTCAGAGCCTGATTTCTTT...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACAGGAGACGAAACCTTaGCTGGGGAGGGAAGATATA +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILQETKP*LGREDI
Trigger: TATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACAGGAGACGAAACCTTaGCTGGGGAGGGAAGATATA +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIQETKP*LGREDI
Trigger: TATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCTGGGTGATGATCCGGTaGCACAGGAGACGAAACCTT +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFWVMIR*HRRRNL
Trigger: AAGGTTTCGTCTCCTGTGTCACCGGATCATCACCCA...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAAATGGGTTTGAGGGATaGCATCAGAGTCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRNGFEG*HQSLYH
Trigger: GTGGTAGAGACTCTGATGTCATCCCTCAAACCCATT...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACGAAGAACTTCCCTTTaGAGAGCTGCACCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIRRTSL*RAAPQE
Trigger: TTCTTGGGGTGCAGCTCTTCAAAGGGAAGTTCTTCG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTAGTAGATGGGTGAGATaGCGGTGTTGTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSISRWVR*RCCSRW
Trigger: CCACCTGCTACAACACCGTCATCTCACCCATCTACT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACACGAAGTAGATGGGTaGGATGACGGTGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIHEVDG*DDGVVA
Trigger: TGCTACAACACCGTCATCTCACCCATCTACTTCGTG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGAGAAGCTGACATTCTaGAGGTCCAGCGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIEKLTF*RSSEYS
Trigger: GGAGTACTCGCTGGACCTGCAGAATGTCAGCTTCTC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCTGGCTCAGAGAAGCTTaGCAGGGTGCTAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSWLREA*QGASIG
Trigger: TCCAATGCTAGCACCCTGGCAAGCTTCTCTGAGCCA...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGATTGCAACCAAAAAGGTaGATGCCCAGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRLQPKR*MPRMLK
Trigger: CTTCAGCATCCTGGGCATGCACCTTTTTGGTTGCAA...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGCCCTGAAGCCGACTTaGCATTACAGTCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIALKPT*HYSLGV
Trigger: AACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCCCCTTTGCTCAGGTTaGCCTCATCATCGCCATCAT +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSPLCSG*PHHRHH
Trigger: ATGATGGCGATGATGAGGGCAACCTGAGCAAAGGGG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGTTCAGCCAGGAAGACTaGCGTGAAGATGTAGTTGGA +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLFSQED*REDVVG
Trigger: TCCAACTACATCTTCACGGCAGTCTTCCTGGCTGAA...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTAAAGCACCAGCCCAGTaGCACCACCTTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIKAPAQ*HHLHCH
Trigger: ATGACAGTGAAGGTGGTGGCACTGGGCTGGTGCTTT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCAAAGCACCAGCCCAGTaGCACCACCTTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFKAPAQ*HHLHCH
Trigger: ATGACAGTGAAGGTGGTGGCACTGGGCTGGTGCTTT...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCAGAGTAGTAGGGTTTaGACTGGGCTTCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIQSSRV*TGLLTQ
Trigger: CTGCGTCAGAAGCCCAGTGCAAACCCTACTACTCTG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107789.8
ENSMUST00000107790.8
CDS-3UTR GCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCGATGCAGCTGGTGTCTaGTGGTTGGGAGTGAACAGA +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSDAAGV*WLGVNR
Trigger: TCTGTTCACTCCCAACCAGCAGACACCAGCTGCATC...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGTCCAGCTCTAAGCTaGTTCTGGTCTCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSICPALS*FWSLEG
Trigger: ACCCTCAAGAGACCAGAAGCAGCTTAGAGCTGGACA...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATTGTCCAGCTCTAAGCTaGTTCTGGTCTCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYCPALS*FWSLEG
Trigger: ACCCTCAAGAGACCAGAAGCAGCTTAGAGCTGGACA...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCTCCAGTGTGATGACCTaGAAGATGGCGATCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFSSVMT*KMAIQA
Trigger: TGCCTGGATCGCCATCTTCCAGGTCATCACACTGGA...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCGGCTGGTATGCACAGTaGGGTATACCTTCCCACTAC +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSGWYAQ*GIPSHY
Trigger: GTAGTGGGAAGGTATACCCCACTGTGCATACCAGCC...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTATCCTTCAGCATCTCTaGTGGAGGGCTGGTATGCAC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIILQHL*WRAGMH
Trigger: GTGCATACCAGCCCTCCACCAGAGATGCTGAAGGAT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCAGCCCAAGATGACGTaGAGGCCATGCCGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSQPKMT*RPCRCK
Trigger: TTTACAACGGCATGGCCTCCACGTCATCTTGGGCTG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCAGGGACATCAGAGCCTaGCCCAGGTTGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFRDIRA*PRLSKL
Trigger: CAACTTTGACAACCTGGGCCAGGCTCTGATGTCCCT...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATAGTGAACAGACAAGATaGAGCCTGACTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYSEQTR*SLTGLW
Trigger: CCAAAGCCCAGTCAGGCTCCATCTTGTCTGTTCACT...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCGCAGCTGGTGTCTGCTaGTTGGGAGTGAACAGACAA +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSAAGVC*LGVNRQ
Trigger: TTGTCTGTTCACTCCCAACCAGCAGACACCAGCTGC...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGATAGTGTGCATCTTTaGGAAGCTGTAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRDSVHL*EAVGCS
Trigger: GCTGCATCCTACAGCTTCCCAAAGATGCACACTATC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGATAGTGTGCATCTTTaGGAAGCTGTAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLDSVHL*EAVGCS
Trigger: GCTGCATCCTACAGCTTCCCAAAGATGCACACTATC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGGGATCCAGGTCTGTTaGGTCAGAAGACAAACCAGA +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIGIQVC*VRRQTR
Trigger: TCTGGTTTGTCTTCTGACCCAACAGACCTGGATCCC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGGGATCCAGGTCTGTTaGGTCAGAAGACAAACCAGA +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYGIQVC*VRRQTR
Trigger: TCTGGTTTGTCTTCTGACCCAACAGACCTGGATCCC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATAGTATTGGTTCCAGTTaGCACAGGTGGTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYSIGSS*HRWYCW
Trigger: CCAGCAATACCACCTGTGTCAACTGGAACCAATACT...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCTGTACACCAGGTACTTaGGAAGCTCCTCATAGCAGC +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFCTPGT*EAPHSS
Trigger: GCTGCTATGAGGAGCTTCTCAAGTACCTGGTGTACA...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAAAAGAAATCAGGCTCTaGCTCAGACTTGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIKEIRL*LRLGGI
Trigger: GATGCCACCAAGTCTGAGTCAGAGCCTGATTTCTTT...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATAAAGAAATCAGGCTCTaGCTCAGACTTGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYKEIRL*LRLGGI
Trigger: GATGCCACCAAGTCTGAGTCAGAGCCTGATTTCTTT...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAAATGGGTTTGAGGGATaGCATCAGAGTCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILNGFEG*HQSLYH
Trigger: GTGGTAGAGACTCTGATGTCATCCCTCAAACCCATT...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCGAAGAACTTCCCTTTaGAGAGCTGCACCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIRRTSL*RAAPQE
Trigger: TTCTTGGGGTGCAGCTCTTCAAAGGGAAGTTCTTCG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCACGAAGTAGATGGGTaGGATGACGGTGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIHEVDG*DDGVVA
Trigger: TGCTACAACACCGTCATCTCACCCATCTACTTCGTG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGAGTTGACAGGCAGCTaGATACAGCTTAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYELTGS*IQLNCP
Trigger: TGGACAGTTAAGCTGTATTCAGCTGCCTGTCAACTC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATTGCAACCAAAAAGGTaGATGCCCAGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSILQPKR*MPRMLK
Trigger: CTTCAGCATCCTGGGCATGCACCTTTTTGGTTGCAA...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGCCCTGAAGCCGACTTaGCATTACAGTCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIALKPT*HYSLGV
Trigger: AACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATTCAGCCAGGAAGACTaGCGTGAAGATGTAGTTGGA +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIFSQED*REDVVG
Trigger: TCCAACTACATCTTCACGGCAGTCTTCCTGGCTGAA...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTTTGCTCTCTTCCAGGTaGTTCATCAGCACGGCTATG +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSILLSSR*FISTAM
Trigger: CATAGCCGTGCTGATGAAGCACCTGGAAGAGAGCAA...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCTGTCCAGCTCTAAGCTaGTTCTGGTCTCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSCPALS*FWSLEG
Trigger: ACCCTCAAGAGACCAGAAGCAGCTTAGAGCTGGACA...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGGTCAAAGGAACTCTTaGCCTCACGTTCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIGQRNS*PHVPRN
Trigger: GTTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCAGTGAACAGACAAGATaGAGCCTGACTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSSEQTR*SLTGLW
Trigger: CCAAAGCCCAGTCAGGCTCCATCTTGTCTGTTCACT...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGATAGTGTGCATCTTTaGGAAGCTGTAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYDSVHL*EAVGCS
Trigger: GCTGCATCCTACAGCTTCCCAAAGATGCACACTATC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATAGTGTGCATCTTTaGGAAGCTGTAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILDSVHL*EAVGCS
Trigger: GCTGCATCCTACAGCTTCCCAAAGATGCACACTATC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCAGTATTGGTTCCAGTTaGCACAGGTGGTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFSIGSS*HRWYCW
Trigger: CCAGCAATACCACCTGTGTCAACTGGAACCAATACT...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCAGTATTGGTTCCAGTTaGCACAGGTGGTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSSIGSS*HRWYCW
Trigger: CCAGCAATACCACCTGTGTCAACTGGAACCAATACT...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTAAAGAAATCAGGCTCTaGCTCAGACTTGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIKEIRL*LRLGGI
Trigger: GATGCCACCAAGTCTGAGTCAGAGCCTGATTTCTTT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCAATGGGTTTGAGGGATaGCATCAGAGTCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFNGFEG*HQSLYH
Trigger: GTGGTAGAGACTCTGATGTCATCCCTCAAACCCATT...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCTTGCAACCAAAAAGGTaGATGCCCAGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PTENDDEVKGENKLHDSFLQPKR*MPRMLK
Trigger: CTTCAGCATCCTGGGCATGCACCTTTTTGGTTGCAA...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR GCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTTTCAGCCAGGAAGACTaGCGTGAAGATGTAGTTGGA +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIFSQED*REDVVG
Trigger: TCCAACTACATCTTCACGGCAGTCTTCCTGGCTGAA...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGATAGTGTGCATCTTTaGGAAGCTGTAGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIDSVHL*EAVGCS
Trigger: GCTGCATCCTACAGCTTCCCAAAGATGCACACTATC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACACAAGTTTGAATACTaGCTCCAAGACAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRHKFEY*LQDKDD
Trigger: GTCATCTTTGTCTTGGAGTCAGTATTCAAACTTGTG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACACAAGTTTGAATACTaGCTCCAAGACAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIHKFEY*LQDKDD
Trigger: GTCATCTTTGTCTTGGAGTCAGTATTCAAACTTGTG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR TCA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCACAAGTTTGAATACTaGCTCCAAGACAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIHKFEY*LQDKDD
Trigger: GTCATCTTTGTCTTGGAGTCAGTATTCAAACTTGTG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp GGGTCGGAGTCGCCCGGGCTGGGGGCGGAAGGGAAGGCAGAGGGCTaGCCCCCTGGGCCTGCCAGCTCGTCCATCAGCTTCAGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: GSESPGLGAEGKAEG*PPGPASSSISFSSP
Trigger: GGGGGAGCTGAAGCTGATGGACGAGCTGGCAGGCCCAGGGGGCCAGCCCTCTGCCTTCCCTTCCGCCCCCAGCCCGGGCGACTCCGACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS TCA 90 bp TGGAGGCCGAGGGATCCTTCGAGTCACTGGCCGGCGCCCTCCTCCTaGGGCAGACGCCAGGACTGCATGGGGGCCGAGGGCCCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: WRPRDPSSHWPAPSS*GRRQDCMGAEGPGS
Trigger: AGAGCCAGGGCCCTCGGCCCCCATGCAGTCCTGGCGTCTGCCTCAGGAGGAGGGCGCCGGCCAGTGACTCGAAGGATCCCTCGGCCTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp AGAGCAGCTGCCACTGGGCTGGGGCTCCTGCCCACCACGGGCCACTaGGCTGCTGAGCAACCCAGCCCGCACGCCTACAGCCCTAGAGAC +
Preference number: 5 (lower is better)
Translates to: RAAATGLGLLPTTGH*AAEQPSPHAYSPRD
Trigger: GTCTCTAGGGCTGTAGGCGTGCGGGCTGGGTTGCTCAGCAGCCCAGTGGCCCGTGGTGGGCAGGAGCCCCAGCCCAGTGGCAGCTGCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 90 bp GGACCAGGTGGTGGACAGACAGACGACGGTGTGAACGAGAGCAGCTaGCACTGGGCTGGGGCTCCTGCCCACCACGGGCCACTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: GPGGGQTDDGVNESS*HWAGAPAHHGPLGC
Trigger: GCAGCCCAGTGGCCCGTGGTGGGCAGGAGCCCCAGCCCAGTGGCAGCTGCTCTCGTTCACACCGTCGTCTGTCTGTCCACCACCTGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 90 bp CCAGGCCTGGGCAAGGGGCTGGCAGGCGGATGTGCTTGGAGACTTTaGTCTGGCTGCCGGAGCGCTGCTGCACCTGGATGCTCGACCCGC +
Preference number: 5 (lower is better)
Translates to: PGLGKGLAGGCAWRL*SGCRSAAAPGCSTR
Trigger: GCGGGTCGAGCATCCAGGTGCAGCAGCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGCCCCTTGCCCAGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 90 bp GCCCAGCTGGGTTCCAGGCCTGGGCAAGGGGCTGGCAGGCGGATGTaGTTGGAGACTTTGCTCTGGCTGCCGGAGCGCTGCTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: AQLGSRPGQGAGRRM*LETLLWLPERCCTW
Trigger: CCAGGTGCAGCAGCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGCCCCTTGCCCAGGCCTGGAACCCAGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp AGTCCAGACCGCAGGGTGGACCACCACCGCCTTCCCCGCGCAGTGTaGGCACGCTCCTGCAGGATCGCATGCCGTTCTCCCGAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: SPDRRVDHHRLPRAV*ARSCRIACRSPEAE
Trigger: CTCAGCCTCGGGAGAACGGCATGCGATCCTGCAGGAGCGTGCCCACACTGCGCGGGGAAGGCGGTGGTGGTCCACCCTGCGGTCTGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 90 bp GGCAAGGGGCTGGCAGGCGGATGTGCTTGGAGACTTTGCTCTGGCTaGCGGAGCGCTGCTGCACCTGGATGCTCGACCCGCCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GKGLAGGCAWRLCSG*RSAAAPGCSTRPRR
Trigger: CCTTCTGGGGCGGGTCGAGCATCCAGGTGCAGCAGCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGCCCCTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 90 bp GGCAGGCGGATGTGCTTGGAGACTTTGCTCTGGCTGCCGGAGCGCTaGTGCACCTGGATGCTCGACCCGCCCCAGAAGGATGAGGAGCGG +
Preference number: 5 (lower is better)
Translates to: GRRMCLETLLWLPER*CTWMLDPPQKDEER
Trigger: CCGCTCCTCATCCTTCTGGGGCGGGTCGAGCATCCAGGTGCAGCAGCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACATCCGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp GGGCTGCTGAGCAACCCAGCCCGCACGCCTACAGCCCTAGAGACCTaGGCCAGCCTGCGGGCTGCTTTGCGGAGGATGTACACCAGGTAC +
Preference number: 5 (lower is better)
Translates to: GLLSNPARTPTALET*ASLRAALRRMYTRY
Trigger: GTACCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGCTGGCCCAGGTCTCTAGGGCTGTAGGCGTGCGGGCTGGGTTGCTCAGCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp AGCTGGGTTCCAGGCCTGGGCAAGGGGCTGGCAGGCGGATGTGCTTaGAGACTTTGCTCTGGCTGCCGGAGCGCTGCTGCACCTGGATGC +
Preference number: 5 (lower is better)
Translates to: SWVPGLGKGLAGGCA*RLCSGCRSAAAPGC
Trigger: GCATCCAGGTGCAGCAGCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGCCCCTTGCCCAGGCCTGGAACCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 90 bp TGTGTCGCAGATCAGCCTCCAGAAGGCCAGCACAGAACTAGGCTCTaGATCTGGGCCCAGGCTCGGCCGTCGCCGTCTGTGGGGATCCCG +
Preference number: 5 (lower is better)
Translates to: CVADQPPEGQHRTRL*IWAQARPSPSVGIP
Trigger: CGGGATCCCCACAGACGGCGACGGCCGAGCCTGGGCCCAGATGCAGAGCCTAGTTCTGTGCTGGCCTTCTGGAGGCTGATCTGCGACACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 90 bp AGGCGGATGTGCTTGGAGACTTTGCTCTGGCTGCCGGAGCGCTGCTaGACCTGGATGCTCGACCCGCCCCAGAAGGATGAGGAGCGGGTC +
Preference number: 5 (lower is better)
Translates to: RRMCLETLLWLPERC*TWMLDPPQKDEERV
Trigger: GACCCGCTCCTCATCCTTCTGGGGCGGGTCGAGCATCCAGGTGCAGCAGCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACATCCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp GGTGGTGGCAGCATGAGCCAGCGGGACCCATTGGCATCCCTGTCCTaGATCTCTGGGCTGGCCCGGGGAACTCTGAGCGTCCCATTACCC +
Preference number: 5 (lower is better)
Translates to: GGGSMSQRDPLASLS*ISGLARGTLSVPLP
Trigger: GGGTAATGGGACGCTCAGAGTTCCCCGGGCCAGCCCAGAGATCCAGGACAGGGATGCCAATGGGTCCCGCTGGCTCATGCTGCCACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp GCTCCGTGTCCAGCTCTAAGCTGCTTCTGGTCTCTTGAGGGTCCTTaGCCCAGCTGGGTTCCAGGCCTGGGCAAGGGGCTGGCAGGCGGA +
Preference number: 5 (lower is better)
Translates to: APCPALSCFWSLEGP*PSWVPGLGKGLAGG
Trigger: TCCGCCTGCCAGCCCCTTGCCCAGGCCTGGAACCCAGCTGGGCCAAGGACCCTCAAGAGACCAGAAGCAGCTTAGAGCTGGACACGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 90 bp AGGGGCTTGGACATAGGCGGGGCTGGGAGCCGCTGTCCAGGCAGCTaGCAGCGATGGAGTGTCTCCTCTGTTCGTCTAGCCAGGACCCAG +
Preference number: 5 (lower is better)
Translates to: RGLDIGGAGSRCPGS*QRWSVSSVRLARTQ
Trigger: CTGGGTCCTGGCTAGACGAACAGAGGAGACACTCCATCGCTGTCAGCTGCCTGGACAGCGGCTCCCAGCCCCGCCTATGTCCAAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp ATGTGCTTGGAGACTTTGCTCTGGCTGCCGGAGCGCTGCTGCACCTaGATGCTCGACCCGCCCCAGAAGGATGAGGAGCGGGTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: MCLETLLWLPERCCT*MLDPPQKDEERVRG
Trigger: CCCTCTGACCCGCTCCTCATCCTTCTGGGGCGGGTCGAGCATCCAGGTGCAGCAGCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 90 bp GGTCATCAGCCCGCAGGGTGCGGGCCAAACGCCCTGAAGCCGACTTaGCATTACAGTCTTGGTGTTCAGAGGCAGAGCTCCGACCGCTGG +
Preference number: 5 (lower is better)
Translates to: GHQPAGCGPNALKPT*HYSLGVQRQSSDRW
Trigger: CCAGCGGTCGGAGCTCTGCCTCTGAACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGCGTTTGGCCCGCACCCTGCGGGCTGATGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 90 bp GGCCCACTCACCTCTGACAACAGGTCTTCCCGGCTACCCAGGCCCTaGACGTCCAGGGAGTCAGTCCTTATTGCTGCCTGGCGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: GPLTSDNRSSRLPRP*TSRESVLIAAWRLR
Trigger: TCTCAGGCGCCAGGCAGCAATAAGGACTGACTCCCTGGACGTGCAGGGCCTGGGTAGCCGGGAAGACCTGTTGTCAGAGGTGAGTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp CAGCATGAGCCAGCGGGACCCATTGGCATCCCTGTCCTGGATCTCTaGGCTGGCCCGGGGAACTCTGAGCGTCCCATTACCCAGGTGGTA +
Preference number: 5 (lower is better)
Translates to: QHEPAGPIGIPVLDL*AGPGNSERPITQVV
Trigger: TACCACCTGGGTAATGGGACGCTCAGAGTTCCCCGGGCCAGCCCAGAGATCCAGGACAGGGATGCCAATGGGTCCCGCTGGCTCATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp TCATCTCATGATGGGCAGTTCCAGGCTCAGCGGACCCACTGCTACTaGTGCGGCGAGAGCCAGAGCCCAGTGCTTCCCCCACACCTGTGC +
Preference number: 5 (lower is better)
Translates to: SSHDGQFQAQRTHCY*CGESQSPVLPPHLC
Trigger: GCACAGGTGTGGGGGAAGCACTGGGCTCTGGCTCTCGCCGCACCAGTAGCAGTGGGTCCGCTGAGCCTGGAACTGCCCATCATGAGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp TCCGTGGGGTGCTCAAGGGAGAAGCCTGAAGAGGCTGCTCCAATGTaGGCCGTGGTGTGTGGAGCCCCAGGCTTAGGGCTGTCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: SVGCSREKPEEAAPM*AVVCGAPGLGLSGL
Trigger: TAGCCCTGACAGCCCTAAGCCTGGGGCTCCACACACCACGGCCCACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAGCACCCCACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS TCA 90 bp AGGCTCGGCCGTCGCCGTCTGTGGGGATCCCGGAGGTCGCTGTGCTaGGCGTCCTGTGTGAACTCATACACAGCCTCACTGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: RLGRRRLWGSRRSLC*ASCVNSYTASLSES
Trigger: TGACTCAGACAGTGAGGCTGTGTATGAGTTCACACAGGACGCTCAGCACAGCGACCTCCGGGATCCCCACAGACGGCGACGGCCGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 90 bp CCTGTGGCGATGATCACTGCCTGCTGGGCTGGCCCGGTCCTCTTCTaGACTCTCCTCCTCATCCTGGCTCTCCTGACCCTCTCCAGACAG +
Preference number: 5 (lower is better)
Translates to: PVAMITACWAGPVLF*TLLLILALLTLSRQ
Trigger: CTGTCTGGAGAGGGTCAGGAGAGCCAGGATGAGGAGGAGAGTTCAGAAGAGGACCGGGCCAGCCCAGCAGGCAGTGATCATCGCCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 90 bp CTCCTCAGTGTGAGGTACCATCGTGGGGTGCTCAAGGGAGAAGCCTaGAGAGGCTGCTCCAATGTGGGCCGTGGTGTGTGGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LLSVRYHRGVLKGEA*RGCSNVGRGVWSPR
Trigger: CCTGGGGCTCCACACACCACGGCCCACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAGCACCCCACGATGGTACCTCACACTGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp GGTATTGCTGGAACTGTTATAGGCCTCATAGTCCAGACCGCAGGGTaGACCACCACCGCCTTCCCCGCGCAGTGTGGGCACGCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: GIAGTVIGLIVQTAG*TTTAFPAQCGHAPA
Trigger: TGCAGGAGCGTGCCCACACTGCGCGGGGAAGGCGGTGGTGGTCCACCCTGCGGTCTGGACTATGAGGCCTATAACAGTTCCAGCAATACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp AGATGCCTCCGATGGGGACCTGGGAGGGGGCGCCTGGCAACGGACTaGCTCCAAGTGGCAGTCAGCATGGTAGAAGCTGTGTACAGACTC +
Preference number: 5 (lower is better)
Translates to: RCLRWGPGRGRLATD*LQVAVSMVEAVYRL
Trigger: GAGTCTGTACACAGCTTCTACCATGCTGACTGCCACTTGGAGCCAGTCCGTTGCCAGGCGCCCCCTCCCAGGTCCCCATCGGAGGCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp ATCGTGGGGTGCTCAAGGGAGAAGCCTGAAGAGGCTGCTCCAATGTaGGCCGTGGTGTGTGGAGCCCCAGGCTTAGGGCTGTCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: IVGCSREKPEEAAPM*AVVCGAPGLGLSGL
Trigger: TAGCCCTGACAGCCCTAAGCCTGGGGCTCCACACACCACGGCCCACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAGCACCCCACGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCAGCCTGCGGGCTGCTTaGCGGAGGATGTACACCAGG +
Preference number: 5 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCSLRAA*RRMYTR
Trigger: CCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGCT...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 90 bp CAGTCTTGGTGTTCAGAGGCAGAGCTCCGACCGCTGGCTGTTCGATaGAGCCCGGGCACCTGCAGGGTGTCAGGCAGGTCAAAGGAACTC +
Preference number: 5 (lower is better)
Translates to: QSWCSEAELRPLAVR*SPGTCRVSGRSKEL
Trigger: GAGTTCCTTTGACCTGCCTGACACCCTGCAGGTGCCCGGGCTTCATCGAACAGCCAGCGGTCGGAGCTCTGCCTCTGAACACCAAGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 90 bp AGCCCGCACGCCTACAGCCCTAGAGACCTGGGCCAGCCTGCGGGCTaGTTTGCGGAGGATGTACACCAGGTACTTGAGAAGCTCCTCATA +
Preference number: 5 (lower is better)
Translates to: SPHAYSPRDLGQPAG*FAEDVHQVLEKLLI
Trigger: TATGAGGAGCTTCTCAAGTACCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGCTGGCCCAGGTCTCTAGGGCTGTAGGCGTGCGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 90 bp AGGGGTTCTTCCTCTGACAACAGGTCTTCCCGGCTACCCAGGCCCTaGACGTCCAGGGAGTCAGTCCTTATTGCTGCCTGGCGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: RGSSSDNRSSRLPRP*TSRESVLIAAWRLR
Trigger: TCTCAGGCGCCAGGCAGCAATAAGGACTGACTCCCTGGACGTGCAGGGCCTGGGTAGCCGGGAAGACCTGTTGTCAGAGGAAGAACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107785.2
CDS CCA 90 bp GAAGCCCGGGCACCTGCAGGGTGTCAGGCAGGTCAAAGGAACTCTTaGCCTCACGTTCCAAGGAACCCCTGTGGCGATGATCACTGCCTG +
Preference number: 5 (lower is better)
Translates to: EARAPAGCQAGQRNS*PHVPRNPCGDDHCL
Trigger: CAGGCAGTGATCATCGCCACAGGGGTTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACCTGCCTGACACCCTGCAGGTGCCCGGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp TCAGCTTCAGCTCCCCCTCCAGGGAGCCCTGGATCAGCAGGGAGATaGTGTCAAACAGCTGTCTGTCCGTGGGGTGCTCAAGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: SASAPPPGSPGSAGR*CQTAVCPWGAQGRS
Trigger: GCTTCTCCCTTGAGCACCCCACGGACAGACAGCTGTTTGACACCATCTCCCTGCTGATCCAGGGCTCCCTGGAGGGGGAGCTGAAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS-3UTR CAA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGAGCCTGCGGGCTGCTTaGCGGAGGATGTACACCAGG +
Preference number: 5 (lower is better)
Translates to: HGTFQKDCPGGGARICTQSLRAA*RRMYTR
Trigger: CCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGCT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGAGCCAGCGGGACCCATaGGCATCCCTGTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: HGTFQKDCPGGGARICTQSQRDP*ASLSWI
Trigger: GATCCAGGACAGGGATGCCAATGGGTCCCGCTGGCT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGGCTCTGACTCAGACTaGGTGGCATCTCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCGSDSD*VASPSA
Trigger: GGCAGAGGGAGATGCCACCAAGTCTGAGTCAGAGCC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000021234.15
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CAA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCATGTGCTTGGAGACTTaGCTCTGGCTGCCGGAGCGC +
Preference number: 5 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCMCLET*LWLPER
Trigger: GCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACAT...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGCTGCTTCTGGTCTCTaGAGGGTCCTTGGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCAASGL*RVLGPA
Trigger: AGCTGGGCCAAGGACCCTCAAGAGACCAGAAGCAGC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 90 bp GGAGGTCTCCTGAAATCCAGCTCAGCTCCGTGTCCAGCTCTAAGCTaGTTCTGGTCTCTTGAGGGTCCTTGGCCCAGCTGGGTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GGLLKSSSAPCPALS*FWSLEGPWPSWVPG
Trigger: GCCTGGAACCCAGCTGGGCCAAGGACCCTCAAGAGACCAGAAGCAGCTTAGAGCTGGACACGGAGCTGAGCTGGATTTCAGGAGACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp ACTTGCCATTACAGTCTTGGTGTTCAGAGGCAGAGCTCCGACCGCTaGCTGTTCGATGAAGCCCGGGCACCTGCAGGGTGTCAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: TCHYSLGVQRQSSDR*LFDEARAPAGCQAG
Trigger: ACCTGCCTGACACCCTGCAGGTGCCCGGGCTTCATCGAACAGCCAGCGGTCGGAGCTCTGCCTCTGAACACCAAGACTGTAATGGCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGCCAGCGGGACCCATaGGCATCCCTGTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: ACHPSATEEGMRGASWLLSQRDP*ASLSWI
Trigger: GATCCAGGACAGGGATGCCAATGGGTCCCGCTGGCT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCCCTGTGCTGGAGCTCTaGGGCAGTGACATCGGTGTA +
Preference number: 5 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCPVLEL*GSDIGV
Trigger: TACACCGATGTCACTGCCCAAGAGCTCCAGCACAGG...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCAGCATGCCGAGAATCTaGGTGCCGCTGTCAGAGACC +
Preference number: 5 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCSMPRI*VPLSET
Trigger: GGTCTCTGACAGCGGCACCAAGATTCTCGGCATGCT...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGCTGCTTCTGGTCTCTaGAGGGTCCTTGGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAAASGL*RVLGPA
Trigger: AGCTGGGCCAAGGACCCTCAAGAGACCAGAAGCAGC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 90 bp TGGATCAGCAGGGAGATGGTGTCAAACAGCTGTCTGTCCGTGGGGTaGTCAAGGGAGAAGCCTGAAGAGGCTGCTCCAATGTGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: WISREMVSNSCLSVG*SREKPEEAAPMWAV
Trigger: CACGGCCCACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAGCACCCCACGGACAGACAGCTGTTTGACACCATCTCCCTGCTGATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS CCA 90 bp AGCCCTGGATCAGCAGGGAGATGGTGTCAAACAGCTGTCTGTCCGTaGGGTGCTCAAGGGAGAAGCCTGAAGAGGCTGCTCCAATGTGGG +
Preference number: 5 (lower is better)
Translates to: SPGSAGRWCQTAVCP*GAQGRSLKRLLQCG
Trigger: CCCACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAGCACCCCACGGACAGACAGCTGTTTGACACCATCTCCCTGCTGATCCAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS-3UTR CAA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCGCCCCAGACAGGTCGTaGAGCTGCGTGAAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSAPDRS*SCVKLR
Trigger: CCGGAGCTTCACGCAGCTCAACGACCTGTCTGGGGC...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAAGCCTGCGGGCTGCTTaGCGGAGGATGTACACCAGG +
Preference number: 5 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLSLRAA*RRMYTR
Trigger: CCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGCT...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACAGCCTGCGGGCTGCTTaGCGGAGGATGTACACCAGG +
Preference number: 5 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHSLRAA*RRMYTR
Trigger: CCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGCT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACAGCCAGCGGGACCCATaGGCATCCCTGTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHSQRDP*ASLSWI
Trigger: GATCCAGGACAGGGATGCCAATGGGTCCCGCTGGCT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTAGCCAGCGGGACCCATaGGCATCCCTGTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: LSGSPACHPSATEEGMRGSQRDP*ASLSWI
Trigger: GATCCAGGACAGGGATGCCAATGGGTCCCGCTGGCT...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGAGCCAGCGGGACCCATaGGCATCCCTGTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: HSRPPACALQEEGIELDWSQRDP*ASLSWI
Trigger: GATCCAGGACAGGGATGCCAATGGGTCCCGCTGGCT...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCCAAGGGCTGGAGATTTaGCAGGAGCTATGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCQGLEI*QELWQA
Trigger: AGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTTG...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCCGCCCTGAAGCCGACTaGCCATTACAGTCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCRPEAD*PLQSWC
Trigger: ACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGCG...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCTGTGGGGGTCAATTTaGGGGCGCTCCATAGCGATG +
Preference number: 5 (lower is better)
Translates to: LKMGRRWVVIHSRPPACALWGSI*GRSIAM
Trigger: CATCGCTATGGAGCGCCCCAAAATTGACCCCCACAG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGAGCATGCCGAGAATCTaGGTGCCGCTGTCAGAGACC +
Preference number: 5 (lower is better)
Translates to: HGTFQKDCPGGGARICTQSMPRI*VPLSET
Trigger: GGTCTCTGACAGCGGCACCAAGATTCTCGGCATGCT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGGGCTGTCAGGGCTATaGACACCTTCCACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHGLSGL*TPSTPG
Trigger: GCCTGGGGTGGAAGGTGTCAATAGCCCTGACAGCCC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGGGCTGTCAGGGCTATaGACACCTTCCACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAGLSGL*TPSTPG
Trigger: GCCTGGGGTGGAAGGTGTCAATAGCCCTGACAGCCC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGGGCTGTCAGGGCTATaGACACCTTCCACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LSGSPACHPSATEEGMRGGLSGL*TPSTPG
Trigger: GCCTGGGGTGGAAGGTGTCAATAGCCCTGACAGCCC...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTATGTGCTTGGAGACTTaGCTCTGGCTGCCGGAGCGC +
Preference number: 5 (lower is better)
Translates to: ACHPSATEEGMRGASWLLMCLET*LWLPER
Trigger: GCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACAT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAATGTGCTTGGAGACTTaGCTCTGGCTGCCGGAGCGC +
Preference number: 5 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAMCLET*LWLPER
Trigger: GCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACAT...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 90 bp GCTGTGCTGAGCGTCCTGTGTGAACTCATACACAGCCTCACTGTCTaGGTCAGGCATTTCATGGTCAGCGGACTCTGGCTCCCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: AVLSVLCELIHSLTV*VRHFMVSGLWLPCS
Trigger: GGAGCAGGGGAGCCAGAGTCCGCTGACCATGAAATGCCTGACTCAGACAGTGAGGCTGTGTATGAGTTCACACAGGACGCTCAGCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 90 bp GCCGTCTGTGGGGATCCCGGAGGTCGCTGTGCTGAGCGTCCTGTGTaGACTCATACACAGCCTCACTGTCTGAGTCAGGCATTTCATGGT +
Preference number: 5 (lower is better)
Translates to: AVCGDPGGRCAERPV*THTQPHCLSQAFHG
Trigger: ACCATGAAATGCCTGACTCAGACAGTGAGGCTGTGTATGAGTTCACACAGGACGCTCAGCACAGCGACCTCCGGGATCCCCACAGACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 90 bp CATTGCGGCACATGTAGCTGTCATTGGGCAGAGAGTGTGTCCGGCTaGCACCAGACTTCCTCACAGTCAGCAGGTCTGGTCCTAGGGGGA +
Preference number: 5 (lower is better)
Translates to: HCGTCSCHWAESVSG*HQTSSQSAGLVLGG
Trigger: TCCCCCTAGGACCAGACCTGCTGACTGTGAGGAAGTCTGGTGTCAGCCGGACACACTCTCTGCCCAATGACAGCTACATGTGCCGCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCAGAGCAGCAGGACATaGCCCAGCATAGGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAQSSRT*PSIGKV
Trigger: TACCTTGCCTATGCTGGGCAATGTCCTGCTGCTCTG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGCCAGGGTGCTAGCATaGGACAGGAATCGTACACGC +
Preference number: 5 (lower is better)
Translates to: ACHPSATEEGMRGASWLLARVLA*DRNRTR
Trigger: GCGTGTACGATTCCTGTCCAATGCTAGCACCCTGGC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAGCCAGGGTGCTAGCATaGGACAGGAATCGTACACGC +
Preference number: 5 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAARVLA*DRNRTR
Trigger: GCGTGTACGATTCCTGTCCAATGCTAGCACCCTGGC...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACAGCCTGCGGGCTGCTTaGCGGAGGATGTACACCAGG +
Preference number: 5 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHSLRAA*RRMYTR
Trigger: CCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGCT...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACAGCCAGCGGGACCCATaGGCATCCCTGTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHSQRDP*ASLSWI
Trigger: GATCCAGGACAGGGATGCCAATGGGTCCCGCTGGCT...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGCTCCACTGTCTGCCTaGGAGCAAGGGCTGGAGATT +
Preference number: 5 (lower is better)
Translates to: ACHPSATEEGMRGASWLLAPLSA*EQGLEI
Trigger: AATCTCCAGCCCTTGCTCCAAGGCAGACAGTGGAGC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCCCCCGGCCAAAGTATTaGCTATCTACGATCTTCCGG +
Preference number: 5 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCPRPKY*LSTIFR
Trigger: CCGGAAGATCGTAGATAGCAAATACTTTGGCCGGGG...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCCCCATGCTGAGGGTATaGACCAGGATAGCGATCATG +
Preference number: 5 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCPMLRV*TRIAIM
Trigger: CATGATCGCTATCCTGGTCAATACCCTCAGCATGGG...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGGCTCTGACTCAGACTaGGTGGCATCTCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHGSDSD*VASPSA
Trigger: GGCAGAGGGAGATGCCACCAAGTCTGAGTCAGAGCC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CAA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGGCTCTGACTCAGACTaGGTGGCATCTCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: HSRPPACALQEEGIELDWGSDSD*VASPSA
Trigger: GGCAGAGGGAGATGCCACCAAGTCTGAGTCAGAGCC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000021234.15
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CAA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCGCCCTGAAGCCGACTaGCCATTACAGTCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: LKMGRRWVVIHSRPPACARPEAD*PLQSWC
Trigger: ACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGCG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGTCCTCCTTGGCCTCTTaGTTGCTCTCTTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: HGTFQKDCPGGGARICTQSSLAS*LLSSRC
Trigger: GCACCTGGAAGAGAGCAACAAAGAGGCCAAGGAGGA...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGGGCTGTCAGGGCTATaGACACCTTCCACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVGLSGL*TPSTPG
Trigger: GCCTGGGGTGGAAGGTGTCAATAGCCCTGACAGCCC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTATGTGCTTGGAGACTTaGCTCTGGCTGCCGGAGCGC +
Preference number: 5 (lower is better)
Translates to: LSGSPACHPSATEEGMRGMCLET*LWLPER
Trigger: GCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACAT...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 90 bp CGGAAGAGGGTCAGAAAGGCCATACCAAAGTTCCTAAAGGTGGCATaGCGGCCCAAGCCCTCACAAGGGTGTGTCTCATCACACTCCAGG +
Preference number: 5 (lower is better)
Translates to: RKRVRKAIPKFLKVA*RPKPSQGCVSSHSR
Trigger: CCTGGAGTGTGATGAGACACACCCTTGTGAGGGCTTGGGCCGGCATGCCACCTTTAGGAACTTTGGTATGGCCTTTCTGACCCTCTTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp CCACCAGGGCCAAGCGCTTCTTCCTGTCCCCATCACCATCCACACTaGGCGAAAAGAAATCAGGCTCTGACTCAGACTTGGTGGCATCTC +
Preference number: 5 (lower is better)
Translates to: PPGPSASSCPHHHPH*AKRNQALTQTWWHL
Trigger: GAGATGCCACCAAGTCTGAGTCAGAGCCTGATTTCTTTTCGCCCAGTGTGGATGGTGATGGGGACAGGAAGAAGCGCTTGGCCCTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGCCCCAGACAGGTCGTaGAGCTGCGTGAAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLAPDRS*SCVKLR
Trigger: CCGGAGCTTCACGCAGCTCAACGACCTGTCTGGGGC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCGCCCCAGACAGGTCGTaGAGCTGCGTGAAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESAPDRS*SCVKLR
Trigger: CCGGAGCTTCACGCAGCTCAACGACCTGTCTGGGGC...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCAGAGCAGCAGGACATaGCCCAGCATAGGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: ACHPSATEEGMRGASWLLQSSRT*PSIGKV
Trigger: TACCTTGCCTATGCTGGGCAATGTCCTGCTGCTCTG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCAGCTGACTCTCCCGTaGCTTGGTCTCAGAGAACTG +
Preference number: 5 (lower is better)
Translates to: ACHPSATEEGMRGASWLLQLTLP*LGLREL
Trigger: CAGTTCTCTGAGACCAAGCAACGGGAGAGTCAGCTG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGGCCAGGGTGCTAGCATaGGACAGGAATCGTACACGC +
Preference number: 5 (lower is better)
Translates to: HSRPPACALQEEGIELDWARVLA*DRNRTR
Trigger: GCGTGTACGATTCCTGTCCAATGCTAGCACCCTGGC...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGCCTGCGGGCTGCTTaGCGGAGGATGTACACCAGG +
Preference number: 5 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDSLRAA*RRMYTR
Trigger: CCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGCT...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCAAGGGCTGGAGATTTaGCAGGAGCTATGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: ACHPSATEEGMRGASWLLQGLEI*QELWQA
Trigger: AGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTTG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGCTCCACTGTCTGCCTaGGAGCAAGGGCTGGAGATT +
Preference number: 5 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLAPLSA*EQGLEI
Trigger: AATCTCCAGCCCTTGCTCCAAGGCAGACAGTGGAGC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGCTCCACTGTCTGCCTaGGAGCAAGGGCTGGAGATT +
Preference number: 5 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHAPLSA*EQGLEI
Trigger: AATCTCCAGCCCTTGCTCCAAGGCAGACAGTGGAGC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCCCCGGCCAAAGTATTaGCTATCTACGATCTTCCGG +
Preference number: 5 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAPRPKY*LSTIFR
Trigger: CCGGAAGATCGTAGATAGCAAATACTTTGGCCGGGG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCCCATGCTGAGGGTATaGACCAGGATAGCGATCATG +
Preference number: 5 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAPMLRV*TRIAIM
Trigger: CATGATCGCTATCCTGGTCAATACCCTCAGCATGGG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCTGGTGAAGACGATGTaGCTGATTTCCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: LKMGRRWVVIHSRPPACALVKTM*LISRAL
Trigger: CAACGCCCTGGAAATCAGCAACATCGTCTTCACCAG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGCTGGTGAAGACGATGTaGCTGATTTCCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: HGTFQKDCPGGGARICTQLVKTM*LISRAL
Trigger: CAACGCCCTGGAAATCAGCAACATCGTCTTCACCAG...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCTGTGCTGGAGCTCTaGGGCAGTGACATCGGTGTA +
Preference number: 5 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAPVLEL*GSDIGV
Trigger: TACACCGATGTCACTGCCCAAGAGCTCCAGCACAGG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCCTGTGCTGGAGCTCTaGGGCAGTGACATCGGTGTA +
Preference number: 5 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHPVLEL*GSDIGV
Trigger: TACACCGATGTCACTGCCCAAGAGCTCCAGCACAGG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTACCTGTGCTGGAGCTCTaGGGCAGTGACATCGGTGTA +
Preference number: 5 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLPVLEL*GSDIGV
Trigger: TACACCGATGTCACTGCCCAAGAGCTCCAGCACAGG...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTACTGTGGGGGTCAATTTaGGGGCGCTCCATAGCGATG +
Preference number: 5 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLLWGSI*GRSIAM
Trigger: CATCGCTATGGAGCGCCCCAAAATTGACCCCCACAG...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCTGTGGGGGTCAATTTaGGGGCGCTCCATAGCGATG +
Preference number: 5 (lower is better)
Translates to: LSGSPACHPSATEEGMRGLWGSI*GRSIAM
Trigger: CATCGCTATGGAGCGCCCCAAAATTGACCCCCACAG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGCTGTGGGGGTCAATTTaGGGGCGCTCCATAGCGATG +
Preference number: 5 (lower is better)
Translates to: RWVVIHSRPPACALQEEGLWGSI*GRSIAM
Trigger: CATCGCTATGGAGCGCCCCAAAATTGACCCCCACAG...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCTGTGGGGGTCAATTTaGGGGCGCTCCATAGCGATG +
Preference number: 5 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHLWGSI*GRSIAM
Trigger: CATCGCTATGGAGCGCCCCAAAATTGACCCCCACAG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTAGCATGCCGAGAATCTaGGTGCCGCTGTCAGAGACC +
Preference number: 5 (lower is better)
Translates to: LSGSPACHPSATEEGMRGSMPRI*VPLSET
Trigger: GGTCTCTGACAGCGGCACCAAGATTCTCGGCATGCT...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTCAACCCAGCCATCCTaGGAGGCCAGCACAAACAGG +
Preference number: 5 (lower is better)
Translates to: HSRPPACALQEEGIELDWSTQPS*EASTNR
Trigger: CCTGTTTGTGCTGGCCTCCAAGGATGGCTGGGTTGA...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTTCAACCCAGCCATCCTaGGAGGCCAGCACAAACAGG +
Preference number: 5 (lower is better)
Translates to: LSGSPACHPSATEEGMRGSTQPS*EASTNR
Trigger: CCTGTTTGTGCTGGCCTCCAAGGATGGCTGGGTTGA...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGGGCTGTCAGGGCTATaGACACCTTCCACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: SRPPACALQEEGIELDWLGLSGL*TPSTPG
Trigger: GCCTGGGGTGGAAGGTGTCAATAGCCCTGACAGCCC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATGGGCTGTCAGGGCTATaGACACCTTCCACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDGLSGL*TPSTPG
Trigger: GCCTGGGGTGGAAGGTGTCAATAGCCCTGACAGCCC...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGCTGGTGTCTGCTGGTaGGGAGTGAACAGACAAGAT +
Preference number: 5 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAAGVCW*GVNRQD
Trigger: ATCTTGTCTGTTCACTCCCAACCAGCAGACACCAGC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGGCTGGTGTCTGCTGGTaGGGAGTGAACAGACAAGAT +
Preference number: 5 (lower is better)
Translates to: HGTFQKDCPGGGARICTQAGVCW*GVNRQD
Trigger: ATCTTGTCTGTTCACTCCCAACCAGCAGACACCAGC...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACATGTGCTTGGAGACTTaGCTCTGGCTGCCGGAGCGC +
Preference number: 5 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHMCLET*LWLPER
Trigger: GCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACAT...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACGCTGCTTCTGGTCTCTaGAGGGTCCTTGGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHAASGL*RVLGPA
Trigger: AGCTGGGCCAAGGACCCTCAAGAGACCAGAAGCAGC...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 90 bp GGTGGACGAGGAGCCGGAAGCGCGAGTAGTCAGAGTAGTAGGGTTTaGACTGGGCTTCGGCCATCTGCTTCTCCTTACTCCTTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: GGRGAGSASSQSSRV*TGLRPSASPYSFSF
Trigger: AAAAGAGAAGGAGTAAGGAGAAGCAGATGGCCGAAGCCCAGTGCAAACCCTACTACTCTGACTACTCGCGCTTCCGGCTCCTCGTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107785.2
ENSMUST00000107791.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCAGAGCAGCAGGACATaGCCCAGCATAGGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAQSSRT*PSIGKV
Trigger: TACCTTGCCTATGCTGGGCAATGTCCTGCTGCTCTG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTACAGAGCAGCAGGACATaGCCCAGCATAGGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLQSSRT*PSIGKV
Trigger: TACCTTGCCTATGCTGGGCAATGTCCTGCTGCTCTG...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGCAGAGCAGCAGGACATaGCCCAGCATAGGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: RWVVIHSRPPACALQEEGQSSRT*PSIGKV
Trigger: TACCTTGCCTATGCTGGGCAATGTCCTGCTGCTCTG...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACAAGTTGATGGCGCCTTaGAAGGGGTTGTGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHKLMAP*KGLCSP
Trigger: AGGCGAGCACAACCCCTTCAAAGGCGCCATCAACTT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGAAGTTGATGGCGCCTTaGAAGGGGTTGTGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: RWVVIHSRPPACALQEEGKLMAP*KGLCSP
Trigger: AGGCGAGCACAACCCCTTCAAAGGCGCCATCAACTT...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCAGCTGACTCTCCCGTaGCTTGGTCTCAGAGAACTG +
Preference number: 5 (lower is better)
Translates to: LSGSPACHPSATEEGMRGQLTLP*LGLREL
Trigger: CAGTTCTCTGAGACCAAGCAACGGGAGAGTCAGCTG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCAGCTGACTCTCCCGTaGCTTGGTCTCAGAGAACTG +
Preference number: 5 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAQLTLP*LGLREL
Trigger: CAGTTCTCTGAGACCAAGCAACGGGAGAGTCAGCTG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTGCCAGGGTGCTAGCATaGGACAGGAATCGTACACGC +
Preference number: 5 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVARVLA*DRNRTR
Trigger: GCGTGTACGATTCCTGTCCAATGCTAGCACCCTGGC...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCAGCCTGCGGGCTGCTTaGCGGAGGATGTACACCAGG +
Preference number: 5 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESSLRAA*RRMYTR
Trigger: CCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGCT...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCAGCCAGCGGGACCCATaGGCATCCCTGTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESSQRDP*ASLSWI
Trigger: GATCCAGGACAGGGATGCCAATGGGTCCCGCTGGCT...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTAGCCAGCGGGACCCATaGGCATCCCTGTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: RPPACALQEEGIELDWLFSQRDP*ASLSWI
Trigger: GATCCAGGACAGGGATGCCAATGGGTCCCGCTGGCT...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCAAGGGCTGGAGATTTaGCAGGAGCTATGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAQGLEI*QELWQA
Trigger: AGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTTG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACCAAGGGCTGGAGATTTaGCAGGAGCTATGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHQGLEI*QELWQA
Trigger: AGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTTG...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTCCCATGCTGAGGGTATaGACCAGGATAGCGATCATG +
Preference number: 5 (lower is better)
Translates to: ACHPSATEEGMRGASWLLPMLRV*TRIAIM
Trigger: CATGATCGCTATCCTGGTCAATACCCTCAGCATGGG...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACCCATGCTGAGGGTATaGACCAGGATAGCGATCATG +
Preference number: 5 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAPMLRV*TRIAIM
Trigger: CATGATCGCTATCCTGGTCAATACCCTCAGCATGGG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACTGGTGAAGACGATGTaGCTGATTTCCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: VLLSPNSSWCREPWPHWALVKTM*LISRAL
Trigger: CAACGCCCTGGAAATCAGCAACATCGTCTTCACCAG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCCCTGTGCTGGAGCTCTaGGGCAGTGACATCGGTGTA +
Preference number: 5 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSPVLEL*GSDIGV
Trigger: TACACCGATGTCACTGCCCAAGAGCTCCAGCACAGG...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCGCCCTGAAGCCGACTaGCCATTACAGTCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: LSGSPACHPSATEEGMRGRPEAD*PLQSWC
Trigger: ACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGCG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTACGCCCTGAAGCCGACTaGCCATTACAGTCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLRPEAD*PLQSWC
Trigger: ACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGCG...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTACAGGAGACGAAACCTaGACTGGGGAGGGAAGATAT +
Preference number: 5 (lower is better)
Translates to: LKMGRRWVVIHSRPPACATGDET*TGEGRY
Trigger: ATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTGT...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCCTGTGGGGGTCAATTTaGGGGCGCTCCATAGCGATG +
Preference number: 5 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSLWGSI*GRSIAM
Trigger: CATCGCTATGGAGCGCCCCAAAATTGACCCCCACAG...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTCTGTGGGGGTCAATTTaGGGGCGCTCCATAGCGATG +
Preference number: 5 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVLWGSI*GRSIAM
Trigger: CATCGCTATGGAGCGCCCCAAAATTGACCCCCACAG...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGCATGCCGAGAATCTaGGTGCCGCTGTCAGAGACC +
Preference number: 5 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVSMPRI*VPLSET
Trigger: GGTCTCTGACAGCGGCACCAAGATTCTCGGCATGCT...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTTCAACCCAGCCATCCTaGGAGGCCAGCACAAACAGG +
Preference number: 5 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVSTQPS*EASTNR
Trigger: CCTGTTTGTGCTGGCCTCCAAGGATGGCTGGGTTGA...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCTCAACCCAGCCATCCTaGGAGGCCAGCACAAACAGG +
Preference number: 5 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSSTQPS*EASTNR
Trigger: CCTGTTTGTGCTGGCCTCCAAGGATGGCTGGGTTGA...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CATGGGACTTTTCAGAAGGACTGCCCAGGAGGCGGAGCTAGGATCTGCACCCAGATGGGCAGTGAAGCATaGACCTCAATCTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: HGTFQKDCPGGGARICTQMGSEA*TSISSS
Trigger: GCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCAT...CTGGGTGCAGATCCTAGCTCCGCCTCCTGGGCAGTCCTTCTGAAAAGTCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACTCCTCCTTGGCCTCTTaGTTGCTCTCTTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHSSLAS*LLSSRC
Trigger: GCACCTGGAAGAGAGCAACAAAGAGGCCAAGGAGGA...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAATGTGCTTGGAGACTTaGCTCTGGCTGCCGGAGCGC +
Preference number: 5 (lower is better)
Translates to: SRPPACALQEEGIELDWLMCLET*LWLPER
Trigger: GCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACAT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATATGTGCTTGGAGACTTaGCTCTGGCTGCCGGAGCGC +
Preference number: 5 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDMCLET*LWLPER
Trigger: GCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACAT...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGCTGCTTCTGGTCTCTaGAGGGTCCTTGGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: SRPPACALQEEGIELDWLAASGL*RVLGPA
Trigger: AGCTGGGCCAAGGACCCTCAAGAGACCAGAAGCAGC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 90 bp CATCCACACTGGGCGAAAAGAAATCAGGCTCTGACTCAGACTTGGTaGCATCTCCCTCTGCCTGGAAACCCTCCACGAGAATGGCGACAA +
Preference number: 5 (lower is better)
Translates to: HPHWAKRNQALTQTW*HLPLPGNPPREWRQ
Trigger: TTGTCGCCATTCTCGTGGAGGGTTTCCAGGCAGAGGGAGATGCCACCAAGTCTGAGTCAGAGCCTGATTTCTTTTCGCCCAGTGTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CAA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACCAGAGCAGCAGGACATaGCCCAGCATAGGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHQSSRT*PSIGKV
Trigger: TACCTTGCCTATGCTGGGCAATGTCCTGCTGCTCTG...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTCAGAGCAGCAGGACATaGCCCAGCATAGGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVQSSRT*PSIGKV
Trigger: TACCTTGCCTATGCTGGGCAATGTCCTGCTGCTCTG...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCGCAGTTGGTATAGTATaGGTTCCAGTTGACACAGGT +
Preference number: 5 (lower is better)
Translates to: VEDGPPLGCNTLTAPGLCAVGIV*VPVDTG
Trigger: ACCTGTGTCAACTGGAACCAATACTATACCAACTGC...GCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCCAGGGCTGTGTTCTCTTCAGACTGACTCTCAGGAAGTCCTGCTTGTCATCCAAGTTGATGGCGCCTTaGAAGGGGTTGTGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: LQGCVLFRLTLRKSCLSSKLMAP*KGLCSP
Trigger: AGGCGAGCACAACCCCTTCAAAGGCGCCATCAACTT...GGATGACAAGCAGGACTTCCTGAGAGTCAGTCTGAAGAGAACACAGCCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATGCCAGGGTGCTAGCATaGGACAGGAATCGTACACGC +
Preference number: 5 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDARVLA*DRNRTR
Trigger: GCGTGTACGATTCCTGTCCAATGCTAGCACCCTGGC...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCGCCAGGGTGCTAGCATaGGACAGGAATCGTACACGC +
Preference number: 5 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAARVLA*DRNRTR
Trigger: GCGTGTACGATTCCTGTCCAATGCTAGCACCCTGGC...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACCAAGGGCTGGAGATTTaGCAGGAGCTATGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHQGLEI*QELWQA
Trigger: AGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTTG...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTACCCATGCTGAGGGTATaGACCAGGATAGCGATCATG +
Preference number: 5 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLPMLRV*TRIAIM
Trigger: CATGATCGCTATCCTGGTCAATACCCTCAGCATGGG...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGCTGGTGAAGACGATGTaGCTGATTTCCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: RWVVIHSRPPACALQEEGLVKTM*LISRAL
Trigger: CAACGCCCTGGAAATCAGCAACATCGTCTTCACCAG...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCTGGTGAAGACGATGTaGCTGATTTCCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: LSGSPACHPSATEEGMRGLVKTM*LISRAL
Trigger: CAACGCCCTGGAAATCAGCAACATCGTCTTCACCAG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCTGGTGAAGACGATGTaGCTGATTTCCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTALVKTM*LISRAL
Trigger: CAACGCCCTGGAAATCAGCAACATCGTCTTCACCAG...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGGCTCTGACTCAGACTaGGTGGCATCTCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: RPPACALQEEGIELDWLFGSDSD*VASPSA
Trigger: GGCAGAGGGAGATGCCACCAAGTCTGAGTCAGAGCC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CAA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGGTCAAAGGAACTCTaGGCCTCACGTTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: ACHPSATEEGMRGASWLLRSKEL*ASRSKE
Trigger: TTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACCT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTCGCCCTGAAGCCGACTaGCCATTACAGTCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVRPEAD*PLQSWC
Trigger: ACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGCG...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTACAGGAGACGAAACCTaGACTGGGGAGGGAAGATAT +
Preference number: 5 (lower is better)
Translates to: ACHPSATEEGMRGASWLLTGDET*TGEGRY
Trigger: ATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTGT...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCTGTGGGGGTCAATTTaGGGGCGCTCCATAGCGATG +
Preference number: 5 (lower is better)
Translates to: EILHKRIAFSQQLLVSRALWGSI*GRSIAM
Trigger: CATCGCTATGGAGCGCCCCAAAATTGACCCCCACAG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCAGCATGCCGAGAATCTaGGTGCCGCTGTCAGAGACC +
Preference number: 5 (lower is better)
Translates to: EILHKRIAFSQQLLVSRASMPRI*VPLSET
Trigger: GGTCTCTGACAGCGGCACCAAGATTCTCGGCATGCT...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGCATGCCGAGAATCTaGGTGCCGCTGTCAGAGACC +
Preference number: 5 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDSMPRI*VPLSET
Trigger: GGTCTCTGACAGCGGCACCAAGATTCTCGGCATGCT...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTCCGAAGGCCACAAGTTaGAATACTGACTCCAAGACA +
Preference number: 5 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAPKATS*NTDSKT
Trigger: TGTCTTGGAGTCAGTATTCAAACTTGTGGCCTTCGG...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCAATGGGCAGTGAAGCATaGACCTCAATCTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAMGSEA*TSISSS
Trigger: GCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCAT...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTTCCTCCTTGGCCTCTTaGTTGCTCTCTTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVSSLAS*LLSSRC
Trigger: GCACCTGGAAGAGAGCAACAAAGAGGCCAAGGAGGA...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTAGCTGGTGTCTGCTGGTaGGGAGTGAACAGACAAGAT +
Preference number: 5 (lower is better)
Translates to: LVIPQPLKKACEVPRGYLAGVCW*GVNRQD
Trigger: ATCTTGTCTGTTCACTCCCAACCAGCAGACACCAGC...TAAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGCTGGTGTCTGCTGGTaGGGAGTGAACAGACAAGAT +
Preference number: 5 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHAGVCW*GVNRQD
Trigger: ATCTTGTCTGTTCACTCCCAACCAGCAGACACCAGC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCGCTGGTGTCTGCTGGTaGGGAGTGAACAGACAAGAT +
Preference number: 5 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTAAGVCW*GVNRQD
Trigger: ATCTTGTCTGTTCACTCCCAACCAGCAGACACCAGC...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGCTGGTGTCTGCTGGTaGGGAGTGAACAGACAAGAT +
Preference number: 5 (lower is better)
Translates to: RWVVIHSRPPACALQEEGAGVCW*GVNRQD
Trigger: ATCTTGTCTGTTCACTCCCAACCAGCAGACACCAGC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGCAGCTGACTCTCCCGTaGCTTGGTCTCAGAGAAGAT +
Preference number: 5 (lower is better)
Translates to: HSRPPACALQEEGIELDWQLTLP*LGLRED
Trigger: ATCTTCTCTGAGACCAAGCAACGGGAGAGTCAGCTG...CCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107786.8
CDS-3UTR CAA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCAGAGCAGCAGGACATaGCCCAGCATAGGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAQSSRT*PSIGKV
Trigger: TACCTTGCCTATGCTGGGCAATGTCCTGCTGCTCTG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTGCAGTTGGTATAGTATaGGTTCCAGTTGACACAGGT +
Preference number: 5 (lower is better)
Translates to: LKMGRRWVVIHSRPPACAAVGIV*VPVDTG
Trigger: ACCTGTGTCAACTGGAACCAATACTATACCAACTGC...AGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCAGCTGACTCTCCCGTaGCTTGGTCTCAGAGAACTG +
Preference number: 5 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDQLTLP*LGLREL
Trigger: CAGTTCTCTGAGACCAAGCAACGGGAGAGTCAGCTG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCGCCAGGGTGCTAGCATaGGACAGGAATCGTACACGC +
Preference number: 5 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLARVLA*DRNRTR
Trigger: GCGTGTACGATTCCTGTCCAATGCTAGCACCCTGGC...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGCCAGCGGGACCCATaGGCATCCCTGTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSSQRDP*ASLSWI
Trigger: GATCCAGGACAGGGATGCCAATGGGTCCCGCTGGCT...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCAAGGGCTGGAGATTTaGCAGGAGCTATGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAQGLEI*QELWQA
Trigger: AGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTTG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACCCCCGGCCAAAGTATTaGCTATCTACGATCTTCCGG +
Preference number: 5 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHPRPKY*LSTIFR
Trigger: CCGGAAGATCGTAGATAGCAAATACTTTGGCCGGGG...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACCTGGTGAAGACGATGTaGCTGATTTCCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHLVKTM*LISRAL
Trigger: CAACGCCCTGGAAATCAGCAACATCGTCTTCACCAG...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCCTGTGCTGGAGCTCTaGGGCAGTGACATCGGTGTA +
Preference number: 5 (lower is better)
Translates to: RPPACALQEEGIELDWLFPVLEL*GSDIGV
Trigger: TACACCGATGTCACTGCCCAAGAGCTCCAGCACAGG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGAGGTCAAAGGAACTCTaGGCCTCACGTTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: RWVVIHSRPPACALQEEGRSKEL*ASRSKE
Trigger: TTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACCT...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCACGGCCAGGTCAAAGGAACTCTaGGCCTCACGTTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: FSLSVEDGPPLGCNTLTARSKEL*ASRSKE
Trigger: TTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACCT...GGCCGTGAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACGCCCTGAAGCCGACTaGCCATTACAGTCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: SRPPACALQEEGIELDWLRPEAD*PLQSWC
Trigger: ACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGCG...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACAGGAGACGAAACCTaGACTGGGGAGGGAAGATAT +
Preference number: 5 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHTGDET*TGEGRY
Trigger: ATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTGT...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCTCAACCCAGCCATCCTaGGAGGCCAGCACAAACAGG +
Preference number: 5 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESSTQPS*EASTNR
Trigger: CCTGTTTGTGCTGGCCTCCAAGGATGGCTGGGTTGA...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACTGGGCACCGAAGGCCACAAGTTaGAATACTGACTCCAAGACA +
Preference number: 5 (lower is better)
Translates to: VLLSPNSSWCREPWPHWAPKATS*NTDSKT
Trigger: TGTCTTGGAGTCAGTATTCAAACTTGTGGCCTTCGG...TGCCCAGTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTATGGGCAGTGAAGCATaGACCTCAATCTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: LSGSPACHPSATEEGMRGMGSEA*TSISSS
Trigger: GCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCAT...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTGCCTCGTGGCTACTTGCAGTTGGTATAGTATaGGTTCCAGTTGACACAGGT +
Preference number: 5 (lower is better)
Translates to: ACHPSATEEGMRGASWLLAVGIV*VPVDTG
Trigger: ACCTGTGTCAACTGGAACCAATACTATACCAACTGC...AAGTAGCCACGAGGCACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCAAGTTGATGGCGCCTTaGAAGGGGTTGTGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLKLMAP*KGLCSP
Trigger: AGGCGAGCACAACCCCTTCAAAGGCGCCATCAACTT...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTAAGTTGATGGCGCCTTaGAAGGGGTTGTGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: RPPACALQEEGIELDWLFKLMAP*KGLCSP
Trigger: AGGCGAGCACAACCCCTTCAAAGGCGCCATCAACTT...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCAAGGGCTGGAGATTTaGCAGGAGCTATGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESQGLEI*QELWQA
Trigger: AGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTTG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCCCCGGCCAAAGTATTaGCTATCTACGATCTTCCGG +
Preference number: 5 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAPRPKY*LSTIFR
Trigger: CCGGAAGATCGTAGATAGCAAATACTTTGGCCGGGG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACCCCGGCCAAAGTATTaGCTATCTACGATCTTCCGG +
Preference number: 5 (lower is better)
Translates to: SRPPACALQEEGIELDWLPRPKY*LSTIFR
Trigger: CCGGAAGATCGTAGATAGCAAATACTTTGGCCGGGG...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATCCCATGCTGAGGGTATaGACCAGGATAGCGATCATG +
Preference number: 5 (lower is better)
Translates to: LGCNTLTAPGLCFTRRGDPMLRV*TRIAIM
Trigger: CATGATCGCTATCCTGGTCAATACCCTCAGCATGGG...ATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCTGGTGAAGACGATGTaGCTGATTTCCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: EILHKRIAFSQQLLVSRALVKTM*LISRAL
Trigger: CAACGCCCTGGAAATCAGCAACATCGTCTTCACCAG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCTCAGGAAGTCCTGCTTGTCATCCCTCAGCCACTGAAGAAGGCATGCGAGGTCCGAAGGCCACAAGTTaGAATACTGACTCCAAGACA +
Preference number: 5 (lower is better)
Translates to: LSGSPACHPSATEEGMRGPKATS*NTDSKT
Trigger: TGTCTTGGAGTCAGTATTCAAACTTGTGGCCTTCGG...ACCTCGCATGCCTTCTTCAGTGGCTGAGGGATGACAAGCAGGACTTCCTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp ACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACACATGGGCAGTGAAGCATaGACCTCAATCTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: TNVLLSPNSSWCREPWPHMGSEA*TSISSS
Trigger: GCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCAT...GTGTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATGGGCAGTGAAGCATaGACCTCAATCTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: LTAPGLCFTRRGDRTRLVMGSEA*TSISSS
Trigger: GCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCAT...AACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTTCCTCCTTGGCCTCTTaGTTGCTCTCTTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: RPPACALQEEGIELDWLFSSLAS*LLSSRC
Trigger: GCACCTGGAAGAGAGCAACAAAGAGGCCAAGGAGGA...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGCTGCTTCTGGTCTCTaGAGGGTCCTTGGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSAASGL*RVLGPA
Trigger: AGCTGGGCCAAGGACCCTCAAGAGACCAGAAGCAGC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGGCCACGCAGTTGGTATAGTATaGGTTCCAGTTGACACAGGT +
Preference number: 5 (lower is better)
Translates to: AQTYCFLPTAPGVESLGHAVGIV*VPVDTG
Trigger: ACCTGTGTCAACTGGAACCAATACTATACCAACTGC...GTGGCCAAGGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGTTGGGTTGTAATACACTCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGGCAGTTGGTATAGTATaGGTTCCAGTTGACACAGGT +
Preference number: 5 (lower is better)
Translates to: RWVVIHSRPPACALQEEGAVGIV*VPVDTG
Trigger: ACCTGTGTCAACTGGAACCAATACTATACCAACTGC...CCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGAGTGTATTACAACCCAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCCCCCGGCCAAAGTATTaGCTATCTACGATCTTCCGG +
Preference number: 5 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLPRPKY*LSTIFR
Trigger: CCGGAAGATCGTAGATAGCAAATACTTTGGCCGGGG...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCCATGCTGAGGGTATaGACCAGGATAGCGATCATG +
Preference number: 5 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESPMLRV*TRIAIM
Trigger: CATGATCGCTATCCTGGTCAATACCCTCAGCATGGG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAAGGTCAAAGGAACTCTaGGCCTCACGTTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: SRPPACALQEEGIELDWLRSKEL*ASRSKE
Trigger: TTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACCT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCTTGCCATTACAGTCTaGGTGTTCAGAGGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: EILHKRIAFSQQLLVSRALAITV*VFRGRA
Trigger: AGCTCTGCCTCTGAACACCAAGACTGTAATGGCAAG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAACAGGAGACGAAACCTaGACTGGGGAGGGAAGATAT +
Preference number: 5 (lower is better)
Translates to: SRPPACALQEEGIELDWLTGDET*TGEGRY
Trigger: ATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTGT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCATGGGCAGTGAAGCATaGACCTCAATCTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAMGSEA*TSISSS
Trigger: GCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCAT...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAATGGGCAGTGAAGCATaGACCTCAATCTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SRPPACALQEEGIELDWLMGSEA*TSISSS
Trigger: GCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCAT...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTGCTGGTGTCTGCTGGTaGGGAGTGAACAGACAAGAT +
Preference number: 5 (lower is better)
Translates to: RPPACALQEEGIELDWLFAGVCW*GVNRQD
Trigger: ATCTTGTCTGTTCACTCCCAACCAGCAGACACCAGC...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGCCCCAGACAGGTCGTaGAGCTGCGTGAAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIAPDRS*SCVKLR
Trigger: CCGGAGCTTCACGCAGCTCAACGACCTGTCTGGGGC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGCCCCAGACAGGTCGTaGAGCTGCGTGAAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYAPDRS*SCVKLR
Trigger: CCGGAGCTTCACGCAGCTCAACGACCTGTCTGGGGC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAAGCCTGCGGGCTGCTTaGCGGAGGATGTACACCAGG +
Preference number: 5 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRSLRAA*RRMYTR
Trigger: CCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGCT...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCAAGGGCTGGAGATTTaGCAGGAGCTATGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSQGLEI*QELWQA
Trigger: AGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTTG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTAGGTCAAAGGAACTCTaGGCCTCACGTTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: RPPACALQEEGIELDWLFRSKEL*ASRSKE
Trigger: TTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACCT...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCTTGCCATTACAGTCTaGGTGTTCAGAGGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESLAITV*VFRGRA
Trigger: AGCTCTGCCTCTGAACACCAAGACTGTAATGGCAAG...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTCTTGCCATTACAGTCTaGGTGTTCAGAGGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RPPACALQEEGIELDWLFLAITV*VFRGRA
Trigger: AGCTCTGCCTCTGAACACCAAGACTGTAATGGCAAG...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCGCCCTGAAGCCGACTaGCCATTACAGTCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSRPEAD*PLQSWC
Trigger: ACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGCG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTATTTACAGGAGACGAAACCTaGACTGGGGAGGGAAGATAT +
Preference number: 5 (lower is better)
Translates to: RPPACALQEEGIELDWLFTGDET*TGEGRY
Trigger: ATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTGT...AAATAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCACAGGAGACGAAACCTaGACTGGGGAGGGAAGATAT +
Preference number: 5 (lower is better)
Translates to: RDSAQTYCFLPTAPGVESTGDET*TGEGRY
Trigger: ATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTGT...GCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTACCGAAGGCCACAAGTTaGAATACTGACTCCAAGACA +
Preference number: 5 (lower is better)
Translates to: SRPPACALQEEGIELDWLPKATS*NTDSKT
Trigger: TGTCTTGGAGTCAGTATTCAAACTTGTGGCCTTCGG...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGAGCCCCGAAGGCCACAAGTTaGAATACTGACTCCAAGACA +
Preference number: 5 (lower is better)
Translates to: EILHKRIAFSQQLLVSRAPKATS*NTDSKT
Trigger: TGTCTTGGAGTCAGTATTCAAACTTGTGGCCTTCGG...GGCTCTCGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCATGGGCAGTGAAGCATaGACCTCAATCTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLMGSEA*TSISSS
Trigger: GCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCAT...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGGGCTGTCAGGGCTATaGACACCTTCCACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRGLSGL*TPSTPG
Trigger: GCCTGGGGTGGAAGGTGTCAATAGCCCTGACAGCCC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGGGCTGTCAGGGCTATaGACACCTTCCACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRGLSGL*TPSTPG
Trigger: GCCTGGGGTGGAAGGTGTCAATAGCCCTGACAGCCC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 90 bp GGTTGTGCTCGCCTGCAGAGCAGTTGGTATAGTATTGGTTCCAGTTaGCACAGGTGGTATTGCTGGAACTGTTATAGGCCTCATAGTCCA +
Preference number: 5 (lower is better)
Translates to: GCARLQSSWYSIGSS*HRWYCWNCYRPHSP
Trigger: TGGACTATGAGGCCTATAACAGTTCCAGCAATACCACCTGTGTCAACTGGAACCAATACTATACCAACTGCTCTGCAGGCGAGCACAACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TCACGGCCCCCGGCTTGTGCTTTACAAGAAGAGGGGATAGAACTAGACTGGTTAGCAGTTGGTATAGTATaGGTTCCAGTTGACACAGGT +
Preference number: 5 (lower is better)
Translates to: SRPPACALQEEGIELDWLAVGIV*VPVDTG
Trigger: ACCTGTGTCAACTGGAACCAATACTATACCAACTGC...TAACCAGTCTAGTTCTATCCCCTCTTCTTGTAAAGCACAAGCCGGGGGCCGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGCCCATGCTGAGGGTATaGACCAGGATAGCGATCATG +
Preference number: 5 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSPMLRV*TRIAIM
Trigger: CATGATCGCTATCCTGGTCAATACCCTCAGCATGGG...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAATGGTTCTCGCTTTCCGTTGAAGATGGGCCGCCGTTGGGTTGTAATACACTCCCGAAGGCCACAAGTTaGAATACTGACTCCAAGACA +
Preference number: 5 (lower is better)
Translates to: KWFSLSVEDGPPLGCNTLPKATS*NTDSKT
Trigger: TGTCTTGGAGTCAGTATTCAAACTTGTGGCCTTCGG...GAGTGTATTACAACCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGCTGGTGTCTGCTGGTaGGGAGTGAACAGACAAGAT +
Preference number: 5 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSAGVCW*GVNRQD
Trigger: ATCTTGTCTGTTCACTCCCAACCAGCAGACACCAGC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAATGTGCTTGGAGACTTaGCTCTGGCTGCCGGAGCGC +
Preference number: 5 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRMCLET*LWLPER
Trigger: GCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACAT...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAATGTGCTTGGAGACTTaGCTCTGGCTGCCGGAGCGC +
Preference number: 5 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRMCLET*LWLPER
Trigger: GCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACAT...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGCTGCTTCTGGTCTCTaGAGGGTCCTTGGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRAASGL*RVLGPA
Trigger: AGCTGGGCCAAGGACCCTCAAGAGACCAGAAGCAGC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGCTGCTTCTGGTCTCTaGAGGGTCCTTGGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRAASGL*RVLGPA
Trigger: AGCTGGGCCAAGGACCCTCAAGAGACCAGAAGCAGC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 90 bp GTCCTGGAAGAACCGGCGGAAGCCGAAGGCCACAAGTTTGAATACTaGCTCCAAGACAAAGATGACGGTAAAGATGTAGTTGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: VLEEPAEAEGHKFEY*LQDKDDGKDVVADL
Trigger: AAGATCTGCAACTACATCTTTACCGTCATCTTTGTCTTGGAGTCAGTATTCAAACTTGTGGCCTTCGGCTTCCGCCGGTTCTTCCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGCTCCACTGTCTGCCTaGGAGCAAGGGCTGGAGATT +
Preference number: 5 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLAPLSA*EQGLEI
Trigger: AATCTCCAGCCCTTGCTCCAAGGCAGACAGTGGAGC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAGCTCCACTGTCTGCCTaGGAGCAAGGGCTGGAGATT +
Preference number: 5 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRAPLSA*EQGLEI
Trigger: AATCTCCAGCCCTTGCTCCAAGGCAGACAGTGGAGC...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGGCTCTGACTCAGACTaGGTGGCATCTCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILGSDSD*VASPSA
Trigger: GGCAGAGGGAGATGCCACCAAGTCTGAGTCAGAGCC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS-3UTR CAA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGAGGTCAAAGGAACTCTaGGCCTCACGTTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSRSKEL*ASRSKE
Trigger: TTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACCT...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAAGCATGCCGAGAATCTaGGTGCCGCTGTCAGAGACC +
Preference number: 5 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRSMPRI*VPLSET
Trigger: GGTCTCTGACAGCGGCACCAAGATTCTCGGCATGCT...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGATCAACCCAGCCATCCTaGGAGGCCAGCACAAACAGG +
Preference number: 5 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRSTQPS*EASTNR
Trigger: CCTGTTTGTGCTGGCCTCCAAGGATGGCTGGGTTGA...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAATGTGCTTGGAGACTTaGCTCTGGCTGCCGGAGCGC +
Preference number: 5 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIMCLET*LWLPER
Trigger: GCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACAT...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGCTGCTTCTGGTCTCTaGAGGGTCCTTGGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYAASGL*RVLGPA
Trigger: AGCTGGGCCAAGGACCCTCAAGAGACCAGAAGCAGC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAGCTGCTTCTGGTCTCTaGAGGGTCCTTGGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIAASGL*RVLGPA
Trigger: AGCTGGGCCAAGGACCCTCAAGAGACCAGAAGCAGC...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCAGAGCAGCAGGACATaGCCCAGCATAGGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLQSSRT*PSIGKV
Trigger: TACCTTGCCTATGCTGGGCAATGTCCTGCTGCTCTG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAAAGTTGATGGCGCCTTaGAAGGGGTTGTGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRKLMAP*KGLCSP
Trigger: AGGCGAGCACAACCCCTTCAAAGGCGCCATCAACTT...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCAGCTGACTCTCCCGTaGCTTGGTCTCAGAGAACTG +
Preference number: 5 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLQLTLP*LGLREL
Trigger: CAGTTCTCTGAGACCAAGCAACGGGAGAGTCAGCTG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGACAGCTGACTCTCCCGTaGCTTGGTCTCAGAGAACTG +
Preference number: 5 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRQLTLP*LGLREL
Trigger: CAGTTCTCTGAGACCAAGCAACGGGAGAGTCAGCTG...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGCCAGGGTGCTAGCATaGGACAGGAATCGTACACGC +
Preference number: 5 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILARVLA*DRNRTR
Trigger: GCGTGTACGATTCCTGTCCAATGCTAGCACCCTGGC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGACAAGGGCTGGAGATTTaGCAGGAGCTATGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRQGLEI*QELWQA
Trigger: AGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTTG...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGCTCCACTGTCTGCCTaGGAGCAAGGGCTGGAGATT +
Preference number: 5 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILAPLSA*EQGLEI
Trigger: AATCTCCAGCCCTTGCTCCAAGGCAGACAGTGGAGC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGCTCCACTGTCTGCCTaGGAGCAAGGGCTGGAGATT +
Preference number: 5 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYAPLSA*EQGLEI
Trigger: AATCTCCAGCCCTTGCTCCAAGGCAGACAGTGGAGC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCCTGTGCTGGAGCTCTaGGGCAGTGACATCGGTGTA +
Preference number: 5 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYPVLEL*GSDIGV
Trigger: TACACCGATGTCACTGCCCAAGAGCTCCAGCACAGG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACCTGTGCTGGAGCTCTaGGGCAGTGACATCGGTGTA +
Preference number: 5 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILPVLEL*GSDIGV
Trigger: TACACCGATGTCACTGCCCAAGAGCTCCAGCACAGG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCGCCCTGAAGCCGACTaGCCATTACAGTCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLRPEAD*PLQSWC
Trigger: ACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGCG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACTGTGGGGGTCAATTTaGGGGCGCTCCATAGCGATG +
Preference number: 5 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILLWGSI*GRSIAM
Trigger: CATCGCTATGGAGCGCCCCAAAATTGACCCCCACAG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCTGTGGGGGTCAATTTaGGGGCGCTCCATAGCGATG +
Preference number: 5 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYLWGSI*GRSIAM
Trigger: CATCGCTATGGAGCGCCCCAAAATTGACCCCCACAG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTATCAACCCAGCCATCCTaGGAGGCCAGCACAAACAGG +
Preference number: 5 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILSTQPS*EASTNR
Trigger: CCTGTTTGTGCTGGCCTCCAAGGATGGCTGGGTTGA...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGTCCTCCTTGGCCTCTTaGTTGCTCTCTTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLSSLAS*LLSSRC
Trigger: GCACCTGGAAGAGAGCAACAAAGAGGCCAAGGAGGA...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATCCTCCTTGGCCTCTTaGTTGCTCTCTTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRSSLAS*LLSSRC
Trigger: GCACCTGGAAGAGAGCAACAAAGAGGCCAAGGAGGA...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTACAGAGCAGCAGGACATaGCCCAGCATAGGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILQSSRT*PSIGKV
Trigger: TACCTTGCCTATGCTGGGCAATGTCCTGCTGCTCTG...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp TACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGTGTCGGCAGTTGGTATAGTATaGGTTCCAGTTGACACAGGT +
Preference number: 5 (lower is better)
Translates to: YIEILHKRIAFSQQLLVSAVGIV*VPVDTG
Trigger: ACCTGTGTCAACTGGAACCAATACTATACCAACTGC...CGACACCAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAAAGTTGATGGCGCCTTaGAAGGGGTTGTGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIKLMAP*KGLCSP
Trigger: AGGCGAGCACAACCCCTTCAAAGGCGCCATCAACTT...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAAAGTTGATGGCGCCTTaGAAGGGGTTGTGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILKLMAP*KGLCSP
Trigger: AGGCGAGCACAACCCCTTCAAAGGCGCCATCAACTT...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACAGCTGACTCTCCCGTaGCTTGGTCTCAGAGAACTG +
Preference number: 5 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIQLTLP*LGLREL
Trigger: CAGTTCTCTGAGACCAAGCAACGGGAGAGTCAGCTG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGCCAGGGTGCTAGCATaGGACAGGAATCGTACACGC +
Preference number: 5 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIARVLA*DRNRTR
Trigger: GCGTGTACGATTCCTGTCCAATGCTAGCACCCTGGC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCGCTCCACTGTCTGCCTaGGAGCAAGGGCTGGAGATT +
Preference number: 5 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSAPLSA*EQGLEI
Trigger: AATCTCCAGCCCTTGCTCCAAGGCAGACAGTGGAGC...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGCTCCACTGTCTGCCTaGGAGCAAGGGCTGGAGATT +
Preference number: 5 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIAPLSA*EQGLEI
Trigger: AATCTCCAGCCCTTGCTCCAAGGCAGACAGTGGAGC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGACCCCGGCCAAAGTATTaGCTATCTACGATCTTCCGG +
Preference number: 5 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRPRPKY*LSTIFR
Trigger: CCGGAAGATCGTAGATAGCAAATACTTTGGCCGGGG...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGCTGGTGAAGACGATGTaGCTGATTTCCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLLVKTM*LISRAL
Trigger: CAACGCCCTGGAAATCAGCAACATCGTCTTCACCAG...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCCTGTGCTGGAGCTCTaGGGCAGTGACATCGGTGTA +
Preference number: 5 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSPVLEL*GSDIGV
Trigger: TACACCGATGTCACTGCCCAAGAGCTCCAGCACAGG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCCTGTGCTGGAGCTCTaGGGCAGTGACATCGGTGTA +
Preference number: 5 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIPVLEL*GSDIGV
Trigger: TACACCGATGTCACTGCCCAAGAGCTCCAGCACAGG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACGCCCTGAAGCCGACTaGCCATTACAGTCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIRPEAD*PLQSWC
Trigger: ACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGCG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTAGCATGCCGAGAATCTaGGTGCCGCTGTCAGAGACC +
Preference number: 5 (lower is better)
Translates to: PSLFSHKMSYIQHILDSISMPRI*VPLSET
Trigger: GGTCTCTGACAGCGGCACCAAGATTCTCGGCATGCT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTTCAACCCAGCCATCCTaGGAGGCCAGCACAAACAGG +
Preference number: 5 (lower is better)
Translates to: PSLFSHKMSYIQHILDSISTQPS*EASTNR
Trigger: CCTGTTTGTGCTGGCCTCCAAGGATGGCTGGGTTGA...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCCTCCTTGGCCTCTTaGTTGCTCTCTTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSISSLAS*LLSSRC
Trigger: GCACCTGGAAGAGAGCAACAAAGAGGCCAAGGAGGA...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCAAGTTGATGGCGCCTTaGAAGGGGTTGTGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: PTENDDEVKGENKLHDSFKLMAP*KGLCSP
Trigger: AGGCGAGCACAACCCCTTCAAAGGCGCCATCAACTT...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCAAGGGCTGGAGATTTaGCAGGAGCTATGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIQGLEI*QELWQA
Trigger: AGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTTG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GCCAAGAGACAGACGCTTTCGCCTCAAAAATATTCTGAGACACATAAAAGAAGAAGGTCAAAGGAACTCTaGGCCTCACGTTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: AKRQTLSPQKYSETHKRRRSKEL*ASRSKE
Trigger: TTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACCT...TCTTCTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGACTTGCCATTACAGTCTaGGTGTTCAGAGGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRLAITV*VFRGRA
Trigger: AGCTCTGCCTCTGAACACCAAGACTGTAATGGCAAG...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAATGGGCAGTGAAGCATaGACCTCAATCTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRMGSEA*TSISSS
Trigger: GCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCAT...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGATGGGCAGTGAAGCATaGACCTCAATCTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLMGSEA*TSISSS
Trigger: GCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCAT...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGCTGGTGTCTGCTGGTaGGGAGTGAACAGACAAGAT +
Preference number: 5 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILAGVCW*GVNRQD
Trigger: ATCTTGTCTGTTCACTCCCAACCAGCAGACACCAGC...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATGCTGGTGTCTGCTGGTaGGGAGTGAACAGACAAGAT +
Preference number: 5 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYAGVCW*GVNRQD
Trigger: ATCTTGTCTGTTCACTCCCAACCAGCAGACACCAGC...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCCCCGGCCAAAGTATTaGCTATCTACGATCTTCCGG +
Preference number: 5 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIPRPKY*LSTIFR
Trigger: CCGGAAGATCGTAGATAGCAAATACTTTGGCCGGGG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCCCGGCCAAAGTATTaGCTATCTACGATCTTCCGG +
Preference number: 5 (lower is better)
Translates to: PTENDDEVKGENKLHDSFPRPKY*LSTIFR
Trigger: CCGGAAGATCGTAGATAGCAAATACTTTGGCCGGGG...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCCCCGGCCAAAGTATTaGCTATCTACGATCTTCCGG +
Preference number: 5 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSPRPKY*LSTIFR
Trigger: CCGGAAGATCGTAGATAGCAAATACTTTGGCCGGGG...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTCCCATGCTGAGGGTATaGACCAGGATAGCGATCATG +
Preference number: 5 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIPMLRV*TRIAIM
Trigger: CATGATCGCTATCCTGGTCAATACCCTCAGCATGGG...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAAGGTCAAAGGAACTCTaGGCCTCACGTTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILRSKEL*ASRSKE
Trigger: TTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACCT...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATCTTGCCATTACAGTCTaGGTGTTCAGAGGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYLAITV*VFRGRA
Trigger: AGCTCTGCCTCTGAACACCAAGACTGTAATGGCAAG...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACTTGCCATTACAGTCTaGGTGTTCAGAGGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSILAITV*VFRGRA
Trigger: AGCTCTGCCTCTGAACACCAAGACTGTAATGGCAAG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATAACAGGAGACGAAACCTaGACTGGGGAGGGAAGATAT +
Preference number: 5 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSITGDET*TGEGRY
Trigger: ATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTGT...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAACAGGAGACGAAACCTaGACTGGGGAGGGAAGATAT +
Preference number: 5 (lower is better)
Translates to: KKEPSLFSHKMSYIQHILTGDET*TGEGRY
Trigger: ATATCTTCCCTCCCCAGTCAAGGTTTCGTCTCCTGT...TAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATATGGGCAGTGAAGCATaGACCTCAATCTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: KEEGTKSLQSQNVVHPAYMGSEA*TSISSS
Trigger: GCTGGAAGAGATTGAGGTCAATGCTTCACTGCCCAT...ATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCGCTGGTGTCTGCTGGTaGGGAGTGAACAGACAAGAT +
Preference number: 5 (lower is better)
Translates to: PTENDDEVKGENKLHDSFAGVCW*GVNRQD
Trigger: ATCTTGTCTGTTCACTCCCAACCAGCAGACACCAGC...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AGAATATACATAGAGATTCTGCACAAACGTATTGCTTTCTCCCAACAGCTCCTGGCAGTTGGTATAGTATaGGTTCCAGTTGACACAGGT +
Preference number: 5 (lower is better)
Translates to: RIYIEILHKRIAFSQQLLAVGIV*VPVDTG
Trigger: ACCTGTGTCAACTGGAACCAATACTATACCAACTGC...CAGGAGCTGTTGGGAGAAAGCAATACGTTTGTGCAGAATCTCTATGTATATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp GAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGAGCAGTTGGTATAGTATaGGTTCCAGTTGACACAGGT +
Preference number: 5 (lower is better)
Translates to: EGTKSLQSQNVVHPAYTRAVGIV*VPVDTG
Trigger: ACCTGTGTCAACTGGAACCAATACTATACCAACTGC...TCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCAGGTCAAAGGAACTCTaGGCCTCACGTTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSRSKEL*ASRSKE
Trigger: TTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACCT...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTAGGTCAAAGGAACTCTaGGCCTCACGTTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIRSKEL*ASRSKE
Trigger: TTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACCT...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCAGGTCAAAGGAACTCTaGGCCTCACGTTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: PTENDDEVKGENKLHDSFRSKEL*ASRSKE
Trigger: TTCCTTGGAACGTGAGGCCAAGAGTTCCTTTGACCT...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCTTGCCATTACAGTCTaGGTGTTCAGAGGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: PTENDDEVKGENKLHDSFLAITV*VFRGRA
Trigger: AGCTCTGCCTCTGAACACCAAGACTGTAATGGCAAG...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp AAAAGAAGAAGGAACCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATACCGAAGGCCACAAGTTaGAATACTGACTCCAAGACA +
Preference number: 5 (lower is better)
Translates to: KRRRNQVSSVTKCRTSSIPKATS*NTDSKT
Trigger: TGTCTTGGAGTCAGTATTCAAACTTGTGGCCTTCGG...TATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGGTTCCTTCTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCCGAAGGCCACAAGTTaGAATACTGACTCCAAGACA +
Preference number: 5 (lower is better)
Translates to: PTENDDEVKGENKLHDSFPKATS*NTDSKT
Trigger: TGTCTTGGAGTCAGTATTCAAACTTGTGGCCTTCGG...GAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CTACAGAAAACGATGACGAGGTTAAAGGAGAAAATAAGTTACATGACAGTTTCCGCAGTTGGTATAGTATaGGTTCCAGTTGACACAGGT +
Preference number: 5 (lower is better)
Translates to: LQKTMTRLKEKISYMTVSAVGIV*VPVDTG
Trigger: ACCTGTGTCAACTGGAACCAATACTATACCAACTGC...GGAAACTGTCATGTAACTTATTTTCTCCTTTAACCTCGTCATCGTTTTCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS-3UTR CAA 90 bp CCAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCAATTGCAGTTGGTATAGTATaGGTTCCAGTTGACACAGGT +
Preference number: 5 (lower is better)
Translates to: PSLFSHKMSYIQHILDSIAVGIV*VPVDTG
Trigger: ACCTGTGTCAACTGGAACCAATACTATACCAACTGC...AATTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 72 bp AGGGATCCTTCGAGTCACTGGCCGGCGCCCTCCTCCTaGGGCAGACGCCAGGACTGCATGGGGGCCGAGGGC +
Preference number: 6 (lower is better)
Translates to: RDPSSHWPAPSS*GRRQDCMGAEG
Trigger: GCCCTCGGCCCCCATGCAGTCCTGGCGTCTGCCTCAGGAGGAGGGCGCCGGCCAGTGACTCGAAGGATCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 72 bp CGCAGGGTGGACCACCACCGCCTTCCCCGCGCAGTGTaGGCACGCTCCTGCAGGATCGCATGCCGTTCTCCC +
Preference number: 6 (lower is better)
Translates to: RRVDHHRLPRAV*ARSCRIACRSP
Trigger: GGGAGAACGGCATGCGATCCTGCAGGAGCGTGCCCACACTGCGCGGGGAAGGCGGTGGTGGTCCACCCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp CACCACCGCCTTCCCCGCGCAGTGTGGGCACGCTCCTaGAGGATCGCATGCCGTTCTCCCGAGGCTGAGAGC +
Preference number: 6 (lower is better)
Translates to: HHRLPRAVWARS*RIACRSPEAES
Trigger: GCTCTCAGCCTCGGGAGAACGGCATGCGATCCTGCAGGAGCGTGCCCACACTGCGCGGGGAAGGCGGTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CAA 90 bp TCCAGGCCTGGGCAAGGGGCTGGCAGGCGGATGTGCTTGGAGACTTaGCTCTGGCTGCCGGAGCGCTGCTGCACCTGGATGCTCGACCCG +
Preference number: 6 (lower is better)
Translates to: SRPGQGAGRRMCLET*LWLPERCCTWMLDP
Trigger: CGGGTCGAGCATCCAGGTGCAGCAGCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGCCCCTTGCCCAGGCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp CTTTGCTCTGGCTGCCGGAGCGCTGCTGCACCTGGATaGTCGACCCGCCCCAGAAGGATGAGGAGCGGGTCA +
Preference number: 6 (lower is better)
Translates to: LCSGCRSAAAPG*STRPRRMRSGS
Trigger: TGACCCGCTCCTCATCCTTCTGGGGCGGGTCGAGCATCCAGGTGCAGCAGCGCTCCGGCAGCCAGAGCAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp CTGGCAGGCGGATGTGCTTGGAGACTTTGCTCTGGCTaGCGGAGCGCTGCTGCACCTGGATGCTCGACCCGC +
Preference number: 6 (lower is better)
Translates to: LAGGCAWRLCSG*RSAAAPGCSTR
Trigger: GCGGGTCGAGCATCCAGGTGCAGCAGCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 72 bp GGGGCTGGCAGGCGGATGTGCTTGGAGACTTTGCTCTaGCTGCCGGAGCGCTGCTGCACCTGGATGCTCGAC +
Preference number: 6 (lower is better)
Translates to: GAGRRMCLETLL*LPERCCTWMLD
Trigger: GTCGAGCATCCAGGTGCAGCAGCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CAA 72 bp GGGCAAGGGGCTGGCAGGCGGATGTGCTTGGAGACTTaGCTCTGGCTGCCGGAGCGCTGCTGCACCTGGATG +
Preference number: 6 (lower is better)
Translates to: GQGAGRRMCLET*LWLPERCCTWM
Trigger: CATCCAGGTGCAGCAGCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACATCCGCCTGCCAGCCCCTTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp GATCAGCCTCCAGAAGGCCAGCACAGAACTAGGCTCTaGATCTGGGCCCAGGCTCGGCCGTCGCCGTCTGTG +
Preference number: 6 (lower is better)
Translates to: DQPPEGQHRTRL*IWAQARPSPSV
Trigger: CACAGACGGCGACGGCCGAGCCTGGGCCCAGATGCAGAGCCTAGTTCTGTGCTGGCCTTCTGGAGGCTGATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 72 bp AGCATGAGCCAGCGGGACCCATTGGCATCCCTGTCCTaGATCTCTGGGCTGGCCCGGGGAACTCTGAGCGTC +
Preference number: 6 (lower is better)
Translates to: SMSQRDPLASLS*ISGLARGTLSV
Trigger: GACGCTCAGAGTTCCCCGGGCCAGCCCAGAGATCCAGGACAGGGATGCCAATGGGTCCCGCTGGCTCATGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 72 bp CGATGGGGACCTGGGAGGGGGCGCCTGGCAACGGACTaGCTCCAAGTGGCAGTCAGCATGGTAGAAGCTGTG +
Preference number: 6 (lower is better)
Translates to: RWGPGRGRLATD*LQVAVSMVEAV
Trigger: CACAGCTTCTACCATGCTGACTGCCACTTGGAGCCAGTCCGTTGCCAGGCGCCCCCTCCCAGGTCCCCATCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 72 bp TGTTCAGAGGCAGAGCTCCGACCGCTGGCTGTTCGATaGAGCCCGGGCACCTGCAGGGTGTCAGGCAGGTCA +
Preference number: 6 (lower is better)
Translates to: CSEAELRPLAVR*SPGTCRVSGRS
Trigger: TGACCTGCCTGACACCCTGCAGGTGCCCGGGCTTCATCGAACAGCCAGCGGTCGGAGCTCTGCCTCTGAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 72 bp GACATAGGCGGGGCTGGGAGCCGCTGTCCAGGCAGCTaGCAGCGATGGAGTGTCTCCTCTGTTCGTCTAGCC +
Preference number: 6 (lower is better)
Translates to: DIGGAGSRCPGS*QRWSVSSVRLA
Trigger: GGCTAGACGAACAGAGGAGACACTCCATCGCTGTCAGCTGCCTGGACAGCGGCTCCCAGCCCCGCCTATGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp CTGCTGGTCCAGCTGCTTGCTGCGCTCCAGGGACTGTaGGGGGAGCTTCGGGCACTTGGCGGTGATTTCATC +
Preference number: 6 (lower is better)
Translates to: LLVQLLAALQGL*GELRALGGDFI
Trigger: GATGAAATCACCGCCAAGTGCCCGAAGCTCCCCGCACAGTCCCTGGAGCGCAGCAAGCAGCTGGACCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 72 bp GGAACTGTTATAGGCCTCATAGTCCAGACCGCAGGGTaGACCACCACCGCCTTCCCCGCGCAGTGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: GTVIGLIVQTAG*TTTAFPAQCGH
Trigger: GTGCCCACACTGCGCGGGGAAGGCGGTGGTGGTCCACCCTGCGGTCTGGACTATGAGGCCTATAACAGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 72 bp GGGGGACTGGCCCCTCCTCAGTGTGAGGTACCATCGTaGGGTGCTCAAGGGAGAAGCCTGAAGAGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: GGLAPPQCEVPS*GAQGRSLKRLL
Trigger: GAGCAGCCTCTTCAGGCTTCTCCCTTGAGCACCCCACGATGGTACCTCACACTGAGGAGGGGCCAGTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CAA 90 bp GGGTCATCAGCCCGCAGGGTGCGGGCCAAACGCCCTGAAGCCGACTaGCCATTACAGTCTTGGTGTTCAGAGGCAGAGCTCCGACCGCTG +
Preference number: 6 (lower is better)
Translates to: GSSARRVRAKRPEAD*PLQSWCSEAELRPL
Trigger: CAGCGGTCGGAGCTCTGCCTCTGAACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGCGTTTGGCCCGCACCCTGCGGGCTGATGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 72 bp CGTCGCCGTCTGTGGGGATCCCGGAGGTCGCTGTGCTaGGCGTCCTGTGTGAACTCATACACAGCCTCACTG +
Preference number: 6 (lower is better)
Translates to: RRRLWGSRRSLC*ASCVNSYTASL
Trigger: CAGTGAGGCTGTGTATGAGTTCACACAGGACGCTCAGCACAGCGACCTCCGGGATCCCCACAGACGGCGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 72 bp CTCTTGGCCTCACGTTCCAAGGAACCCCTGTGGCGATaGTCACTGCCTGCTGGGCTGGCCCGGTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: LLASRSKEPLWR*SLPAGLARSSS
Trigger: AGAAGAGGACCGGGCCAGCCCAGCAGGCAGTGATCATCGCCACAGGGGTTCCTTGGAACGTGAGGCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 72 bp CAGCTGTCTGTCCGTGGGGTGCTCAAGGGAGAAGCCTaGAGAGGCTGCTCCAATGTGGGCCGTGGTGTGTGG +
Preference number: 6 (lower is better)
Translates to: QLSVRGVLKGEA*RGCSNVGRGVW
Trigger: CCACACACCACGGCCCACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAGCACCCCACGGACAGACAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS GCA 72 bp TCTCATGATGGGCAGTTCCAGGCTCAGCGGACCCACTaGTACTGGTGCGGCGAGAGCCAGAGCCCAGTGCTT +
Preference number: 6 (lower is better)
Translates to: SHDGQFQAQRTH*YWCGESQSPVL
Trigger: AAGCACTGGGCTCTGGCTCTCGCCGCACCAGTAGCAGTGGGTCCGCTGAGCCTGGAACTGCCCATCATGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp CCCGCAGGGTGCGGGCCAAACGCCCTGAAGCCGACTTaGCATTACAGTCTTGGTGTTCAGAGGCAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: PAGCGPNALKPT*HYSLGVQRQSS
Trigger: GGAGCTCTGCCTCTGAACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGCGTTTGGCCCGCACCCTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp GGAGCCGGAAGCGCGAGTAGTCAGAGTAGTAGGGTTTaGACTGGGCTTCTGACGCAGCGCTGGCTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: GAGSASSQSSRV*TGLLTQRWLSC
Trigger: GCAGCTCAGCCAGCGCTGCGTCAGAAGCCCAGTGCAAACCCTACTACTCTGACTACTCGCGCTTCCGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107789.8
ENSMUST00000107790.8
CDS GCA 72 bp GCCCCCAGCCCCTGTGTCCTAGGGATCTCTCGGCAGTaGTCCCATTGCGGCACATGTAGCTGTCATTGGGCA +
Preference number: 6 (lower is better)
Translates to: APSPCVLGISRQ*SHCGTCSCHWA
Trigger: TGCCCAATGACAGCTACATGTGCCGCAATGGGAGCACTGCCGAGAGATCCCTAGGACACAGGGGCTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp ATGTGCTTGGAGACTTTGCTCTGGCTGCCGGAGCGCTaGTGCACCTGGATGCTCGACCCGCCCCAGAAGGAT +
Preference number: 6 (lower is better)
Translates to: MCLETLLWLPER*CTWMLDPPQKD
Trigger: ATCCTTCTGGGGCGGGTCGAGCATCCAGGTGCAGCAGCGCTCCGGCAGCCAGAGCAAAGTCTCCAAGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 72 bp TGCTCAAGGGAGAAGCCTGAAGAGGCTGCTCCAATGTaGGCCGTGGTGTGTGGAGCCCCAGGCTTAGGGCTG +
Preference number: 6 (lower is better)
Translates to: CSREKPEEAAPM*AVVCGAPGLGL
Trigger: CAGCCCTAAGCCTGGGGCTCCACACACCACGGCCCACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CAA 72 bp GCCCGCAGGGTGCGGGCCAAACGCCCTGAAGCCGACTaGCCATTACAGTCTTGGTGTTCAGAGGCAGAGCTC +
Preference number: 6 (lower is better)
Translates to: ARRVRAKRPEAD*PLQSWCSEAEL
Trigger: GAGCTCTGCCTCTGAACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGCGTTTGGCCCGCACCCTGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CAA 72 bp AGCCGGGCTCGGACCCAGGCTCGTAAGCGTTCCCCTTaGCTCAGGTTGCCCTCATCATCGCCATCATCCCCA +
Preference number: 6 (lower is better)
Translates to: SRARTQARKRSP*LRLPSSSPSSP
Trigger: TGGGGATGATGGCGATGATGAGGGCAACCTGAGCAAAGGGGAACGCTTACGAGCCTGGGTCCGAGCCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CAA 72 bp CGCAGCAGCCGCAGCACCCTCAGCATGCCGAGAATCTaGGTGCCGCTGTCAGAGACCATGGACACCAGGATG +
Preference number: 6 (lower is better)
Translates to: RSSRSTLSMPRI*VPLSETMDTRM
Trigger: CATCCTGGTGTCCATGGTCTCTGACAGCGGCACCAAGATTCTCGGCATGCTGAGGGTGCTGCGGCTGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 72 bp CCAGGGACTGTGCGGGGAGCTTCGGGCACTTGGCGGTaGTTTCATCTCATGATGGGCAGTTCCAGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: PGTVRGASGTWR*FHLMMGSSRLS
Trigger: GCTGAGCCTGGAACTGCCCATCATGAGATGAAATCACCGCCAAGTGCCCGAAGCTCCCCGCACAGTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 72 bp GTGAGGTACCATCGTGGGGTGCTCAAGGGAGAAGCCTaGAGAGGCTGCTCCAATGTGGGCCGTGGTGTGTGG +
Preference number: 6 (lower is better)
Translates to: VRYHRGVLKGEA*RGCSNVGRGVW
Trigger: CCACACACCACGGCCCACATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAGCACCCCACGATGGTACCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp GCCTACAGCCCTAGAGACCTGGGCCAGCCTGCGGGCTaGTTTGCGGAGGATGTACACCAGGTACTTGAGAAG +
Preference number: 6 (lower is better)
Translates to: AYSPRDLGQPAG*FAEDVHQVLEK
Trigger: CTTCTCAAGTACCTGGTGTACATCCTCCGCAAAGCAGCCCGCAGGCTGGCCCAGGTCTCTAGGGCTGTAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp GGACCCAGGCTCGTAAGCGTTCCCCTTTGCTCAGGTTaGCCTCATCATCGCCATCATCCCCATCCAGTGGGG +
Preference number: 6 (lower is better)
Translates to: GPRLVSVPLCSG*PHHRHHPHPVG
Trigger: CCCCACTGGATGGGGATGATGGCGATGATGAGGGCAACCTGAGCAAAGGGGAACGCTTACGAGCCTGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp GCAGCCGCAGCACCCTCAGCATGCCGAGAATCTTGGTaGCGCTGTCAGAGACCATGGACACCAGGATGTCGA +
Preference number: 6 (lower is better)
Translates to: AAAAPSACRESW*RCQRPWTPGCR
Trigger: TCGACATCCTGGTGTCCATGGTCTCTGACAGCGGCACCAAGATTCTCGGCATGCTGAGGGTGCTGCGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp ACCTCTGACAACAGGTCTTCCCGGCTACCCAGGCCCTaGACGTCCAGGGAGTCAGTCCTTATTGCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: TSDNRSSRLPRP*TSRESVLIAAW
Trigger: CCAGGCAGCAATAAGGACTGACTCCCTGGACGTGCAGGGCCTGGGTAGCCGGGAAGACCTGTTGTCAGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp TCCTCTGACAACAGGTCTTCCCGGCTACCCAGGCCCTaGACGTCCAGGGAGTCAGTCCTTATTGCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: SSDNRSSRLPRP*TSRESVLIAAW
Trigger: CCAGGCAGCAATAAGGACTGACTCCCTGGACGTGCAGGGCCTGGGTAGCCGGGAAGACCTGTTGTCAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107785.2
CDS CCA 72 bp GCCCACAGGCTCCACTGTCTGCCTTGGAGCAAGGGCTaGAGATTTTGCAGGAGCTATGGCAGGCTCCCGTAC +
Preference number: 6 (lower is better)
Translates to: AHRLHCLPWSKG*RFCRSYGRLPY
Trigger: GTACGGGAGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTTGCTCCAAGGCAGACAGTGGAGCCTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 72 bp TACAGTCTTGGTGTTCAGAGGCAGAGCTCCGACCGCTaGCTGTTCGATGAAGCCCGGGCACCTGCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: YSLGVQRQSSDR*LFDEARAPAGC
Trigger: ACACCCTGCAGGTGCCCGGGCTTCATCGAACAGCCAGCGGTCGGAGCTCTGCCTCTGAACACCAAGACTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 72 bp GCAGCAGCCGCAGCACCCTCAGCATGCCGAGAATCTTaGTGCCGCTGTCAGAGACCATGGACACCAGGATGT +
Preference number: 6 (lower is better)
Translates to: AAAAAPSACRES*CRCQRPWTPGC
Trigger: ACATCCTGGTGTCCATGGTCTCTGACAGCGGCACCAAGATTCTCGGCATGCTGAGGGTGCTGCGGCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 72 bp TCAAGTCCCGTGGGGACAGGGGTTCTTCCTGACTGCTaGGCAGGAGGTCTCCTGAAATCCAGCTCAGCTCCG +
Preference number: 6 (lower is better)
Translates to: SSPVGTGVLPDC*AGGLLKSSSAP
Trigger: CGGAGCTGAGCTGGATTTCAGGAGACCTCCTGCCCAGCAGTCAGGAAGAACCCCTGTCCCCACGGGACTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CAA 72 bp GAGCCCAGTGCTTCCCCCACACCTGTGCTGGAGCTCTaGGGCAGTGACATCGGTGTAGCAGCTGTGTGGATG +
Preference number: 6 (lower is better)
Translates to: EPSASPTPVLEL*GSDIGVAAVWM
Trigger: CATCCACACAGCTGCTACACCGATGTCACTGCCCAAGAGCTCCAGCACAGGTGTGGGGGAAGCACTGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CAA 72 bp CTGCGCTCCAGGGACTGTGCGGGGAGCTTCGGGCACTaGGCGGTGATTTCATCTCATGATGGGCAGTTCCAG +
Preference number: 6 (lower is better)
Translates to: LRSRDCAGSFGH*AVISSHDGQFQ
Trigger: CTGGAACTGCCCATCATGAGATGAAATCACCGCCAAGTGCCCGAAGCTCCCCGCACAGTCCCTGGAGCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CAA 90 bp CGAGAGCCAGAGCCCAGTGCTTCCCCCACACCTGTGCTGGAGCTCTaGGGCAGTGACATCGGTGTAGCAGCTGTGTGGATGATGAGAGGT +
Preference number: 6 (lower is better)
Translates to: REPEPSASPTPVLEL*GSDIGVAAVWMMRG
Trigger: ACCTCTCATCATCCACACAGCTGCTACACCGATGTCACTGCCCAAGAGCTCCAGCACAGGTGTGGGGGAAGCACTGGGCTCTGGCTCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 72 bp GGGGATCCCGGAGGTCGCTGTGCTGAGCGTCCTGTGTaGACTCATACACAGCCTCACTGTCTGAGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: GDPGGRCAERPV*THTQPHCLSQA
Trigger: TGCCTGACTCAGACAGTGAGGCTGTGTATGAGTTCACACAGGACGCTCAGCACAGCGACCTCCGGGATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp TGGCAGGCTCCCGTACTCTGTGTCTCCAGGAGCTTGTaGATGGAGCTGAAGGGCCCAGGTGGGATGTTGAAG +
Preference number: 6 (lower is better)
Translates to: WQAPVLCVSRSL*MELKGPGGMLK
Trigger: CTTCAACATCCCACCTGGGCCCTTCAGCTCCATGCACAAGCTCCTGGAGACACAGAGTACGGGAGCCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp GTAGGGACAACTGTCCGGCCCACAGGCTCCACTGTCTaGCTTGGAGCAAGGGCTGGAGATTTTGCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: VGTTVRPTGSTV*LGARAGDFAGA
Trigger: AGCTCCTGCAAAATCTCCAGCCCTTGCTCCAAGGCAGACAGTGGAGCCTGTGGGCCGGACAGTTGTCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CAA 72 bp GATGAAGTCGTCGAAGGCCTGCAGGATCCGGCAGCGTaGGGAGTCACAGGCAATGTCCTCACACGGCCTGAA +
Preference number: 6 (lower is better)
Translates to: DEVVEGLQDPAA*GVTGNVLTRPE
Trigger: TTCAGGCCGTGTGAGGACATTGCCTGTGACTCCCAACGCTGCCGGATCCTGCAGGCCTTCGACGACTTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CAA 90 bp TTGCAGGAGCTATGGCAGGCTCCCGTACTCTGTGTCTCCAGGAGCTaGTGCATGGAGCTGAAGGGCCCAGGTGGGATGTTGAAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: LQELWQAPVLCVSRS*CMELKGPGGMLKLV
Trigger: CACCAGCTTCAACATCCCACCTGGGCCCTTCAGCTCCATGCACAAGCTCCTGGAGACACAGAGTACGGGAGCCTGCCATAGCTCCTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp CCCTGTGTCCTAGGGATCTCTCGGCAGTGCTCCCATTaGGGCACATGTAGCTGTCATTGGGCAGAGAGTGTG +
Preference number: 6 (lower is better)
Translates to: PCVLGISRQCSH*GTCSCHWAESV
Trigger: CACACTCTCTGCCCAATGACAGCTACATGTGCCGCAATGGGAGCACTGCCGAGAGATCCCTAGGACACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp CTGAAATCCAGCTCAGCTCCGTGTCCAGCTCTAAGCTaGTTCTGGTCTCTTGAGGGTCCTTGGCCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LKSSSAPCPALS*FWSLEGPWPSW
Trigger: CCAGCTGGGCCAAGGACCCTCAAGAGACCAGAAGCAGCTTAGAGCTGGACACGGAGCTGAGCTGGATTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp GGAGCCGGAAGCGCGAGTAGTCAGAGTAGTAGGGTTTaGACTGGGCTTCGGCCATCTGCTTCTCCTTACTCC +
Preference number: 6 (lower is better)
Translates to: GAGSASSQSSRV*TGLRPSASPYS
Trigger: GGAGTAAGGAGAAGCAGATGGCCGAAGCCCAGTGCAAACCCTACTACTCTGACTACTCGCGCTTCCGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107785.2
ENSMUST00000107791.8
ENSMUST00000107793.8
CDS CCA 72 bp CCTTCAGCATCTCTGGTGGAGGGCTGGTATGCACAGTaGGGTATACCTTCCCACTACCCACAGTCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: PSASLVEGWYAQ*GIPSHYPQSCQ
Trigger: CTGGCAGGACTGTGGGTAGTGGGAAGGTATACCCCACTGTGCATACCAGCCCTCCACCAGAGATGCTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 72 bp TCATACACAGCCTCACTGTCTGAGTCAGGCATTTCATaGTCAGCGGACTCTGGCTCCCCTGCTCCTGTCCGG +
Preference number: 6 (lower is better)
Translates to: SYTASLSESGIS*SADSGSPAPVR
Trigger: CCGGACAGGAGCAGGGGAGCCAGAGTCCGCTGACCATGAAATGCCTGACTCAGACAGTGAGGCTGTGTATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CCA 72 bp GCCAAACGCCCTGAAGCCGACTTGCCATTACAGTCTTaGTGTTCAGAGGCAGAGCTCCGACCGCTGGCTGTT +
Preference number: 6 (lower is better)
Translates to: AKRPEADLPLQS*CSEAELRPLAV
Trigger: AACAGCCAGCGGTCGGAGCTCTGCCTCTGAACACCAAGACTGTAATGGCAAGTCGGCTTCAGGGCGTTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CAA 72 bp GCTCCACTGTCTGCCTTGGAGCAAGGGCTGGAGATTTaGCAGGAGCTATGGCAGGCTCCCGTACTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: APLSALEQGLEI*QELWQAPVLCV
Trigger: GACACAGAGTACGGGAGCCTGCCATAGCTCCTGCAAAATCTCCAGCCCTTGCTCCAAGGCAGACAGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 72 bp AGGTCTGGTCCTAGGGGGACTGGCCCCTCCTCAGTGTaGGGTACCATATTGCTCTCCAGGGCACTAAGTAAG +
Preference number: 6 (lower is better)
Translates to: RSGPRGTGPSSV*GTILLSRALSK
Trigger: CTTACTTAGTGCCCTGGAGAGCAATATGGTACCTCACACTGAGGAGGGGCCAGTCCCCCTAGGACCAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS GCA 72 bp AGGGAGATGGTGTCAAACAGCTGTCTGTCCGTGGGGTaGTCAAGGGAGAAGCCTGAAGAGGCTGCTCCAATG +
Preference number: 6 (lower is better)
Translates to: REMVSNSCLSVG*SREKPEEAAPM
Trigger: CATTGGAGCAGCCTCTTCAGGCTTCTCCCTTGAGCACCCCACGGACAGACAGCTGTTTGACACCATCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107789.8
CDS CAA 90 bp TCACCATCCACACTGGGCGAAAAGAAATCAGGCTCTGACTCAGACTaGGTGGCATCTCCCTCTGCCTGGAAACCCTCCACGAGAATGGCG +
Preference number: 6 (lower is better)
Translates to: SPSTLGEKKSGSDSD*VASPSAWKPSTRMA
Trigger: CGCCATTCTCGTGGAGGGTTTCCAGGCAGAGGGAGATGCCACCAAGTCTGAGTCAGAGCCTGATTTCTTTTCGCCCAGTGTGGATGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS TCA 72 bp ACATGTAGCTGTCATTGGGCAGAGAGTGTGTCCGGCTaGCACCAGACTTCCTCACAGTCAGCAGGTCTGGTC +
Preference number: 6 (lower is better)
Translates to: TCSCHWAESVSG*HQTSSQSAGLV
Trigger: GACCAGACCTGCTGACTGTGAGGAAGTCTGGTGTCAGCCGGACACACTCTCTGCCCAATGACAGCTACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp GTTTGCACTGGGCTTCTGACGCAGCGCTGGCTGAGCTaGCGGAAGCAATTACATCGTCCAACATTAGATCGG +
Preference number: 6 (lower is better)
Translates to: VCTGLLTQRWLS*RKQLHRPTLDR
Trigger: CCGATCTAATGTTGGACGATGTAATTGCTTCCGGCAGCTCAGCCAGCGCTGCGTCAGAAGCCCAGTGCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
CDS TCA 72 bp AGCGTCCTGTGTGAACTCATACACAGCCTCACTGTCTaGGTCAGGCATTTCATGGTCAGCGGACTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: SVLCELIHSLTV*VRHFMVSGLWL
Trigger: GAGCCAGAGTCCGCTGACCATGAAATGCCTGACTCAGACAGTGAGGCTGTGTATGAGTTCACACAGGACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp GTCAGAAAGGCCATACCAAAGTTCCTAAAGGTGGCATaGCGGCCCAAGCCCTCACAAGGGTGTGTCTCATCA +
Preference number: 6 (lower is better)
Translates to: VRKAIPKFLKVA*RPKPSQGCVSS
Trigger: TGATGAGACACACCCTTGTGAGGGCTTGGGCCGGCATGCCACCTTTAGGAACTTTGGTATGGCCTTTCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp GTTTGCACTGGGCTTCTGACGCAGCGCTGGCTGAGCTaGCGGAAGCAATTACATCGTCCAACATTAGATTCC +
Preference number: 6 (lower is better)
Translates to: VCTGLLTQRWLS*RKQLHRPTLDS
Trigger: GGAATCTAATGTTGGACGATGTAATTGCTTCCGGCAGCTCAGCCAGCGCTGCGTCAGAAGCCCAGTGCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000103166.9
ENSMUST00000107786.8
ENSMUST00000107789.8
ENSMUST00000107790.8
CDS CCA 72 bp TGGGCGAAAAGAAATCAGGCTCTGACTCAGACTTGGTaGCATCTCCCTCTGCCTGGAAACCCTCCACGAGAA +
Preference number: 6 (lower is better)
Translates to: WAKRNQALTQTW*HLPLPGNPPRE
Trigger: TTCTCGTGGAGGGTTTCCAGGCAGAGGGAGATGCCACCAAGTCTGAGTCAGAGCCTGATTTCTTTTCGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021234.15
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
CDS TCA 72 bp GGTAGTAAGGCTCCAAGTCCACACTCAGCGGGAGGCTaGAATTCTCAGGGAGGAAGCATCGGTTTCGAAGTA +
Preference number: 6 (lower is better)
Translates to: GSKAPSPHSAGG*NSQGGSIGFEV
Trigger: TACTTCGAAACCGATGCTTCCTCCCTGAGAATTTCAGCCTCCCGCTGAGTGTGGACTTGGAGCCTTACTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS GCA 72 bp GAATACAGCTTAACTGTCCACTCGTATCTTCCCGTTTaGCGATTTCCTCTGCCTGGAAACCCTCCACGAGAA +
Preference number: 6 (lower is better)
Translates to: EYSLTVHSYLPV*RFPLPGNPPRE
Trigger: TTCTCGTGGAGGGTTTCCAGGCAGAGGAAATCGGCAAACGGGAAGATACGAGTGGACAGTTAAGCTGTATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107793.8
CDS CAA 72 bp TCCTGGAAGAACCGGCGGAAGCCGAAGGCCACAAGTTaGAATACTGACTCCAAGACAAAGATGACGGTAAAG +
Preference number: 6 (lower is better)
Translates to: SWKNRRKPKATS*NTDSKTKMTVK
Trigger: CTTTACCGTCATCTTTGTCTTGGAGTCAGTATTCAAACTTGTGGCCTTCGGCTTCCGCCGGTTCTTCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS CAA 72 bp ACCAGGATAGCGATCATGATTCCCCGGCCAAAGTATTaGCTATCTACGATCTTCCGGAATGTGTCGCAGATC +
Preference number: 6 (lower is better)
Translates to: TRIAIMIPRPKY*LSTIFRNVSQI
Trigger: GATCTGCGACACATTCCGGAAGATCGTAGATAGCAAATACTTTGGCCGGGGAATCATGATCGCTATCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8
CDS TCA 72 bp GAACCGGCGGAAGCCGAAGGCCACAAGTTTGAATACTaGCTCCAAGACAAAGATGACGGTAAAGATGTAGTT +
Preference number: 6 (lower is better)
Translates to: EPAEAEGHKFEY*LQDKDDGKDVV
Trigger: AACTACATCTTTACCGTCATCTTTGTCTTGGAGTCAGTATTCAAACTTGTGGCCTTCGGCTTCCGCCGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000021234.15
ENSMUST00000100561.10
ENSMUST00000103166.9
ENSMUST00000107785.2
ENSMUST00000107786.8
ENSMUST00000107788.8
ENSMUST00000107789.8
ENSMUST00000107790.8
ENSMUST00000107791.8
ENSMUST00000107792.8
ENSMUST00000107793.8