Pregenerated sensors for CACNA1F (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031142Ensembl transcript IDs: ENSMUST00000115725.9, ENSMUST00000115726.9, ENSMUST00000133637.8, ENSMUST00000155090.8
Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCAAACTGTCAGCACTGCCCCTCTTGCGGTGGCTGGGATTCGGATaGGCTCCAGGCACTTGCAGACAGGTGAAGGTACGCAGTGGGCCG | + |
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Preference number: 1 (lower is better) Translates to: TKLSALPLLRWLGFG*APGTCRQVKVRSGP Trigger: CGGCCCACTGCGTACCTTCACCTGTCTGCAAGTGCCTGGAGCTCATCCGAATCCCAGCCACCGCAAGAGGGGCAGTGCTGACAGTTTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CCA 90 bp | GCCCGGCGGCAGCGTGCACGGAGACCCCGGTTGGCTCGGCGGAAGTaGCGGCAGATCCTTGTTTTCATAATCTTGTTTAGGCAGCGTGTA | + |
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Preference number: 1 (lower is better) Translates to: ARRQRARRPRLARRK*RQILVFIILFRQRV Trigger: TACACGCTGCCTAAACAAGATTATGAAAACAAGGATCTGCCGCCACTTCCGCCGAGCCAACCGGGGTCTCCGTGCACGCTGCCGCCGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR GCA 90 bp | GAGCTTCTCCTGTGTGGTTGGGAGCCAGCCTGTATCACACTGGGCTaGCTGGAGTTGGGAGCCAGCCCATCATCATCACTCGGCCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: ELLLCGWEPACITLG*LELGASPSSSLGPV Trigger: AACTGGGCCGAGTGATGATGATGGGCTGGCTCCCAACTCCAGGCAGCCCAGTGTGATACAGGCTGGCTCCCAACCACACAGGAGAAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR TCA 90 bp | TGCGGTGGCTGGGATTCGGATGAGCTCCAGGCACTTGCAGACAGGTaGAGGTACGCAGTGGGCCGCCAAGTTTGCCAAGGTATCCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: CGGWDSDELQALADR*RYAVGRQVCQGILH Trigger: GTGAAGGATACCTTGGCAAACTTGGCGGCCCACTGCGTACCTTCACCTGTCTGCAAGTGCCTGGAGCTCATCCGAATCCCAGCCACCGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CCA 90 bp | TTCTCCTGTGTGGTTGGGAGCCAGCCTGTATCACACTGGGCTGCCTaGAGTTGGGAGCCAGCCCATCATCATCACTCGGCCCAGTTGAGA | + |
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Preference number: 1 (lower is better) Translates to: FSCVVGSQPVSHWAA*SWEPAHHHHSAQLR Trigger: TCTCAACTGGGCCGAGTGATGATGATGGGCTGGCTCCCAACTCCAGGCAGCCCAGTGTGATACAGGCTGGCTCCCAACCACACAGGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR TCA 90 bp | CCACAAATCGTGGGTCTTGGGCAAAGAGACCTAGGCCTTCGGAGATaGGCACAGCCTCCACCAAACTGTCAGCACTGCCCCTCTTGCGGT | + |
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Preference number: 1 (lower is better) Translates to: PQIVGLGQRDLGLRR*AQPPPNCQHCPSCG Trigger: ACCGCAAGAGGGGCAGTGCTGACAGTTTGGTGGAGGCTGTGCTCATCTCCGAAGGCCTAGGTCTCTTTGCCCAAGACCCACGATTTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR GCA 90 bp | ATCCTGAGGAGACGTACACATCGGAGCACTGAGATGCCAAGAGGCTaGATGGCCCCCACCTCCACCAAAGTGGTTTCTAGGATGCCCCCA | + |
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Preference number: 1 (lower is better) Translates to: ILRRRTHRSTEMPRG*MAPTSTKVVSRMPP Trigger: TGGGGGCATCCTAGAAACCACTTTGGTGGAGGTGGGGGCCATGCAGCCTCTTGGCATCTCAGTGCTCCGATGTGTACGTCTCCTCAGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR GCA 90 bp | ACTGGCAGCACTGTCCATCTCATCCAGGGTCAGGTGACATGCATCTaGAATCTCCTGCTTGGCCAGGGCCACAAATCGTGGGTCTTGGGC | + |
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Preference number: 1 (lower is better) Translates to: TGSTVHLIQGQVTCI*NLLLGQGHKSWVLG Trigger: GCCCAAGACCCACGATTTGTGGCCCTGGCCAAGCAGGAGATTGCAGATGCATGTCACCTGACCCTGGATGAGATGGACAGTGCTGCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR GCA 90 bp | CAGGTCACTGGCAGCACTGTCCATCTCATCCAGGGTCAGGTGACATaGATCTGCAATCTCCTGCTTGGCCAGGGCCACAAATCGTGGGTC | + |
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Preference number: 1 (lower is better) Translates to: QVTGSTVHLIQGQVT*ICNLLLGQGHKSWV Trigger: GACCCACGATTTGTGGCCCTGGCCAAGCAGGAGATTGCAGATGCATGTCACCTGACCCTGGATGAGATGGACAGTGCTGCCAGTGACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CCA 90 bp | TGTGTGGTTGGGAGCCAGCCTGTATCACACTGGGCTGCCTGGAGTTaGGAGCCAGCCCATCATCATCACTCGGCCCAGTTGAGAGAGAAT | + |
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Preference number: 1 (lower is better) Translates to: CVVGSQPVSHWAAWS*EPAHHHHSAQLREN Trigger: ATTCTCTCTCAACTGGGCCGAGTGATGATGATGGGCTGGCTCCCAACTCCAGGCAGCCCAGTGTGATACAGGCTGGCTCCCAACCACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CCA 90 bp | TCCGGGATAGTGAACATGAAAACCCCAGAGCTTCTCCTGTGTGGTTaGGAGCCAGCCTGTATCACACTGGGCTGCCTGGAGTTGGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: SGIVNMKTPELLLCG*EPACITLGCLELGA Trigger: GGCTCCCAACTCCAGGCAGCCCAGTGTGATACAGGCTGGCTCCCAACCACACAGGAGAAGCTCTGGGGTTTTCATGTTCACTATCCCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CCA 90 bp | CCATCTCATCCAGGGTCAGGTGACATGCATCTGCAATCTCCTGCTTaGCCAGGGCCACAAATCGTGGGTCTTGGGCAAAGAGACCTAGGC | + |
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Preference number: 1 (lower is better) Translates to: PSHPGSGDMHLQSPA*PGPQIVGLGQRDLG Trigger: GCCTAGGTCTCTTTGCCCAAGACCCACGATTTGTGGCCCTGGCCAAGCAGGAGATTGCAGATGCATGTCACCTGACCCTGGATGAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR TCA 90 bp | GCCACAAAGGCTGCCCATGGTGCTCTGAAGCTATGGTCAACGTGTTaGGGAAGACGAGCAACAGTACAGCCCAGTAGCAGGCGTTGGACT | + |
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Preference number: 1 (lower is better) Translates to: ATKAAHGALKLWSTC*GRRATVQPSSRRWT Trigger: AGTCCAACGCCTGCTACTGGGCTGTACTGTTGCTCGTCTTCCTCAACACGTTGACCATAGCTTCAGAGCACCATGGGCAGCCTTTGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CCA 90 bp | TTCTTCCGGGATAGTGAACATGAAAACCCCAGAGCTTCTCCTGTGTaGTTGGGAGCCAGCCTGTATCACACTGGGCTGCCTGGAGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: FFRDSEHENPRASPV*LGASLYHTGLPGVG Trigger: CCCAACTCCAGGCAGCCCAGTGTGATACAGGCTGGCTCCCAACCACACAGGAGAAGCTCTGGGGTTTTCATGTTCACTATCCCGGAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CCA 90 bp | CCTCATCACTGTAAAGGGAGGTGGTTCTCTGTGCCAGCAGGTCACTaGCAGCACTGTCCATCTCATCCAGGGTCAGGTGACATGCATCTG | + |
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Preference number: 1 (lower is better) Translates to: PHHCKGRWFSVPAGH*QHCPSHPGSGDMHL Trigger: CAGATGCATGTCACCTGACCCTGGATGAGATGGACAGTGCTGCCAGTGACCTGCTGGCACAGAGAACCACCTCCCTTTACAGTGATGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR GCA 90 bp | CACCAGGCACCAATACTTTGTTCTCCTTTGGAGGGTTTCCTTCACTaGTCTTCTCTCTGCCCTTGTCTTTGGCAGTGCCTGCATCCCCGC | + |
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Preference number: 1 (lower is better) Translates to: HQAPILCSPLEGFLH*SSLCPCLWQCLHPR Trigger: GCGGGGATGCAGGCACTGCCAAAGACAAGGGCAGAGAGAAGAGCAGTGAAGGAAACCCTCCAAAGGAGAACAAAGTATTGGTGCCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CCA 90 bp | CCACACGCGGTACTGATGAGGATTCTTAGGGATGTATCGGCGGAGTaGCTGAGCTTTGAGGGCATATTCCACACACTGGCGCTGGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: PHAVLMRILRDVSAE*LSFEGIFHTLALVL Trigger: AAGAACCAGCGCCAGTGTGTGGAATATGCCCTCAAAGCTCAGCCACTCCGCCGATACATCCCTAAGAATCCTCATCAGTACCGCGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CCA 90 bp | CCATCGAGATTGGGGCTGGGAGTCTATGGAGTCTTTGTATGGTTCTaGGTTGTTCTCAGCTTCCTCTTCCTCAGCCTCCTGACCCACTGC | + |
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Preference number: 1 (lower is better) Translates to: PSRLGLGVYGVFVWF*VVLSFLFLSLLTHC Trigger: GCAGTGGGTCAGGAGGCTGAGGAAGAGGAAGCTGAGAACAACCCAGAACCATACAAAGACTCCATAGACTCCCAGCCCCAATCTCGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CCA 90 bp | ATTCGGATGAGCTCCAGGCACTTGCAGACAGGTGAAGGTACGCAGTaGGCCGCCAAGTTTGCCAAGGTATCCTTCACCCACTGTAGATTC | + |
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Preference number: 1 (lower is better) Translates to: IRMSSRHLQTGEGTQ*AAKFAKVSFTHCRF Trigger: GAATCTACAGTGGGTGAAGGATACCTTGGCAAACTTGGCGGCCCACTGCGTACCTTCACCTGTCTGCAAGTGCCTGGAGCTCATCCGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR TCA 90 bp | ATACTCTTGGGTCTGGGTGAGCCACAAAGGCTGCCCATGGTGCTCTaGAGCTATGGTCAACGTGTTGAGGAAGACGAGCAACAGTACAGC | + |
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Preference number: 1 (lower is better) Translates to: ILLGLGEPQRLPMVL*SYGQRVEEDEQQYS Trigger: GCTGTACTGTTGCTCGTCTTCCTCAACACGTTGACCATAGCTTCAGAGCACCATGGGCAGCCTTTGTGGCTCACCCAGACCCAAGAGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR TCA 90 bp | TCGGAAGAGGCGAAAGAACGTGATAGATATGCGGGAGCTGTCCTCTaGACTCTCGCCAAGATGGCCTCCGTTATTGACTTCTGTGACGGC | + |
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Preference number: 1 (lower is better) Translates to: SEEAKERDRYAGAVL*TLAKMASVIDFCDG Trigger: GCCGTCACAGAAGTCAATAACGGAGGCCATCTTGGCGAGAGTTCAGAGGACAGCTCCCGCATATCTATCACGTTCTTTCGCCTCTTCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR GCA 90 bp | TTGGCATACTCTTGGGTCTGGGTGAGCCACAAAGGCTGCCCATGGTaGTCTGAAGCTATGGTCAACGTGTTGAGGAAGACGAGCAACAGT | + |
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Preference number: 1 (lower is better) Translates to: LAYSWVWVSHKGCPW*SEAMVNVLRKTSNS Trigger: ACTGTTGCTCGTCTTCCTCAACACGTTGACCATAGCTTCAGAGCACCATGGGCAGCCTTTGTGGCTCACCCAGACCCAAGAGTATGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR GCA 90 bp | GGAAAGAATAGACTCCTCATCACTGTAAAGGGAGGTGGTTCTCTGTaGCAGCAGGTCACTGGCAGCACTGTCCATCTCATCCAGGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: GKNRLLITVKGGGSL*QQVTGSTVHLIQGQ Trigger: CTGACCCTGGATGAGATGGACAGTGCTGCCAGTGACCTGCTGGCACAGAGAACCACCTCCCTTTACAGTGATGAGGAGTCTATTCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CCA 90 bp | AACGTGATAGATATGCGGGAGCTGTCCTCTGAACTCTCGCCAAGATaGCCTCCGTTATTGACTTCTGTGACGGCGATGTCGACTACACTG | + |
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Preference number: 1 (lower is better) Translates to: NVIDMRELSSELSPR*PPLLTSVTAMSTTL Trigger: CAGTGTAGTCGACATCGCCGTCACAGAAGTCAATAACGGAGGCCATCTTGGCGAGAGTTCAGAGGACAGCTCCCGCATATCTATCACGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CCA 90 bp | AGAGTTCCATCGAGATTGGGGCTGGGAGTCTATGGAGTCTTTGTATaGTTCTGGGTTGTTCTCAGCTTCCTCTTCCTCAGCCTCCTGACC | + |
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Preference number: 1 (lower is better) Translates to: RVPSRLGLGVYGVFV*FWVVLSFLFLSLLT Trigger: GGTCAGGAGGCTGAGGAAGAGGAAGCTGAGAACAACCCAGAACCATACAAAGACTCCATAGACTCCCAGCCCCAATCTCGATGGAACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR GCA 90 bp | AGGAGATCCAACAGATTGAACCAGCTACGGCAGAAAGAGCCTCGGTaGAGGAAGGCCCCAAACACTGTCATCTTGAGTAGAATCTCCACA | + |
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Preference number: 1 (lower is better) Translates to: RRSNRLNQLRQKEPR*RKAPNTVILSRIST Trigger: TGTGGAGATTCTACTCAAGATGACAGTGTTTGGGGCCTTCCTGCACCGAGGCTCTTTCTGCCGTAGCTGGTTCAATCTGTTGGATCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR TCA 90 bp | CTACTGAGGATGATGAACACTAGGATGAGACTGGTGAAGATATGGTaGTGTATGAGTGTGTGGCAGGCCTTCCGAAGCGGGTTGGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: LLRMMNTRMRLVKIW*CMSVWQAFRSGLVW Trigger: CCAAACCAACCCGCTTCGGAAGGCCTGCCACACACTCATACATCACCATATCTTCACCAGTCTCATCCTAGTGTTCATCATCCTCAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR GCA 90 bp | CACCTTCTCCTTGGGTACTACTTCCTGCAAGAGTTCCACATGTCCTaGACCATTTTCCTCTTCCTCCTCCTCCTCTTCTTCTTCTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: HLLLGYYFLQEFHMS*TIFLFLLLLFFFFL Trigger: GAGGAAGAAGAAGAAGAGGAGGAGGAGGAAGAGGAAAATGGTGCAGGACATGTGGAACTCTTGCAGGAAGTAGTACCCAAGGAGAAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CCA 90 bp | TCCTTAACAGGTAGAGACACCGAAATCCTAGAGTTCCATCGAGATTaGGGCTGGGAGTCTATGGAGTCTTTGTATGGTTCTGGGTTGTTC | + |
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Preference number: 1 (lower is better) Translates to: SLTGRDTEILEFHRD*GWESMESLYGSGLF Trigger: GAACAACCCAGAACCATACAAAGACTCCATAGACTCCCAGCCCCAATCTCGATGGAACTCTAGGATTTCGGTGTCTCTACCTGTTAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR TCA 90 bp | CATCATGAAGAAGGCGATGATGATGATGTAGACAATGAAGAATACTaGTATCTCCACATGGTAATTGTAGATAGGGCCCTCATCTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: HHEEGDDDDVDNEEY*YLHMVIVDRALIFC Trigger: GCAGAAGATGAGGGCCCTATCTACAATTACCATGTGGAGATATCAGTATTCTTCATTGTCTACATCATCATCATCGCCTTCTTCATGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CAA 90 bp | GCGTTGGACTTGACGGCCCGGCGGCAGCGTGCACGGAGACCCCGGTaGGCTCGGCGGAAGTGGCGGCAGATCCTTGTTTTCATAATCTTG | + |
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Preference number: 2 (lower is better) Translates to: ALDLTARRQRARRPR*ARRKWRQILVFIIL Trigger: CAAGATTATGAAAACAAGGATCTGCCGCCACTTCCGCCGAGCCAACCGGGGTCTCCGTGCACGCTGCCGCCGGGCCGTCAAGTCCAACGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGGCTGCATGGCCCCCACCTCCACCAAAGTGGTTTCTAGGATGCCCCCACCACTGGCTGGGAGGCTaGCGTGGCTGCTGGTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: QEAAWPPPPPKWFLGCPHHWLGG*RGCWWS Trigger: ACTCCACCAGCAGCCACGCCAGCCTCCCAGCCAGTG...GTGGGGGCATCCTAGAAACCACTTTGGTGGAGGTGGGGGCCATGCAGCCTCTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR-3UTR CCA 90 bp | TGCATGGCCCCCACCTCCACCAAAGTGGTTTCTAGGATGCCCCCACAGACCACGGCCAGTGTCACTGGCTaGGAGGCTGGCGTGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: CMAPTSTKVVSRMPPQTTASVTG*EAGVAA Trigger: AGCAGCCACGCCAGCCTCCCAGCCAGTGACACTGGC...CGTGGTCTGTGGGGGCATCCTAGAAACCACTTTGGTGGAGGTGGGGGCCATGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CAA 90 bp | ACTGCCCCTCTTGCGGTGGCTGGGATTCGGATGAGCTCCAGGCACTaGCAGACAGGTGAAGGTACGCAGTGGGCCGCCAAGTTTGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: TAPLAVAGIRMSSRH*QTGEGTQWAAKFAK Trigger: CTTGGCAAACTTGGCGGCCCACTGCGTACCTTCACCTGTCTGCAAGTGCCTGGAGCTCATCCGAATCCCAGCCACCGCAAGAGGGGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR-3UTR TCA 90 bp | TGCATGGCCCCCACCTCCACCAAAGTGGTTTCTAGGATGCCCCCACAGACCACGCTGCCCATGGTGCTCTaGAGCTATGGTCAACGTGTT | + |
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Preference number: 2 (lower is better) Translates to: CMAPTSTKVVSRMPPQTTLPMVL*SYGQRV Trigger: AACACGTTGACCATAGCTTCAGAGCACCATGGGCAG...CGTGGTCTGTGGGGGCATCCTAGAAACCACTTTGGTGGAGGTGGGGGCCATGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR-3UTR TCA 90 bp | TGCATGGCCCCCACCTCCACCAAAGTGGTTTCTAGGATGCCCCCACAGACCACGGGAGCATCTCCACAGTaGAGAGGCAGAGCAGAACTT | + |
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Preference number: 2 (lower is better) Translates to: CMAPTSTKVVSRMPPQTTGASPQ*RGRAEL Trigger: AAGTTCTGCTCTGCCTCTTCACTGTGGAGATGCTCC...CGTGGTCTGTGGGGGCATCCTAGAAACCACTTTGGTGGAGGTGGGGGCCATGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGCACCCTTTGCGTCCTCATTCTCTCCACCAGGCACCAATACTTTGTTCTCCTGGAGCCAGTGTCACTaGCTGGGAGGCTGGCGTGGC | + |
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Preference number: 2 (lower is better) Translates to: LAPFASSFSPPGTNTLFSWSQCH*LGGWRG Trigger: GCCACGCCAGCCTCCCAGCCAGTGACACTGGCTCCA...GGAGAACAAAGTATTGGTGCCTGGTGGAGAGAATGAGGACGCAAAGGGTGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCTTCTTCCTCCTCCTCCTCCTCCTCCATGCCTGGTGCTGCTCCTTCACTTGCCAAGAGGCTGCATaGCCCCCACCTCCACCAAAG | + |
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Preference number: 2 (lower is better) Translates to: FFFFLLLLLLHAWCCSFTCQEAA*PPPPPK Trigger: CTTTGGTGGAGGTGGGGGCCATGCAGCCTCTTGGCA...AGTGAAGGAGCAGCACCAGGCATGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAATAGACTCCTCATCACTGTAAAGGGAGGTGGTTCTCTGTGCCAGCAGGTCTCCGACCTGCAGGCGTaGGGGGCAGCAAACGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: KNRLLITVKGGGSLCQQVSDLQA*GAANVG Trigger: GCCGACGTTTGCTGCCCCCCACGCCTGCAGGTCGGA...GACCTGCTGGCACAGAGAACCACCTCCCTTTACAGTGATGAGGAGTCTATTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CAA 90 bp | TTCCGGGATAGTGAACATGAAAACCCCAGAGCTTCTCCTGTGTGGTaGGGAGCCAGCCTGTATCACACTGGGCTGCCTGGAGTTGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: FRDSEHENPRASPVW*GASLYHTGLPGVGS Trigger: GCTCCCAACTCCAGGCAGCCCAGTGTGATACAGGCTGGCTCCCAACCACACAGGAGAAGCTCTGGGGTTTTCATGTTCACTATCCCGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CAA 90 bp | CCAGGCACTTGCAGACAGGTGAAGGTACGCAGTGGGCCGCCAAGTTaGCCAAGGTATCCTTCACCCACTGTAGATTCCTCCACCAACAAC | + |
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Preference number: 2 (lower is better) Translates to: PGTCRQVKVRSGPPS*PRYPSPTVDSSTNN Trigger: GTTGTTGGTGGAGGAATCTACAGTGGGTGAAGGATACCTTGGCAAACTTGGCGGCCCACTGCGTACCTTCACCTGTCTGCAAGTGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCTTTGCGTCCTCATTCTCTCCACCAGGCACCAATACTTTGTTCTCCTTTGGATGCCTGCCTCCCTCTaGGGGAAGGAAGGGCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: TLCVLILSTRHQYFVLLWMPASL*GKEGQG Trigger: TCCCTGCCCTTCCTTCCCCCAGAGGGAGGCAGGCAT...CCAAAGGAGAACAAAGTATTGGTGCCTGGTGGAGAGAATGAGGACGCAAAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR-3UTR CCA 90 bp | TCCACCAGGCACCAATACTTTGTTCTCCTTTGGAGGGTTTCCTTCACTGCTCTTGGCTGGCGTGGCTGCTaGTGGAGTGTGTGGAGCGAG | + |
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Preference number: 2 (lower is better) Translates to: STRHQYFVLLWRVSFTALGWRGC*WSVWSE Trigger: CTCGCTCCACACACTCCACCAGCAGCCACGCCAGCC...AAGAGCAGTGAAGGAAACCCTCCAAAGGAGAACAAAGTATTGGTGCCTGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CAA 90 bp | CCTCCTCCTCCATGCCTGGTGCTGCTCCTTCACTTCTTGCACCCTTaGCGTCCTCATTCTCTCCACCAGGCACCAATACTTTGTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PPPPCLVLLLHFLHP*RPHSLHQAPILCSP Trigger: AGGAGAACAAAGTATTGGTGCCTGGTGGAGAGAATGAGGACGCAAAGGGTGCAAGAAGTGAAGGAGCAGCACCAGGCATGGAGGAGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCATCTCATCTCCCAGGTCCTCTTCATCAAAGCGGGAAAGAATAGACTCCCCTTGTCTTTGGCAGTaGCTGCATCCCCGCTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: QAISSPRSSSSKRERIDSPCLWQ*LHPRWL Trigger: TAGCCAGCGGGGATGCAGGCACTGCCAAAGACAAGG...GGAGTCTATTCTTTCCCGCTTTGATGAAGAGGACCTGGGAGATGAGATGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCATCTCATCTCCCAGGTCCTCTTCATCAAAGCGGGAAAGAATAGACTCCGGAGGGCAGAGGATGTaGTTGTTGGGGCCTCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: QAISSPRSSSSKRERIDSGGQRM*LLGPLF Trigger: GAAGAGAGGCCCCAACAAGCACATCCTCTGCCCTCC...GGAGTCTATTCTTTCCCGCTTTGATGAAGAGGACCTGGGAGATGAGATGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCATCTCATCTCCCAGGTCCTCTTCATCAAAGCGGGAAAGAATAGACTCCCAGCCTGTATCACACTaGGCTGCCTGGAGTTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: QAISSPRSSSSKRERIDSQPVSH*AAWSWE Trigger: CTCCCAACTCCAGGCAGCCCAGTGTGATACAGGCTG...GGAGTCTATTCTTTCCCGCTTTGATGAAGAGGACCTGGGAGATGAGATGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CAA 90 bp | CGGTTGGCTCGGCGGAAGTGGCGGCAGATCCTTGTTTTCATAATCTaGTTTAGGCAGCGTGTACAGCTAGCCATGGTCCCCTCTTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: RLARRKWRQILVFII*FRQRVQLAMVPSSS Trigger: TGAAGAAGAGGGGACCATGGCTAGCTGTACACGCTGCCTAAACAAGATTATGAAAACAAGGATCTGCCGCCACTTCCGCCGAGCCAACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGAATAGACTCCTCATCACTGTAAAGGGAGGTGGTTCTCTGTGCCAGCAGGTCATCTGCGTGCCGTCCTaGAGAGCCACCTTGCCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: KNRLLITVKGGGSLCQQVICVPS*RATLPN Trigger: GTTTGGCAAGGTGGCTCTTCAGGACGGCACGCAGAT...GACCTGCTGGCACAGAGAACCACCTCCCTTTACAGTGATGAGGAGTCTATTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTCTTCTTCCTCCTCCTCCTCCTCCTCCATGCCTGGTGCTGCTCCTTCACTGGAAGGTATCAAAGGTaGTCCTCTTGGTGTGGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: FFFFLLLLLLHAWCCSFTGRYQR*SSWCGS Trigger: AGACCCACACCAAGAGGAGCACCTTTGATACCTTCC...AGTGAAGGAGCAGCACCAGGCATGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGCCATCTCATCTCCCAGGTCCTCTTCATCAAAGCGGGAAAGAATAGACTCCCAGAAAGAGCCTCGGTaGAGGAAGGCCCCAAACACT | + |
|
Preference number: 2 (lower is better) Translates to: QAISSPRSSSSKRERIDSQKEPR*RKAPNT Trigger: AGTGTTTGGGGCCTTCCTGCACCGAGGCTCTTTCTG...GGAGTCTATTCTTTCCCGCTTTGATGAAGAGGACCTGGGAGATGAGATGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTTTGCGTCCTCATTCTCTCCACCAGGCACCAATACTTTGTTCTCCTTTGGGTGGAGCGAGTAGAGTaGCTGAACCATCGCAGCCGT | + |
|
Preference number: 2 (lower is better) Translates to: TLCVLILSTRHQYFVLLWVERVE*LNHRSR Trigger: ACGGCTGCGATGGTTCAGCCACTCTACTCGCTCCAC...CCAAAGGAGAACAAAGTATTGGTGCCTGGTGGAGAGAATGAGGACGCAAAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAGCGTTGAATGTCACTGTTCCATCTGAGTTGAGGGGCACATTCATTGCCACGACACACCAGCATCCCTaGGAAGAAGGGCCCACCGTA | + |
|
Preference number: 2 (lower is better) Translates to: VALNVTVPSELRGTFIATTHQHP*EEGPTV Trigger: TACGGTGGGCCCTTCTTCCCAGGGATGCTGGTGTGT...CGTGGCAATGAATGTGCCCCTCAACTCAGATGGAACAGTGACATTCAACGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CAA 90 bp | CTTGCACCCTTTGCGTCCTCATTCTCTCCACCAGGCACCAATACTTaGTTCTCCTTTGGAGGGTTTCCTTCACTGCTCTTCTCTCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LAPFASSFSPPGTNT*FSFGGFPSLLFSLP Trigger: GGGCAGAGAGAAGAGCAGTGAAGGAAACCCTCCAAAGGAGAACAAAGTATTGGTGCCTGGTGGAGAGAATGAGGACGCAAAGGGTGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCCATCTCATCTCCCAGGTCCTCTTCATCAAAGCGGGAAAGAATAGACTCCGGGTCTGGTCAAAGTTaGACTTGCCCCCAAACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: QAISSPRSSSSKRERIDSGSGQS*TCPQTA Trigger: AGCTGTTTGGGGGCAAGTTCAACTTTGACCAGACCC...GGAGTCTATTCTTTCCCGCTTTGATGAAGAGGACCTGGGAGATGAGATGGCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCACCAGGCACCAATACTTTGTTCTCCTTTGGAGGGTTTCCTTCACTGCTCTTGGATCTGAAAGACAGTaGGGAGGGCTTGGGGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: STRHQYFVLLWRVSFTALGSERQ*GGLGGR Trigger: CCTTCCCCCAAGCCCTCCTCACTGTCTTTCAGATCC...AAGAGCAGTGAAGGAAACCCTCCAAAGGAGAACAAAGTATTGGTGCCTGGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCACCAGGCACCAATACTTTGTTCTCCTTTGGAGGGTTTCCTTCACTGCTCTTCAGGGGTGTCTGTCATaGAGCCAGTGTCACTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: STRHQYFVLLWRVSFTALQGCLS*SQCHWL Trigger: CAGCCAGTGACACTGGCTCCATGACAGACACCCCTG...AAGAGCAGTGAAGGAAACCCTCCAAAGGAGAACAAAGTATTGGTGCCTGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAATAGACTCCTCATCACTGTAAAGGGAGGTGGTTCTCTGTGCCAGCAGGTCCTCCTCCTCCATGCCTaGTGCTGCTCCTTCACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: KNRLLITVKGGGSLCQQVLLLHA*CCSFTS Trigger: AGAAGTGAAGGAGCAGCACCAGGCATGGAGGAGGAG...GACCTGCTGGCACAGAGAACCACCTCCCTTTACAGTGATGAGGAGTCTATTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCCATCTCATCTCCCAGGTCCTCTTCATCAAAGCGGGAAAGAATAGACTCCCTTTCCAAATCCCAATaGGGGCTGGATGCGTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: QAISSPRSSSSKRERIDSLSKSQ*GLDASQ Trigger: CTGAGACGCATCCAGCCCCCATTGGGATTTGGAAAG...GGAGTCTATTCTTTCCCGCTTTGATGAAGAGGACCTGGGAGATGAGATGGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCCATCTCATCTCCCAGGTCCTCTTCATCAAAGCGGGAAAGAATAGACTCCAGAGCTTCTCCTGTGTaGTTGGGAGCCAGCCTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: QAISSPRSSSSKRERIDSRASPV*LGASLY Trigger: ATACAGGCTGGCTCCCAACCACACAGGAGAAGCTCT...GGAGTCTATTCTTTCCCGCTTTGATGAAGAGGACCTGGGAGATGAGATGGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CAA 90 bp | ATCCTAGAGTTCCATCGAGATTGGGGCTGGGAGTCTATGGAGTCTTaGTATGGTTCTGGGTTGTTCTCAGCTTCCTCTTCCTCAGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: ILEFHRDWGWESMES*YGSGLFSASSSSAS Trigger: GGAGGCTGAGGAAGAGGAAGCTGAGAACAACCCAGAACCATACAAAGACTCCATAGACTCCCAGCCCCAATCTCGATGGAACTCTAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAGCGTTGAATGTCACTGTTCCATCTGAGTTGAGGGGCACATTCATTGCCACGTCACCAGTCAGGATCTaGAAGACAGTGAGGAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: VALNVTVPSELRGTFIATSPVRI*KTVRRA Trigger: AGCCCTCCTCACTGTCTTTCAGATCCTGACTGGTGA...CGTGGCAATGAATGTGCCCCTCAACTCAGATGGAACAGTGACATTCAACGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCCATCTCATCTCCCAGGTCCTCTTCATCAAAGCGGGAAAGAATAGACTCCGGAGATCCAACAGATTaGACCAGCTACGGCAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QAISSPRSSSSKRERIDSGDPTD*TSYGRK Trigger: CTTTCTGCCGTAGCTGGTTCAATCTGTTGGATCTCC...GGAGTCTATTCTTTCCCGCTTTGATGAAGAGGACCTGGGAGATGAGATGGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGAATAGACTCCTCATCACTGTAAAGGGAGGTGGTTCTCTGTGCCAGCAGGTCCTCCATCAGGGTAGATaGGGAAGGAGCCCTTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: KNRLLITVKGGGSLCQQVLHQGR*GRSPCI Trigger: AATGCAAGGGCTCCTTCCTCATCTACCCTGATGGAG...GACCTGCTGGCACAGAGAACCACCTCCCTTTACAGTGATGAGGAGTCTATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCCTTTGCGTCCTCATTCTCTCCACCAGGCACCAATACTTTGTTCTCCTTTGGCACTGCTCTTCTCTCTaGCCTTGTCTTTGGCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: TLCVLILSTRHQYFVLLWHCSSL*PCLWQC Trigger: GCACTGCCAAAGACAAGGGCAGAGAGAAGAGCAGTG...CCAAAGGAGAACAAAGTATTGGTGCCTGGTGGAGAGAATGAGGACGCAAAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCACCAGGCACCAATACTTTGTTCTCCTTTGGAGGGTTTCCTTCACTGCTCTTCCACCTCCACCAAAGTaGTTTCTAGGATGCCCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: STRHQYFVLLWRVSFTALPPPPK*FLGCPH Trigger: GTGGGGGCATCCTAGAAACCACTTTGGTGGAGGTGG...AAGAGCAGTGAAGGAAACCCTCCAAAGGAGAACAAAGTATTGGTGCCTGGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAGCGTTGAATGTCACTGTTCCATCTGAGTTGAGGGGCACATTCATTGCCACGGGTAAATTCCTCGCCTaGGCCAAAGTCAGACTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: VALNVTVPSELRGTFIATGKFLA*AKVRLR Trigger: CCTGAGTCTGACTTTGGCCCAGGCGAGGAATTTACC...CGTGGCAATGAATGTGCCCCTCAACTCAGATGGAACAGTGACATTCAACGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGAATAGACTCCTCATCACTGTAAAGGGAGGTGGTTCTCTGTGCCAGCAGGTCACTTCTTGCACCCTTTaGGTCCTCATTCTCTCCACC | + |
|
Preference number: 2 (lower is better) Translates to: KNRLLITVKGGGSLCQQVTSCTL*VLILST Trigger: GGTGGAGAGAATGAGGACGCAAAGGGTGCAAGAAGT...GACCTGCTGGCACAGAGAACCACCTCCCTTTACAGTGATGAGGAGTCTATTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAGCGTTGAATGTCACTGTTCCATCTGAGTTGAGGGGCACATTCATTGCCACGCATTGCTATGAGAAGTaGCACATAGGGCAAGGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: VALNVTVPSELRGTFIATHCYEK*HIGQGL Trigger: CAGGCCTTGCCCTATGTGGCACTTCTCATAGCAATG...CGTGGCAATGAATGTGCCCCTCAACTCAGATGGAACAGTGACATTCAACGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAGCGTTGAATGTCACTGTTCCATCTGAGTTGAGGGGCACATTCATTGCCACGCCTGAAGAGCCACCTTaGCAAACATCTGCATGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: VALNVTVPSELRGTFIATPEEPP*QTSACQ Trigger: TTGGCATGCAGATGTTTGGCAAGGTGGCTCTTCAGG...CGTGGCAATGAATGTGCCCCTCAACTCAGATGGAACAGTGACATTCAACGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTTTGCGTCCTCATTCTCTCCACCAGGCACCAATACTTTGTTCTCCTTTGGCAAAGGTGCTCCTCTTaGTGTGGGTCTGGTCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: TLCVLILSTRHQYFVLLWQRCSS*CGSGQS Trigger: ACTTTGACCAGACCCACACCAAGAGGAGCACCTTTG...CCAAAGGAGAACAAAGTATTGGTGCCTGGTGGAGAGAATGAGGACGCAAAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCCATCTCATCTCCCAGGTCCTCTTCATCAAAGCGGGAAAGAATAGACTCCGTACCACCTTCTCCTTaGGTACTACTTCCTGCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: QAISSPRSSSSKRERIDSVPPSP*VLLPAR Trigger: TCTTGCAGGAAGTAGTACCCAAGGAGAAGGTGGTAC...GGAGTCTATTCTTTCCCGCTTTGATGAAGAGGACCTGGGAGATGAGATGGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCACCAGGCACCAATACTTTGTTCTCCTTTGGAGGGTTTCCTTCACTGCTCTTTGGACTTCATGGAATTaGGCAAAGATGCCACCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: STRHQYFVLLWRVSFTALWTSWN*AKMPPD Trigger: ATCTGGTGGCATCTTTGCTCAATTCCATGAAGTCCA...AAGAGCAGTGAAGGAAACCCTCCAAAGGAGAACAAAGTATTGGTGCCTGGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAGCGTTGAATGTCACTGTTCCATCTGAGTTGAGGGGCACATTCATTGCCACGGTTTGGCCTCATCAGTaGAACTGTAGAATTTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: VALNVTVPSELRGTFIATVWPHQ*NCRIFP Trigger: AGGGAAAATTCTACAGTTGCACTGATGAGGCCAAAC...CGTGGCAATGAATGTGCCCCTCAACTCAGATGGAACAGTGACATTCAACGCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CCA 72 bp | GCGTGGCTGCTGGTGGAGTGTGTGGAGCGAGTAGAGTaGCTGAACCATCGCAGCCGTCCGCGCCTCCTATTG | + |
|
Preference number: 3 (lower is better) Translates to: AWLLVECVERVE*LNHRSRPRLLL Trigger: CAATAGGAGGCGCGGACGGCTGCGATGGTTCAGCCACTCTACTCGCTCCACACACTCCACCAGCAGCCACGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CCA 72 bp | TCCAGGGGTGTCTGTCATGGAGCCAGTGTCACTGGCTaGGAGGCTGGCGTGGCTGCTGGTGGAGTGTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SRGVCHGASVTG*EAGVAAGGVCG Trigger: TCCACACACTCCACCAGCAGCCACGCCAGCCTCCCAGCCAGTGACACTGGCTCCATGACAGACACCCCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CCA 72 bp | GTGGTTGGGAGCCAGCCTGTATCACACTGGGCTGCCTaGAGTTGGGAGCCAGCCCATCATCATCACTCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: VVGSQPVSHWAA*SWEPAHHHHSA Trigger: GGCCGAGTGATGATGATGGGCTGGCTCCCAACTCCAGGCAGCCCAGTGTGATACAGGCTGGCTCCCAACCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR GCA 72 bp | GCACAGCCTCCACCAAACTGTCAGCACTGCCCCTCTTaGGGTGGCTGGGATTCGGATGAGCTCCAGGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: AQPPPNCQHCPS*GGWDSDELQAL Trigger: AAGTGCCTGGAGCTCATCCGAATCCCAGCCACCGCAAGAGGGGCAGTGCTGACAGTTTGGTGGAGGCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CCA 72 bp | CCTCTTCTTCATCCTCATCTCCAGGGGTGTCTGTCATaGAGCCAGTGTCACTGGCTGGGAGGCTGGCGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PLLHPHLQGCLS*SQCHWLGGWRG Trigger: GCCACGCCAGCCTCCCAGCCAGTGACACTGGCTCCATGACAGACACCCCTGGAGATGAGGATGAAGAAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CCA 72 bp | CCACCAAACTGTCAGCACTGCCCCTCTTGCGGTGGCTaGGATTCGGATGAGCTCCAGGCACTTGCAGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: PPNCQHCPSCGG*DSDELQALADR Trigger: CCTGTCTGCAAGTGCCTGGAGCTCATCCGAATCCCAGCCACCGCAAGAGGGGCAGTGCTGACAGTTTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR TCA 72 bp | GGATGCGTCTCAGCAGGGCAACCACATCCAAGTGCTTaGTGCGGCCCTTGGCTCCGGGGTCATATTCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: GCVSAGQPHPSA*CGPWLRGHIQT Trigger: GGTCTGAATATGACCCCGGAGCCAAGGGCCGCATCAAGCACTTGGATGTGGTTGCCCTGCTGAGACGCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR TCA 72 bp | GTGGGTCTTGGGCAAAGAGACCTAGGCCTTCGGAGATaGGCACAGCCTCCACCAAACTGTCAGCACTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VGLGQRDLGLRR*AQPPPNCQHCP Trigger: GGGGCAGTGCTGACAGTTTGGTGGAGGCTGTGCTCATCTCCGAAGGCCTAGGTCTCTTTGCCCAAGACCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR GCA 72 bp | CTGTGTGGTTGGGAGCCAGCCTGTATCACACTGGGCTaGCTGGAGTTGGGAGCCAGCCCATCATCATCACTC | + |
|
Preference number: 3 (lower is better) Translates to: LCGWEPACITLG*LELGASPSSSL Trigger: GAGTGATGATGATGGGCTGGCTCCCAACTCCAGGCAGCCCAGTGTGATACAGGCTGGCTCCCAACCACACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR GCA 72 bp | GGTGGTAAAAGGACTGGGTTCGAAGGAGTCCCGGCCTaGTCATCCAGGTCAGGAGTCCAGTCAGGGACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GGKRTGFEGVPA*SSRSGVQSGTS Trigger: GGAAGTCCCTGACTGGACTCCTGACCTGGATGAGCAGGCCGGGACTCCTTCGAACCCAGTCCTTTTACCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR TCA 72 bp | ACTGTTGACCCAGAGCCGCTCCCGGACCAAAGGTCGTaGCACATCTCCATCAGGGTAGATGAGGAAGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TVDPEPLPDQRS*HISIRVDEEGA Trigger: GGCTCCTTCCTCATCTACCCTGATGGAGATGTGTCACGACCTTTGGTCCGGGAGCGGCTCTGGGTCAACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR TCA 72 bp | TGGGATTCGGATGAGCTCCAGGCACTTGCAGACAGGTaGAGGTACGCAGTGGGCCGCCAAGTTTGCCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: WDSDELQALADR*RYAVGRQVCQG Trigger: ACCTTGGCAAACTTGGCGGCCCACTGCGTACCTTCACCTGTCTGCAAGTGCCTGGAGCTCATCCGAATCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR GCA 72 bp | CTCCTCCTCCATGCCTGGTGCTGCTCCTTCACTTCTTaGACCCTTTGCGTCCTCATTCTCTCCACCAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLLHAWCCSFTS*TLCVLILSTRH Trigger: GTGCCTGGTGGAGAGAATGAGGACGCAAAGGGTGCAAGAAGTGAAGGAGCAGCACCAGGCATGGAGGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CCA 72 bp | TTCTCCTGTGTGGTTGGGAGCCAGCCTGTATCACACTaGGCTGCCTGGAGTTGGGAGCCAGCCCATCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: FSCVVGSQPVSH*AAWSWEPAHHH Trigger: ATGATGATGGGCTGGCTCCCAACTCCAGGCAGCCCAGTGTGATACAGGCTGGCTCCCAACCACACAGGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR GCA 72 bp | AGACGTACACATCGGAGCACTGAGATGCCAAGAGGCTaGATGGCCCCCACCTCCACCAAAGTGGTTTCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: RRTHRSTEMPRG*MAPTSTKVVSR Trigger: CCTAGAAACCACTTTGGTGGAGGTGGGGGCCATGCAGCCTCTTGGCATCTCAGTGCTCCGATGTGTACGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR GCA 72 bp | CTTCACTGCTCTTCTCTCTGCCCTTGTCTTTGGCAGTaGCTGCATCCCCGCTGGCTAGGTTATCCACGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LHCSSLCPCLWQ*LHPRWLGYPRQ Trigger: TTGCCGTGGATAACCTAGCCAGCGGGGATGCAGGCACTGCCAAAGACAAGGGCAGAGAGAAGAGCAGTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR GCA 72 bp | GGCAGCACTGTCCATCTCATCCAGGGTCAGGTGACATaGATCTGCAATCTCCTGCTTGGCCAGGGCCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSTVHLIQGQVT*ICNLLLGQGHK Trigger: TTTGTGGCCCTGGCCAAGCAGGAGATTGCAGATGCATGTCACCTGACCCTGGATGAGATGGACAGTGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CCA 72 bp | CAGCGTGCACGGAGACCCCGGTTGGCTCGGCGGAAGTaGCGGCAGATCCTTGTTTTCATAATCTTGTTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: QRARRPRLARRK*RQILVFIILFR Trigger: CCTAAACAAGATTATGAAAACAAGGATCTGCCGCCACTTCCGCCGAGCCAACCGGGGTCTCCGTGCACGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CCA 72 bp | GTACACATCGGAGCACTGAGATGCCAAGAGGCTGCATaGCCCCCACCTCCACCAAAGTGGTTTCTAGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: VHIGALRCQEAA*PPPPPKWFLGC Trigger: GCATCCTAGAAACCACTTTGGTGGAGGTGGGGGCCATGCAGCCTCTTGGCATCTCAGTGCTCCGATGTGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CCA 72 bp | CTCTGCCCTTGTCTTTGGCAGTGCCTGCATCCCCGCTaGCTAGGTTATCCACGGCAATGGCAAGAAACACGT | + |
|
Preference number: 3 (lower is better) Translates to: LCPCLWQCLHPR*LGYPRQWQETR Trigger: ACGTGTTTCTTGCCATTGCCGTGGATAACCTAGCCAGCGGGGATGCAGGCACTGCCAAAGACAAGGGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CCA 72 bp | CCAGGGTCAGGTGACATGCATCTGCAATCTCCTGCTTaGCCAGGGCCACAAATCGTGGGTCTTGGGCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PGSGDMHLQSPA*PGPQIVGLGQR Trigger: TCTTTGCCCAAGACCCACGATTTGTGGCCCTGGCCAAGCAGGAGATTGCAGATGCATGTCACCTGACCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGCACCCTTTGCGTCCTCATTCTCTCCACCAGGCACCAATACTTTGTTCTCCTCTCTGCCCTTGTCTTaGGCAGTGCCTGCATCCCCG | + |
|
Preference number: 3 (lower is better) Translates to: LAPFASSFSPPGTNTLFSSLPLS*AVPASP Trigger: CGGGGATGCAGGCACTGCCAAAGACAAGGGCAGAGA...GGAGAACAAAGTATTGGTGCCTGGTGGAGAGAATGAGGACGCAAAGGGTGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR TCA 72 bp | GGTCTGGGTGAGCCACAAAGGCTGCCCATGGTGCTCTaGAGCTATGGTCAACGTGTTGAGGAAGACGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GLGEPQRLPMVL*SYGQRVEEDEQ Trigger: TTGCTCGTCTTCCTCAACACGTTGACCATAGCTTCAGAGCACCATGGGCAGCCTTTGTGGCTCACCCAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR GCA 72 bp | TCTTGGGTCTGGGTGAGCCACAAAGGCTGCCCATGGTaGTCTGAAGCTATGGTCAACGTGTTGAGGAAGACG | + |
|
Preference number: 3 (lower is better) Translates to: SWVWVSHKGCPW*SEAMVNVLRKT Trigger: CGTCTTCCTCAACACGTTGACCATAGCTTCAGAGCACCATGGGCAGCCTTTGTGGCTCACCCAGACCCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR GCA 72 bp | ACTGTCCATCTCATCCAGGGTCAGGTGACATGCATCTaGAATCTCCTGCTTGGCCAGGGCCACAAATCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TVHLIQGQVTCI*NLLLGQGHKSW Trigger: CCACGATTTGTGGCCCTGGCCAAGCAGGAGATTGCAGATGCATGTCACCTGACCCTGGATGAGATGGACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CCA 72 bp | GATATGCGGGAGCTGTCCTCTGAACTCTCGCCAAGATaGCCTCCGTTATTGACTTCTGTGACGGCGATGTCG | + |
|
Preference number: 3 (lower is better) Translates to: DMRELSSELSPR*PPLLTSVTAMS Trigger: CGACATCGCCGTCACAGAAGTCAATAACGGAGGCCATCTTGGCGAGAGTTCAGAGGACAGCTCCCGCATATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CCA 72 bp | AGGCACTGCCTTCAGGGATGGGTACCACCTTCTCCTTaGGTACTACTTCCTGCAAGAGTTCCACATGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RHCLQGWVPPSP*VLLPARVPHVL Trigger: CAGGACATGTGGAACTCTTGCAGGAAGTAGTACCCAAGGAGAAGGTGGTACCCATCCCTGAAGGCAGTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CCA 72 bp | GATAGTGAACATGAAAACCCCAGAGCTTCTCCTGTGTaGTTGGGAGCCAGCCTGTATCACACTGGGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: DSEHENPRASPV*LGASLYHTGLP Trigger: AGGCAGCCCAGTGTGATACAGGCTGGCTCCCAACCACACAGGAGAAGCTCTGGGGTTTTCATGTTCACTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAGCGTTGAATGTCACTGTTCCATCTGAGTTGAGGGGCACATTCATTGCCACGCCCAGGCCGTACAGTTaGAGGAGCATCTCCACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VALNVTVPSELRGTFIATPRPYS*RSISTV Trigger: CACTGTGGAGATGCTCCTCAAACTGTACGGCCTGGG...CGTGGCAATGAATGTGCCCCTCAACTCAGATGGAACAGTGACATTCAACGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR TCA 72 bp | AGAGCAGAACTTTGTTGGCATACTCTTGGGTCTGGGTaGGCCACAAAGGCTGCCCATGGTGCTCTGAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RAELCWHTLGSG*ATKAAHGALKL Trigger: TAGCTTCAGAGCACCATGGGCAGCCTTTGTGGCTCACCCAGACCCAAGAGTATGCCAACAAAGTTCTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CCA 72 bp | GTACTGATGAGGATTCTTAGGGATGTATCGGCGGAGTaGCTGAGCTTTGAGGGCATATTCCACACACTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: VLMRILRDVSAE*LSFEGIFHTLA Trigger: CGCCAGTGTGTGGAATATGCCCTCAAAGCTCAGCCACTCCGCCGATACATCCCTAAGAATCCTCATCAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CCA 72 bp | TTGGGGCTGGGAGTCTATGGAGTCTTTGTATGGTTCTaGGTTGTTCTCAGCTTCCTCTTCCTCAGCCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGLGVYGVFVWF*VVLSFLFLSLL Trigger: CAGGAGGCTGAGGAAGAGGAAGCTGAGAACAACCCAGAACCATACAAAGACTCCATAGACTCCCAGCCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAATAGACTCCTCATCACTGTAAAGGGAGGTGGTTCTCTGTGCCAGCAGGTCAAAGATGCCACCAGATaGCTCAGGGATGCCCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: KNRLLITVKGGGSLCQQVKDATR*LRDAQC Trigger: GCACTGGGCATCCCTGAGCAATCTGGTGGCATCTTT...GACCTGCTGGCACAGAGAACCACCTCCCTTTACAGTGATGAGGAGTCTATTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCCATCTCATCTCCCAGGTCCTCTTCATCAAAGCGGGAAAGAATAGACTCCGCTATGGTCAACGTGTaGAGGAAGACGAGCAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: QAISSPRSSSSKRERIDSAMVNV*RKTSNS Trigger: ACTGTTGCTCGTCTTCCTCAACACGTTGACCATAGC...GGAGTCTATTCTTTCCCGCTTTGATGAAGAGGACCTGGGAGATGAGATGGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAGCGTTGAATGTCACTGTTCCATCTGAGTTGAGGGGCACATTCATTGCCACGTGGGTCTGGTCAAAGTaGAACTTGCCCCCAAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: VALNVTVPSELRGTFIATWVWSK*NLPPNS Trigger: GCTGTTTGGGGGCAAGTTCAACTTTGACCAGACCCA...CGTGGCAATGAATGTGCCCCTCAACTCAGATGGAACAGTGACATTCAACGCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAGCGTTGAATGTCACTGTTCCATCTGAGTTGAGGGGCACATTCATTGCCACGTCAAAGGTGCTCCTCTaGGTGTGGGTCTGGTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VALNVTVPSELRGTFIATSKVLL*VWVWSK Trigger: CTTTGACCAGACCCACACCAAGAGGAGCACCTTTGA...CGTGGCAATGAATGTGCCCCTCAACTCAGATGGAACAGTGACATTCAACGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR TCA 72 bp | GGACCAAAGGTCGTGACACATCTCCATCAGGGTAGATaGGGAAGGAGCCCTTGCATTCTTTCAGGGTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GPKVVTHLHQGR*GRSPCILSGCV Trigger: AACACACCCTGAAAGAATGCAAGGGCTCCTTCCTCATCTACCCTGATGGAGATGTGTCACGACCTTTGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR TCA 72 bp | GCGAAAGAACGTGATAGATATGCGGGAGCTGTCCTCTaGACTCTCGCCAAGATGGCCTCCGTTATTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: AKERDRYAGAVL*TLAKMASVIDF Trigger: GAAGTCAATAACGGAGGCCATCTTGGCGAGAGTTCAGAGGACAGCTCCCGCATATCTATCACGTTCTTTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR GCA 72 bp | GGGATGGGTACCACCTTCTCCTTGGGTACTACTTCCTaGAAGAGTTCCACATGTCCTGCACCATTTTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GMGTTFSLGTTS*KSSTCPAPFSS Trigger: AGAGGAAAATGGTGCAGGACATGTGGAACTCTTGCAGGAAGTAGTACCCAAGGAGAAGGTGGTACCCATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR GCA 72 bp | AACAGATTGAACCAGCTACGGCAGAAAGAGCCTCGGTaGAGGAAGGCCCCAAACACTGTCATCTTGAGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: NRLNQLRQKEPR*RKAPNTVILSR Trigger: TCTACTCAAGATGACAGTGTTTGGGGCCTTCCTGCACCGAGGCTCTTTCTGCCGTAGCTGGTTCAATCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAGCGTTGAATGTCACTGTTCCATCTGAGTTGAGGGGCACATTCATTGCCACGTTTGTTGGCATACTCTaGGGTCTGGGTGAGCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: VALNVTVPSELRGTFIATFVGIL*GLGEPQ Trigger: TTGTGGCTCACCCAGACCCAAGAGTATGCCAACAAA...CGTGGCAATGAATGTGCCCCTCAACTCAGATGGAACAGTGACATTCAACGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAGCGTTGAATGTCACTGTTCCATCTGAGTTGAGGGGCACATTCATTGCCACGAGGCAGAGCAGAACTTaGTTGGCATACTCTTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: VALNVTVPSELRGTFIATRQSRT*LAYSWV Trigger: GACCCAAGAGTATGCCAACAAAGTTCTGCTCTGCCT...CGTGGCAATGAATGTGCCCCTCAACTCAGATGGAACAGTGACATTCAACGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCCATCTCATCTCCCAGGTCCTCTTCATCAAAGCGGGAAAGAATAGACTCCTCAGACCAGATCCTCTaGAATTCATCAAGGTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: QAISSPRSSSSKRERIDSSDQIL*NSSRWW Trigger: CCACCACCTTGATGAATTCAAGAGGATCTGGTCTGA...GGAGTCTATTCTTTCCCGCTTTGATGAAGAGGACCTGGGAGATGAGATGGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR TCA 72 bp | ATGATGAACACTAGGATGAGACTGGTGAAGATATGGTaGTGTATGAGTGTGTGGCAGGCCTTCCGAAGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: MMNTRMRLVKIW*CMSVWQAFRSG Trigger: CCCGCTTCGGAAGGCCTGCCACACACTCATACATCACCATATCTTCACCAGTCTCATCCTAGTGTTCATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR GCA 72 bp | CCAATACTTTGTTCTCCTTTGGAGGGTTTCCTTCACTaGTCTTCTCTCTGCCCTTGTCTTTGGCAGTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PILCSPLEGFLH*SSLCPCLWQCL Trigger: CAGGCACTGCCAAAGACAAGGGCAGAGAGAAGAGCAGTGAAGGAAACCCTCCAAAGGAGAACAAAGTATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAATAGACTCCTCATCACTGTAAAGGGAGGTGGTTCTCTGTGCCAGCAGGTCAGGAGATCCAACAGATaGAACCAGCTACGGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KNRLLITVKGGGSLCQQVRRSNR*NQLRQK Trigger: TTTCTGCCGTAGCTGGTTCAATCTGTTGGATCTCCT...GACCTGCTGGCACAGAGAACCACCTCCCTTTACAGTGATGAGGAGTCTATTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCCATCTCATCTCCCAGGTCCTCTTCATCAAAGCGGGAAAGAATAGACTCCGAGTCTATGGAGTCTTaGTATGGTTCTGGGTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: QAISSPRSSSSKRERIDSESMES*YGSGLF Trigger: GAACAACCCAGAACCATACAAAGACTCCATAGACTC...GGAGTCTATTCTTTCCCGCTTTGATGAAGAGGACCTGGGAGATGAGATGGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCCATCTCATCTCCCAGGTCCTCTTCATCAAAGCGGGAAAGAATAGACTCCATGGCTGAAAGGACGTaGTCAAAGTTAAAATCACTG | + |
|
Preference number: 3 (lower is better) Translates to: QAISSPRSSSSKRERIDSMAERT*SKLKSL Trigger: CAGTGATTTTAACTTTGACAACGTCCTTTCAGCCAT...GGAGTCTATTCTTTCCCGCTTTGATGAAGAGGACCTGGGAGATGAGATGGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR TCA 72 bp | GAAGGCGATGATGATGATGTAGACAATGAAGAATACTaGTATCTCCACATGGTAATTGTAGATAGGGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: EGDDDDVDNEEY*YLHMVIVDRAL Trigger: GAGGGCCCTATCTACAATTACCATGTGGAGATATCAGTATTCTTCATTGTCTACATCATCATCATCGCCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR GCA 72 bp | CACTACAATGAGAGCATCAAACGTATTCCAGGCATCTaGAAAGTAATGCTTGGGTTTAAAGGCGATGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: HYNESIKRIPGI*KVMLGFKGDDF Trigger: AAAATCATCGCCTTTAAACCCAAGCATTACTTTGCAGATGCCTGGAATACGTTTGATGCTCTCATTGTAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGGGAGGCTGGCGTGGCTGCTGGTGGAGTGTGTGGAGCGAGTAGAGTGGCAGGGCCAGTCCCATTaGCTGGACTGGGCTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAGRLAWLLVECVERVEWQGQSH*LDWALG Trigger: CCCCAGAGCCCAGTCCAGCCAATGGGACTGGCCCTG...CCACTCTACTCGCTCCACACACTCCACCAGCAGCCACGCCAGCCTCCCAGCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCTGGGAGGCTGGCGTGGCTGCTGGTGGAGTGTGTGGAGCGAGTAGAGTGGGCTCGAGGTGATCTCTaGGCACTGGCCACCGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LAGRLAWLLVECVERVEWARGDL*ALATAT Trigger: TGTGGCGGTGGCCAGTGCTCAGAGATCACCTCGAGC...CCACTCTACTCGCTCCACACACTCCACCAGCAGCCACGCCAGCCTCCCAGCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGGGTGTCTGTCATGGAGCCAGTGTCACTGGCTGGGAGGCTGGCGTGGCTGACCAACAGGGCAATGTaGAGCAGCGGCACAAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGVSVMEPVSLAGRLAWLTNRAM*SSGTSA Trigger: GGCGCTTGTGCCGCTGCTGCACATTGCCCTGTTGGT...CAGCCACGCCAGCCTCCCAGCCAGTGACACTGGCTCCATGACAGACACCCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CAA 72 bp | CTTGCGGTGGCTGGGATTCGGATGAGCTCCAGGCACTaGCAGACAGGTGAAGGTACGCAGTGGGCCGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAVAGIRMSSRH*QTGEGTQWAAK Trigger: CTTGGCGGCCCACTGCGTACCTTCACCTGTCTGCAAGTGCCTGGAGCTCATCCGAATCCCAGCCACCGCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCTGGGAGGCTGGCGTGGCTGCTGGTGGAGTGTGTGGAGCGAGTAGAGTGGTCCACTCTACAATGCTaGTGCAGGACCGACGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LAGRLAWLLVECVERVEWSTLQC*CRTDEW Trigger: CCATTCGTCGGTCCTGCATCAGCATTGTAGAGTGGA...CCACTCTACTCGCTCCACACACTCCACCAGCAGCCACGCCAGCCTCCCAGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCACCCTTTGCGTCCTCATTCTCTCCACCAGGCACCAATACTTTGTTCTCCGCCACCGTTGGGTCCTaGCCAGCGCCCGCGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LAPFASSFSPPGTNTLFSATVGS*PAPAAL Trigger: GAGTGCCGCGGGCGCTGGCCAGGACCCAACGGTGGC...GGAGAACAAAGTATTGGTGCCTGGTGGAGAGAATGAGGACGCAAAGGGTGCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCTGGGAGGCTGGCGTGGCTGCTGGTGGAGTGTGTGGAGCGAGTAGAGTGGGTCTTGTGTTTGTTGTaGTGGGTCCTTCTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAGRLAWLLVECVERVEWVLCLL*WVLLLG Trigger: CCCAAGAAGAAGGACCCAGCACAACAAACACAAGAC...CCACTCTACTCGCTCCACACACTCCACCAGCAGCCACGCCAGCCTCCCAGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR TCA 90 bp | TGCATGGCCCCCACCTCCACCAAAGTGGTTTCTAGGATGCCCCCACAGACCACGGCACTGTCTCCACGGTaGAAATCACCAGGAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: CMAPTSTKVVSRMPPQTTALSPR*KSPGTR Trigger: ACGTGTTCCTGGTGATTTTCACCGTGGAGACAGTGC...CGTGGTCTGTGGGGGCATCCTAGAAACCACTTTGGTGGAGGTGGGGGCCATGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR TCA 90 bp | TGCATGGCCCCCACCTCCACCAAAGTGGTTTCTAGGATGCCCCCACAGACCACGAATTGTCGAAGTTCGTaGTGCCACCGTTGGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CMAPTSTKVVSRMPPQTTNCRSS*CHRWVL Trigger: CAGGACCCAACGGTGGCATCACGAACTTCGACAATT...CGTGGTCTGTGGGGGCATCCTAGAAACCACTTTGGTGGAGGTGGGGGCCATGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGCTGCATGGCCCCCACCTCCACCAAAGTGGTTTCTAGGATGCCCCCACGCAGGTTCCAGCCATTaGGAATATAGGCGCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QEAAWPPPPPKWFLGCPHAGSSH*EYRRWD Trigger: ATCCCAGCGCCTATATTCGCAATGGCTGGAACCTGC...GTGGGGGCATCCTAGAAACCACTTTGGTGGAGGTGGGGGCCATGCAGCCTCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGCTGCATGGCCCCCACCTCCACCAAAGTGGTTTCTAGGATGCCCCCACGCAGCTCATACCCCATaGCATCCTGCATCCAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QEAAWPPPPPKWFLGCPHAAHTP*HPASSR Trigger: TCTACTGGATGCAGGATGCCATGGGGTATGAGCTGC...GTGGGGGCATCCTAGAAACCACTTTGGTGGAGGTGGGGGCCATGCAGCCTCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CAA 72 bp | TGGATGCGTCTCAGCAGGGCAACCACATCCAAGTGCTaGATGCGGCCCTTGGCTCCGGGGTCATATTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WMRLSRATTSKC*MRPLAPGSYSD Trigger: GTCTGAATATGACCCCGGAGCCAAGGGCCGCATCAAGCACTTGGATGTGGTTGCCCTGCTGAGACGCATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGGGTGTCTGTCATGGAGCCAGTGTCACTGGCTGGGAGGCTGGCGTGGCTGAGATTGTCAGGAGGATaGGAATATCAAAAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGVSVMEPVSLAGRLAWLRLSGG*EYQKAS Trigger: GGAAGCCTTTTGATATTCTCATCCTCCTGACAATCT...CAGCCACGCCAGCCTCCCAGCCAGTGACACTGGCTCCATGACAGACACCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR TCA 90 bp | CAAGAGGCTGCATGGCCCCCACCTCCACCAAAGTGGTTTCTAGGATGCCCCCACCTCCAAGCACAAGGTTaGGGACAAAGAAGGACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QEAAWPPPPPKWFLGCPHLQAQG*GQRRTQ Trigger: TTGGGTCCTTCTTTGTCCTCAACCTTGTGCTTGGAG...GTGGGGGCATCCTAGAAACCACTTTGGTGGAGGTGGGGGCCATGCAGCCTCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGAAGAGGCAGAGCAGAACTTTGTTGGCATACTCTTGGGTCTGGGTGAGCACTCCTCAGCCTGTGTaGTCCAGTCCAGGTAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVKRQSRTLLAYSWVWVSTPQPV*SSPGSP Trigger: GGGGCTACCTGGACTGGATCACACAGGCTGAGGAGT...GCTCACCCAGACCCAAGAGTATGCCAACAAAGTTCTGCTCTGCCTCTTCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR GCA 90 bp | AAGAATAGACTCCTCATCACTGTAAAGGGAGGTGGTTCTCTGTGCCAGCAGGTCGGCTTTCCTCCAGTATaGGGGGCATCTCCTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KNRLLITVKGGGSLCQQVGFPPV*GASPGR Trigger: GCGGCCAGGAGATGCCCCGCATACTGGAGGAAAGCC...GACCTGCTGGCACAGAGAACCACCTCCCTTTACAGTGATGAGGAGTCTATTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTGAAGAGGCAGAGCAGAACTTTGTTGGCATACTCTTGGGTCTGGGTGAGCATCAGTCCCCACAGTTaGAGGCCCAGGACAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVKRQSRTLLAYSWVWVSISPHS*RPRTEP Trigger: GGGCTCTGTCCTGGGCCTCCAACTGTGGGGACTGAT...GCTCACCCAGACCCAAGAGTATGCCAACAAAGTTCTGCTCTGCCTCTTCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTTCTTCCTCCTCCTCCTCCTCCTCCATGCCTGGTGCTGCTCCTTCACTTGCGAATATAGGCGCTaGGATGGAGCACCAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FFFFLLLLLLHAWCCSFTCEYRR*DGAPAH Trigger: ATGGGCTGGTGCTCCATCCCAGCGCCTATATTCGCA...AGTGAAGGAGCAGCACCAGGCATGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR CCA 90 bp | TGCATGGCCCCCACCTCCACCAAAGTGGTTTCTAGGATGCCCCCACAGACCACGCCTTTTCTCTTTCCTTaGAGAACTCCCCGCTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CMAPTSTKVVSRMPPQTTPFLFP*RTPRLG Trigger: TCCTAAGCGGGGAGTTCTCCAAGGAAAGAGAAAAGG...CGTGGTCTGTGGGGGCATCCTAGAAACCACTTTGGTGGAGGTGGGGGCCATGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CAA 72 bp | CTCTTCCTCTTCTTCCTCAGTGTCATAGGTGAGGGCTaGACGGATCTCAGGACCCAAGTCCTGCAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFLFFLSVIGEG*TDLRTQVLQAP Trigger: AGGAGCCTGCAGGACTTGGGTCCTGAGATCCGTCAAGCCCTCACCTATGACACTGAGGAAGAAGAGGAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTGAAGAGGCAGAGCAGAACTTTGTTGGCATACTCTTGGGTCTGGGTGAGCCCGCGGCACTCGGTATaGTTCAGTGTGCATGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: TVKRQSRTLLAYSWVWVSPRHSV*FSVHER Trigger: GCGTTCATGCACACTGAACCATACCGAGTGCCGCGG...GCTCACCCAGACCCAAGAGTATGCCAACAAAGTTCTGCTCTGCCTCTTCACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CAA 72 bp | CGGCGGAAGTGGCGGCAGATCCTTGTTTTCATAATCTaGTTTAGGCAGCGTGTACAGCTAGCCATGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRKWRQILVFII*FRQRVQLAMVP Trigger: GGGGACCATGGCTAGCTGTACACGCTGCCTAAACAAGATTATGAAAACAAGGATCTGCCGCCACTTCCGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CAA 72 bp | CCATGCCTGGTGCTGCTCCTTCACTTCTTGCACCCTTaGCGTCCTCATTCTCTCCACCAGGCACCAATACTT | + |
|
Preference number: 4 (lower is better) Translates to: PCLVLLLHFLHP*RPHSLHQAPIL Trigger: AAGTATTGGTGCCTGGTGGAGAGAATGAGGACGCAAAGGGTGCAAGAAGTGAAGGAGCAGCACCAGGCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR CCA 90 bp | TCCACCAGGCACCAATACTTTGTTCTCCTTTGGAGGGTTTCCTTCACTGCTCTTGCCAGTCCCATTGGCTaGACTGGGCTCTGGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: STRHQYFVLLWRVSFTALASPIG*TGLWGC Trigger: ACAACCCCAGAGCCCAGTCCAGCCAATGGGACTGGC...AAGAGCAGTGAAGGAAACCCTCCAAAGGAGAACAAAGTATTGGTGCCTGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CAA 72 bp | AGCATCTCCACAGTGAAGAGGCAGAGCAGAACTTTGTaGGCATACTCTTGGGTCTGGGTGAGCCACAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SISTVKRQSRTL*AYSWVWVSHKG Trigger: GCCTTTGTGGCTCACCCAGACCCAAGAGTATGCCAACAAAGTTCTGCTCTGCCTCTTCACTGTGGAGATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR TCA 90 bp | AAGAATAGACTCCTCATCACTGTAAAGGGAGGTGGTTCTCTGTGCCAGCAGGTCATGGTTCAGTGTGCATaGACGCCCAGAGCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNRLLITVKGGGSLCQQVMVQCA*TPRARR Trigger: TCTTCTGGCTCTGGGCGTTCATGCACACTGAACCAT...GACCTGCTGGCACAGAGAACCACCTCCCTTTACAGTGATGAGGAGTCTATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTTTGCGTCCTCATTCTCTCCACCAGGCACCAATACTTTGTTCTCCTTTGGTCCCATTGGCTGGACTaGGCTCTGGGGTTGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLCVLILSTRHQYFVLLWSHWLD*ALGLYL Trigger: AAGATACAACCCCAGAGCCCAGTCCAGCCAATGGGA...CCAAAGGAGAACAAAGTATTGGTGCCTGGTGGAGAGAATGAGGACGCAAAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CAA 72 bp | ATAGGGCCCTCATCTTCTGCGTTTGCATCTATGGCCTaGTATAGTAGCGCAGGCCAGCCTTCAAAGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IGPSSSAFASMA*YSSAGQPSKVE Trigger: CTCTACCTTTGAAGGCTGGCCTGCGCTACTATACAAGGCCATAGATGCAAACGCAGAAGATGAGGGCCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCGTTGAATGTCACTGTTCCATCTGAGTTGAGGGGCACATTCATTGCCACGCCAATGCCACGCAGTTaGCAAAGATTGTCAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VALNVTVPSELRGTFIATPMPRS*QRLSGG Trigger: TCCTCCTGACAATCTTTGCCAACTGCGTGGCATTGG...CGTGGCAATGAATGTGCCCCTCAACTCAGATGGAACAGTGACATTCAACGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CAA 72 bp | CATTCTCTCCACCAGGCACCAATACTTTGTTCTCCTTaGGAGGGTTTCCTTCACTGCTCTTCTCTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSLHQAPILCSP*EGFLHCSSLCP Trigger: AGGGCAGAGAGAAGAGCAGTGAAGGAAACCCTCCAAAGGAGAACAAAGTATTGGTGCCTGGTGGAGAGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTTTGCGTCCTCATTCTCTCCACCAGGCACCAATACTTTGTTCTCCTTTGGACCTGTTCCAAGTTGTaGTTAGCAGTGTTGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TLCVLILSTRHQYFVLLWTCSKL*LAVLES Trigger: CGACTCCAACACTGCTAACCACAACTTGGAACAGGT...CCAAAGGAGAACAAAGTATTGGTGCCTGGTGGAGAGAATGAGGACGCAAAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| 3UTR CAA 72 bp | TTTGCGTCCTCATTCTCTCCACCAGGCACCAATACTTaGTTCTCCTTTGGAGGGTTTCCTTCACTGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FASSFSPPGTNT*FSFGGFPSLLF Trigger: GAAGAGCAGTGAAGGAAACCCTCCAAAGGAGAACAAAGTATTGGTGCCTGGTGGAGAGAATGAGGACGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| 3UTR CAA 72 bp | AAGAGTGTAGCGTTGAATGTCACTGTTCCATCTGAGTaGAGGGGCACATTCATTGCCACGAGTCTCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSVALNVTVPSE*RGTFIATSLLQ Trigger: CTGCAAGAGACTCGTGGCAATGAATGTGCCCCTCAACTCAGATGGAACAGTGACATTCAACGCTACACTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCGTTGAATGTCACTGTTCCATCTGAGTTGAGGGGCACATTCATTGCCACGTCCATGGTAATACACTaGAACACAGTTAGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VALNVTVPSELRGTFIATSMVIH*NTVSMA Trigger: TGCCATGCTAACTGTGTTCCAGTGTATTACCATGGA...CGTGGCAATGAATGTGCCCCTCAACTCAGATGGAACAGTGACATTCAACGCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| CDS CCA 90 bp | GGGAGGCTGGCGTGGCTGCTGGTGGAGTGTGTGGAGCGAGTAGAGTaGCTGAACCATCGCAGCCGTCCGCGCCTCCTATTGGTCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRLAWLLVECVERVE*LNHRSRPRLLLVSS Trigger: AGAGCTGACCAATAGGAGGCGCGGACGGCTGCGATGGTTCAGCCACTCTACTCGCTCCACACACTCCACCAGCAGCCACGCCAGCCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 |
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| CDS GCA 90 bp | CGTTGGGTCCTGGCCAGCGCCCGCGGCACTCGGTATGGTTCAGTGTaGATGAACGCCCAGAGCCAGAAGATGCACAAGGTGATGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RWVLASARGTRYGSV*MNAQSQKMHKVMGP Trigger: AGGACCCATCACCTTGTGCATCTTCTGGCTCTGGGCGTTCATGCACACTGAACCATACCGAGTGCCGCGGGCGCTGGCCAGGACCCAACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 ENSMUST00000155090.8 |
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| CDS GCA 90 bp | GTGGCCGATGGCCCGCCCGTCCCTCTTCAGCAAGAGAAGCCAAGTTaGCGTCTACTGAGGGGTCATGAAGGTCTAACTCCTCAGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VADGPPVPLQQEKPS*RLLRGHEGLTPQPV Trigger: CACAGGCTGAGGAGTTAGACCTTCATGACCCCTCAGTAGACGGCAACTTGGCTTCTCTTGCTGAAGAGGGACGGGCGGGCCATCGGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 |
||
| CDS-3UTR CAA 90 bp | CTTGCACCCTTTGCGTCCTCATTCTCTCCACCAGGCACCAATACTTTGTTCTCCCCAGGGCCAGTCCCATaGGCTGGACTGGGCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LAPFASSFSPPGTNTLFSPGPVP*AGLGSG Trigger: CCCAGAGCCCAGTCCAGCCAATGGGACTGGCCCTGG...GGAGAACAAAGTATTGGTGCCTGGTGGAGAGAATGAGGACGCAAAGGGTGCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| CDS TCA 90 bp | ATGGGATTAGTAAGGGTGAGGCAGAAGAGCGCTCGAGGTGATCTCTaGGCACTGGCCACCGCCACAGTCTTGTGTTTGTTGTGCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MGLVRVRQKSARGDL*ALATATVLCLLCWV Trigger: GACCCAGCACAACAAACACAAGACTGTGGCGGTGGCCAGTGCTCAGAGATCACCTCGAGCGCTCTTCTGCCTCACCCTTACTAATCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 ENSMUST00000155090.8 |
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| CDS TCA 90 bp | CCGACGAATGGGATTAGTAAGGGTGAGGCAGAAGAGCGCTCGAGGTaGTCTCTGAGCACTGGCCACCGCCACAGTCTTGTGTTTGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PTNGISKGEAEERSR*SLSTGHRHSLVFVV Trigger: CACAACAAACACAAGACTGTGGCGGTGGCCAGTGCTCAGAGATCACCTCGAGCGCTCTTCTGCCTCACCCTTACTAATCCCATTCGTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 ENSMUST00000155090.8 |
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| CDS-3UTR CAA 90 bp | TCCACCAGGCACCAATACTTTGTTCTCCTTTGGAGGGTTTCCTTCACTGCTCTTTATCAGTCCCCACAGTaGGAGGCCCAGGACAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: STRHQYFVLLWRVSFTALYQSPQ*EAQDRA Trigger: GGCTCTGTCCTGGGCCTCCAACTGTGGGGACTGATA...AAGAGCAGTGAAGGAAACCCTCCAAAGGAGAACAAAGTATTGGTGCCTGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| CDS TCA 90 bp | TCGGAAGAGGCGAAAGAACGTGATAGATATGCGGGAGCTGTCCTCTaGACTATTGACTTCTGTGACGGCGATGTCGACTACACTGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SEEAKERDRYAGAVL*TIDFCDGDVDYTAH Trigger: GTGGGCAGTGTAGTCGACATCGCCGTCACAGAAGTCAATAGTTCAGAGGACAGCTCCCGCATATCTATCACGTTCTTTCGCCTCTTCCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115725.9 |
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| CDS GCA 90 bp | AATTCAGGTCCAATACTTTGTTCTCCTTTGGAGGGTTTCCTTCACTaGTCTTCTCTCTGCCCTTGTCTTTGGCAGTGCCTGCATCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: NSGPILCSPLEGFLH*SSLCPCLWQCLHPR Trigger: GCGGGGATGCAGGCACTGCCAAAGACAAGGGCAGAGAGAAGAGCAGTGAAGGAAACCCTCCAAAGGAGAACAAAGTATTGGACCTGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133637.8 |
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| CDS-3UTR CAA 90 bp | TCCACCAGGCACCAATACTTTGTTCTCCTTTGGAGGGTTTCCTTCACTGCTCTTGACTGGGCTCTGGGGTaGTATCTTTCCCGACTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: STRHQYFVLLWRVSFTALDWALG*YLSRLQ Trigger: CTGAAGTCGGGAAAGATACAACCCCAGAGCCCAGTC...AAGAGCAGTGAAGGAAACCCTCCAAAGGAGAACAAAGTATTGGTGCCTGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| CDS-3UTR CAA 90 bp | AAGAATAGACTCCTCATCACTGTAAAGGGAGGTGGTTCTCTGTGCCAGCAGGTCTTGTGGTTAGCAGTGTaGGAGTCGTCCTCAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KNRLLITVKGGGSLCQQVLWLAV*ESSSGK Trigger: CTTCCCTGAGGACGACTCCAACACTGCTAACCACAA...GACCTGCTGGCACAGAGAACCACCTCCCTTTACAGTGATGAGGAGTCTATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| CDS-3UTR CAA 90 bp | AAGAATAGACTCCTCATCACTGTAAAGGGAGGTGGTTCTCTGTGCCAGCAGGTCGCCTTTTCTCTTTCCTaGGAGAACTCCCCGCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KNRLLITVKGGGSLCQQVAFSLS*ENSPLR Trigger: CCTAAGCGGGGAGTTCTCCAAGGAAAGAGAAAAGGC...GACCTGCTGGCACAGAGAACCACCTCCCTTTACAGTGATGAGGAGTCTATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| CDS-3UTR CAA 90 bp | CTTGCACCCTTTGCGTCCTCATTCTCTCCACCAGGCACCAATACTTTGTTCTCCTCTACCTGTTCCAAGTaGTGGTTAGCAGTGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LAPFASSFSPPGTNTLFSSTCSK*WLAVLE Trigger: CTCCAACACTGCTAACCACAACTTGGAACAGGTAGA...GGAGAACAAAGTATTGGTGCCTGGTGGAGAGAATGAGGACGCAAAGGGTGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
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| CDS GCA 90 bp | AGCAGTGTTGGAGTCGTCCTCAGGGAAGGGGATATATACCCCCAATaGCACGCAGTTGGCAAAGATTGTCAGGAGGATGAGAATATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSVGVVLREGDIYPQ*HAVGKDCQEDENIK Trigger: TTTGATATTCTCATCCTCCTGACAATCTTTGCCAACTGCGTGGCATTGGGGGTATATATCCCCTTCCCTGAGGACGACTCCAACACTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 ENSMUST00000155090.8 |
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| CDS TCA 72 bp | CCATCGCAGCCGTCCGCGCCTCCTATTGGTCAGCTCTaGCAGTTGTGGCCGATGGCCCGCCCGTCCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSQPSAPPIGQL*QLWPMARPSLF Trigger: GAAGAGGGACGGGCGGGCCATCGGCCACAACTGTCAGAGCTGACCAATAGGAGGCGCGGACGGCTGCGATGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 |
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| CDS CAA 72 bp | TCCAGTATGCGGGGCATCTCCTGGCCGCCCAGGTCCTaGTTCCAGCAGCACGCTGAACAGCCCGACCACGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSMRGISWPPRS*FQQHAEQPDHD Trigger: GTCGTGGTCGGGCTGTTCAGCGTGCTGCTGGAACAAGGACCTGGGCGGCCAGGAGATGCCCCGCATACTGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 ENSMUST00000155090.8 |
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| CDS CAA 72 bp | GAGTGGCTGAACCATCGCAGCCGTCCGCGCCTCCTATaGGTCAGCTCTGACAGTTGTGGCCGATGGCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: EWLNHRSRPRLL*VSSDSCGRWPA Trigger: GGCGGGCCATCGGCCACAACTGTCAGAGCTGACCAATAGGAGGCGCGGACGGCTGCGATGGTTCAGCCACTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 |
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| CDS CAA 90 bp | GAGCGAGTAGAGTGGCTGAACCATCGCAGCCGTCCGCGCCTCCTATaGGTCAGCTCTGACAGTTGTGGCCGATGGCCCGCCCGTCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ERVEWLNHRSRPRLL*VSSDSCGRWPARPS Trigger: AGAGGGACGGGCGGGCCATCGGCCACAACTGTCAGAGCTGACCAATAGGAGGCGCGGACGGCTGCGATGGTTCAGCCACTCTACTCGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 |
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| CDS GCA 72 bp | CTGGCCAGCGCCCGCGGCACTCGGTATGGTTCAGTGTaGATGAACGCCCAGAGCCAGAAGATGCACAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LASARGTRYGSV*MNAQSQKMHKV Trigger: CACCTTGTGCATCTTCTGGCTCTGGGCGTTCATGCACACTGAACCATACCGAGTGCCGCGGGCGCTGGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 ENSMUST00000155090.8 |
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| CDS CAA 90 bp | TGGCTTTCCTCCAGTATGCGGGGCATCTCCTGGCCGCCCAGGTCCTaGTTCCAGCAGCACGCTGAACAGCCCGACCACGACGATGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: WLSSSMRGISWPPRS*FQQHAEQPDHDDDE Trigger: TTCATCATCGTCGTGGTCGGGCTGTTCAGCGTGCTGCTGGAACAAGGACCTGGGCGGCCAGGAGATGCCCCGCATACTGGAGGAAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 ENSMUST00000155090.8 |
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| CDS TCA 72 bp | GGGATTAGTAAGGGTGAGGCAGAAGAGCGCTCGAGGTaGTCTCTGAGCACTGGCCACCGCCACAGTCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GISKGEAEERSR*SLSTGHRHSLV Trigger: CACAAGACTGTGGCGGTGGCCAGTGCTCAGAGATCACCTCGAGCGCTCTTCTGCCTCACCCTTACTAATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 ENSMUST00000155090.8 |
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| CDS GCA 72 bp | GGCCCGCCCGTCCCTCTTCAGCAAGAGAAGCCAAGTTaGCGTCTACTGAGGGGTCATGAAGGTCTAACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPPVPLQQEKPS*RLLRGHEGLTP Trigger: AGGAGTTAGACCTTCATGACCCCTCAGTAGACGGCAACTTGGCTTCTCTTGCTGAAGAGGGACGGGCGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 |
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| CDS CCA 72 bp | AGGGCCAGGGCCAGTCCCATTGGCTGGACTGGGCTCTaGGGTTGTATCTTTCCCGACTTCAGATTCCGACAT | + |
|
Preference number: 6 (lower is better) Translates to: RARASPIGWTGL*GCIFPDFRFRH Trigger: ATGTCGGAATCTGAAGTCGGGAAAGATACAACCCCAGAGCCCAGTCCAGCCAATGGGACTGGCCCTGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 ENSMUST00000155090.8 |
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| CDS CCA 72 bp | AAAATTGTCGAAGTTCGTGATGCCACCGTTGGGTCCTaGCCAGCGCCCGCGGCACTCGGTATGGTTCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: KIVEVRDATVGS*PAPAALGMVQC Trigger: ACACTGAACCATACCGAGTGCCGCGGGCGCTGGCCAGGACCCAACGGTGGCATCACGAACTTCGACAATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 ENSMUST00000155090.8 |
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| CDS TCA 72 bp | CAGTTGTGGCCCAAGTTGCCGTCTACTGAGGGGTCATaGAGGTCTAACTCCTCAGCCTGTGTGATCCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QLWPKLPSTEGS*RSNSSACVIQS Trigger: GGACTGGATCACACAGGCTGAGGAGTTAGACCTTCATGACCCCTCAGTAGACGGCAACTTGGGCCACAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155090.8 |
||
| CDS CAA 90 bp | CTTGAGGTCTGGAGGCCAGAGGCATTGGATCTCCTGGACCTGGAGTaGCAGGTAGTTGTGATCCACTTGACACGGGTCTGGGAACCAATT | + |
|
Preference number: 6 (lower is better) Translates to: LEVWRPEALDLLDLE*QVVVIHLTRVWEPI Trigger: AATTGGTTCCCAGACCCGTGTCAAGTGGATCACAACTACCTGCAACTCCAGGTCCAGGAGATCCAATGCCTCTGGCCTCCAGACCTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133637.8 |
||
| CDS TCA 72 bp | GCAAGAGAAGCCAAGTTGCCGTCTACTGAGGGGTCATaGAGGTCTAACTCCTCAGCCTGTGTGATCCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AREAKLPSTEGS*RSNSSACVIQS Trigger: GGACTGGATCACACAGGCTGAGGAGTTAGACCTTCATGACCCCTCAGTAGACGGCAACTTGGCTTCTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 |
||
| CDS GCA 72 bp | GGAGTCGTCCTCAGGGAAGGGGATATATACCCCCAATaGCACGCAGTTGGCAAAGATTGTCAGGAGGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: GVVLREGDIYPQ*HAVGKDCQEDE Trigger: CTCATCCTCCTGACAATCTTTGCCAACTGCGTGGCATTGGGGGTATATATCCCCTTCCCTGAGGACGACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 ENSMUST00000155090.8 |
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| CDS CAA 90 bp | ACCAGGAACACGTATTCTACCTGTTCCAAGTTGTGGTTAGCAGTGTaGGAGTCGTCCTCAGGGAAGGGGATATATACCCCCAATGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: TRNTYSTCSKLWLAV*ESSSGKGIYTPNAT Trigger: CGTGGCATTGGGGGTATATATCCCCTTCCCTGAGGACGACTCCAACACTGCTAACCACAACTTGGAACAGGTAGAATACGTGTTCCTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 ENSMUST00000155090.8 |
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| CDS CAA 72 bp | AACGTGATAGATATGCGGGAGCTGTCCTCTGAACTATaGACTTCTGTGACGGCGATGTCGACTACACTGCCC | + |
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Preference number: 6 (lower is better) Translates to: NVIDMRELSSEL*TSVTAMSTTLP Trigger: GGGCAGTGTAGTCGACATCGCCGTCACAGAAGTCAATAGTTCAGAGGACAGCTCCCGCATATCTATCACGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115725.9 |
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| CDS CAA 90 bp | AGGCGAAAGAACGTGATAGATATGCGGGAGCTGTCCTCTGAACTATaGACTTCTGTGACGGCGATGTCGACTACACTGCCCACTACAATG | + |
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Preference number: 6 (lower is better) Translates to: RRKNVIDMRELSSEL*TSVTAMSTTLPTTM Trigger: CATTGTAGTGGGCAGTGTAGTCGACATCGCCGTCACAGAAGTCAATAGTTCAGAGGACAGCTCCCGCATATCTATCACGTTCTTTCGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115725.9 |
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| CDS TCA 72 bp | GCGAAAGAACGTGATAGATATGCGGGAGCTGTCCTCTaGACTATTGACTTCTGTGACGGCGATGTCGACTAC | + |
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Preference number: 6 (lower is better) Translates to: AKERDRYAGAVL*TIDFCDGDVDY Trigger: GTAGTCGACATCGCCGTCACAGAAGTCAATAGTTCAGAGGACAGCTCCCGCATATCTATCACGTTCTTTCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115725.9 |
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| CDS CAA 72 bp | ACGTATTCTACCTGTTCCAAGTTGTGGTTAGCAGTGTaGGAGTCGTCCTCAGGGAAGGGGATATATACCCCC | + |
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Preference number: 6 (lower is better) Translates to: TYSTCSKLWLAV*ESSSGKGIYTP Trigger: GGGGGTATATATCCCCTTCCCTGAGGACGACTCCAACACTGCTAACCACAACTTGGAACAGGTAGAATACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 ENSMUST00000155090.8 |
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| CDS CAA 72 bp | CTGGGAACCAATTCAGGTCCAATACTTTGTTCTCCTTaGGAGGGTTTCCTTCACTGCTCTTCTCTCTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: LGTNSGPILCSP*EGFLHCSSLCP Trigger: AGGGCAGAGAGAAGAGCAGTGAAGGAAACCCTCCAAAGGAGAACAAAGTATTGGACCTGAATTGGTTCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133637.8 |
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| CDS CCA 72 bp | GAGTTGCAGGTAGTTGTGATCCACTTGACACGGGTCTaGGAACCAATTCAGGTCCAATACTTTGTTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: ELQVVVIHLTRV*EPIQVQYFVLL Trigger: AAGGAGAACAAAGTATTGGACCTGAATTGGTTCCCAGACCCGTGTCAAGTGGATCACAACTACCTGCAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133637.8 |
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| CDS CAA 72 bp | TCAGGGAAGGGGATATATACCCCCAATGCCACGCAGTaGGCAAAGATTGTCAGGAGGATGAGAATATCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SGKGIYTPNATQ*AKIVRRMRISK Trigger: TTTTGATATTCTCATCCTCCTGACAATCTTTGCCAACTGCGTGGCATTGGGGGTATATATCCCCTTCCCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000115725.9 ENSMUST00000115726.9 ENSMUST00000133637.8 ENSMUST00000155090.8 |
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