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Pregenerated sensors for CACNA1E (Mus musculus)

Ensembl gene IDs: ENSMUSG00000004110

Ensembl transcript IDs: ENSMUST00000004214.15, ENSMUST00000187541.7, ENSMUST00000211821.2, ENSMUST00000238369.2

Found 832 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTGGGCTATGGCTTTTCTCACCCAGACCAGCCCTTGCTGCTGTTaGCACAGCACCTTGGGCCCTTCTACTCCGGCCCTTCTCTCCCTC +
Preference number: 1 (lower is better)
Translates to: CWAMAFLTQTSPCCC*HSTLGPSTPALLSL
Trigger: GAGGGAGAGAAGGGCCGGAGTAGAAGGGCCCAAGGTGCTGTGGCAACAGCAGCAAGGGCTGGTCTGGGTGAGAAAAGCCATAGCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 90 bp ACAGGCTGCTGGGCTATGGCTTTTCTCACCCAGACCAGCCCTTGCTaGTGTTGCCACAGCACCTTGGGCCCTTCTACTCCGGCCCTTCTC +
Preference number: 1 (lower is better)
Translates to: TGCWAMAFLTQTSPC*CCHSTLGPSTPALL
Trigger: GAGAAGGGCCGGAGTAGAAGGGCCCAAGGTGCTGTGGCAACAGCAGCAAGGGCTGGTCTGGGTGAGAAAAGCCATAGCCCAGCAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 90 bp GGTACAGGCTGCTGGGCTATGGCTTTTCTCACCCAGACCAGCCCTTaGTGCTGTTGCCACAGCACCTTGGGCCCTTCTACTCCGGCCCTT +
Preference number: 1 (lower is better)
Translates to: GTGCWAMAFLTQTSP*CCCHSTLGPSTPAL
Trigger: AAGGGCCGGAGTAGAAGGGCCCAAGGTGCTGTGGCAACAGCAGCAAGGGCTGGTCTGGGTGAGAAAAGCCATAGCCCAGCAGCCTGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 90 bp CCTGAGCACACAGGGAGAGGACAATGGAGGTGGAAGGGGAGGATCTaGGGGTTGGCAGGCCTTAGGTTGGCCTCGTTGGTCACCTGTTAT +
Preference number: 1 (lower is better)
Translates to: PEHTGRGQWRWKGRI*GLAGLRLASLVTCY
Trigger: ATAACAGGTGACCAACGAGGCCAACCTAAGGCCTGCCAACCCTCAGATCCTCCCCTTCCACCTCCATTGTCCTCTCCCTGTGTGCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 90 bp GTGGCCCAAGGTTGTCTTCTACCCATCCTTTACTCTGGGGAGGGATaGAACCCAGGCCTGGCCCAGGGAATATTCAGAGATAGTGGGAGC +
Preference number: 1 (lower is better)
Translates to: VAQGCLLPILYSGEG*NPGLAQGIFRDSGS
Trigger: GCTCCCACTATCTCTGAATATTCCCTGGGCCAGGCCTGGGTTCCATCCCTCCCCAGAGTAAAGGATGGGTAGAAGACAACCTTGGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 90 bp TTGGCTGCCATTCAATCACCTATGACTACTGCAGGAGTGTCAGGCTaGTACACCCCAGTGGATGCTGCCCTTAAGGGGGCGTCTCATGGG +
Preference number: 1 (lower is better)
Translates to: LAAIQSPMTTAGVSG*YTPVDAALKGASHG
Trigger: CCCATGAGACGCCCCCTTAAGGGCAGCATCCACTGGGGTGTATCAGCCTGACACTCCTGCAGTAGTCATAGGTGATTGAATGGCAGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR TCA 90 bp CCAATACTCTGGGTGGGCCAGCATTGGCTGCCATTCAATCACCTATaGCTACTGCAGGAGTGTCAGGCTGATACACCCCAGTGGATGCTG +
Preference number: 1 (lower is better)
Translates to: PILWVGQHWLPFNHL*LLQECQADTPQWML
Trigger: CAGCATCCACTGGGGTGTATCAGCCTGACACTCCTGCAGTAGTCATAGGTGATTGAATGGCAGCCAATGCTGGCCCACCCAGAGTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR GCA 90 bp AGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCTaGCTGGCTTCTGCTTGTCATGCCCCCTCTTCTCCTCTCTCTTGT +
Preference number: 1 (lower is better)
Translates to: REKACPNTSAVIPPP*LASACHAPSSPLSC
Trigger: ACAAGAGAGAGGAGAAGAGGGGGCATGACAAGCAGAAGCCAGGCAGGGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 90 bp CTGCTTCATAAAGTATTCCCGTTTCTCTTGGAGTATGTGATGCTCTaGGGTCCAGGAGGGAAGGACACATCCAGGCTGGGTGGGACAGGG +
Preference number: 1 (lower is better)
Translates to: LLHKVFPFLLEYVML*GPGGKDTSRLGGTG
Trigger: CCCTGTCCCACCCAGCCTGGATGTGTCCTTCCCTCCTGGACCCCAGAGCATCACATACTCCAAGAGAAACGGGAATACTTTATGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 90 bp TGCTGCTGCGGTTGCCCCTGGGGGCAGCCAAAGTGCAAGAGCTGGTaGGGAGATTCTTCTCCTGCTATTTCAACTCTTCCCTCATTAAGA +
Preference number: 1 (lower is better)
Translates to: CCCGCPWGQPKCKSW*GDSSPAISTLPSLR
Trigger: TCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAAGAATCTCCTCACCAGCTCTTGCACTTTGGCTGCCCCCAGGGGCAACCGCAGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 90 bp CAGATGAATGTGGCCACATGGATGAACTTGGCTTTTCAGAACTGCTaGTGCTGCTGCGGTGTCAGCCCAGGGTTAGAAAGAATGGGACAG +
Preference number: 1 (lower is better)
Translates to: QMNVATWMNLAFQNC*CCCGVSPGLERMGQ
Trigger: CTGTCCCATTCTTTCTAACCCTGGGCTGACACCGCAGCAGCAGCAGCAGTTCTGAAAAGCCAAGTTCATCCATGTGGCCACATTCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 90 bp TGGCAGATGAATGTGGCCACATGGATGAACTTGGCTTTTCAGAACTaGTGCTGCTGCTGCGGTGTCAGCCCAGGGTTAGAAAGAATGGGA +
Preference number: 1 (lower is better)
Translates to: WQMNVATWMNLAFQN*CCCCGVSPGLERMG
Trigger: TCCCATTCTTTCTAACCCTGGGCTGACACCGCAGCAGCAGCAGCAGTTCTGAAAAGCCAAGTTCATCCATGTGGCCACATTCATCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 90 bp TTGGCCAATGGAGAAGGTATCAGCTGCTGCTGTTTGGGACAGACCTaGCTAGGGTGTTCTGGGTGGTTCAGAGAGGAAACACTGCAAAAG +
Preference number: 1 (lower is better)
Translates to: LANGEGISCCCLGQT*LGCSGWFREETLQK
Trigger: CTTTTGCAGTGTTTCCTCTCTGAACCACCCAGAACACCCTAGGCAGGTCTGTCCCAAACAGCAGCAGCTGATACCTTCTCCATTGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 90 bp GTGTTAGGCGAGATGCACCAATACTCTGGGTGGGCCAGCATTGGCTaGCATTCAATCACCTATGACTACTGCAGGAGTGTCAGGCTGATA +
Preference number: 1 (lower is better)
Translates to: VLGEMHQYSGWASIG*HSITYDYCRSVRLI
Trigger: TATCAGCCTGACACTCCTGCAGTAGTCATAGGTGATTGAATGGCAGCCAATGCTGGCCCACCCAGAGTATTGGTGCATCTCGCCTAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR GCA 90 bp GTGGCCACATGGATGAACTTGGCTTTTCAGAACTGCTGCTGCTGCTaGGGTGTCAGCCCAGGGTTAGAAAGAATGGGACAGAAGAATAGA +
Preference number: 1 (lower is better)
Translates to: VATWMNLAFQNCCCC*GVSPGLERMGQKNR
Trigger: TCTATTCTTCTGTCCCATTCTTTCTAACCCTGGGCTGACACCGCAGCAGCAGCAGCAGTTCTGAAAAGCCAAGTTCATCCATGTGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 90 bp ATGAATGTGGCCACATGGATGAACTTGGCTTTTCAGAACTGCTGCTaGTGCTGCGGTGTCAGCCCAGGGTTAGAAAGAATGGGACAGAAG +
Preference number: 1 (lower is better)
Translates to: MNVATWMNLAFQNCC*CCGVSPGLERMGQK
Trigger: CTTCTGTCCCATTCTTTCTAACCCTGGGCTGACACCGCAGCAGCAGCAGCAGTTCTGAAAAGCCAAGTTCATCCATGTGGCCACATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 90 bp CCATTCCTTCATGGGCATGTGTTTTTCCTGACACACAGGGCACATTaGCTTGAACCTCCTATCCCTTTGAAGGCTGCTGTACCCTCCTAC +
Preference number: 1 (lower is better)
Translates to: PFLHGHVFFLTHRAH*LEPPIPLKAAVPSY
Trigger: GTAGGAGGGTACAGCAGCCTTCAAAGGGATAGGAGGTTCAAGCCAATGTGCCCTGTGTGTCAGGAAAAACACATGCCCATGAAGGAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 90 bp CGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTTaGACTCCAGTGTTAGGCGAGATGCACCAATACTCTGGGTGGGCC +
Preference number: 1 (lower is better)
Translates to: RAFMLQDIHLTNMHC*TPVLGEMHQYSGWA
Trigger: GGCCCACCCAGAGTATTGGTGCATCTCGCCTAACACTGGAGTTCAACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR GCA 90 bp AATGTGGCCACATGGATGAACTTGGCTTTTCAGAACTGCTGCTGCTaGTGCGGTGTCAGCCCAGGGTTAGAAAGAATGGGACAGAAGAAT +
Preference number: 1 (lower is better)
Translates to: NVATWMNLAFQNCCC*CGVSPGLERMGQKN
Trigger: ATTCTTCTGTCCCATTCTTTCTAACCCTGGGCTGACACCGCAGCAGCAGCAGCAGTTCTGAAAAGCCAAGTTCATCCATGTGGCCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 90 bp AAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGACTCAGTaGCCCAAGGTTGTCTTCTACCCATCCTTTACTCTGGGGAGGGAT +
Preference number: 1 (lower is better)
Translates to: KFPWCFWFGGLGMTQ*PKVVFYPSFTLGRD
Trigger: ATCCCTCCCCAGAGTAAAGGATGGGTAGAAGACAACCTTGGGCCACTGAGTCATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 90 bp ATTGACTTTCACAAACCACCATCCAACAGGTTTGCTGGCTCAGAATaGCCATCCTGTTGCAGGCTTCCCCTAAGGAAAGCTGCATGTCCA +
Preference number: 1 (lower is better)
Translates to: IDFHKPPSNRFAGSE*PSCCRLPLRKAACP
Trigger: TGGACATGCAGCTTTCCTTAGGGGAAGCCTGCAACAGGATGGCCATTCTGAGCCAGCAAACCTGTTGGATGGTGGTTTGTGAAAGTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 90 bp TTGGCCTCGTTGGTCACCTGTTATGGGATGACTTTGGTTTGGGGCTaGCCATGGTTCATGAAAGCTCCATCAATACTCAAAAGAGAAGGC +
Preference number: 1 (lower is better)
Translates to: LASLVTCYGMTLVWG*PWFMKAPSILKREG
Trigger: GCCTTCTCTTTTGAGTATTGATGGAGCTTTCATGAACCATGGTCAGCCCCAAACCAAAGTCATCCCATAACAGGTGACCAACGAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 90 bp GGAGATTCTTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTaGAAAGTCTTCCCAGCTGCTCAGGGCAATGAGCTTAGACACAGG +
Preference number: 1 (lower is better)
Translates to: GDSSPAISTLPSLRC*KVFPAAQGNELRHR
Trigger: CCTGTGTCTAAGCTCATTGCCCTGAGCAGCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAAGAATCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 90 bp ATAGACCTGTGTGCACTCTTTTACAGTTCCCTTGAAATGGTCTTGTaGAGCTCACCCAGGAAGCTTCAGACAAGGCTTCATGAGAAGGAA +
Preference number: 1 (lower is better)
Translates to: IDLCALFYSSLEMVL*SSPRKLQTRLHEKE
Trigger: TTCCTTCTCATGAAGCCTTGTCTGAAGCTTCCTGGGTGAGCTTCACAAGACCATTTCAAGGGAACTGTAAAAGAGTGCACACAGGTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 90 bp CCACAATGTTGGCCTTTGAGGTTAGTACCAGTGCACCTTACCATTTaGAATTTATTCCTGACAAAACACCTCCTGTCCCCTACATGGGCT +
Preference number: 1 (lower is better)
Translates to: PQCWPLRLVPVHLTI*NLFLTKHLLSPTWA
Trigger: AGCCCATGTAGGGGACAGGAGGTGTTTTGTCAGGAATAAATTTCAAATGGTAAGGTGCACTGGTACTAACCTCAAAGGCCAACATTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR TCA 90 bp AAGGGTACTGTGCCCTCTGCAGTATTGGCTTACTATATGAGTTTCTaGAGTCATAGATTCTTTGGGCTGCTTTTTGCCTCCTCCATCTGT +
Preference number: 1 (lower is better)
Translates to: KGTVPSAVLAYYMSF*SHRFFGLLFASSIC
Trigger: ACAGATGGAGGAGGCAAAAAGCAGCCCAAAGAATCTATGACTTCAGAAACTCATATAGTAAGCCAATACTGCAGAGGGCACAGTACCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR TCA 90 bp CTGCTAAGAAGGGTACTGTGCCCTCTGCAGTATTGGCTTACTATATaGGTTTCTGAAGTCATAGATTCTTTGGGCTGCTTTTTGCCTCCT +
Preference number: 1 (lower is better)
Translates to: LLRRVLCPLQYWLTI*VSEVIDSLGCFLPP
Trigger: AGGAGGCAAAAAGCAGCCCAAAGAATCTATGACTTCAGAAACTCATATAGTAAGCCAATACTGCAGAGGGCACAGTACCCTTCTTAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR CCA 90 bp CTAGACCCTTGGGGTAGGTTGGACCAATTTGTGAATTTGTTGTTTTaGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAAT +
Preference number: 1 (lower is better)
Translates to: LDPWGRLDQFVNLLF*CHVTSLGYTRHRRN
Trigger: ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAAATTCACAAATTGGTCCAACCTACCCCAAGGGTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 90 bp AGAAGATTCTCCATGTGGAGATATTTAAAGACAACTCATCTGAACTaGATCAGATTCCTCAGGGGTTCTTGTCTGGTGTTAATCATCACG +
Preference number: 1 (lower is better)
Translates to: RRFSMWRYLKTTHLN*IRFLRGSCLVLIIT
Trigger: CGTGATGATTAACACCAGACAAGAACCCCTGAGGAATCTGATGCAGTTCAGATGAGTTGTCTTTAAATATCTCCACATGGAGAATCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 90 bp TCAAACATACTTAGTGCATTAAGTGTTTCTCCATTGGTGGTTTTCTaGGTGAATTCTAAATCTTGGACTCAGCCTGAGCATTCTAATGCC +
Preference number: 1 (lower is better)
Translates to: SNILSALSVSPLVVF*VNSKSWTQPEHSNA
Trigger: GGCATTAGAATGCTCAGGCTGAGTCCAAGATTTAGAATTCACCCAGAAAACCACCAATGGAGAAACACTTAATGCACTAAGTATGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR CCA 90 bp ATACATGCAATATCCATACTGAAGGCACAGATGAGTTGTGAAGCCTaGATAGTACTCACTATAGCTTCCTATGATGTTCATTTGTCACAT +
Preference number: 1 (lower is better)
Translates to: IHAISILKAQMSCEA*IVLTIASYDVHLSH
Trigger: ATGTGACAAATGAACATCATAGGAAGCTATAGTGAGTACTATCCAGGCTTCACAACTCATCTGTGCCTTCAGTATGGATATTGCATGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 90 bp CTGCTGGGCTATGGCTTTTCTCACCCAGACCAGCCCTTGCTGCTGTaGCCACAGCACCTTGGGCCCTTCTACTCCGGCCCTTCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: LLGYGFSHPDQPLLL*PQHLGPFYSGPSLP
Trigger: AGGGAGAGAAGGGCCGGAGTAGAAGGGCCCAAGGTGCTGTGGCAACAGCAGCAAGGGCTGGTCTGGGTGAGAAAAGCCATAGCCCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGAGCCCTTGCTGCTGTTaGCACAGCACCTTGGGCCCT +
Preference number: 2 (lower is better)
Translates to: FQCVGLQSHGERPVQRPESPCCC*HSTLGP
Trigger: AGGGCCCAAGGTGCTGTGGCAACAGCAGCAAGGGCT...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTACCCAGACCAGCCCTTaGTGCTGTTGCCACAGCACC +
Preference number: 2 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSTQTSP*CCCHST
Trigger: GGTGCTGTGGCAACAGCAGCAAGGGCTGGTCTGGGT...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTACAGAGGCCTGCTGCCTaGCTCCAGCCCACTGTGGTC +
Preference number: 2 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLQRPAA*LQPTVV
Trigger: GACCACAGTGGGCTGGAGGCAGGCAGCAGGCCTCTG...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCGTTGCCACAGCACCTTaGGCCCTTCTACTCCGGCCC +
Preference number: 2 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSVATAP*ALLLRP
Trigger: GGGCCGGAGTAGAAGGGCCCAAGGTGCTGTGGCAAC...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGTTGGTTTTCTCCTTGTaGGAGAAGAGCATGCATCGG +
Preference number: 2 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGLVFSL*EKSMHR
Trigger: CCGATGCATGCTCTTCTCTCACAAGGAGAAAACCAA...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGCTGACAGAGGCCTGCTaGCTGCCTCCAGCCCACTGT +
Preference number: 2 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMLTEAC*LPPAHC
Trigger: ACAGTGGGCTGGAGGCAGGCAGCAGGCCTCTGTCAG...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGAAGTGCAAGAGCTGGTaGGGAGATTCTTCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: FQCVGLQSHGERPVQRPEKCKSW*GDSSPA
Trigger: AGCAGGAGAAGAATCTCCTCACCAGCTCTTGCACTT...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCAGACCAGCCCTTGCTaGTGTTGCCACAGCACCTTG +
Preference number: 2 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSQTSPC*CCHSTL
Trigger: CAAGGTGCTGTGGCAACAGCAGCAAGGGCTGGTCTG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAACCCAGACCAGCCCTTaGTGCTGTTGCCACAGCACC +
Preference number: 2 (lower is better)
Translates to: HCGHSPATNTEFLLCLLETQTSP*CCCHST
Trigger: GGTGCTGTGGCAACAGCAGCAAGGGCTGGTCTGGGT...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGTTGGCTTTTCAGAACTaGTGCTGCTGCTGCGGTGTC +
Preference number: 2 (lower is better)
Translates to: QALIARRESSGQLQGRRLLAFQN*CCCCGV
Trigger: GACACCGCAGCAGCAGCAGCAGTTCTGAAAAGCCAA...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTCAGGCTGCTGGGCTATaGCTTTTCTCACCCAGACCA +
Preference number: 2 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSQAAGL*LFSPRP
Trigger: TGGTCTGGGTGAGAAAAGCCATAGCCCAGCAGCCTG...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCATTCTTAGCTGCCCCTaGGCACACAGGGAGAGGACA +
Preference number: 2 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSILSCP*AHRERT
Trigger: TGTCCTCTCCCTGTGTGCTCAGGGGCAGCTAAGAAT...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCTGTGAGAGAAGAGCATaGATCGGAGGGGATGGCAGC +
Preference number: 2 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSCERRA*IGGDGS
Trigger: GCTGCCATCCCCTCCGATGCATGCTCTTCTCTCACA...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGTGCATGAGATGCTGCTaGGGTTGCCCCTGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: HLDLTISGCANMQQNKDSCMRCC*GCPWGQ
Trigger: CTGCCCCCAGGGGCAACCGCAGCAGCATCTCATGCA...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTTGCATGAGATGCTGCTaGGGTTGCCCCTGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCCMRCC*GCPWGQ
Trigger: CTGCCCCCAGGGGCAACCGCAGCAGCATCTCATGCA...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTACAGACCAGCCCTTGCTaGTGTTGCCACAGCACCTTG +
Preference number: 2 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLQTSPC*CCHSTL
Trigger: CAAGGTGCTGTGGCAACAGCAGCAAGGGCTGGTCTG...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGCTGACAGAGGCCTGCTaGCTGCCTCCAGCCCACTGT +
Preference number: 2 (lower is better)
Translates to: HLDLTISGCANMQQNKDSLTEAC*LPPAHC
Trigger: ACAGTGGGCTGGAGGCAGGCAGCAGGCCTCTGTCAG...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAATGTCTGACAGAGGCCTaGTGCCTGCCTCCAGCCCAC +
Preference number: 2 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIECLTEA*CLPPAH
Trigger: GTGGGCTGGAGGCAGGCAGCAGGCCTCTGTCAGACA...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACTTTCAGAACTGCTGCTaGTGCTGCGGTGTCAGCCCA +
Preference number: 2 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYFQNCC*CCGVSP
Trigger: TGGGCTGACACCGCAGCAGCAGCAGCAGTTCTGAAA...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGACCATCCAACAGGTTTaGTGGCTCAGAATGGCCATC +
Preference number: 2 (lower is better)
Translates to: QALIARRESSGQLQGRRLTIQQV*WLRMAI
Trigger: GATGGCCATTCTGAGCCAGCAAACCTGTTGGATGGT...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGGTTGCCACAGCACCTTaGGCCCTTCTACTCCGGCCC +
Preference number: 2 (lower is better)
Translates to: HLDLTISGCANMQQNKDSVATAP*ALLLRP
Trigger: GGGCCGGAGTAGAAGGGCCCAAGGTGCTGTGGCAAC...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCAGGCTGCTGGGCTATaGCTTTTCTCACCCAGACCA +
Preference number: 2 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSQAAGL*LFSPRP
Trigger: TGGTCTGGGTGAGAAAAGCCATAGCCCAGCAGCCTG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAAGCCTCCAGCCCACTGTaGTCACAGCCCTGCCACCAA +
Preference number: 2 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEASSPL*SQPCHQ
Trigger: TTGGTGGCAGGGCTGTGACCACAGTGGGCTGGAGGC...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGGCCTCCAGCCCACTGTaGTCACAGCCCTGCCACCAA +
Preference number: 2 (lower is better)
Translates to: HLDLTISGCANMQQNKDSASSPL*SQPCHQ
Trigger: TTGGTGGCAGGGCTGTGACCACAGTGGGCTGGAGGC...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGAGCAGCACTTTGGCATaGAATGAGGCTGAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: QALIARRESSGQLQGRRLSSTLA*NEAEQR
Trigger: TCTCTGCTCAGCCTCATTCCATGCCAAAGTGCTGCT...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 90 bp TTAGAGTCTAGGACTGTACCCACCAGCACCTCCAGTTCTGTTTCTTaGACCCTCACCTTCATGGTACAGGCTGCTGGGCTATGGCTTTTC +
Preference number: 2 (lower is better)
Translates to: LESRTVPTSTSSSVS*TLTFMVQAAGLWLF
Trigger: GAAAAGCCATAGCCCAGCAGCCTGTACCATGAAGGTGAGGGTCAAAGAAACAGAACTGGAGGTGCTGGTGGGTACAGTCCTAGACTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGCCCTGCCACCAACACTaGGTTCCTTTTATGTTTGTT +
Preference number: 2 (lower is better)
Translates to: FQCVGLQSHGERPVQRPEPCHQH*VPFMFV
Trigger: AACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGG...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAATTAGTCTTGCTGTCTaGCAGAGGCCTGCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLISLAV*QRPAAC
Trigger: GCAGGCAGCAGGCCTCTGTCAGACAGCAAGACTAAT...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTGCAGGACTATGGCAGTaGCCATGTTGCAAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSAGLWQ*PCCKGK
Trigger: TTTCCCTTTGCAACATGGGCACTGCCATAGTCCTGC...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGAGCCCTTGCTGCTGTTaGCACAGCACCTTGGGCCCT +
Preference number: 2 (lower is better)
Translates to: HLDLTISGCANMQQNKDSSPCCC*HSTLGP
Trigger: AGGGCCCAAGGTGCTGTGGCAACAGCAGCAAGGGCT...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCTTGGCTTTTCAGAACTaGTGCTGCTGCTGCGGTGTC +
Preference number: 2 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSLAFQN*CCCCGV
Trigger: GACACCGCAGCAGCAGCAGCAGTTCTGAAAAGCCAA...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGCCCTCATTAAGATGCTaGAAAGTCTTCCCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: QALIARRESSGQLQGRRLPSLRC*KVFPAA
Trigger: AGCAGCTGGGAAGACTTTCCAGCATCTTAATGAGGG...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACCATGGTACAGGCTGCTaGGCTATGGCTTTTCTCACC +
Preference number: 2 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYHGTGC*AMAFLT
Trigger: GGTGAGAAAAGCCATAGCCCAGCAGCCTGTACCATG...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACCACCTTTGTGGGCCCTaGAGAACCTCCTTTTCTAGC +
Preference number: 2 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYHLCGP*RTSFSS
Trigger: GCTAGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTG...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGTGGCTTTTCTGGGCTTaGCTTAGCATTAGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: FQCVGLQSHGERPVQRPEWLFWA*LSISLA
Trigger: AGCAAGACTAATGCTAAGCCAAGCCCAGAAAAGCCA...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGTGTTCCCTGTCCATTTaGAGAAGTGGCAGAGAACAT +
Preference number: 2 (lower is better)
Translates to: FQCVGLQSHGERPVQRPECSLSI*RSGREH
Trigger: ATGTTCTCTGCCACTTCTCCAAATGGACAGGGAACA...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCGATCCCCAGGCCCCTTaGGAACATTCCCATTTCAGT +
Preference number: 2 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSDPQAP*EHSHFS
Trigger: ACTGAAATGGGAATGTTCCCAAGGGGCCTGGGGATC...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATTACTCTGGGGAGGGATaGAACCCAGGCCTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNYSGEG*NPGLAQ
Trigger: CTGGGCCAGGCCTGGGTTCCATCCCTCCCCAGAGTA...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGTTCCCTTGGTGTTTCTaGTTTGGGGGATTAGGAATG +
Preference number: 2 (lower is better)
Translates to: FQCVGLQSHGERPVQRPEFPWCF*FGGLGM
Trigger: CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAA...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 90 bp CAGCTGATCCTCTTCTACCTGCTTCATAAAGTATTCCCGTTTCTCTaGGAGTATGTGATGCTCTGGGGTCCAGGAGGGAAGGACACATCC +
Preference number: 2 (lower is better)
Translates to: QLILFYLLHKVFPFL*EYVMLWGPGGKDTS
Trigger: GGATGTGTCCTTCCCTCCTGGACCCCAGAGCATCACATACTCCAAGAGAAACGGGAATACTTTATGAAGCAGGTAGAAGAGGATCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGTTCCTTCCTCTTCGCTaGGGATGCATTGGCGTCCTT +
Preference number: 2 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMFLPLR*GCIGVL
Trigger: AAGGACGCCAATGCATCCTCAGCGAAGAGGAAGGAA...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACGAATGGCCATCCTGTTaGAGGCTTCCCCTAAGGAAA +
Preference number: 2 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYEWPSC*RLPLRK
Trigger: TTTCCTTAGGGGAAGCCTGCAACAGGATGGCCATTC...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGCACCTTTGTGGGCCCTaGAGAACCTCCTTTTCTAGC +
Preference number: 2 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMHLCGP*RTSFSS
Trigger: GCTAGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTG...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCTCTAAAGGGCCAAGGTaGAGAACTGCATGGAGTTCC +
Preference number: 2 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSSKGPR*RTAWSS
Trigger: GGAACTCCATGCAGTTCTCCACCTTGGCCCTTTAGA...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCGGTCCTAAGTTCCCTTaGTGTTTCTGGTTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSGPKFP*CFWFGG
Trigger: TCCCCCAAACCAGAAACACCAAGGGAACTTAGGACC...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAAGGAGGATCTGAGGGTTaGCAGGCCTTAGGTTGGCCT +
Preference number: 2 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEGGSEG*QALGWP
Trigger: AGGCCAACCTAAGGCCTGCCAACCCTCAGATCCTCC...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACCCTCAGGTAGAAGTGTaGTATAACTCCCTCCCCTTG +
Preference number: 2 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYPQVEV*YNSLPL
Trigger: CAAGGGGAGGGAGTTATACCACACTTCTACCTGAGG...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 90 bp ACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTaGAACTCCAGTGTTAGGCGAGATGCACCAATACTCTGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: TSIYVTGYPPDQHAL*NSSVRRDAPILWVG
Trigger: GCCCACCCAGAGTATTGGTGCATCTCGCCTAACACTGGAGTTCAACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCTTGGTTTTCTCCTTGTaGGAGAAGAGCATGCATCGG +
Preference number: 2 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSLVFSL*EKSMHR
Trigger: CCGATGCATGCTCTTCTCTCACAAGGAGAAAACCAA...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGACAGCACCTACTGTGTaGGTTACAAATGTTAGAGTC +
Preference number: 2 (lower is better)
Translates to: QALIARRESSGQLQGRRLTAPTV*VTNVRV
Trigger: GACTCTAACATTTGTAACTCACACAGTAGGTGCTGT...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAAATTAGTCTTGCTGTCTaGCAGAGGCCTGCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEISLAV*QRPAAC
Trigger: GCAGGCAGCAGGCCTCTGTCAGACAGCAAGACTAAT...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCACTTTGGTTTGGGGCTaGCCATGGTTCATGAAAGCT +
Preference number: 2 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSTLVWG*PWFMKA
Trigger: AGCTTTCATGAACCATGGTCAGCCCCAAACCAAAGT...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTATTCTTAGCTGCCCCTaGGCACACAGGGAGAGGACA +
Preference number: 2 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCILSCP*AHRERT
Trigger: TGTCCTCTCCCTGTGTGCTCAGGGGCAGCTAAGAAT...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACCTTGAAATGGTCTTGTaGAGCTCACCCAGGAAGCTT +
Preference number: 2 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYLEMVL*SSPRKL
Trigger: AAGCTTCCTGGGTGAGCTTCACAAGACCATTTCAAG...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTTGTGAGAGAAGAGCATaGATCGGAGGGGATGGCAGC +
Preference number: 2 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCCERRA*IGGDGS
Trigger: GCTGCCATCCCCTCCGATGCATGCTCTTCTCTCACA...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAACTTCATGGTACAGGCTaGTGGGCTATGGCTTTTCTC +
Preference number: 2 (lower is better)
Translates to: HCGHSPATNTEFLLCLLELHGTG*WAMAFL
Trigger: GAGAAAAGCCATAGCCCAGCAGCCTGTACCATGAAG...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCCAGAGGCCTGCTGCCTaGCTCCAGCCCACTGTGGTC +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIQRPAA*LQPTVV
Trigger: GACCACAGTGGGCTGGAGGCAGGCAGCAGGCCTCTG...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGTTTCAGAACTGCTGCTaGTGCTGCGGTGTCAGCCCA +
Preference number: 2 (lower is better)
Translates to: HLDLTISGCANMQQNKDSFQNCC*CCGVSP
Trigger: TGGGCTGACACCGCAGCAGCAGCAGCAGTTCTGAAA...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGGGCTTCTGCTTGTCATaGCCCCTCTTCTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: HLDLTISGCANMQQNKDSGFCLS*PLFSSL
Trigger: GAGAGAGGAGAAGAGGGGGCATGACAAGCAGAAGCC...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGACTGGCTTCCCAATTTaGTCTTGGTTTTCTCCTTGT +
Preference number: 2 (lower is better)
Translates to: QALIARRESSGQLQGRRLTGFPI*SWFSPC
Trigger: ACAAGGAGAAAACCAAGACCAAATTGGGAAGCCAGT...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACCCCTCATTAAGATGCTaGAAAGTCTTCCCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYPSLRC*KVFPAA
Trigger: AGCAGCTGGGAAGACTTTCCAGCATCTTAATGAGGG...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAACTACAGGCACCTTTGTaGGCCCTGGAGAACCTCCTT +
Preference number: 2 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIELQAPL*ALENLL
Trigger: AAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAG...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATGTGGCTGAACCCTTCTaGGGTTGGGGCCCTTGCTAT +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNVAEPF*GWGPCY
Trigger: ATAGCAAGGGCCCCAACCCCAGAAGGGTTCAGCCAC...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTGATGGAACCCAGGCCTaGCCCAGGGAATATTCAGAG +
Preference number: 2 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCDGTQA*PREYSE
Trigger: CTCTGAATATTCCCTGGGCCAGGCCTGGGTTCCATC...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAGGTCCTAAGTTCCCTTaGTGTTTCTGGTTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLGPKFP*CFWFGG
Trigger: TCCCCCAAACCAGAAACACCAAGGGAACTTAGGACC...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGATGAATGTGGCCACATaGATGAACTTGGCTTTTCAG +
Preference number: 2 (lower is better)
Translates to: QALIARRESSGQLQGRRLMNVAT*MNLAFQ
Trigger: CTGAAAAGCCAAGTTCATCCATGTGGCCACATTCAT...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATTACCACCTCCCTGCCTaGCTTCTGCTTGTCATGCCC +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNYHLPA*LLLVMP
Trigger: GGGCATGACAAGCAGAAGCCAGGCAGGGAGGTGGTA...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCTTCCTTCCTCTTCGCTaGGGATGCATTGGCGTCCTT +
Preference number: 2 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSFLPLR*GCIGVL
Trigger: AAGGACGCCAATGCATCCTCAGCGAAGAGGAAGGAA...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCAGCATCCAGTGCTCCTaGTTTAGCATGTGTCTCTTT +
Preference number: 2 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSSIQCS*FSMCLF
Trigger: AAAGAGACACATGCTAAATCAGGAGCACTGGATGCT...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGCCAGTTCTGTTTCTTTaGCCCTCACCTTCATGGTAC +
Preference number: 2 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMPVLFL*PSPSWY
Trigger: GTACCATGAAGGTGAGGGTCAAAGAAACAGAACTGG...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTACCAGTTCTGTTTCTTTaGCCCTCACCTTCATGGTAC +
Preference number: 2 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLPVLFL*PSPSWY
Trigger: GTACCATGAAGGTGAGGGTCAAAGAAACAGAACTGG...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTGGCATGTGTTTTTCCTaGCACACAGGGCACATTGGC +
Preference number: 2 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCGMCFS*HTGHIG
Trigger: GCCAATGTGCCCTGTGTGTCAGGAAAAACACATGCC...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACCAGGGTGTGCTAACATaGAGCAAAACAAAGACTCGA +
Preference number: 2 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYQGVLT*SKTKTR
Trigger: TCGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTG...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACGGCAGGAGCAGTTACTaGATCTCATACACTTGGATT +
Preference number: 2 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYGRSSY*ISYTWI
Trigger: AATCCAAGTGTATGAGATGCAGTAACTGCTCCTGCC...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCGGAGAAGGTATCAGCTaGTGCTGTTTGGGACAGACC +
Preference number: 2 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIGEGIS*CCLGQT
Trigger: GGTCTGTCCCAAACAGCAGCAGCTGATACCTTCTCC...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCTACTCTGGGGAGGGATaGAACCCAGGCCTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIYSGEG*NPGLAQ
Trigger: CTGGGCCAGGCCTGGGTTCCATCCCTCCCCAGAGTA...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATACCCATCCTTTACTCTaGGGAGGGATGGAACCCAGG +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNTHPLL*GGMEPR
Trigger: CCTGGGTTCCATCCCTCCCCAGAGTAAAGGATGGGT...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCTTAGGAATGACTCAGTaGCCCAAGGTTGTCTTCTAC +
Preference number: 2 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSLGMTQ*PKVVFY
Trigger: GTAGAAGACAACCTTGGGCCACTGAGTCATTCCTAA...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGGGGGTACTCTTCGTGTaGCCTCAGAGTGAAGGAAGA +
Preference number: 2 (lower is better)
Translates to: HLDLTISGCANMQQNKDSGVLFV*PQSEGR
Trigger: TCTTCCTTCACTCTGAGGCCACACGAAGAGTACCCC...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTAGGAGAGGCAGAATATaGGGAGACAAGGGTCCAAGG +
Preference number: 2 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCRRGRI*GDKGPR
Trigger: CCTTGGACCCTTGTCTCCCCATATTCTGCCTCTCCT...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR CAA 90 bp CCCACAATGTTGGCCTTTGAGGTTAGTACCAGTGCACCTTACCATTaGAAATTTATTCCTGACAAAACACCTCCTGTCCCCTACATGGGC +
Preference number: 2 (lower is better)
Translates to: PTMLAFEVSTSAPYH*KFIPDKTPPVPYMG
Trigger: GCCCATGTAGGGGACAGGAGGTGTTTTGTCAGGAATAAATTTCAAATGGTAAGGTGCACTGGTACTAACCTCAAAGGCCAACATTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTTCACCTGTTATGGGATaGCTTTGGTTTGGGGCTGAC +
Preference number: 2 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCSPVMG*LWFGAD
Trigger: GTCAGCCCCAAACCAAAGTCATCCCATAACAGGTGA...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGCAGGGCACATTGGCTTaGACCTCCTATCCCTTTGAA +
Preference number: 2 (lower is better)
Translates to: HLDLTISGCANMQQNKDSQGTLA*TSYPFE
Trigger: TTCAAAGGGATAGGAGGTTCAAGCCAATGTGCCCTG...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTCGTGTGGCCTCAGAGTaGAGGAAGAGAAATGTTCAG +
Preference number: 2 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCRVASE*RKRNVQ
Trigger: CTGAACATTTCTCTTCCTTCACTCTGAGGCCACACG...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTAGGAAAGGGAGATGCTaGCTAAAGGCTGGGATATGG +
Preference number: 2 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCRKGRC*LKAGIW
Trigger: CCATATCCCAGCCTTTAGTCAGCATCTCCCTTTCCT...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCTATCAGGAGACAATCTaGTTCCCTCCCACTGTCCAC +
Preference number: 2 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIYQETI*FPPTVH
Trigger: GTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATA...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAAGCAGGACTATGGCAGTaGCCATGTTGCAAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEAGLWQ*PCCKGK
Trigger: TTTCCCTTTGCAACATGGGCACTGCCATAGTCCTGC...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGCTTCATGGTACAGGCTaGTGGGCTATGGCTTTTCTC +
Preference number: 2 (lower is better)
Translates to: HLDLTISGCANMQQNKDSLHGTG*WAMAFL
Trigger: GAGAAAAGCCATAGCCCAGCAGCCTGTACCATGAAG...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGGAATGGCCATCCTGTTaGAGGCTTCCCCTAAGGAAA +
Preference number: 2 (lower is better)
Translates to: HLDLTISGCANMQQNKDSEWPSC*RLPLRK
Trigger: TTTCCTTAGGGGAAGCCTGCAACAGGATGGCCATTC...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATGTCATACCACCTCCCTaGCTGGCTTCTGCTTGTCAT +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNVIPPP*LASACH
Trigger: ATGACAAGCAGAAGCCAGGCAGGGAGGTGGTATGAC...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATGGAGAAGGTATCAGCTaGTGCTGTTTGGGACAGACC +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNGEGIS*CCLGQT
Trigger: GGTCTGTCCCAAACAGCAGCAGCTGATACCTTCTCC...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAAGGAGTTCCTATACTGTaGCTGAACCCTTCTGGGGTT +
Preference number: 2 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEGVPIL*LNPSGV
Trigger: AACCCCAGAAGGGTTCAGCCACAGTATAGGAACTCC...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATGATCCCCAGGCCCCTTaGGAACATTCCCATTTCAGT +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNDPQAP*EHSHFS
Trigger: ACTGAAATGGGAATGTTCCCAAGGGGCCTGGGGATC...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGATAGCAGCAGCACTTTaGCATGGAATGAGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: HLDLTISGCANMQQNKDSIAAAL*HGMRLS
Trigger: GCTCAGCCTCATTCCATGCCAAAGTGCTGCTGCTAT...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 90 bp TTTAAAGACAACTCATCTGAACTGCATCAGATTCCTCAGGGGTTCTaGTCTGGTGTTAATCATCACGCTGTGACTGGTCACCTACATGGG +
Preference number: 2 (lower is better)
Translates to: FKDNSSELHQIPQGF*SGVNHHAVTGHLHG
Trigger: CCCATGTAGGTGACCAGTCACAGCGTGATGATTAACACCAGACAAGAACCCCTGAGGAATCTGATGCAGTTCAGATGAGTTGTCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATCAGGGCACATTGGCTTaGACCTCCTATCCCTTTGAA +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNQGTLA*TSYPFE
Trigger: TTCAAAGGGATAGGAGGTTCAAGCCAATGTGCCCTG...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGATCTGGTCATTGTGCTaGCAGCCCACATTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: HLDLTISGCANMQQNKDSIWSLC*QPTFLQ
Trigger: TTGGAGAAATGTGGGCTGGCAGCACAATGACCAGAT...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACCTATGTACTGGAAGATaGAAAGAGAAACATGGGCTT +
Preference number: 2 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYLCTGR*KEKHGL
Trigger: AAGCCCATGTTTCTCTTTGCATCTTCCAGTACATAG...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCGTGGCTGAACCCTTCTaGGGTTGGGGCCCTTGCTAT +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIVAEPF*GWGPCY
Trigger: ATAGCAAGGGCCCCAACCCCAGAAGGGTTCAGCCAC...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATTTTGCTGGCTCAGAATaGCCATCCTGTTGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNFAGSE*PSCCRL
Trigger: AAGCCTGCAACAGGATGGCCATTCTGAGCCAGCAAA...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 90 bp AGATGCTTTCTAGACCCTTGGGGTAGGTTGGACCAATTTGTGAATTaGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACAC +
Preference number: 2 (lower is better)
Translates to: RCFLDPWGRLDQFVN*LFWCHVTSLGYTRH
Trigger: GTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAAATTCACAAATTGGTCCAACCTACCCCAAGGGTCTAGAAAGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCTTCCTTGACTTTGACTaGTTTGCTGGGCAAAGCAGT +
Preference number: 2 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIFLDFD*FAGQSS
Trigger: ACTGCTTTGCCCAGCAAATCAGTCAAAGTCAAGGAA...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTCCAAAGAGGAAGTGGTaGAACCATGCAATTCGAGTT +
Preference number: 2 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCPKRKW*NHAIRV
Trigger: AACTCGAATTGCATGGTTGCACCACTTCCTCTTTGG...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAATTCCCAATTTGGTCTTaGTTTTCTCCTTGTGAGAGA +
Preference number: 2 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEFPIWS*FSPCER
Trigger: TCTCTCACAAGGAGAAAACCAAGACCAAATTGGGAA...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCTGGCTTTTCTGGGCTTaGCTTAGCATTAGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIWLFWA*LSISLA
Trigger: AGCAAGACTAATGCTAAGCCAAGCCCAGAAAAGCCA...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCGATGGAACCCAGGCCTaGCCCAGGGAATATTCAGAG +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIDGTQA*PREYSE
Trigger: CTCTGAATATTCCCTGGGCCAGGCCTGGGTTCCATC...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCTACAAGGAAGGAGGTTaGCATTCAAGTTTATTAGGA +
Preference number: 2 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSYKEGG*HSSLLG
Trigger: TCCTAATAAACTTGAATGCCAACCTCCTTCCTTGTA...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACAGTCATGCTATGTACTaGAAGATGCAAAGAGAAACA +
Preference number: 2 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYSHAMY*KMQRET
Trigger: TGTTTCTCTTTGCATCTTCCAGTACATAGCATGACT...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATGTAGTGAGCCTCTATTaGGAACATAGACCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNVVSLY*EHRPVC
Trigger: GCACACAGGTCTATGTTCCCAATAGAGGCTCACTAC...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATCAGGGTGTGCTAACATaGAGCAAAACAAAGACTCGA +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNQGVLT*SKTKTR
Trigger: TCGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTG...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCTCAGAGAGGAAACACTaGAAAAGGCTACTTACTGGT +
Preference number: 2 (lower is better)
Translates to: GRALNFPLDPIPCSFSKISERKH*KRLLTG
Trigger: ACCAGTAAGTAGCCTTTTGCAGTGTTTCCTCTCTGA...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGTTGGTGTTTCTGGTTTaGGGGATTAGGAATGACTCA +
Preference number: 2 (lower is better)
Translates to: HLDLTISGCANMQQNKDSLVFLV*GIRNDS
Trigger: TGAGTCATTCCTAATCCCCCAAACCAGAAACACCAA...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATACAGCACCTACTGTGTaGGTTACAAATGTTAGAGTC +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNTAPTV*VTNVRV
Trigger: GACTCTAACATTTGTAACTCACACAGTAGGTGCTGT...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATTCCTCTCTCTTGTTTTaGGGTGATGAGGACCAAATA +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNSSLLF*GDEDQI
Trigger: TATTTGGTCCTCATCACCTCAAAACAAGAGAGAGGA...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCCGTGTGGCCTCAGAGTaGAGGAAGAGAAATGTTCAG +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIRVASE*RKRNVQ
Trigger: CTGAACATTTCTCTTCCTTCACTCTGAGGCCACACG...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCTCTCAGAAAAATCTCTaGGTATCAGGAGACAATCTG +
Preference number: 2 (lower is better)
Translates to: GRALNFPLDPIPCSFSKISQKNL*VSGDNL
Trigger: CAGATTGTCTCCTGATACGCAGAGATTTTTCTGAGA...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATACTGGCTTCCCAATTTaGTCTTGGTTTTCTCCTTGT +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNTGFPI*SWFSPC
Trigger: ACAAGGAGAAAACCAAGACCAAATTGGGAAGCCAGT...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCCAGCTTATAGAAAAGTaGGAAGGGGCAACGGAAGCC +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIQLIEK*EGATEA
Trigger: GGCTTCCGTTGCCCCTTCCCACTTTTCTATAAGCTG...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTCCATTGGTGGTTTTCTaGGTGAATTCTAAATCTTGG +
Preference number: 2 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCPLVVF*VNSKSW
Trigger: CCAAGATTTAGAATTCACCCAGAAAACCACCAATGG...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR CAA 90 bp AGAAGTTCCCAAGTCCTTGATATAGTGAGTGAAGGTTTTTCCAACTaGACTTGTGGAGGCACGTGCTTTATAATTATTAACTCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: RSSQVLDIVSEGFSN*TCGGTCFIIINSEP
Trigger: GGGCTCTGAGTTAATAATTATAAAGCACGTGCCTCCACAAGTCAAGTTGGAAAAACCTTCACTCACTATATCAAGGACTTGGGAACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAACACAGCTATAATACTTaGTATCTTTACAAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEHSYNT*YLYKAV
Trigger: CACAGCCTTGTAAAGATATCAAGTATTATAGCTGTG...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTGGAATTCATCTTTTCTaGTTAATGAAAACAGCGTGG +
Preference number: 2 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCGIHLF*LMKTAW
Trigger: CCACGCTGTTTTCATTAATCAGAAAAGATGAATTCC...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATTCCTTTTATGTTTGTTaGAAAACTGAGTCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNSFYVC*KTESAQ
Trigger: CTGGGCAGACTCAGTTTTCCAACAAACATAAAAGGA...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTATGCAAAGAGAAACATaGGCTTTGAGAAAGCAACTT +
Preference number: 2 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCMQRET*ALRKQL
Trigger: AAGTTGCTTTCTCAAAGCCCATGTTTCTCTTTGCAT...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCATAACTCCCTCCCCTTaGACCCTATCATTATGGCTC +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIITPSP*TLSLWL
Trigger: GAGCCATAATGATAGGGTCCAAGGGGAGGGAGTTAT...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 90 bp AAGAGTCATGCTATGTACTGGAAGATGCAAAGAGAAACATGGGCTTaGAGAAAGCAACTTCCCTTTAAAGAGAAAGATACAGGCTCTGAT +
Preference number: 2 (lower is better)
Translates to: KSHAMYWKMQRETWA*RKQLPFKEKDTGSD
Trigger: ATCAGAGCCTGTATCTTTCTCTTTAAAGGGAAGTTGCTTTCTCAAAGCCCATGTTTCTCTTTGCATCTTCCAGTACATAGCATGACTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 90 bp AACTTGAACTCTATTCAGAGATGCTTTCTAGACCCTTGGGGTAGGTaGGACCAATTTGTGAATTTGTTGTTTTGGTGTCATGTGACTTCT +
Preference number: 2 (lower is better)
Translates to: NLNSIQRCFLDPWGR*DQFVNLLFWCHVTS
Trigger: AGAAGTCACATGACACCAAAACAACAAATTCACAAATTGGTCCAACCTACCCCAAGGGTCTAGAAAGCATCTCTGAATAGAGTTCAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCAGCATCCAGTGCTCCTaGTTTAGCATGTGTCTCTTT +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKISIQCS*FSMCLF
Trigger: AAAGAGACACATGCTAAATCAGGAGCACTGGATGCT...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCCTTCCCTCATTAAGATaGTGGAAAGTCTTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKILPSLR*WKVFPA
Trigger: AGCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAG...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR GCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCGGCAGGAGCAGTTACTaGATCTCATACACTTGGATT +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIGRSSY*ISYTWI
Trigger: AATCCAAGTGTATGAGATGCAGTAACTGCTCCTGCC...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCGTAGTTGCTAATACCTaGCTTTTCTGGGCTTGGCTT +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIVVANT*LFWAWL
Trigger: AAGCCAAGCCCAGAAAAGCCAGGTATTAGCAACTAC...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCTGTTCCCTGTCCATTTaGAGAAGTGGCAGAGAACAT +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKICSLSI*RSGREH
Trigger: ATGTTCTCTGCCACTTCTCCAAATGGACAGGGAACA...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATATGCAAAGAGAAACATaGGCTTTGAGAAAGCAACTT +
Preference number: 2 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNMQRET*ALRKQL
Trigger: AAGTTGCTTTCTCAAAGCCCATGTTTCTCTTTGCAT...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCAAACAAAGACTCGACTaGAAGACCAAGGAGCACTAC +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIKQRLD*KTKEHY
Trigger: GTAGTGCTCCTTGGTCTTCCAGTCGAGTCTTTGTTT...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR TCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCACTATCCTTTGCAGGTaGATTCCATATCTGGTCATT +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKITILCR*IPYLVI
Trigger: AATGACCAGATATGGAATTCACCTGCAAAGGATAGT...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCTTCCCAATTTGGTCTTaGTTTTCTCCTTGTGAGAGA +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIFPIWS*FSPCER
Trigger: TCTCTCACAAGGAGAAAACCAAGACCAAATTGGGAA...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCTCCTTTTATGTTTGTTaGAAAACTGAGTCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: DPVIGITAVKVLSNLRKISFYVC*KTESAQ
Trigger: CTGGGCAGACTCAGTTTTCCAACAAACATAAAAGGA...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 90 bp CAGAATACTGTAGAACACAGATTTATCCTTCTTGGCTGTCCTAGATaGGGCCTGTTCCAAAATACTTGGATAATCAATCAAACAAAAACT +
Preference number: 2 (lower is better)
Translates to: QNTVEHRFILLGCPR*GLFQNTWIINQTKT
Trigger: AGTTTTTGTTTGATTGATTATCCAAGTATTTTGGAACAGGCCCAATCTAGGACAGCCAAGAAGGATAAATCTGTGTTCTACAGTATTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp ACAGGGAGAGGACAATGGAGGTGGAAGGGGAGGATCTaGGGGTTGGCAGGCCTTAGGTTGGCCTCGTTGGTC +
Preference number: 3 (lower is better)
Translates to: TGRGQWRWKGRI*GLAGLRLASLV
Trigger: GACCAACGAGGCCAACCTAAGGCCTGCCAACCCTCAGATCCTCCCCTTCCACCTCCATTGTCCTCTCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp TGGGCTATGGCTTTTCTCACCCAGACCAGCCCTTGCTaGTGTTGCCACAGCACCTTGGGCCCTTCTACTCCG +
Preference number: 3 (lower is better)
Translates to: WAMAFLTQTSPC*CCHSTLGPSTP
Trigger: CGGAGTAGAAGGGCCCAAGGTGCTGTGGCAACAGCAGCAAGGGCTGGTCTGGGTGAGAAAAGCCATAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp GCATGCCCAAACACAAGCGCAGTCATACCACCTCCCTaGCTGGCTTCTGCTTGTCATGCCCCCTCTTCTCCT +
Preference number: 3 (lower is better)
Translates to: ACPNTSAVIPPP*LASACHAPSSP
Trigger: AGGAGAAGAGGGGGCATGACAAGCAGAAGCCAGGCAGGGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp GAGGACAATGGAGGTGGAAGGGGAGGATCTGAGGGTTaGCAGGCCTTAGGTTGGCCTCGTTGGTCACCTGTT +
Preference number: 3 (lower is better)
Translates to: EDNGGGRGGSEG*QALGWPRWSPV
Trigger: AACAGGTGACCAACGAGGCCAACCTAAGGCCTGCCAACCCTCAGATCCTCCCCTTCCACCTCCATTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCAGCCCTTGCTGCTGTaGCCACAGCACCTTGGGCCC +
Preference number: 3 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSQPLLL*PQHLGP
Trigger: GGGCCCAAGGTGCTGTGGCAACAGCAGCAAGGGCTG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTCACCCAGACCAGCCCTaGCTGCTGTTGCCACAGCAC +
Preference number: 3 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSHPDQP*LLLPQH
Trigger: GTGCTGTGGCAACAGCAGCAAGGGCTGGTCTGGGTG...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp CCATCCTTTACTCTGGGGAGGGATGGAACCCAGGCCTaGCCCAGGGAATATTCAGAGATAGTGGGAGCCACA +
Preference number: 3 (lower is better)
Translates to: PSFTLGRDGTQA*PREYSEIVGAT
Trigger: TGTGGCTCCCACTATCTCTGAATATTCCCTGGGCCAGGCCTGGGTTCCATCCCTCCCCAGAGTAAAGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCTGTTGCCACAGCACCTaGGGCCCTTCTACTCCGGCC +
Preference number: 3 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSCCHST*GPSTPA
Trigger: GGCCGGAGTAGAAGGGCCCAAGGTGCTGTGGCAACA...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp GGTTGCCCCTGGGGGCAGCCAAAGTGCAAGAGCTGGTaGGGAGATTCTTCTCCTGCTATTTCAACTCTTCCC +
Preference number: 3 (lower is better)
Translates to: GCPWGQPKCKSW*GDSSPAISTLP
Trigger: GGGAAGAGTTGAAATAGCAGGAGAAGAATCTCCTCACCAGCTCTTGCACTTTGGCTGCCCCCAGGGGCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp TGGGTGGGCCAGCATTGGCTGCCATTCAATCACCTATaGCTACTGCAGGAGTGTCAGGCTGATACACCCCAG +
Preference number: 3 (lower is better)
Translates to: WVGQHWLPFNHL*LLQECQADTPQ
Trigger: CTGGGGTGTATCAGCCTGACACTCCTGCAGTAGTCATAGGTGATTGAATGGCAGCCAATGCTGGCCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR GCA 72 bp CACAAGCGCAGTCATACCACCTCCCTGCCTGGCTTCTaGTTGTCATGCCCCCTCTTCTCCTCTCTCTTGTTT +
Preference number: 3 (lower is better)
Translates to: HKRSHTTSLPGF*LSCPLFSSLLF
Trigger: AAACAAGAGAGAGGAGAAGAGGGGGCATGACAAGCAGAAGCCAGGCAGGGAGGTGGTATGACTGCGCTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp GCTGGGTGGGACAGGGAATCCTTCCCAAGGAATGGCTaGTTTGCCTCAGTAGCCTCAAGCCTTGGGGAAATT +
Preference number: 3 (lower is better)
Translates to: AGWDRESFPRNG*FASVASSLGEI
Trigger: AATTTCCCCAAGGCTTGAGGCTACTGAGGCAAAGCAGCCATTCCTTGGGAAGGATTCCCTGTCCCACCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp CAGGTCAGCCAGATCCTGCCGCAGCTTATAGAAAAGTaGGAAGGGGCAACGGAAGCCAAGCCACCTTCATGT +
Preference number: 3 (lower is better)
Translates to: QVSQILPQLIEK*EGATEAKPPSC
Trigger: ACATGAAGGTGGCTTGGCTTCCGTTGCCCCTTCCCACTTTTCTATAAGCTGCGGCAGGATCTGGCTGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp GGCCAAGGTGGAGAACTGCATGGAGTTCCTATACTGTaGCTGAACCCTTCTGGGGTTGGGGCCCTTGCTATT +
Preference number: 3 (lower is better)
Translates to: GQGGELHGVPIL*LNPSGVGALAI
Trigger: AATAGCAAGGGCCCCAACCCCAGAAGGGTTCAGCCACAGTATAGGAACTCCATGCAGTTCTCCACCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGCACTGGCTTCCCAATTaGGTCTTGGTTTTCTCCTTG +
Preference number: 3 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGHWLPN*VLVFSL
Trigger: CAAGGAGAAAACCAAGACCAAATTGGGAAGCCAGTG...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp ATTCAATCACCTATGACTACTGCAGGAGTGTCAGGCTaGTACACCCCAGTGGATGCTGCCCTTAAGGGGGCG +
Preference number: 3 (lower is better)
Translates to: IQSPMTTAGVSG*YTPVDAALKGA
Trigger: CGCCCCCTTAAGGGCAGCATCCACTGGGGTGTATCAGCCTGACACTCCTGCAGTAGTCATAGGTGATTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR GCA 72 bp GTGGCCACATGGATGAACTTGGCTTTTCAGAACTGCTaGTGCTGCTGCGGTGTCAGCCCAGGGTTAGAAAGA +
Preference number: 3 (lower is better)
Translates to: VATWMNLAFQNC*CCCGVSPGLER
Trigger: TCTTTCTAACCCTGGGCTGACACCGCAGCAGCAGCAGCAGTTCTGAAAAGCCAAGTTCATCCATGTGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp GGAGAAGGTATCAGCTGCTGCTGTTTGGGACAGACCTaGCTAGGGTGTTCTGGGTGGTTCAGAGAGGAAACA +
Preference number: 3 (lower is better)
Translates to: GEGISCCCLGQT*LGCSGWFREET
Trigger: TGTTTCCTCTCTGAACCACCCAGAACACCCTAGGCAGGTCTGTCCCAAACAGCAGCAGCTGATACCTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp GCCAGCATTGGCTGCCATTCAATCACCTATGACTACTaGAGGAGTGTCAGGCTGATACACCCCAGTGGATGC +
Preference number: 3 (lower is better)
Translates to: ASIGCHSITYDY*RSVRLIHPSGC
Trigger: GCATCCACTGGGGTGTATCAGCCTGACACTCCTGCAGTAGTCATAGGTGATTGAATGGCAGCCAATGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR CCA 72 bp TGTTTCTTTGACCCTCACCTTCATGGTACAGGCTGCTaGGCTATGGCTTTTCTCACCCAGACCAGCCCTTGC +
Preference number: 3 (lower is better)
Translates to: CFFDPHLHGTGC*AMAFLTQTSPC
Trigger: GCAAGGGCTGGTCTGGGTGAGAAAAGCCATAGCCCAGCAGCCTGTACCATGAAGGTGAGGGTCAAAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp GGTTGTCTTCTACCCATCCTTTACTCTGGGGAGGGATaGAACCCAGGCCTGGCCCAGGGAATATTCAGAGAT +
Preference number: 3 (lower is better)
Translates to: GCLLPILYSGEG*NPGLAQGIFRD
Trigger: ATCTCTGAATATTCCCTGGGCCAGGCCTGGGTTCCATCCCTCCCCAGAGTAAAGGATGGGTAGAAGACAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCCAGCCCTTGCTGCTGTaGCCACAGCACCTTGGGCCC +
Preference number: 3 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIQPLLL*PQHLGP
Trigger: GGGCCCAAGGTGCTGTGGCAACAGCAGCAAGGGCTG...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGGCTTAGCATTAGTCTaGCTGTCTGACAGAGGCCTG +
Preference number: 3 (lower is better)
Translates to: QALIARRESSGQLQGRRLGLALV*LSDRGL
Trigger: CAGGCCTCTGTCAGACAGCAAGACTAATGCTAAGCC...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp CACTGGCTTCCCAATTTGGTCTTGGTTTTCTCCTTGTaGGAGAAGAGCATGCATCGGAGGGGATGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: HWLPNLVLVFSL*EKSMHRRGWQP
Trigger: AGGCTGCCATCCCCTCCGATGCATGCTCTTCTCTCACAAGGAGAAAACCAAGACCAAATTGGGAAGCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp AGTACCTCAACTGACTCCCCAAACCCCAAACCAAGCTaGATGAGCTTCAGGCTCAAGGACTTCTCCTCACAG +
Preference number: 3 (lower is better)
Translates to: STSTDSPNPKPS*MSFRLKDFSSQ
Trigger: CTGTGAGGAGAAGTCCTTGAGCCTGAAGCTCATGCAGCTTGGTTTGGGGTTTGGGGAGTCAGTTGAGGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp TGGATGAACTTGGCTTTTCAGAACTGCTGCTGCTGCTaGGGTGTCAGCCCAGGGTTAGAAAGAATGGGACAG +
Preference number: 3 (lower is better)
Translates to: WMNLAFQNCCCC*GVSPGLERMGQ
Trigger: CTGTCCCATTCTTTCTAACCCTGGGCTGACACCGCAGCAGCAGCAGCAGTTCTGAAAAGCCAAGTTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp GCCACATGGATGAACTTGGCTTTTCAGAACTGCTGCTaGTGCTGCGGTGTCAGCCCAGGGTTAGAAAGAATG +
Preference number: 3 (lower is better)
Translates to: ATWMNLAFQNCC*CCGVSPGLERM
Trigger: CATTCTTTCTAACCCTGGGCTGACACCGCAGCAGCAGCAGCAGTTCTGAAAAGCCAAGTTCATCCATGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp AATGTGGCCACATGGATGAACTTGGCTTTTCAGAACTaGTGCTGCTGCTGCGGTGTCAGCCCAGGGTTAGAA +
Preference number: 3 (lower is better)
Translates to: NVATWMNLAFQN*CCCCGVSPGLE
Trigger: TTCTAACCCTGGGCTGACACCGCAGCAGCAGCAGCAGTTCTGAAAAGCCAAGTTCATCCATGTGGCCACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp GTGGGACAGGGAATCCTTCCCAAGGAATGGCTGCTTTaGCTCAGTAGCCTCAAGCCTTGGGGAAATTGTTTC +
Preference number: 3 (lower is better)
Translates to: VGQGILPKEWLL*LSSLKPWGNCF
Trigger: GAAACAATTTCCCCAAGGCTTGAGGCTACTGAGGCAAAGCAGCCATTCCTTGGGAAGGATTCCCTGTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp GAGATGCACCAATACTCTGGGTGGGCCAGCATTGGCTaGCATTCAATCACCTATGACTACTGCAGGAGTGTC +
Preference number: 3 (lower is better)
Translates to: EMHQYSGWASIG*HSITYDYCRSV
Trigger: GACACTCCTGCAGTAGTCATAGGTGATTGAATGGCAGCCAATGCTGGCCCACCCAGAGTATTGGTGCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR CCA 72 bp AGACCAAGGAGCACTACAGTTCACACAAAGAACCTGTaGTGGTGGGGGATGGACGTAGGTAGGAAAGGGAGA +
Preference number: 3 (lower is better)
Translates to: RPRSTTVHTKNL*WWGMDVGRKGR
Trigger: TCTCCCTTTCCTACCTACGTCCATCCCCCACCACCACAGGTTCTTTGTGTGAACTGTAGTGCTCCTTGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp ACTCCAGTGTTAGGCGAGATGCACCAATACTCTGGGTaGGCCAGCATTGGCTGCCATTCAATCACCTATGAC +
Preference number: 3 (lower is better)
Translates to: TPVLGEMHQYSG*ASIGCHSITYD
Trigger: GTCATAGGTGATTGAATGGCAGCCAATGCTGGCCCACCCAGAGTATTGGTGCATCTCGCCTAACACTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGTATAGCAGCAGCACTTaGGCATGGAATGAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: QALIARRESSGQLQGRRLYSSST*AWNEAE
Trigger: CTCAGCCTCATTCCATGCCAAAGTGCTGCTGCTATA...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp GCATGTGTTTTTCCTGACACACAGGGCACATTGGCTTaGACCTCCTATCCCTTTGAAGGCTGCTGTACCCTC +
Preference number: 3 (lower is better)
Translates to: ACVFPDTQGTLA*TSYPFEGCCTL
Trigger: GAGGGTACAGCAGCCTTCAAAGGGATAGGAGGTTCAAGCCAATGTGCCCTGTGTGTCAGGAAAAACACATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp ACATGGATGAACTTGGCTTTTCAGAACTGCTGCTGCTaGTGCGGTGTCAGCCCAGGGTTAGAAAGAATGGGA +
Preference number: 3 (lower is better)
Translates to: TWMNLAFQNCCC*CGVSPGLERMG
Trigger: TCCCATTCTTTCTAACCCTGGGCTGACACCGCAGCAGCAGCAGCAGTTCTGAAAAGCCAAGTTCATCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp TGCTTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTaGTTTGGGGGATTAGGAATGACTCAGTGGCCCAAG +
Preference number: 3 (lower is better)
Translates to: CLRKGPKFPWCF*FGGLGMTQWPK
Trigger: CTTGGGCCACTGAGTCATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp TGCTGTTTGGGACAGACCTGCCTAGGGTGTTCTGGGTaGTTCAGAGAGGAAACACTGCAAAAGGCTACTTAC +
Preference number: 3 (lower is better)
Translates to: CCLGQTCLGCSG*FREETLQKATY
Trigger: GTAAGTAGCCTTTTGCAGTGTTTCCTCTCTGAACCACCCAGAACACCCTAGGCAGGTCTGTCCCAAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp TTGAACTCCAGTGTTAGGCGAGATGCACCAATACTCTaGGTGGGCCAGCATTGGCTGCCATTCAATCACCTA +
Preference number: 3 (lower is better)
Translates to: LNSSVRRDAPIL*VGQHWLPFNHL
Trigger: TAGGTGATTGAATGGCAGCCAATGCTGGCCCACCCAGAGTATTGGTGCATCTCGCCTAACACTGGAGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTGGATCCCCAGGCCCCTaGGGAACATTCCCATTTCAG +
Preference number: 3 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCGSPGP*GTFPFQ
Trigger: CTGAAATGGGAATGTTCCCAAGGGGCCTGGGGATCC...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCGCCACATGGATGAACTaGGCTTTTCAGAACTGCTGC +
Preference number: 3 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSATWMN*AFQNCC
Trigger: GCAGCAGTTCTGAAAAGCCAAGTTCATCCATGTGGC...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCTGGGATGACTTTGGTTaGGGGCTGACCATGGTTCAT +
Preference number: 3 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSWDDFG*GLTMVH
Trigger: ATGAACCATGGTCAGCCCCAAACCAAAGTCATCCCA...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp TCCAGCCCACTGTGGTCACAGCCCTGCCACCAACACTaGGTTCCTTTTATGTTTGTTGGAAAACTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: SSPLWSQPCHQH*VPFMFVGKLSL
Trigger: CAGACTCAGTTTTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTGGGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp CCAGGCTTTCTCATCTGTAGAGAAGTCATTACGCAGTaGCCCCCTTGGATGTGTGTTCCCTGTCCATTTGGA +
Preference number: 3 (lower is better)
Translates to: PGFLICREVITQ*PPWMCVPCPFG
Trigger: TCCAAATGGACAGGGAACACACATCCAAGGGGGTCACTGCGTAATGACTTCTCTACAGATGAGAAAGCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp CACACAGGGCACATTGGCTTGAACCTCCTATCCCTTTaGAGGCTGCTGTACCCTCCTACAGATATGAAGGTA +
Preference number: 3 (lower is better)
Translates to: HTGHIGLNLLSL*RLLYPPTDMKV
Trigger: TACCTTCATATCTGTAGGAGGGTACAGCAGCCTTCAAAGGGATAGGAGGTTCAAGCCAATGTGCCCTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp AGAGGGTACCATTCCTTCATGGGCATGTGTTTTTCCTaGCACACAGGGCACATTGGCTTGAACCTCCTATCC +
Preference number: 3 (lower is better)
Translates to: RGYHSFMGMCFS*HTGHIGLNLLS
Trigger: GGATAGGAGGTTCAAGCCAATGTGCCCTGTGTGTCAGGAAAAACACATGCCCATGAAGGAATGGTACCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp CATGAAAAGCTGTCTGGAACCTTAAGAGAAAAGGCATaGCCAAACACAAGCGCAGTCATACCACCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: HEKLSGTLREKA*PNTSAVIPPPC
Trigger: GCAGGGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCAGACAGCTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp GCAGTGACCCCCTTGGATGTGTGTTCCCTGTCCATTTaGAGAAGTGGCAGAGAACATGTAGTTGCTAATACC +
Preference number: 3 (lower is better)
Translates to: AVTPLDVCSLSI*RSGREHVVANT
Trigger: GGTATTAGCAACTACATGTTCTCTGCCACTTCTCCAAATGGACAGGGAACACACATCCAAGGGGGTCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp CATGGGCATGTGTTTTTCCTGACACACAGGGCACATTaGCTTGAACCTCCTATCCCTTTGAAGGCTGCTGTA +
Preference number: 3 (lower is better)
Translates to: HGHVFFLTHRAH*LEPPIPLKAAV
Trigger: TACAGCAGCCTTCAAAGGGATAGGAGGTTCAAGCCAATGTGCCCTGTGTGTCAGGAAAAACACATGCCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp TGGAGCTTGGTGGTACTAGAGGGTACCATTCCTTCATaGGCATGTGTTTTTCCTGACACACAGGGCACATTG +
Preference number: 3 (lower is better)
Translates to: WSLVVLEGTIPS*ACVFPDTQGTL
Trigger: CAATGTGCCCTGTGTGTCAGGAAAAACACATGCCCATGAAGGAATGGTACCCTCTAGTACCACCAAGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAGTGTTCCCTGTCCATTaGGAGAAGTGGCAGAGAACA +
Preference number: 3 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLVFPVH*EKWQRT
Trigger: TGTTCTCTGCCACTTCTCCAAATGGACAGGGAACAC...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATGGATCCCCAGGCCCCTaGGGAACATTCCCATTTCAG +
Preference number: 3 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNGSPGP*GTFPFQ
Trigger: CTGAAATGGGAATGTTCCCAAGGGGCCTGGGGATCC...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACTTCCATATCTGGTCATaGTGCTGCCAGCCCACATTT +
Preference number: 3 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYFHIWS*CCQPTF
Trigger: AAATGTGGGCTGGCAGCACAATGACCAGATATGGAA...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp GTACATCTGTGTACTATGGGTGTAGCCTGTGACAGCTaGCAAAACACCCTAGCAGTCTTTGGCCAATGGAGA +
Preference number: 3 (lower is better)
Translates to: VHLCTMGVACDS*QNTLAVFGQWR
Trigger: TCTCCATTGGCCAAAGACTGCTAGGGTGTTTTGTCAGCTGTCACAGGCTACACCCATAGTACACAGATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp TGGTGTTTCTGGTTTGGGGGATTAGGAATGACTCAGTaGCCCAAGGTTGTCTTCTACCCATCCTTTACTCTG +
Preference number: 3 (lower is better)
Translates to: WCFWFGGLGMTQ*PKVVFYPSFTL
Trigger: CAGAGTAAAGGATGGGTAGAAGACAACCTTGGGCCACTGAGTCATTCCTAATCCCCCAAACCAGAAACACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACTCCAGTTCTGTTTCTTaGACCCTCACCTTCATGGTA +
Preference number: 3 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYSSSVS*TLTFMV
Trigger: TACCATGAAGGTGAGGGTCAAAGAAACAGAACTGGA...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGGCCACATGGATGAACTaGGCTTTTCAGAACTGCTGC +
Preference number: 3 (lower is better)
Translates to: HLDLTISGCANMQQNKDSATWMN*AFQNCC
Trigger: GCAGCAGTTCTGAAAAGCCAAGTTCATCCATGTGGC...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGTGGGATGACTTTGGTTaGGGGCTGACCATGGTTCAT +
Preference number: 3 (lower is better)
Translates to: HLDLTISGCANMQQNKDSWDDFG*GLTMVH
Trigger: ATGAACCATGGTCAGCCCCAAACCAAAGTCATCCCA...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATAGAATGGCCATCCTGTaGCAGGCTTCCCCTAAGGAA +
Preference number: 3 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNRMAIL*QASPKE
Trigger: TTCCTTAGGGGAAGCCTGCAACAGGATGGCCATTCT...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTTGGGTGGCAGCATTTTaGACAACCTTAGGCAGAGCA +
Preference number: 3 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCWVAAF*TTLGRA
Trigger: TGCTCTGCCTAAGGTTGTCAAAAATGCTGCCACCCA...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR TCA 72 bp TCATGTAGTACATCTGTGTACTATGGGTGTAGCCTGTaGCAGCTGACAAAACACCCTAGCAGTCTTTGGCCA +
Preference number: 3 (lower is better)
Translates to: SCSTSVYYGCSL*QLTKHPSSLWP
Trigger: TGGCCAAAGACTGCTAGGGTGTTTTGTCAGCTGTCACAGGCTACACCCATAGTACACAGATGTACTACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp TCTTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATaGTGGAAAGTCTTCCCAGCTGCTCAGGGCAATGAG +
Preference number: 3 (lower is better)
Translates to: SSPAISTLPSLR*WKVFPAAQGNE
Trigger: CTCATTGCCCTGAGCAGCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp TCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTaGAAAGTCTTCCCAGCTGCTCAGGGCAATGAGCTT +
Preference number: 3 (lower is better)
Translates to: SPAISTLPSLRC*KVFPAAQGNEL
Trigger: AAGCTCATTGCCCTGAGCAGCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGTTCCATATCTGGTCATaGTGCTGCCAGCCCACATTT +
Preference number: 3 (lower is better)
Translates to: HLDLTISGCANMQQNKDSFHIWS*CCQPTF
Trigger: AAATGTGGGCTGGCAGCACAATGACCAGATATGGAA...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp TGTGAGTGTGCATTTACTGATACTATCCTTTGCAGGTaGATTCCATATCTGGTCATTGTGCTGCCAGCCCAC +
Preference number: 3 (lower is better)
Translates to: CECAFTDTILCR*IPYLVIVLPAH
Trigger: GTGGGCTGGCAGCACAATGACCAGATATGGAATTCACCTGCAAAGGATAGTATCAGTAAATGCACACTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp CTGCTGTACCCTCCTACAGATATGAAGGTAGGGACATaGAAAGCTGTCTGGAACCTTAAGAGAAAAGGCATG +
Preference number: 3 (lower is better)
Translates to: LLYPPTDMKVGT*KAVWNLKRKGM
Trigger: CATGCCTTTTCTCTTAAGGTTCCAGACAGCTTTTCATGTCCCTACCTTCATATCTGTAGGAGGGTACAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp TGTGCACTCTTTTACAGTTCCCTTGAAATGGTCTTGTaGAGCTCACCCAGGAAGCTTCAGACAAGGCTTCAT +
Preference number: 3 (lower is better)
Translates to: CALFYSSLEMVL*SSPRKLQTRLH
Trigger: ATGAAGCCTTGTCTGAAGCTTCCTGGGTGAGCTTCACAAGACCATTTCAAGGGAACTGTAAAAGAGTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp TGGAGAAGTGGCAGAGAACATGTAGTTGCTAATACCTaGCTTTTCTGGGCTTGGCTTAGCATTAGTCTTGCT +
Preference number: 3 (lower is better)
Translates to: WRSGREHVVANT*LFWAWLSISLA
Trigger: AGCAAGACTAATGCTAAGCCAAGCCCAGAAAAGCCAGGTATTAGCAACTACATGTTCTCTGCCACTTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp CTCCTACACAAGAGTCCCAAAAGACTCTGCCTAGTCTaGAAGAGGATAAAGACTCGATCCACTGAACTTTCA +
Preference number: 3 (lower is better)
Translates to: LLHKSPKRLCLV*KRIKTRSTELS
Trigger: TGAAAGTTCAGTGGATCGAGTCTTTATCCTCTTCCAGACTAGGCAGAGTCTTTTGGGACTCTTGTGTAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp TTTGTGCACACAAAGAGGCCTATAGCAGCAGCACTTTaGCATGGAATGAGGCTGAGCAGAGAAAACCTTAAA +
Preference number: 3 (lower is better)
Translates to: FVHTKRPIAAAL*HGMRLSRENLK
Trigger: TTTAAGGTTTTCTCTGCTCAGCCTCATTCCATGCCAAAGTGCTGCTGCTATAGGCCTCTTTGTGTGCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp CAAGGCTTCATGAGAAGGAACCATTTCCTAACAGCATaGCAGGAGCAGTTACTGCATCTCATACACTTGGAT +
Preference number: 3 (lower is better)
Translates to: QGFMRRNHFLTA*QEQLLHLIHLD
Trigger: ATCCAAGTGTATGAGATGCAGTAACTGCTCCTGCCATGCTGTTAGGAAATGGTTCCTTCTCATGAAGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp TCTCCATTGGTGGTTTTCTGGGTGAATTCTAAATCTTaGACTCAGCCTGAGCATTCTAATGCCACCAAGAGG +
Preference number: 3 (lower is better)
Translates to: SPLVVFWVNSKS*TQPEHSNATKR
Trigger: CCTCTTGGTGGCATTAGAATGCTCAGGCTGAGTCCAAGATTTAGAATTCACCCAGAAAACCACCAATGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATCACTGGCTTCCCAATTaGGTCTTGGTTTTCTCCTTG +
Preference number: 3 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNHWLPN*VLVFSL
Trigger: CAAGGAGAAAACCAAGACCAAATTGGGAAGCCAGTG...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCATGGCAGTGCCCATGTaGCAAAGGGAAATAATCCAA +
Preference number: 3 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIMAVPM*QREIIQ
Trigger: TTGGATTATTTCCCTTTGCAACATGGGCACTGCCAT...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR TCA 72 bp GTGCCCTCTGCAGTATTGGCTTACTATATGAGTTTCTaGAGTCATAGATTCTTTGGGCTGCTTTTTGCCTCC +
Preference number: 3 (lower is better)
Translates to: VPSAVLAYYMSF*SHRFFGLLFAS
Trigger: GGAGGCAAAAAGCAGCCCAAAGAATCTATGACTTCAGAAACTCATATAGTAAGCCAATACTGCAGAGGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR CCA 72 bp GGCAGTGCCCATGTTGCAAAGGGAAATAATCCAAATTaGTGGGTTCGACTGTTTTTCCATCTGTCTTTTCCT +
Preference number: 3 (lower is better)
Translates to: GSAHVAKGNNPN*WVRLFFHLSFP
Trigger: AGGAAAAGACAGATGGAAAAACAGTCGAACCCACCAATTTGGATTATTTCCCTTTGCAACATGGGCACTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CCA 72 bp CCAAAGAGACCTAATCTCTCTGTAGTGAGCCTCTATTaGGAACATAGACCTGTGTGCACTCTTTTACAGTTC +
Preference number: 3 (lower is better)
Translates to: PKRPNLSVVSLY*EHRPVCTLLQF
Trigger: GAACTGTAAAAGAGTGCACACAGGTCTATGTTCCCAATAGAGGCTCACTACAGAGAGATTAGGTCTCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCGGCTTAGCATTAGTCTaGCTGTCTGACAGAGGCCTG +
Preference number: 3 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIGLALV*LSDRGL
Trigger: CAGGCCTCTGTCAGACAGCAAGACTAATGCTAAGCC...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGAGAGAAACATGGGCTTaGAGAAAGCAACTTCCCTTT +
Preference number: 3 (lower is better)
Translates to: HLDLTISGCANMQQNKDSRETWA*RKQLPF
Trigger: AAAGGGAAGTTGCTTTCTCAAAGCCCATGTTTCTCT...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp CCAATTATAGGGATGGTAGTGCTATATCTCTGCAATTaGCTTTCACAAACCACCATCCAACAGGTTTGCTGG +
Preference number: 3 (lower is better)
Translates to: PIIGMVVLYLCN*LSQTTIQQVCW
Trigger: CCAGCAAACCTGTTGGATGGTGGTTTGTGAAAGTCAATTGCAGAGATATAGCACTACCATCCCTATAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp AGGGTACTGTGCCCTCTGCAGTATTGGCTTACTATATaGGTTTCTGAAGTCATAGATTCTTTGGGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: RVLCPLQYWLTI*VSEVIDSLGCF
Trigger: AAAGCAGCCCAAAGAATCTATGACTTCAGAAACTCATATAGTAAGCCAATACTGCAGAGGGCACAGTACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR CCA 72 bp AGTGCCCATGTTGCAAAGGGAAATAATCCAAATTGGTaGGTTCGACTGTTTTTCCATCTGTCTTTTCCTTCC +
Preference number: 3 (lower is better)
Translates to: SAHVAKGNNPNW*VRLFFHLSFPS
Trigger: GGAAGGAAAAGACAGATGGAAAAACAGTCGAACCCACCAATTTGGATTATTTCCCTTTGCAACATGGGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAATCTTTTACAGTTCCCTaGAAATGGTCTTGTGAAGCT +
Preference number: 3 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIESFTVP*KWSCEA
Trigger: AGCTTCACAAGACCATTTCAAGGGAACTGTAAAAGA...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp AATGGAACTTTTAACTGTGTTATTGATGGAAGTGCTTaGGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGT +
Preference number: 3 (lower is better)
Translates to: NGTFNCVIDGSA*GRVLSSLGVSG
Trigger: ACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAAGCACTTCCATCAATAACACAGTTAAAAGTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp CGCTACGCCTATGTTTTTACTAAACCCACGGGGATCTaGTTAATGGCCTATAACTTCATATCAAAGGTAACT +
Preference number: 3 (lower is better)
Translates to: RYAYVFTKPTGI*LMAYNFISKVT
Trigger: AGTTACCTTTGATATGAAGTTATAGGCCATTAAGCAGATCCCCGTGGGTTTAGTAAAAACATAGGCGTAGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR CCA 72 bp GCAAGAAGACTTTCCACAAAGAGTCATGCTATGTACTaGAAGATGCAAAGAGAAACATGGGCTTTGAGAAAG +
Preference number: 3 (lower is better)
Translates to: ARRLSTKSHAMY*KMQRETWALRK
Trigger: CTTTCTCAAAGCCCATGTTTCTCTTTGCATCTTCCAGTACATAGCATGACTCTTTGTGGAAAGTCTTCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTGACCAATTTGTGAATTaGTTGTTTTGGTGTCATGTG +
Preference number: 3 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCDQFVN*LFWCHV
Trigger: CACATGACACCAAAACAACAAATTCACAAATTGGTC...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCATGGCAGTGCCCATGTaGCAAAGGGAAATAATCCAA +
Preference number: 3 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIMAVPM*QREIIQ
Trigger: TTGGATTATTTCCCTTTGCAACATGGGCACTGCCAT...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCTCCAGTTCTGTTTCTTaGACCCTCACCTTCATGGTA +
Preference number: 3 (lower is better)
Translates to: DPVIGITAVKVLSNLRKISSSVS*TLTFMV
Trigger: TACCATGAAGGTGAGGGTCAAAGAAACAGAACTGGA...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATCTTTTAACTGTGTTATaGATGGAAGTGCTTGAGGAA +
Preference number: 3 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNLLTVL*MEVLEE
Trigger: TTCCTCAAGCACTTCCATCAATAACACAGTTAAAAG...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp ACCTTAAAAACAACACAAGTCCTAGCATCCGTCTTATaGAACAATCACATACGTCCCTTAGGATCATGCTTG +
Preference number: 3 (lower is better)
Translates to: TLKTTQVLASVL*NNHIRPLGSCL
Trigger: CAAGCATGATCCTAAGGGACGTATGTGATTGTTTCATAAGACGGATGCTAGGACTTGTGTTGTTTTTAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp CTATGTGATCAGTTAATTGACCACAGCTATAATACTTaGTATCTTTACAAGGCTGTGTGTGCGCGTGTGCAT +
Preference number: 3 (lower is better)
Translates to: LCDQLIDHSYNT*YLYKAVCARVH
Trigger: ATGCACACGCGCACACACAGCCTTGTAAAGATATCAAGTATTATAGCTGTGGTCAATTAACTGATCACATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR TCA 72 bp TTGGATTGTTCACAAAACACCAGGATAGAAAAACACTaGTTAAAGTTCAACCTGCGGTCTAAATGTACGCCC +
Preference number: 3 (lower is better)
Translates to: LDCSQNTRIEKH*LKFNLRSKCTP
Trigger: GGGCGTACATTTAGACCGCAGGTTGAACTTTAATCAGTGTTTTTCTATCCTGGTGTTTTGTGAACAATCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR GCA 72 bp TCATCTCTGAGAACCAAAGAGGAAGTGGTGCAACCATaGAATTCGAGTTCAAACATGTCCTTTCAGAATATA +
Preference number: 3 (lower is better)
Translates to: SSLRTKEEVVQP*NSSSNMSFQNI
Trigger: TATATTCTGAAAGGACATGTTTGAACTCGAATTGCATGGTTGCACCACTTCCTCTTTGGTTCTCAGAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR CCA 72 bp ATATCCATACTGAAGGCACAGATGAGTTGTGAAGCCTaGATAGTACTCACTATAGCTTCCTATGATGTTCAT +
Preference number: 3 (lower is better)
Translates to: ISILKAQMSCEA*IVLTIASYDVH
Trigger: ATGAACATCATAGGAAGCTATAGTGAGTACTATCCAGGCTTCACAACTCATCTGTGCCTTCAGTATGGATAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR-3UTR CAA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCCTTTTAACTGTGTTATaGATGGAAGTGCTTGAGGAA +
Preference number: 3 (lower is better)
Translates to: DPVIGITAVKVLSNLRKILLTVL*MEVLEE
Trigger: TTCCTCAAGCACTTCCATCAATAACACAGTTAAAAG...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR GCA 72 bp CTCTCTTGTTTTGAGGTGATGAGGACCAAATATTTTTaGAGGGTAATGAGATATATGACTAAAGAATTCTGC +
Preference number: 3 (lower is better)
Translates to: LSCFEVMRTKYF*RVMRYMTKEFC
Trigger: GCAGAATTCTTTAGTCATATATCTCATTACCCTGCAAAAATATTTGGTCCTCATCACCTCAAAACAAGAGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGGCTCCCTCAGGTGGCTaGTGCGTGGCTCCCACATCG +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGAPSGG*CVAPTS
Trigger: CGATGTGGGAGCCACGCAGCAGCCACCTGAGGGAGC...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGGGGACGAGGCTTTGGTaGCACAGGTGGGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGGTRLW*HRWELA
Trigger: CGCCAGCTCCCACCTGTGCCACCAAAGCCTCGTCCC...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGCTCCGCTCCCTCAGGTaGCTGCTGCGTGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPELRSLR*LLRGSH
Trigger: GTGGGAGCCACGCAGCAGCCACCTGAGGGAGCGGAG...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGACGTGGGTGTTGAAGTaGGTTCCCGCAGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGTWVLK*VPAVAR
Trigger: CCTGGCCACTGCGGGAACCCACTTCAACACCCACGT...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR CAA 72 bp TATGGCTTTTCTCACCCAGACCAGCCCTTGCTGCTGTaGCCACAGCACCTTGGGCCCTTCTACTCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: YGFSHPDQPLLL*PQHLGPFYSGP
Trigger: AGGGCCGGAGTAGAAGGGCCCAAGGTGCTGTGGCAACAGCAGCAAGGGCTGGTCTGGGTGAGAAAAGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGCACACAGACATGTGGTaGCGGCGCCTCCGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLHTDMW*RRLRSL
Trigger: GAGGGAGCGGAGGCGCCGGCACCACATGTCTGTGTG...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGGCATCTGCCAGCTGTaGCGTAGGGGTGGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLGICQL*RRGGAE
Trigger: CTCTGCGCCACCCCTACGGCACAGCTGGCAGATGCC...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCGCCTGAGCCTGGCCTaGCAACGACCACCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSRLSLA*QRPPPP
Trigger: GGGAGGCGGTGGTCGTTGGCAGGCCAGGCTCAGGCG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGCCCCCAGCCTCCTGCTaGATTGGGTCACAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGPPASC*IGSQFP
Trigger: TGGAAACTGTGACCCAATCCAGCAGGAGGCTGGGGG...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGCTTTGGTGGCACAGGTaGGAGCTGGCGACGGCTTCG +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPELWWHR*ELATAS
Trigger: CGAAGCCGTCGCCAGCTCCCACCTGTGCCACCAAAG...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGGGACGAGGCTTTGGTaGCACAGGTGGGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLGTRLW*HRWELA
Trigger: CGCCAGCTCCCACCTGTGCCACCAAAGCCTCGTCCC...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGACCACATGCCTGAGCTaGCCCCACCCTGGGAGCGAA +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLTTCLS*PHPGSE
Trigger: TTCGCTCCCAGGGTGGGGTCAGCTCAGGCATGTGGT...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGCTCCTCGCCACAGTCTaGGGCGTGGGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPELLATV*GVGVFM
Trigger: CATGAAGACTCCCACGCCTCAGACTGTGGCGAGGAG...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGCACTCAGGAGGTCACTaGCAGCTCCACACATCATGC +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGHSGGH*QLHTSC
Trigger: GCATGATGTGTGGAGCTGTCAGTGACCTCCTGAGTG...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGTCTCGCTCAATCTGTTaGTGGCGCCGGAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGSRSIC*WRRSFM
Trigger: CATGAAGCTCCGGCGCCAGCAACAGATTGAGCGAGA...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGGCCAGGGTCTCTTTTTaGAGCTCCGAGTCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGARVSF*SSESSC
Trigger: GCAGCTAGACTCGGAGCTGCAAAAAGAGACCCTGGC...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGAGCAGAAGGCCAATCTaGAGAAGAGGCACCATGGCC +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGSRRPI*RRGTMA
Trigger: GGCCATGGTGCCTCTTCTGCAGATTGGCCTTCTGCT...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGCGCAGTGCTCATCGCTaGAGTCTCGGGTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPERSAHR*SLGSWP
Trigger: AGGCCATGACCCGAGACTCCAGCGATGAGCACTGCG...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGCTTCACTGGGTGACCTaGACTGGCGACGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPELHWVT*TGDVLG
Trigger: CCCCAGAACGTCGCCAGTCCAGGTCACCCAGTGAAG...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGACTTCCATCAGGAGGTaGAGAGATGCCGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGTSIRR*RDAASV
Trigger: CACACTGGCGGCATCTCTCCACCTCCTGATGGAAGT...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCGGCAGACCACATGCCTaGGCTGACCCCACCCTGGGA +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSGRPHA*ADPTLG
Trigger: TCCCAGGGTGGGGTCAGCTCAGGCATGTGGTCTGCC...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGTGCCGGCTTCGCCTCTaGCTCTGCCTGTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMCRLRL*LCLCLA
Trigger: GGCCAGGCACAGGCAGAGTCAGAGGCGAAGCCGGCA...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGTCTAGGCAGCCACGGTaGCTCCCGTTTGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLSRQPR*LPFAQG
Trigger: TCCTTGGGCAAACGGGAGCCACCGTGGCTGCCTAGA...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTTCCAGACTCCGCTCCTaGCTGGCAGACCTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSSRLRS*LADLLR
Trigger: CCGAAGCAGGTCTGCCAGCCAGGAGCGGAGTCTGGA...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGAGCTCAGGTTGGGGCTaGACTAGAGGTGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGSSGWG*TRGVSA
Trigger: AGCAGAAACACCTCTAGTCCAGCCCCAACCTGAGCT...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGAGCTATGGGGCACCATaGCTTTTCCAGTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGSYGAP*LFQSLA
Trigger: AGCGAGAGACTGGAAAAGCCATGGTGCCCCATAGCT...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGGGTGTGCCTGTTCTGTaGCATGTAGCGGGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPEGVPVL*HVAGER
Trigger: CCTCTCACCCGCTACATGCCACAGAACAGGCACACC...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTTGTGGGGAAGGATGCTaGCCCTGCTGGGGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSCGEGC*PCWGCK
Trigger: CTTGCACCCCCAGCAGGGCCAGCATCCTTCCCCACA...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGGGAGATGTAGTGCTGTaGGGAAGGATGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPEGDVVL*GRMLAL
Trigger: CAGGGCCAGCATCCTTCCCCACAGCACTACATCTCC...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTGAGCAGACATCGGGCTaGCCTCCTTGGCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSEQTSG*PPWPSA
Trigger: TGCAGAAGGCCAAGGAGGTCAGCCCGATGTCTGCTC...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGCTCCTGTGGCTGCTGTaGGGCTCATGTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLLLWLL*GSCSFS
Trigger: GGAGAAGGAACATGAGCCTCACAGCAGCCACAGGAG...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGCACCCTGGGAGCGAATaGCATTGTACATCACCTCAT +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGHPGSE*HCTSPH
Trigger: ATGAGGTGATGTACAATGGCATTCGCTCCCAGGGTG...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGAGACCTGCTTCGGGATaGAGAGGCAGAGTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLRPASG*RGRVLA
Trigger: GGCAAGGACTCTGCCTCTGCATCCCGAAGCAGGTCT...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGCGCTCAATCTGTTGCTaGCGCCGGAGCTTCATGAAC +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPERSICC*RRSFMN
Trigger: GTTCATGAAGCTCCGGCGCCAGCAACAGATTGAGCG...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTTGGAGTCTCGGGTCATaGCCTCCGTCCGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSWSLGS*PPSGSF
Trigger: AAAGGAGCCGGACGGAGGCCATGACCCGAGACTCCA...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTCGCAGTGCTCATCGCTaGAGTCTCGGGTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSRSAHR*SLGSWP
Trigger: AGGCCATGACCCGAGACTCCAGCGATGAGCACTGCG...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTTCTAGGCAGCCACGGTaGCTCCCGTTTGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSSRQPR*LPFAQG
Trigger: TCCTTGGGCAAACGGGAGCCACCGTGGCTGCCTAGA...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTGCGGTTGCTGCGACTTaGGCCTCTGTCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSAVAAT*ASVLLC
Trigger: ACAGAGGAGGACAGAGGCCCAAGTCGCAGCAACCGC...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACCTGGGTGACCTGGACTaGCGACGTTCTGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYLGDLD*RRSGDS
Trigger: GGAGTCCCCAGAACGTCGCCAGTCCAGGTCACCCAG...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 72 bp ATACCTGGCTTTTCTGGGCTTGGCTTAGCATTAGTCTaGCTGTCTGACAGAGGCCTGCTGCCTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IPGFSGLGLALV*LSDRGLLPASS
Trigger: GCTGGAGGCAGGCAGCAGGCCTCTGTCAGACAGCAAGACTAATGCTAAGCCAAGCCCAGAAAAGCCAGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCGGCGCCGGAGCTTCATaGACGCTCTTCGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSGAGAS*TLFGSP
Trigger: TGGAGAACCGAAGAGCGTTCATGAAGCTCCGGCGCC...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAACCACATGCCTGAGCTaGCCCCACCCTGGGAGCGAA +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLETTCLS*PHPGSE
Trigger: TTCGCTCCCAGGGTGGGGTCAGCTCAGGCATGTGGT...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAATGCCGGCTTCGCCTCTaGCTCTGCCTGTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIECRLRL*LCLCLA
Trigger: GGCCAGGCACAGGCAGAGTCAGAGGCGAAGCCGGCA...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGATGGCGGCCAATCGATaGGCTTCTTGGCGTATTTCC +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPEMAANR*ASWRIS
Trigger: GGAAATACGCCAAGAAGCTCATCGATTGGCCGCCAT...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAACGGTGGCTCCCGTTTaGCCAAGGACAAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLTVAPV*PRTRGS
Trigger: GGAGCCCCTTGTCCTTGGGCAAACGGGAGCCACCGT...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGGCGAAGTCGATGCATaGCCGCTCATTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLGEVDA*PLILLQ
Trigger: CTGGAGAAGAATGAGCGGGCATGCATCGACTTCGCC...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGGGGGAGACTACAAAGTaGCACACACGGTACTGGAAG +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPEGETTK*HTRYWK
Trigger: CTTCCAGTACCGTGTGTGGCACTTTGTAGTCTCCCC...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGTGATGAGGGCTCCATaGGCTGGAACATGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLVMRAP*AGTWVH
Trigger: ATGCACCCATGTTCCAGCGCATGGAGCCCTCATCAC...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTATCGGCCTCTCTCCCTaGCTCCTGATCGGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSIGLSP*LLIGEC
Trigger: ACACTCACCGATCAGGAGGCAGGGAGAGAGGCCGAT...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGTCCTCAGGAAGATGCTaGTCCAGGGCCAAGACGATG +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLSSGRC*SRAKTM
Trigger: CATCGTCTTGGCCCTGGAGCAGCATCTTCCTGAGGA...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGTCATCCTCAGGAAGATaGTGCTCCAGGGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLSSSGR*CSRAKT
Trigger: CGTCTTGGCCCTGGAGCAGCATCTTCCTGAGGATGA...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGGACTTCAGCACGATCTaGAGGCTAGGTATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGDFSTI*RLGIPD
Trigger: ATCAGGAATACCTAGCCTGCAGATCGTGCTGAAGTC...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGACAGCCAGTTCCAGGTaGCTCCTAAGGCATCATTGG +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPETASSR*LLRHHW
Trigger: CCAATGATGCCTTAGGAGCCACCTGGAACTGGCTGT...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGTCCCACATCGACATGTaGTGTCTTCTCCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGSHIDM*CLLLLS
Trigger: AGACAGAAGGAGAAGACACCACATGTCGATGTGGGA...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCAGGTGGCTGCTGCGTaGCTCCCACATCGACATGTG +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSQVAAA*LPHRHV
Trigger: CACATGTCGATGTGGGAGCCACGCAGCAGCCACCTG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGGACTCCGCTCCTGGCTaGCAGACCTGCTTCGGGATG +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMDSAPG*QTCFGM
Trigger: CATCCCGAAGCAGGTCTGCCAGCCAGGAGCGGAGTC...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCGCGGTTGCTGCGACTTaGGCCTCTGTCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSAVAAT*ASVLLC
Trigger: ACAGAGGAGGACAGAGGCCCAAGTCGCAGCAACCGC...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTGGTGTGCCTGTTCTGTaGCATGTAGCGGGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSGVPVL*HVAGER
Trigger: CCTCTCACCCGCTACATGCCACAGAACAGGCACACC...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGGAGGGCTCCATGCGCTaGAACATGGGTGCATTTTTC +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPEEGSMR*NMGAFF
Trigger: GAAAAATGCACCCATGTTCCAGCGCATGGAGCCCTC...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACGACTCCCAGTCGGCCTaGGTCCCTCGCTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYDSQSA*VPRSSE
Trigger: TTCTGAAGAGCGAGGGACCCAGGCCGACTGGGAGTC...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTACTGGGTGACCTGGACTaGCGACGTTCTGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLLGDLD*RRSGDS
Trigger: GGAGTCCCCAGAACGTCGCCAGTCCAGGTCACCCAG...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTGTGACCTTCCTTCACTaGGTGACCTGGACTGGCGAC +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSVTFLH*VTWTGD
Trigger: GTCGCCAGTCCAGGTCACCCAGTGAAGGAAGGTCAC...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCCACAGTCTGAGGCGTaGGAGTCTTCATGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSPQSEA*ESSWRA
Trigger: GGCCCTCCATGAAGACTCCCACGCCTCAGACTGTGG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTTGTCGGTTCCTGCTCTaGTCCGAGTCTCCATCGCCT +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSCRFLL*SESPSP
Trigger: AGGCGATGGAGACTCGGACCAGAGCAGGAACCGACA...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR CAA 72 bp TCTTTGGCCAATGGAGAAGGTATCAGCTGCTGCTGTTaGGGACAGACCTGCCTAGGGTGTTCTGGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SLANGEGISCCC*GQTCLGCSGWF
Trigger: GAACCACCCAGAACACCCTAGGCAGGTCTGTCCCAAACAGCAGCAGCTGATACCTTCTCCATTGGCCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCCGTCCGGCTCCTTTTaGTGGTTGCCCTTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSPSGSF*WLPFEA
Trigger: TGCTTCGAAGGGCAACCATCAAAAGGAGCCGGACGG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAACCTTGCCCTCAGTCCTaGCTCGGCGATGCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEPCPQS*LGDAGF
Trigger: GAAGCCGGCATCGCCGAGTCAGGACTGAGGGCAAGG...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGCCTTGCCCTCAGTCCTaGCTCGGCGATGCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSPCPQS*LGDAGF
Trigger: GAAGCCGGCATCGCCGAGTCAGGACTGAGGGCAAGG...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACCTCCTGTGGCTGCTGTaGGGCTCATGTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYLLWLL*GSCSFS
Trigger: GGAGAAGGAACATGAGCCTCACAGCAGCCACAGGAG...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGCAGGGATGGCGACCGTaGCACTGGTGCTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSQGWRP*HWCSPW
Trigger: CCACGGAGAGCACCAGTGTCACGGTCGCCATCCCTG...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACGCTTGGGCAAGCGCTTaGTGGTTTTCAGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYAWASA*WFSVAA
Trigger: TGCGGCCACTGAAAACCATCAAGCGCTTGCCCAAGC...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGTTTCCTTTGAATAGCTaGACAGCGATGACGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGFPLNS*TAMTAK
Trigger: CTTTGCCGTCATCGCTGTTCAGCTATTCAAAGGAAA...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTGGAGAGTGGACTCATTaGAGGGTATCCACTCCGACC +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSGEWTH*RVSTPT
Trigger: GGTCGGAGTGGATACCCTTCAATGAGTCCACTCTCC...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATTCAGGCGGTGTGCTaGCAGCCTCAGGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYIQAVC*QPQGGM
Trigger: CATTCCTCCCTGAGGCTGTCAGCACACCGCCTGAAT...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTTCTCTCCCTGCCTCCTaGTCGGTGAGTGTCAGACTT +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSSLPAS*SVSVRL
Trigger: AAGTCTGACACTCACCGATCAGGAGGCAGGGAGAGA...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGCTCCTCGCCACAGTCTaGGGCGTGGGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMLLATV*GVGVFM
Trigger: CATGAAGACTCCCACGCCTCAGACTGTGGCGAGGAG...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTCGCCCTCTGCGCTTTTaGCTGCTTGTAGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCRPLRF*LLVGGR
Trigger: GCGGCCGCCTACAAGCAGTCAAAAGCGCAGAGGGCG...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGGCCATTACGGAGGTATaGACCCTTATGGAAGATGAA +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGAITEV*TLMEDE
Trigger: TTCATCTTCCATAAGGGTTCATACCTCCGTAATGGC...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACTGCACACCACACGGGTaGGGAGGATCAAACCCCTCT +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYCTPHG*GGSNPS
Trigger: AGAGGGGTTTGATCCTCCTCACCCGTGTGGTGTGCA...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTTGTTGTCAAACTGGGTaGTCCCGTCATTGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSCCQTG*SRHWGR
Trigger: TCGGCCCCAATGACGGGATCACCCAGTTTGACAACA...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGGCTTCTTCTTCCTCCTaGTCATCCTTGGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPEASSSS*SSLVSS
Trigger: GGAACTGACCAAGGATGAGCAGGAGGAAGAAGAAGC...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCGCTCCCTCAGGTGGCTaGTGCGTGGCTCCCACATCG +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSAPSGG*CVAPTS
Trigger: CGATGTGGGAGCCACGCAGCAGCCACCTGAGGGAGC...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCCTCCCCCAGCCTCCTaGTGGATTGGGTCACAGTTT +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSPPPAS*WIGSQF
Trigger: AAACTGTGACCCAATCCAGCAGGAGGCTGGGGGAGG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGTTCCTCTTTAGTCTCTaGCTCCTTCAAGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPEFLFSL*LLQGTG
Trigger: GCCAGTCCCTTGAAGGAGGCAGAGACTAAAGAGGAA...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCTCTCCATGCGGTTGCTaGGACTTGGGCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSSPCGC*DLGLCP
Trigger: AGGACAGAGGCCCAAGTCGCAGCAACCGCATGGAGA...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTGGCGAAGTCGATGCATaGCCGCTCATTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSGEVDA*PLILLQ
Trigger: CTGGAGAAGAATGAGCGGGCATGCATCGACTTCGCC...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGTGGAGGGACATCTCTTaGCGAGGCCTAGCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMWRDIS*RGLAVV
Trigger: CACCACCGCTAGGCCTCGGCAAGAGATGTCCCTCCA...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTTCAGGCAAGCGCTGTTaGTCTCCAGAGCTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSSGKRC*SPELER
Trigger: CCTCTCAAGCTCTGGAGAGCAACAGCGCTTGCCTGA...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGGTTCGCCAGAGCAAATaGTACCAATGCACCAACCAC +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPEVRQSK*YQCTNH
Trigger: GTGGTTGGTGCATTGGTAGCATTTGCTCTGGCGAAC...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTATGGAGTCTCGGGTCATaGCCTCCGTCCGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLWSLGS*PPSGSF
Trigger: AAAGGAGCCGGACGGAGGCCATGACCCGAGACTCCA...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACGAGCTGACCCCACCCTaGGAGCGAATGCCATTGTAC +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYELTPP*ERMPLY
Trigger: GTACAATGGCATTCGCTCCCAGGGTGGGGTCAGCTC...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGTTCTGTCTCTTTCAATaGAAGGCATGTTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGFCLFQ*KACWEQ
Trigger: CTGCTCCCAACATGCCTTCCATTGAAAGAGACAGAA...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTACAGGTGGCTGCTGCGTaGCTCCCACATCGACATGTG +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLQVAAA*LPHRHV
Trigger: CACATGTCGATGTGGGAGCCACGCAGCAGCCACCTG...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGTCCCACACAGACATGTaGTGCCGGCGCCTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSSHTDM*CRRLRS
Trigger: GGAGCGGAGGCGCCGGCACCACATGTCTGTGTGGGA...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGATGAACATAGAGCTATaGGGCACCATGGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGMNIEL*GTMAFP
Trigger: TGGAAAAGCCATGGTGCCCCATAGCTCTATGTTCAT...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGCATGTCCTCAGCCACTaGCATGTTCATCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLHVLSH*HVHQDQ
Trigger: CTGGTCCTGATGAACATGCCAGTGGCTGAGGACATG...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTGGTGCTTTCGTTCTTTaGATCGGCCTCTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSGAFVL*IGLSPC
Trigger: GCAGGGAGAGAGGCCGATCCAAAGAACGAAAGCACC...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTACTTCACTGGGTGACCTaGACTGGCGACGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLLHWVT*TGDVLG
Trigger: CCCCAGAACGTCGCCAGTCCAGGTCACCCAGTGAAG...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAACCACAGTCTGAGGCGTaGGAGTCTTCATGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEPQSEA*ESSWRA
Trigger: GGCCCTCCATGAAGACTCCCACGCCTCAGACTGTGG...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGAGGATGTTGTCAAACTaGGTGATCCCGTCATTGGGG +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPERMLSN*VIPSLG
Trigger: CCCCAATGACGGGATCACCCAGTTTGACAACATCCT...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR CAA 72 bp CAGTGGATGCTGCCCTTAAGGGGGCGTCTCATGGGCTaGACTCACATGTTTGATAATGTGGGTGGCAGCATT +
Preference number: 4 (lower is better)
Translates to: QWMLPLRGRLMG*THMFDNVGGSI
Trigger: AATGCTGCCACCCACATTATCAAACATGTGAGTCAAGCCCATGAGACGCCCCCTTAAGGGCAGCATCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATGGCAGACCACATGCCTaGGCTGACCCCACCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNGRPHA*ADPTLG
Trigger: TCCCAGGGTGGGGTCAGCTCAGGCATGTGGTCTGCC...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATCAGGGATGGCGACCGTaGCACTGGTGCTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNQGWRP*HWCSPW
Trigger: CCACGGAGAGCACCAGTGTCACGGTCGCCATCCCTG...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGGAGCCACGAAGATATTaGCAAAGAAGAAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGEPRRY*QRRKGR
Trigger: TCTTCCCTTTCTTCTTTGTCAATATCTTCGTGGCTC...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACGGAGAGTGGACTCATTaGAGGGTATCCACTCCGACC +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYGEWTH*RVSTPT
Trigger: GGTCGGAGTGGATACCCTTCAATGAGTCCACTCTCC...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACTCTCGCTCAATCTGTTaGTGGCGCCGGAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYSRSIC*WRRSFM
Trigger: CATGAAGCTCCGGCGCCAGCAACAGATTGAGCGAGA...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAAACGGTGGCTCCCGTTTaGCCAAGGACAAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIETVAPV*PRTRGS
Trigger: GGAGCCCCTTGTCCTTGGGCAAACGGGAGCCACCGT...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGCCTCCCCCAGCCTCCTaGTGGATTGGGTCACAGTTT +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMPPPAS*WIGSQF
Trigger: AAACTGTGACCCAATCCAGCAGGAGGCTGGGGGAGG...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTACTGCCTTCAGCCTCCTaGTCTGTCAGAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLLPSAS*SVRAAS
Trigger: GGATGCAGCTCTGACAGAGCAGGAGGCTGAAGGCAG...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAGGGCTTGTTCACTGCTaGCTTCAGCCTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLGLVHC*LQPPAL
Trigger: CAGAGCAGGAGGCTGAAGGCAGCAGTGAACAAGCCC...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGTTCCTCTTTAGTCTCTaGCTCCTTCAAGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLFLFSL*LLQGTG
Trigger: GCCAGTCCCTTGAAGGAGGCAGAGACTAAAGAGGAA...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTATCTCCATGCGGTTGCTaGGACTTGGGCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLSPCGC*DLGLCP
Trigger: AGGACAGAGGCCCAAGTCGCAGCAACCGCATGGAGA...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGAGGCGAGCTCATAGGTaGAAGGAGCAGAGTAGTACT +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLRRAHR*KEQSST
Trigger: AGTACTACTCTGCTCCTTGCACCTATGAGCTCGCCT...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTAGGTCCACAGTAAGATaGGGATGGTGTAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSRSTVR*GWCSPV
Trigger: GACAGGGCTACACCATCCGCATCTTACTGTGGACCT...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACAGCTCCGAGTCTAGCTaGTGTCTGTCTGCACCACCT +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYSSESS*CLSAPP
Trigger: AGGTGGTGCAGACAGACAGCAGCTAGACTCGGAGCT...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAATCGGCCTCTCTCCCTaGCTCCTGATCGGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEIGLSP*LLIGEC
Trigger: ACACTCACCGATCAGGAGGCAGGGAGAGAGGCCGAT...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACCCTCCTGCTCATCCTTaGTCAGTTCCTGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYPPAHP*SVPGHW
Trigger: CCAATGCCCAGGAACTGACCAAGGATGAGCAGGAGG...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATTCCCACACAGACATGTaGTGCCGGCGCCTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNSHTDM*CRRLRS
Trigger: GGAGCGGAGGCGCCGGCACCACATGTCTGTGTGGGA...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGGGCCCTCAATGGGCCTaGGCCTCCGATAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSGPQWA*ASDKGW
Trigger: CCAGCCTTTATCGGAGGCCCAGGCCCATTGAGGGCC...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTGGCCCTCAATGGGCCTaGGCCTCCGATAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCGPQWA*ASDKGW
Trigger: CCAGCCTTTATCGGAGGCCCAGGCCCATTGAGGGCC...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGAGCCTCCTGCTGGATTaGGTCACAGTTTCCATGACA +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLSLLLD*VTVSMT
Trigger: TGTCATGGAAACTGTGACCCAATCCAGCAGGAGGCT...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAACCCCCAGCCTCCTGCTaGATTGGGTCACAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEPPASC*IGSQFP
Trigger: TGGAAACTGTGACCCAATCCAGCAGGAGGCTGGGGG...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAGACTCTGCCTGTGCCTaGCCCGGTCCTCAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEDSACA*PGPQKS
Trigger: TGACTTTTGAGGACCGGGCCAGGCACAGGCAGAGTC...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGGACTCCGCTCCTGGCTaGCAGACCTGCTTCGGGATG +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSDSAPG*QTCFGM
Trigger: CATCCCGAAGCAGGTCTGCCAGCCAGGAGCGGAGTC...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGTCCAGACTCCGCTCCTaGCTGGCAGACCTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSSRLRS*LADLLR
Trigger: CCGAAGCAGGTCTGCCAGCCAGGAGCGGAGTCTGGA...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGGGTGAGGCCCCAGGATaGAGGAATCTCGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMGEAPG*RNLESG
Trigger: ACCTGACTCGAGATTCCTCCATCCTGGGGCCTCACC...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACCACTGCTGCGTTCCATaGAGAACTCCTCCAACCAGG +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYHCCVP*RTPPTR
Trigger: CCTGGTTGGAGGAGTTCTCCATGGAACGCAGCAGTG...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAGGGGGTGCAAGGAGTTaGAAGACTCGGTCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEGGARS*KTRSGK
Trigger: CTTGCCTGACCGAGTCTTCCAACTCCTTGCACCCCC...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAGGGGGTGCAAGGAGTTaGAAGACTCGGTCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLGGARS*KTRSGK
Trigger: CTTGCCTGACCGAGTCTTCCAACTCCTTGCACCCCC...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAGGAGATGTAGTGCTGTaGGGAAGGATGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLGDVVL*GRMLAL
Trigger: CAGGGCCAGCATCCTTCCCCACAGCACTACATCTCC...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCTCCCAGGACGAGGTTaGGAACAAAGAAGGATCCGA +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSLPGRG*EQRRIR
Trigger: TCGGATCCTTCTTTGTTCTCAACCTCGTCCTGGGAG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAAGTAGAGGAGGTGAGTaGGCCACTGTGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLSRGGE*ATVAGC
Trigger: ACAACCAGCCACAGTGGCTCACTCACCTCCTCTACT...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAAGTAGAGGAGGTGAGTaGGCCACTGTGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLESRGGE*ATVAGC
Trigger: ACAACCAGCCACAGTGGCTCACTCACCTCCTCTACT...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCGAGCAGACATCGGGCTaGCCTCCTTGGCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIEQTSG*PPWPSA
Trigger: TGCAGAAGGCCAAGGAGGTCAGCCCGATGTCTGCTC...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTACAGCCACGAACAGGTTaGGCATCAGGAAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLQPRTG*ASGRSR
Trigger: TCTGCTCCTTCCTGATGCTCAACCTGTTCGTGGCTG...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCTTAGCAATGATCTCCTaGGGCAGTGATGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSLAMIS*GSDEGS
Trigger: GGAGCCCTCATCACTGCCTCAGGAGATCATTGCTAA...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGCTAGAGCCACAATTTTaGTCCCAGCTTCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPELEPQF*SQLQSR
Trigger: TCTGCTTTGAAGCTGGGATCAAAATTGTGGCTCTAG...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCTGCCTCCAAAGAGCTaGATTCCCAGGAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSLPPKS*IPRRAK
Trigger: CTTTGCTCTCCTGGGAATGCAGCTCTTTGGAGGCAG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCTAGACATTTGCATGTaGCTCCTCAGCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSLDICM*LLSWLV
Trigger: CACCAGCCAGCTGAGGAGGCACATGCAAATGTCTAG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACCTAGACATTTGCATGTaGCTCCTCAGCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYLDICM*LLSWLV
Trigger: CACCAGCCAGCTGAGGAGGCACATGCAAATGTCTAG...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAACATCTCCATGCGGTTaGTGCGACTTGGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLTSPCG*CDLGLC
Trigger: ACAGAGGCCCAAGTCGCAGCAACCGCATGGAGATGT...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAAGATGGACATCTCCATaGGGTTGCTGCGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLERWTSP*GCCDLG
Trigger: GCCCAAGTCGCAGCAACCGCATGGAGATGTCCATCT...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCGATGCGGCCACATGCTaGTCTGTCATATTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSDAATC*SVIFCP
Trigger: TGGGCAGAATATGACAGAGCAGCATGTGGCCGCATC...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCTGGAGGGACATCTCTTaGCGAGGCCTAGCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSWRDIS*RGLAVV
Trigger: CACCACCGCTAGGCCTCGGCAAGAGATGTCCCTCCA...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGGCCAGGGTCTCTTTTTaGAGCTCCGAGTCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMARVSF*SSESSC
Trigger: GCAGCTAGACTCGGAGCTGCAAAAAGAGACCCTGGC...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTTTGCTGCATAGATCTTaGCCACAGTCAGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSLLHRS*PQSGQR
Trigger: CCTCTGACCTGACTGTGGGCAAGATCTATGCAGCAA...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGGTGATGAGGGCTCCATaGGCTGGAACATGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMVMRAP*AGTWVH
Trigger: ATGCACCCATGTTCCAGCGCATGGAGCCCTCATCAC...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTATCAGGCAAGCGCTGTTaGTCTCCAGAGCTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLSGKRC*SPELER
Trigger: CCTCTCAAGCTCTGGAGAGCAACAGCGCTTGCCTGA...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACTTCCTTGTCGGTTCCTaGTCTGGTCCGAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYFLVGS*SGPSLH
Trigger: ATGGAGACTCGGACCAGAGCAGGAACCGACAAGGAA...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGCTCTCTCTCTTTCTTTaGCAAATTCCCCGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPELSLFL*QIPRKA
Trigger: TGCTTTCCGGGGAATTTGCCAAAGAAAGAGAGAGAG...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAACCTCCTGCTCATCCTTaGTCAGTTCCTGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEPPAHP*SVPGHW
Trigger: CCAATGCCCAGGAACTGACCAAGGATGAGCAGGAGG...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCGACAAGGGGCTCCTCTaGTTGTCCAGGGCGCTAGTC +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSDKGLL*LSRALV
Trigger: GACTAGCGCCCTGGACAACCAGAGGAGCCCCTTGTC...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAAGACAAGGGGCTCCTCTaGTTGTCCAGGGCGCTAGTC +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEDKGLL*LSRALV
Trigger: GACTAGCGCCCTGGACAACCAGAGGAGCCCCTTGTC...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACACTTCCAGCTCAGGTTaGGGCTGGACTAGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYTSSSG*GWTRGV
Trigger: AACACCTCTAGTCCAGCCCCAACCTGAGCTGGAAGT...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCCTCCTTCAAGGGACTaGCTTCTCCATCCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSPPSRD*LLHPSC
Trigger: ACAAGACGGATGGAGAAGCCAGTCCCTTGAAGGAGG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCAGCTATGGGGCACCATaGCTTTTCCAGTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSSYGAP*LFQSLA
Trigger: AGCGAGAGACTGGAAAAGCCATGGTGCCCCATAGCT...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCGCCCTGAGGGTGCAGTaGTGTCAGGCTCACAACCCT +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSALRVQ*CQAHNP
Trigger: AGGGTTGTGAGCCTGACACCACTGCACCCTCAGGGC...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCATGTCCTCAGCCACTaGCATGTTCATCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSHVLSH*HVHQDQ
Trigger: CTGGTCCTGATGAACATGCCAGTGGCTGAGGACATG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTACAGGTGAGGCCAAATaGCCAGGGTCTCTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSTGEAK*PGSLFA
Trigger: TGCAAAAAGAGACCCTGGCCATTTGGCCTCACCTGT...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACTCAGGTCAGAGGCTTTaGGCATGGGCACAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYSGQRL*AWAQAD
Trigger: ATCTGCTTGTGCCCATGCCCAAAGCCTCTGACCTGA...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATCTTTGGTGGCACAGGTaGGAGCTGGCGACGGCTTCG +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNLWWHR*ELATAS
Trigger: CGAAGCCGTCGCCAGCTCCCACCTGTGCCACCAAAG...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTGTCCGCAGGTCCACGTaGGTGTTGAAGTGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCVRRST*VLKWVP
Trigger: GGGAACCCACTTCAACACCCACGTGGACCTGCGGAC...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTACTCCCAGGACGAGGTTaGGAACAAAGAAGGATCCGA +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLLPGRG*EQRRIR
Trigger: TCGGATCCTTCTTTGTTCTCAACCTCGTCCTGGGAG...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTGAGCTCGTAAGACACTaGTTCCAAAAGATGTGCCAG +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSELVRH*FQKMCQ
Trigger: CTGGCACATCTTTTGGAATCAGTGTCTTACGAGCTC...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTCTAGCGGTGGTGACATaGGAGTCAGCATTTCATACA +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSLAVVT*ESAFHT
Trigger: TGTATGAAATGCTGACTCTCATGTCACCACCGCTAG...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTGCTCCTTTTGATGGTTaGCCTTCGAAGCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSAPFDG*PSKHFQ
Trigger: TTGGAAGTGCTTCGAAGGGCAACCATCAAAAGGAGC...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAACTGCCTCCAAAGAGCTaGATTCCCAGGAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLELPPKS*IPRRAK
Trigger: CTTTGCTCTCCTGGGAATGCAGCTCTTTGGAGGCAG...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCACCCTGGGAGCGAATaGCATTGTACATCACCTCAT +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSHPGSE*HCTSPH
Trigger: ATGAGGTGATGTACAATGGCATTCGCTCCCAGGGTG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGCTACATAGTTGCCTATaGACTCCTTCTCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLLHSCL*TPSLCP
Trigger: AGGACACAGAGAAGGAGTGCATAGGCAACTATGTAG...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAGATGCGGCCACATGCTaGTCTGTCATATTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEDAATC*SVIFCP
Trigger: TGGGCAGAATATGACAGAGCAGCATGTGGCCGCATC...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAATGCCCATTAGGCATCTaGCAGCTGTGCCGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIECPLGI*QLCRRG
Trigger: ACCCCTACGGCACAGCTGGCAGATGCCTAATGGGCA...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTGTGAGTGAGCCACTGTaGCTGGTTGTGATGAACAAT +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSVSEPL*LVVMNN
Trigger: ATTGTTCATCACAACCAGCCACAGTGGCTCACTCAC...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCGAGCTGACCCCACCCTaGGAGCGAATGCCATTGTAC +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSELTPP*ERMPLY
Trigger: GTACAATGGCATTCGCTCCCAGGGTGGGGTCAGCTC...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCGACTCTGCCTGTGCCTaGCCCGGTCCTCAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIDSACA*PGPQKS
Trigger: TGACTTTTGAGGACCGGGCCAGGCACAGGCAGAGTC...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGGTCCTCCTTAAGTCCTaGGTTCTCTCCTCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMVLLKS*VLSSSW
Trigger: CCACGAAGAGGAGAGAACCCAGGACTTAAGGAGGAC...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAACTTCCAGCTCAGGTTaGGGCTGGACTAGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLETSSSG*GWTRGV
Trigger: AACACCTCTAGTCCAGCCCCAACCTGAGCTGGAAGT...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATGCCCTGAGGGTGCAGTaGTGTCAGGCTCACAACCCT +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNALRVQ*CQAHNP
Trigger: AGGGTTGTGAGCCTGACACCACTGCACCCTCAGGGC...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCGTGACCTTCCTTCACTaGGTGACCTGGACTGGCGAC +
Preference number: 4 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIVTFLH*VTWTGD
Trigger: GTCGCCAGTCCAGGTCACCCAGTGAAGGAAGGTCAC...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGGCGACGGCTTCGTCTTaGGGTGCTGGTGTCGGAAAT +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSATASS*GAGVGN
Trigger: ATTTCCGACACCAGCACCCCAAGACGAAGCCGTCGC...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTGCGACGGCTTCGTCTTaGGGTGCTGGTGTCGGAAAT +
Preference number: 4 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCATASS*GAGVGN
Trigger: ATTTCCGACACCAGCACCCCAAGACGAAGCCGTCGC...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATGGATGCTGGCCCTGCTaGGGGTGCAAGGAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNGCWPC*GCKELE
Trigger: TTCCAACTCCTTGCACCCCCAGCAGGGCCAGCATCC...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 72 bp GGCCTCGTTGGTCACCTGTTATGGGATGACTTTGGTTaGGGGCTGACCATGGTTCATGAAAGCTCCATCAAT +
Preference number: 4 (lower is better)
Translates to: GLVGHLLWDDFG*GLTMVHESSIN
Trigger: ATTGATGGAGCTTTCATGAACCATGGTCAGCCCCAAACCAAAGTCATCCCATAACAGGTGACCAACGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCTACTTTTGTGCTCTTaGTACTGGCTCTGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSLLLCS*YWLWQE
Trigger: CTCTTGCCAGAGCCAGTATCAAGAGCACAAAAGTAG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCGAGCTCGTAAGACACTaGTTCCAAAAGATGTGCCAG +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSELVRH*FQKMCQ
Trigger: CTGGCACATCTTTTGGAATCAGTGTCTTACGAGCTC...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACGAGGTCTCTGAAGTATaGTCCATCCTGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYEVSEV*SILQDQ
Trigger: TTGATCCTGCAGGATGGATCATACTTCAGAGACCTC...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAACAGCCACGAACAGGTTaGGCATCAGGAAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEQPRTG*ASGRSR
Trigger: TCTGCTCCTTCCTGATGCTCAACCTGTTCGTGGCTG...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGTCTCTCCCTGCCTCCTaGTCGGTGAGTGTCAGACTT +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSSLPAS*SVSVRL
Trigger: AAGTCTGACACTCACCGATCAGGAGGCAGGGAGAGA...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCTCTGGCAAGAGGTGTaGCCACTGAAGAGATATCAA +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSLWQEV*PLKRYQ
Trigger: TTGATATCTCTTCAGTGGGCACACCTCTTGCCAGAG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCCACACAGACATGTGGTaGCGGCGCCTCCGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIHTDMW*RRLRSL
Trigger: GAGGGAGCGGAGGCGCCGGCACCACATGTCTGTGTG...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAATCTTGGCTAGACATTTaGATGTGCCTCCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLESWLDI*MCLLSW
Trigger: CCAGCTGAGGAGGCACATGCAAATGTCTAGCCAAGA...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATAGACCTGCTTCGGGATaGAGAGGCAGAGTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNRPASG*RGRVLA
Trigger: GGCAAGGACTCTGCCTCTGCATCCCGAAGCAGGTCT...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTACATCTCCATGCGGTTaGTGCGACTTGGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCTSPCG*CDLGLC
Trigger: ACAGAGGCCCAAGTCGCAGCAACCGCATGGAGATGT...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAAAGCTTTATGAGCCGTaGAGCTCGGAAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLKLYEP*SSEELQ
Trigger: CTGAAGCTCTTCCGAGCTGCACGGCTCATAAAGCTT...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGAAGCTTTATGAGCCGTaGAGCTCGGAAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMKLYEP*SSEELQ
Trigger: CTGAAGCTCTTCCGAGCTGCACGGCTCATAAAGCTT...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAATCTCAGTGTAATGGATaGGGCCACATGCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLESQCNG*GHMLLC
Trigger: ACAGAGCAGCATGTGGCCGCATCCATTACACTGAGA...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTATTGCTGCATAGATCTTaGCCACAGTCAGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLLLHRS*PQSGQR
Trigger: CCTCTGACCTGACTGTGGGCAAGATCTATGCAGCAA...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCGCGCTGGAACATGGGTaGATTTTTCTGTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSALEHG*IFLFFQ
Trigger: CTGGAAGAACAGAAAAATGCACCCATGTTCCAGCGC...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTAAGTGTTTTCACTGCTaGGTTCCATGGAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSKCFHC*VPWRTP
Trigger: AGGAGTTCTCCATGGAACGCAGCAGTGAAAACACTT...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACTCCCACATCGACATGTaGTGTCTTCTCCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYSHIDM*CLLLLS
Trigger: AGACAGAAGGAGAAGACACCACATGTCGATGTGGGA...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGCCTTCTCTGTGTCCTTaGAACTGTCAGTGCAATAAA +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLPSLCP*NCQCNK
Trigger: TTTATTGCACTGACAGTTCCAAGGACACAGAGAAGG...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCACAGTAAGATGCGGATaGTGTAGCCCTGTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSTVRCG*CSPVSE
Trigger: TTCTGAGACAGGGCTACACCATCCGCATCTTACTGT...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATGGTGAGGCCCCAGGATaGAGGAATCTCGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNGEAPG*RNLESG
Trigger: ACCTGACTCGAGATTCCTCCATCCTGGGGCCTCACC...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCTCTTATAGGCCACTTTaGAGGGACATCTCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSSYRPL*RDISCR
Trigger: TCGGCAAGAGATGTCCCTCCAAAGTGGCCTATAAGA...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGAGAGATTGTTGTTCCTaGAATTGTCCATCATCCGCT +
Preference number: 4 (lower is better)
Translates to: QALIARRESSGQLQGRRLRDCCS*NCPSSA
Trigger: AGCGGATGATGGACAATTCCAGGAACAACAATCTCT...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCCACTGCTGCGTTCCATaGAGAACTCCTCCAACCAGG +
Preference number: 4 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIHCCVP*RTPPTR
Trigger: CCTGGTTGGAGGAGTTCTCCATGGAACGCAGCAGTG...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCGGTGCTTTCGTTCTTTaGATCGGCCTCTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSGAFVL*IGLSPC
Trigger: GCAGGGAGAGAGGCCGATCCAAAGAACGAAAGCACC...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 72 bp CTCTTCTACCTGCTTCATAAAGTATTCCCGTTTCTCTaGGAGTATGTGATGCTCTGGGGTCCAGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LFYLLHKVFPFL*EYVMLWGPGGK
Trigger: CTTCCCTCCTGGACCCCAGAGCATCACATACTCCAAGAGAAACGGGAATACTTTATGAAGCAGGTAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTACTACTTTTGTGCTCTTaGTACTGGCTCTGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLLLLCS*YWLWQE
Trigger: CTCTTGCCAGAGCCAGTATCAAGAGCACAAAAGTAG...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAAGTTGTTGTGCCGGTTaGTGTGACTCTCCTCATCTA +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLESCCAG*CDSPHL
Trigger: TAGATGAGGAGAGTCACATCAACCGGCACAACAACT...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATCACTCAGGAGGTCACTaGCAGCTCCACACATCATGC +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNHSGGH*QLHTSC
Trigger: GCATGATGTGTGGAGCTGTCAGTGACCTCCTGAGTG...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTACTCTGGCAAGAGGTGTaGCCACTGAAGAGATATCAA +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLLWQEV*PLKRYQ
Trigger: TTGATATCTCTTCAGTGGGCACACCTCTTGCCAGAG...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGATTGGCCAGAGCAAATaGTACCAATGCACCAACCAC +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMIGQSK*YQCTNH
Trigger: GTGGTTGGTGCATTGGTAGCATTTGCTCTGGCCAAT...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004214.15
CDS-3UTR GCA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGCCTTGGAACTGTCAGTaGAATAAAAGAACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: FQCVGLQSHGERPVQRPEPWNCQ*NKRTFL
Trigger: AAGGAAAGTTCTTTTATTGCACTGACAGTTCCAAGG...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATAGATGGACATCTCCATaGGGTTGCTGCGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNRWTSP*GCCDLG
Trigger: GCCCAAGTCGCAGCAACCGCATGGAGATGTCCATCT...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGGGGGAGACTACAAAGTaGCACACACGGTACTGGAAG +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSGETTK*HTRYWK
Trigger: CTTCCAGTACCGTGTGTGGCACTTTGTAGTCTCCCC...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCAGGTCCACAGTAAGATaGGGATGGTGTAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIRSTVR*GWCSPV
Trigger: GACAGGGCTACACCATCCGCATCTTACTGTGGACCT...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATAGCTCCGAGTCTAGCTaGTGTCTGTCTGCACCACCT +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNSSESS*CLSAPP
Trigger: AGGTGGTGCAGACAGACAGCAGCTAGACTCGGAGCT...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAGCGCTGGAACATGGGTaGATTTTTCTGTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEALEHG*IFLFFQ
Trigger: CTGGAAGAACAGAAAAATGCACCCATGTTCCAGCGC...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCCTCGCTCTTCAGAATTaGAGCGGGAGACATCTGGAG +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSLALQN*SGRHLE
Trigger: CTCCAGATGTCTCCCGCTGCAATTCTGAAGAGCGAG...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGCTCGCTCTTCAGAATTaGAGCGGGAGACATCTGGAG +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSLALQN*SGRHLE
Trigger: CTCCAGATGTCTCCCGCTGCAATTCTGAAGAGCGAG...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACCTCCTAAGGCATCATTaGTATTGTACAGCACAGTGG +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYLLRHH*YCTAQW
Trigger: CCACTGTGCTGTACAATACCAATGATGCCTTAGGAG...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCACAGCCAGTTCCAGGTaGCTCCTAAGGCATCATTGG +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSTASSR*LLRHHW
Trigger: CCAATGATGCCTTAGGAGCCACCTGGAACTGGCTGT...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATCGCTCAATCTGTTGCTaGCGCCGGAGCTTCATGAAC +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNRSICC*RRSFMN
Trigger: GTTCATGAAGCTCCGGCGCCAGCAACAGATTGAGCG...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGTGGGACTTGACCATGTaGCGGATAGAGATGCGCAGA +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSWDLTM*RIEMRR
Trigger: TCTGCGCATCTCTATCCGCCACATGGTCAAGTCCCA...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGGTGAAAATAGAGGCGTaGCCCCATGCCATACATCTT +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMVKIEA*PHAIHL
Trigger: AAGATGTATGGCATGGGGCCACGCCTCTATTTTCAC...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTATCCCCTGTCAGGATCTaGAACACTGTCATGATAGCT +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLSPVRI*NTVMIA
Trigger: AGCTATCATGACAGTGTTCCAGATCCTGACAGGGGA...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACTTGTTGAGGGCTTCTTaGCTAGACATTTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYLLRAS*LDICMC
Trigger: GCACATGCAAATGTCTAGCCAAGAAGCCCTCAACAA...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAAAGCTCAGGTTGGGGCTaGACTAGAGGTGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIESSGWG*TRGVSA
Trigger: AGCAGAAACACCTCTAGTCCAGCCCCAACCTGAGCT...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAACCTCCTTCAAGGGACTaGCTTCTCCATCCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEPPSRD*LLHPSC
Trigger: ACAAGACGGATGGAGAAGCCAGTCCCTTGAAGGAGG...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAACAGAGGCTTTGGGCATaGGCACAAGCAGATCCAACA +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEQRLWA*AQADPT
Trigger: TGTTGGATCTGCTTGTGCCCATGCCCAAAGCCTCTG...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACCCATGCGCTGGAACATaGGTGCATTTTTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYPCAGT*VHFSVL
Trigger: AAGAACAGAAAAATGCACCCATGTTCCAGCGCATGG...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCGAGGGCTCCATGCGCTaGAACATGGGTGCATTTTTC +
Preference number: 4 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIEGSMR*NMGAFF
Trigger: GAAAAATGCACCCATGTTCCAGCGCATGGAGCCCTC...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCGGCGCCGGAGCTTCATaGACGCTCTTCGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIGAGAS*TLFGSP
Trigger: TGGAGAACCGAAGAGCGTTCATGAAGCTCCGGCGCC...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCAAGCACTTCCAAGGCTaGTGTTCCCGAGTTTTTATT +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSKHFQG*CSRVFI
Trigger: AATAAAAACTCGGGAACATCAGCCTTGGAAGTGCTT...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTAAGATGTGCCAGGTCTaGAGATTGCCCAGACAACCT +
Preference number: 4 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCKMCQV*RLPRQP
Trigger: AGGTTGTCTGGGCAATCTTCAGACCTGGCACATCTT...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGAGGCAATCATGGCCATaGTGGTATACTCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMRQSWP*WYTQRM
Trigger: CATCCTTTGAGTATACCATCATGGCCATGATTGCCT...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATGTCTCAGAAGCTTTATaGGCCGTGCAGCTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNVSEAL*AVQLGR
Trigger: TCTTCCGAGCTGCACGGCTCATAAAGCTTCTGAGAC...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCTACCTGAATTGTTCATaGAGCATGCTCGATGCAACT +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSYLNCS*SMLDAT
Trigger: AGTTGCATCGAGCATGCTTCATGAACAATTCAGGTA...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCAGATTCCGGAGGGATaGCCAATACTTGGTTATTTT +
Preference number: 4 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSQIPEG*PILGYF
Trigger: AAAATAACCAAGTATTGGGCATCCCTCCGGAATCTG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGCTACATAGTTGCCTATaGACTCCTTCTCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMLHSCL*TPSLCP
Trigger: AGGACACAGAGAAGGAGTGCATAGGCAACTATGTAG...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGAGGCGAGCTCATAGGTaGAAGGAGCAGAGTAGTACT +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSRRAHR*KEQSST
Trigger: AGTACTACTCTGCTCCTTGCACCTATGAGCTCGCCT...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGTCTCAGTGTAATGGATaGGGCCACATGCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSSQCNG*GHMLLC
Trigger: ACAGAGCAGCATGTGGCCGCATCCATTACACTGAGA...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATTGTTCATGAAGCATaGTCGATGCAACTTGCCACT +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYIVHEA*SMQLAT
Trigger: AGTGGCAAGTTGCATCGAGCATGCTTCATGAACAAT...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTACTCCTAAGGCATCATTaGTATTGTACAGCACAGTGG +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLLLRHH*YCTAQW
Trigger: CCACTGTGCTGTACAATACCAATGATGCCTTAGGAG...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAATGAACATAGAGCTATaGGGCACCATGGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEMNIEL*GTMAFP
Trigger: TGGAAAAGCCATGGTGCCCCATAGCTCTATGTTCAT...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAGGTATACTCAAAGGATaGGGAGACTACAAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLGILKG*GDYKVP
Trigger: TGGCACTTTGTAGTCTCCCCATCCTTTGAGTATACC...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATCAGAGGCTTTGGGCATaGGCACAAGCAGATCCAACA +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNQRLWA*AQADPT
Trigger: TGTTGGATCTGCTTGTGCCCATGCCCAAAGCCTCTG...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGCCATGCGCTGGAACATaGGTGCATTTTTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMPCAGT*VHFSVL
Trigger: AAGAACAGAAAAATGCACCCATGTTCCAGCGCATGG...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGTTGTCCATCATCCGCTaGGTCCATACAAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSLSIIR*VHTSQL
Trigger: CAGTTGGCTTGTATGGACCCAGCGGATGATGGACAA...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCTTGTCCATCATCCGCTaGGTCCATACAAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSLSIIR*VHTSQL
Trigger: CAGTTGGCTTGTATGGACCCAGCGGATGATGGACAA...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACAGAGATTGTTGTTCCTaGAATTGTCCATCATCCGCT +
Preference number: 4 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYRDCCS*NCPSSA
Trigger: AGCGGATGATGGACAATTCCAGGAACAACAATCTCT...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCGGATGCTGGCCCTGCTaGGGGTGCAAGGAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIGCWPC*GCKELE
Trigger: TTCCAACTCCTTGCACCCCCAGCAGGGCCAGCATCC...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 72 bp ACAGCATGGCAGGAGCAGTTACTGCATCTCATACACTaGGATTTAACCATCTCAGGGTGTGCTAACATGCAG +
Preference number: 4 (lower is better)
Translates to: TAWQEQLLHLIH*DLTISGCANMQ
Trigger: CTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTGTATGAGATGCAGTAACTGCTCCTGCCATGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 72 bp AACTCATCTGAACTGCATCAGATTCCTCAGGGGTTCTaGTCTGGTGTTAATCATCACGCTGTGACTGGTCAC +
Preference number: 4 (lower is better)
Translates to: NSSELHQIPQGF*SGVNHHAVTGH
Trigger: GTGACCAGTCACAGCGTGATGATTAACACCAGACAAGAACCCCTGAGGAATCTGATGCAGTTCAGATGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAAGAGGTCTCTGAAGTATaGTCCATCCTGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEEVSEV*SILQDQ
Trigger: TTGATCCTGCAGGATGGATCATACTTCAGAGACCTC...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCGCTTGGGCAAGCGCTTaGTGGTTTTCAGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIAWASA*WFSVAA
Trigger: TGCGGCCACTGAAAACCATCAAGCGCTTGCCCAAGC...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAACTAGCGGTGGTGACATaGGAGTCAGCATTTCATACA +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIELAVVT*ESAFHT
Trigger: TGTATGAAATGCTGACTCTCATGTCACCACCGCTAG...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCATTCAGGCGGTGTGCTaGCAGCCTCAGGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIIQAVC*QPQGGM
Trigger: CATTCCTCCCTGAGGCTGTCAGCACACCGCCTGAAT...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCGCCAGGTCTGAAGATTaGCCAGACAACCTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSARSED*PDNLKD
Trigger: ATCTTTGAGGTTGTCTGGGCAATCTTCAGACCTGGC...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGGCCAGGTCTGAAGATTaGCCAGACAACCTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSARSED*PDNLKD
Trigger: ATCTTTGAGGTTGTCTGGGCAATCTTCAGACCTGGC...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGCAGATTCCGGAGGGATaGCCAATACTTGGTTATTTT +
Preference number: 4 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMQIPEG*PILGYF
Trigger: AAAATAACCAAGTATTGGGCATCCCTCCGGAATCTG...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCCTGCCTTCAGCCTCCTaGTCTGTCAGAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKILPSAS*SVRAAS
Trigger: GGATGCAGCTCTGACAGAGCAGGAGGCTGAAGGCAG...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGTGCTCTGTCATATTCTaGCCAGACACGGACAAACTC +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSCSVIF*PDTDKL
Trigger: GAGTTTGTCCGTGTCTGGGCAGAATATGACAGAGCA...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAATTCTGTTCTTCCAGCTaGTGTCTCTGTTTCTTTACC +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEFCSSS*CLCFFT
Trigger: GGTAAAGAAACAGAGACAGCAGCTGGAAGAACAGAA...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCTGCCCATTAGGCATCTaGCAGCTGTGCCGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKICPLGI*QLCRRG
Trigger: ACCCCTACGGCACAGCTGGCAGATGCCTAATGGGCA...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCATGCTCGATGCAACTTaGCACTGTAGAACTCCAAGC +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSMLDAT*HCRTPS
Trigger: GCTTGGAGTTCTACAGTGGCAAGTTGCATCGAGCAT...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCGTGAGTGAGCCACTGTaGCTGGTTGTGATGAACAAT +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSVSEPL*LVVMNN
Trigger: ATTGTTCATCACAACCAGCCACAGTGGCTCACTCAC...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCGTGAAAATAGAGGCGTaGCCCCATGCCATACATCTT +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSVKIEA*PHAIHL
Trigger: AAGATGTATGGCATGGGGCCACGCCTCTATTTTCAC...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATAGCCTCCTGCTGGATTaGGTCACAGTTTCCATGACA +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNSLLLD*VTVSMT
Trigger: TGTCATGGAAACTGTGACCCAATCCAGCAGGAGGCT...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGCTTGATGGTTTTCAGTaGCCGCAGAACTCGAAGTAC +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSLDGFQ*PQNSKY
Trigger: GTACTTCGAGTTCTGCGGCCACTGAAAACCATCAAG...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCACAGTAAGATGCGGATaGTGTAGCCCTGTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSTVRCG*CSPVSE
Trigger: TTCTGAGACAGGGCTACACCATCCGCATCTTACTGT...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAATCTTATAGGCCACTTTaGAGGGACATCTCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIESYRPL*RDISCR
Trigger: TCGGCAAGAGATGTCCCTCCAAAGTGGCCTATAAGA...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 72 bp GATGACCTAGATACCTGTCATCACTTTCCCACAATGTaGGCCTTTGAGGTTAGTACCAGTGCACCTTACCAT +
Preference number: 4 (lower is better)
Translates to: DDLDTCHHFPTM*AFEVSTSAPYH
Trigger: ATGGTAAGGTGCACTGGTACTAACCTCAAAGGCCAACATTGTGGGAAAGTGATGACAGGTATCTAGGTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR CAA 72 bp TATGTTACAGGATATCCACCTGACCAACATGCACTGTaGAACTCCAGTGTTAGGCGAGATGCACCAATACTC +
Preference number: 4 (lower is better)
Translates to: YVTGYPPDQHAL*NSSVRRDAPIL
Trigger: GAGTATTGGTGCATCTCGCCTAACACTGGAGTTCAACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAATTTCCTTTGAATAGCTaGACAGCGATGACGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEFPLNS*TAMTAK
Trigger: CTTTGCCGTCATCGCTGTTCAGCTATTCAAAGGAAA...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCTCAGAAAGCTCATATTaGAGCCACTGGTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSSESSY*SHWCSP
Trigger: TGGTGAACACCAGTGGCTTCAATATGAGCTTTCTGA...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGTTGTGCCGGTTGATGTaGCTCTCCTCATCTAACTTT +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSLCRLM*LSSSNF
Trigger: AAAGTTAGATGAGGAGAGTCACATCAACCGGCACAA...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCTTGTGCCGGTTGATGTaGCTCTCCTCATCTAACTTT +
Preference number: 4 (lower is better)
Translates to: GRALNFPLDPIPCSFSKILCRLM*LSSSNF
Trigger: AAAGTTAGATGAGGAGAGTCACATCAACCGGCACAA...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATGCTCCTTTTGATGGTTaGCCTTCGAAGCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNAPFDG*PSKHFQ
Trigger: TTGGAAGTGCTTCGAAGGGCAACCATCAAAAGGAGC...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAACAGAAACAAAAACTCTaGATAGTAGAGGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEQKQKL*IVEEVS
Trigger: ACTCACCTCCTCTACTATGCAGAGTTTTTGTTTCTG...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAAAAGTATGATCCATCCTaGAGGATCAAGCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEKYDPS*RIKPWS
Trigger: AGACCAAGGCTTGATCCTGCAGGATGGATCATACTT...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCAAGTATGATCCATCCTaGAGGATCAAGCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIKYDPS*RIKPWS
Trigger: AGACCAAGGCTTGATCCTGCAGGATGGATCATACTT...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATTGCTCTGTCATATTCTaGCCAGACACGGACAAACTC +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNCSVIF*PDTDKL
Trigger: GAGTTTGTCCGTGTCTGGGCAGAATATGACAGAGCA...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCAAGTGTTTTCACTGCTaGGTTCCATGGAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIKCFHC*VPWRTP
Trigger: AGGAGTTCTCCATGGAACGCAGCAGTGAAAACACTT...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATTCCCCTGTCAGGATCTaGAACACTGTCATGATAGCT +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNSPVRI*NTVMIA
Trigger: AGCTATCATGACAGTGTTCCAGATCCTGACAGGGGA...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAATTGTTGAGGGCTTCTTaGCTAGACATTTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIELLRAS*LDICMC
Trigger: GCACATGCAAATGTCTAGCCAAGAAGCCCTCAACAA...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATCTTGATGGTTTTCAGTaGCCGCAGAACTCGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNLDGFQ*PQNSKY
Trigger: GTACTTCGAGTTCTGCGGCCACTGAAAACCATCAAG...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTGGTATACTCAAAGGATaGGGAGACTACAAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCGILKG*GDYKVP
Trigger: TGGCACTTTGTAGTCTCCCCATCCTTTGAGTATACC...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCACTTCCATCAGGAGGTaGAGAGATGCCGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKITSIRR*RDAASV
Trigger: CACACTGGCGGCATCTCTCCACCTCCTGATGGAAGT...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAGATCCCAATGAAATATaGTTCTGTCTTCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEDPNEI*FCLLQS
Trigger: AGACTGGAGAAGACAGAACCATATTTCATTGGGATC...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
3UTR CAA 72 bp CTAGACCCTTGGGGTAGGTTGGACCAATTTGTGAATTaGTTGTTTTGGTGTCATGTGACTTCTCTGGGATAC +
Preference number: 4 (lower is better)
Translates to: LDPWGRLDQFVN*LFWCHVTSLGY
Trigger: GTATCCCAGAGAAGTCACATGACACCAAAACAACAAATTCACAAATTGGTCCAACCTACCCCAAGGGTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 72 bp TTGGCCTTTGAGGTTAGTACCAGTGCACCTTACCATTaGAAATTTATTCCTGACAAAACACCTCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LAFEVSTSAPYH*KFIPDKTPPVP
Trigger: GGGGACAGGAGGTGTTTTGTCAGGAATAAATTTCAAATGGTAAGGTGCACTGGTACTAACCTCAAAGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGTTTCTTCAGCAAGCATaGCTTCCTCTGCTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSFLQQA*LPLLCL
Trigger: TAGACAAAGCAGAGGAAGTCATGCTTGCTGAAGAAA...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGAAGCACTTCCAAGGCTaGTGTTCCCGAGTTTTTATT +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSKHFQG*CSRVFI
Trigger: AATAAAAACTCGGGAACATCAGCCTTGGAAGTGCTT...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGGAGCCACGAAGATATTaGCAAAGAAGAAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSEPRRY*QRRKGR
Trigger: TCTTCCCTTTCTTCTTTGTCAATATCTTCGTGGCTC...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCGTCTCAGAAGCTTTATaGGCCGTGCAGCTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIVSEAL*AVQLGR
Trigger: TCTTCCGAGCTGCACGGCTCATAAAGCTTCTGAGAC...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAGTTTATAGTAGTCCATaGTCATCATTGCTGCATAGA +
Preference number: 4 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLVYSSP*SSLLHR
Trigger: TCTATGCAGCAATGATGATCATGGACTACTATAAAC...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCTCTTGGCGTATTTCCTaGCAATGTTATCTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: GRALNFPLDPIPCSFSKISWRIS*QCYLLR
Trigger: TCGGAGAAGATAACATTGTCAGGAAATACGCCAAGA...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAAAACCCTTATGGAAGATaGACCCTAGAGCCACAATTT +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIENPYGR*TLEPQF
Trigger: AAATTGTGGCTCTAGGGTTCATCTTCCATAAGGGTT...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCGAGATATCAACGCAGTaGTCATCGCTGGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIEISTQ*SSLESR
Trigger: CCGAGACTCCAGCGATGAGCACTGCGTTGATATCTC...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAATTCTGTTCTTCCAGCTaGTGTCTCTGTTTCTTTACC +
Preference number: 4 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEFCSSS*CLCFFT
Trigger: GGTAAAGAAACAGAGACAGCAGCTGGAAGAACAGAA...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCACCGTGAAACAGTTCTaGCGGACTGGTATGGGGTTG +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKITVKQF*RTGMGL
Trigger: CAACCCCATACCAGTCCGGCAGAACTGTTTCACGGT...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATTTCTGTCTCTTTCAATaGAAGGCATGTTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNFCLFQ*KACWEQ
Trigger: CTGCTCCCAACATGCCTTCCATTGAAAGAGACAGAA...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCGTCCTCCTTAAGTCCTaGGTTCTCTCCTCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIVLLKS*VLSSSW
Trigger: CCACGAAGAGGAGAGAACCCAGGACTTAAGGAGGAC...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCCCTTCTCTGTGTCCTTaGAACTGTCAGTGCAATAAA +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSPSLCP*NCQCNK
Trigger: TTTATTGCACTGACAGTTCCAAGGACACAGAGAAGG...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCTCAGGTCAGAGGCTTTaGGCATGGGCACAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKISGQRL*AWAQAD
Trigger: ATCTGCTTGTGCCCATGCCCAAAGCCTCTGACCTGA...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATAGGTATGAACCCTTATaGAAGATGAACCCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNRYEPL*KMNPRA
Trigger: GGCTCTAGGGTTCATCTTCCATAAGGGTTCATACCT...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCAAGATGTGCCAGGTCTaGAGATTGCCCAGACAACCT +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIKMCQV*RLPRQP
Trigger: AGGTTGTCTGGGCAATCTTCAGACCTGGCACATCTT...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCAGCAGAAGATCCCAATaGAATATGGTTCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSSRRSQ*NMVLSS
Trigger: AGAAGACAGAACCATATTTCATTGGGATCTTCTGCT...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCCAGAAACAAAAACTCTaGATAGTAGAGGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSQKQKL*IVEEVS
Trigger: ACTCACCTCCTCTACTATGCAGAGTTTTTGTTTCTG...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCTGCAGGATCAAGCCTTaGTCTATCATCTTTATAACC +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSCRIKP*SIIFIT
Trigger: GGTTATAAAGATGATAGACCAAGGCTTGATCCTGCA...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCACAGGTGAGGCCAAATaGCCAGGGTCTCTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKITGEAK*PGSLFA
Trigger: TGCAAAAAGAGACCCTGGCCATTTGGCCTCACCTGT...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 72 bp TCCAATTATAGGGATGGTAGTGCTATATCTCTGCAATaGACTTTCACAAACCACCATCCAACAGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SNYRDGSAISLQ*TFTNHHPTGLL
Trigger: CAGCAAACCTGTTGGATGGTGGTTTGTGAAAGTCAATTGCAGAGATATAGCACTACCATCCCTATAATTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCAGTTGTTGTGCCGGTTaGTGTGACTCTCCTCATCTA +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKISCCAG*CDSPHL
Trigger: TAGATGAGGAGAGTCACATCAACCGGCACAACAACT...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCGTTTATAGTAGTCCATaGTCATCATTGCTGCATAGA +
Preference number: 4 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSVYSSP*SSLLHR
Trigger: TCTATGCAGCAATGATGATCATGGACTACTATAAAC...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGCCTTGGAACTGTCAGTaGAATAAAAGAACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: HLDLTISGCANMQQNKDSPWNCQ*NKRTFL
Trigger: AAGGAAAGTTCTTTTATTGCACTGACAGTTCCAAGG...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCAGGCAATCATGGCCATaGTGGTATACTCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIRQSWP*WYTQRM
Trigger: CATCCTTTGAGTATACCATCATGGCCATGATTGCCT...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCTCAGAAAGCTCATATTaGAGCCACTGGTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKISESSY*SHWCSP
Trigger: TGGTGAACACCAGTGGCTTCAATATGAGCTTTCTGA...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR GCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCCTTGTTGGTTCTGATTaGATTGGCCAGAGCAAATGC +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKILVGSD*IGQSKC
Trigger: GCATTTGCTCTGGCCAATGCAATCAGAACCAACAAG...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004214.15
3UTR CAA 72 bp TCTATTCAGAGATGCTTTCTAGACCCTTGGGGTAGGTaGGACCAATTTGTGAATTTGTTGTTTTGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: SIQRCFLDPWGR*DQFVNLLFWCH
Trigger: ATGACACCAAAACAACAAATTCACAAATTGGTCCAACCTACCCCAAGGGTCTAGAAAGCATCTCTGAATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 72 bp GTAGAACACAGATTTATCCTTCTTGGCTGTCCTAGATaGGGCCTGTTCCAAAATACTTGGATAATCAATCAA +
Preference number: 4 (lower is better)
Translates to: VEHRFILLGCPR*GLFQNTWIINQ
Trigger: TTGATTGATTATCCAAGTATTTTGGAACAGGCCCAATCTAGGACAGCCAAGAAGGATAAATCTGTGTTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR TCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCAGGAGCAGAAGAAGATaGAGGAGACAAAATAAACGT +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIRSRRR*RRQNKR
Trigger: ACGTTTATTTTGTCTCCTTCATCTTCTTCTGCTCCT...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CCA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCTGCAGGATCAAGCCTTaGTCTATCATCTTTATAACC +
Preference number: 4 (lower is better)
Translates to: DPVIGITAVKVLSNLRKICRIKP*SIIFIT
Trigger: GGTTATAAAGATGATAGACCAAGGCTTGATCCTGCA...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
3UTR CAA 72 bp GCAAGAAGTAGAATCCAAAGTCAAACATCTTTAAGCTaGTTCTCTTCGGGGACTTTTTATATCTTCCATGTC +
Preference number: 4 (lower is better)
Translates to: ARSRIQSQTSLS*FSSGTFYIFHV
Trigger: GACATGGAAGATATAAAAAGTCCCCGAAGAGAACAAGCTTAAAGATGTTTGACTTTGGATTCTACTTCTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS GCA 90 bp CGGCCGCCGGCCCCGAGGCCGGGACGGGGGTTCCTTGTCGGTTCCTaGTCTGGTCCGAGTCTCCATCGCCTGAGCCTGGCCTGCCAACGA +
Preference number: 5 (lower is better)
Translates to: RPPAPRPGRGFLVGS*SGPSLHRLSLACQR
Trigger: TCGTTGGCAGGCCAGGCTCAGGCGATGGAGACTCGGACCAGAGCAGGAACCGACAAGGAACCCCCGTCCCGGCCTCGGGGCCGGCGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000187541.7
ENSMUST00000238369.2
CDS CCA 90 bp GCCGGCCCCGAGGCCGGGACGGGGGTTCCTTGTCGGTTCCTGCTCTaGTCCGAGTCTCCATCGCCTGAGCCTGGCCTGCCAACGACCACC +
Preference number: 5 (lower is better)
Translates to: AGPEAGTGVPCRFLL*SESPSPEPGLPTTT
Trigger: GGTGGTCGTTGGCAGGCCAGGCTCAGGCGATGGAGACTCGGACCAGAGCAGGAACCGACAAGGAACCCCCGTCCCGGCCTCGGGGCCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000187541.7
ENSMUST00000238369.2
CDS CCA 90 bp CGGAGCGCGGGGAAGCAGGCAACATGCCCACCTCGTCGGAGGCATTaGCCTCGAGCAGGGCGCACTGCTGCGGCCGCCATGCCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: RSAGKQATCPPRRRH*PRAGRTAAAAMPPH
Trigger: ATGAGGAGGCATGGCGGCCGCAGCAGTGCGCCCTGCTCGAGGCCAATGCCTCCGACGAGGTGGGCATGTTGCCTGCTTCCCCGCGCTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS GCA 90 bp AGTTGTCGAAGCCGGCCACCGCGGAGCGCGGGGAAGCAGGCAACATaGCCACCTCGTCGGAGGCATTGGCCTCGAGCAGGGCGCACTGCT +
Preference number: 5 (lower is better)
Translates to: SCRSRPPRSAGKQAT*PPRRRHWPRAGRTA
Trigger: AGCAGTGCGCCCTGCTCGAGGCCAATGCCTCCGACGAGGTGGGCATGTTGCCTGCTTCCCCGCGCTCCGCGGTGGCCGGCTTCGACAACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS GCA 90 bp GGCTCACAGGAAGGAAGGGGCTGGAGCCTGCATCCAGCGTGGTGCTaGCCTCCCAGCCCGGGCCCTCGCCTTCCTGCACCGGGAAGAAGT +
Preference number: 5 (lower is better)
Translates to: GSQEGRGWSLHPAWC*PPSPGPRLPAPGRS
Trigger: ACTTCTTCCCGGTGCAGGAAGGCGAGGGCCCGGGCTGGGAGGGCAGCACCACGCTGGATGCAGGCTCCAGCCCCTTCCTTCCTGTGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS TCA 90 bp GGGGGTTCCTTGTCGGTTCCTGCTCTGGTCCGAGTCTCCATCGCCTaGGCCTGGCCTGCCAACGACCACCGCCTCCCCGAAGCGAGCCAT +
Preference number: 5 (lower is better)
Translates to: GGSLSVPALVRVSIA*AWPANDHRLPEASH
Trigger: ATGGCTCGCTTCGGGGAGGCGGTGGTCGTTGGCAGGCCAGGCTCAGGCGATGGAGACTCGGACCAGAGCAGGAACCGACAAGGAACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000187541.7
ENSMUST00000238369.2
CDS GCA 90 bp ACCGCCTCCCCGAAGCGAGCCATCTCCCACTCCTTGCGCCGGGCCTaGGGGGTGCTCTGCATCTTGTGTGCCTCGTGGGCCTTGATGATG +
Preference number: 5 (lower is better)
Translates to: TASPKRAISHSLRRA*GVLCILCASWALMM
Trigger: CATCATCAAGGCCCACGAGGCACACAAGATGCAGAGCACCCCGCAGGCCCGGCGCAAGGAGTGGGAGATGGCTCGCTTCGGGGAGGCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS GCA 90 bp GTCGGTTCCTGCTCTGGTCCGAGTCTCCATCGCCTGAGCCTGGCCTaGCAACGACCACCGCCTCCCCGAAGCGAGCCATCTCCCACTCCT +
Preference number: 5 (lower is better)
Translates to: VGSCSGPSLHRLSLA*QRPPPPRSEPSPTP
Trigger: AGGAGTGGGAGATGGCTCGCTTCGGGGAGGCGGTGGTCGTTGGCAGGCCAGGCTCAGGCGATGGAGACTCGGACCAGAGCAGGAACCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS GCA 90 bp AAGCGAGCCATCTCCCACTCCTTGCGCCGGGCCTGCGGGGTGCTCTaGATCTTGTGTGCCTCGTGGGCCTTGATGATGTCCCGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: KRAISHSLRRACGVL*ILCASWALMMSRCS
Trigger: CGAGCAGCGGGACATCATCAAGGCCCACGAGGCACACAAGATGCAGAGCACCCCGCAGGCCCGGCGCAAGGAGTGGGAGATGGCTCGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS TCA 90 bp CAGACCTGCTTCGGGATGCAGAGGCAGAGTCCTTGCCCTCAGTCCTaGCTCGGCGATGCCGGCTTCGCCTCTGACTCTGCCTGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: QTCFGMQRQSPCPQS*LGDAGFASDSACAW
Trigger: CCAGGCACAGGCAGAGTCAGAGGCGAAGCCGGCATCGCCGAGTCAGGACTGAGGGCAAGGACTCTGCCTCTGCATCCCGAAGCAGGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS TCA 90 bp GAGTCCTTGCCCTCAGTCCTGACTCGGCGATGCCGGCTTCGCCTCTaGCTCTGCCTGTGCCTGGCCCGGTCCTCAAAAGTCACCACAGTC +
Preference number: 5 (lower is better)
Translates to: ESLPSVLTRRCRLRL*LCLCLARSSKVTTV
Trigger: GACTGTGGTGACTTTTGAGGACCGGGCCAGGCACAGGCAGAGTCAGAGGCGAAGCCGGCATCGCCGAGTCAGGACTGAGGGCAAGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 90 bp TCTCCCCCTCAACGGACACCCCTTCATCCAGACTCCGCTCCTGGCTaGCAGACCTGCTTCGGGATGCAGAGGCAGAGTCCTTGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: SPPQRTPLHPDSAPG*QTCFGMQRQSPCPQ
Trigger: CTGAGGGCAAGGACTCTGCCTCTGCATCCCGAAGCAGGTCTGCCAGCCAGGAGCGGAGTCTGGATGAAGGGGTGTCCGTTGAGGGGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 90 bp TCCTTCTCCCCCTCAACGGACACCCCTTCATCCAGACTCCGCTCCTaGCTGGCAGACCTGCTTCGGGATGCAGAGGCAGAGTCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: SFSPSTDTPSSRLRS*LADLLRDAEAESLP
Trigger: GGGCAAGGACTCTGCCTCTGCATCCCGAAGCAGGTCTGCCAGCCAGGAGCGGAGTCTGGATGAAGGGGTGTCCGTTGAGGGGGAGAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 90 bp CTGGGTGACCTGGACTGGCGACGTTCTGGGGACTCCCAGTCGGCCTaGGTCCCTCGCTCTTCAGAATTGCAGCGGGAGACATCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: LGDLDWRRSGDSQSA*VPRSSELQRETSGE
Trigger: CTCTCCAGATGTCTCCCGCTGCAATTCTGAAGAGCGAGGGACCCAGGCCGACTGGGAGTCCCCAGAACGTCGCCAGTCCAGGTCACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 90 bp ACACGCACAGCCCGGAGGGTCCGCAGGTCCACGTGGGTGTTGAAGTaGGTTCCCGCAGTGGCCAGGATGCCACTAAGGACCACGATGAAG +
Preference number: 5 (lower is better)
Translates to: TRTARRVRRSTWVLK*VPAVARMPLRTTMK
Trigger: CTTCATCGTGGTCCTTAGTGGCATCCTGGCCACTGCGGGAACCCACTTCAACACCCACGTGGACCTGCGGACCCTCCGGGCTGTGCGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000187541.7
ENSMUST00000211821.2
ENSMUST00000238369.2
CDS CCA 90 bp TACCCTGTCTATTGGGGGTCTGTGACCTTCCTTCACTGGGTGACCTaGACTGGCGACGTTCTGGGGACTCCCAGTCGGCCTGGGTCCCTC +
Preference number: 5 (lower is better)
Translates to: YPVYWGSVTFLHWVT*TGDVLGTPSRPGSL
Trigger: GAGGGACCCAGGCCGACTGGGAGTCCCCAGAACGTCGCCAGTCCAGGTCACCCAGTGAAGGAAGGTCACAGACCCCCAATAGACAGGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 90 bp GGGAACCGGTACCCTGTCTATTGGGGGTCTGTGACCTTCCTTCACTaGGTGACCTGGACTGGCGACGTTCTGGGGACTCCCAGTCGGCCT +
Preference number: 5 (lower is better)
Translates to: GNRYPVYWGSVTFLH*VTWTGDVLGTPSRP
Trigger: AGGCCGACTGGGAGTCCCCAGAACGTCGCCAGTCCAGGTCACCCAGTGAAGGAAGGTCACAGACCCCCAATAGACAGGGTACCGGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 90 bp CTCGGTCAGGCAAGCGCTGTTGCTCTCCAGAGCTTGAGAGGCCAGTaGGGATCCACCCTCACTTCCATCAGGAGGTGGAGAGATGCCGCC +
Preference number: 5 (lower is better)
Translates to: LGQASAVALQSLRGQ*GSTLTSIRRWRDAA
Trigger: GGCGGCATCTCTCCACCTCCTGATGGAAGTGAGGGTGGATCCCCACTGGCCTCTCAAGCTCTGGAGAGCAACAGCGCTTGCCTGACCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS-3UTR CAA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGGCGCCCTCTGCGCTTTaGACTGCTTGTAGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGAPSAL*TACRRP
Trigger: CGGCCGCCTACAAGCAGTCAAAAGCGCAGAGGGCGC...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS TCA 90 bp GTCTCTCCTCCCCCAGCCTCCTGCTGGATTGGGTCACAGTTTCCATaGCAGGATCTAGGCAGCCACGGTGGCTCCCGTTTGCCCAAGGAC +
Preference number: 5 (lower is better)
Translates to: VSPPPASCWIGSQFP*QDLGSHGGSRLPKD
Trigger: GTCCTTGGGCAAACGGGAGCCACCGTGGCTGCCTAGATCCTGTCATGGAAACTGTGACCCAATCCAGCAGGAGGCTGGGGGAGGAGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS TCA 90 bp GGCTACGGCTGCCTCAAAGGTGAGTGTCTCCTCCTCGCCACAGTCTaGGGCGTGGGAGTCTTCATGGAGGGCCAGATAGGGCTCGGAGAT +
Preference number: 5 (lower is better)
Translates to: GYGCLKGECLLLATV*GVGVFMEGQIGLGD
Trigger: ATCTCCGAGCCCTATCTGGCCCTCCATGAAGACTCCCACGCCTCAGACTGTGGCGAGGAGGAGACACTCACCTTTGAGGCAGCCGTAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 90 bp CCCGGCCCACATCCAGCTGTACGTCCCCAAGAAGGGCTTGTTCACTaGTGCCTTCAGCCTCCTGCTCTGTCAGAGCTGCATCCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: PGPHPAVRPQEGLVH*CLQPPALSELHPSP
Trigger: TGGGGAAGGATGCAGCTCTGACAGAGCAGGAGGCTGAAGGCAGCAGTGAACAAGCCCTTCTTGGGGACGTACAGCTGGATGTGGGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 90 bp AGGCCAGTGGGGATCCACCCTCACTTCCATCAGGAGGTGGAGAGATaGCGCCAGTGTGTCTCATCAGGGAGCTGTAGGAGAGGAGGGGAC +
Preference number: 5 (lower is better)
Translates to: RPVGIHPHFHQEVER*RQCVSSGSCRRGGD
Trigger: GTCCCCTCCTCTCCTACAGCTCCCTGATGAGACACACTGGCGGCATCTCTCCACCTCCTGATGGAAGTGAGGGTGGATCCCCACTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 90 bp GCTGGGGGTGCAAGGAGTTGGAAGACTCGGTCAGGCAAGCGCTGTTaGTCTCCAGAGCTTGAGAGGCCAGTGGGGATCCACCCTCACTTC +
Preference number: 5 (lower is better)
Translates to: AGGARSWKTRSGKRC*SPELERPVGIHPHF
Trigger: GAAGTGAGGGTGGATCCCCACTGGCCTCTCAAGCTCTGGAGAGCAACAGCGCTTGCCTGACCGAGTCTTCCAACTCCTTGCACCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 90 bp GGAGTCTTCATGGAGGGCCAGATAGGGCTCGGAGATGTAGTGCTGTaGGGAAGGATGCTGGCCCTGCTGGGGGTGCAAGGAGTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: GVFMEGQIGLGDVVL*GRMLALLGVQGVGR
Trigger: TCTTCCAACTCCTTGCACCCCCAGCAGGGCCAGCATCCTTCCCCACAGCACTACATCTCCGAGCCCTATCTGGCCCTCCATGAAGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS-3UTR CAA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGAGGTCCACGTGGGTGTaGAAGTGGGTTCCCGCAGTG +
Preference number: 5 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGRSTWV*KWVPAV
Trigger: CACTGCGGGAACCCACTTCAACACCCACGTGGACCT...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS TCA 90 bp GCTCATCGCTGGAGTCTCGGGTCATGGCCTCCGTCCGGCTCCTTTTaGTGGTTGCCCTTCGAAGCACTTCCAAGGCTGATGTTCCCGAGT +
Preference number: 5 (lower is better)
Translates to: AHRWSLGSWPPSGSF*WLPFEALPRLMFPS
Trigger: ACTCGGGAACATCAGCCTTGGAAGTGCTTCGAAGGGCAACCATCAAAAGGAGCCGGACGGAGGCCATGACCCGAGACTCCAGCGATGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
ENSMUST00000238369.2
CDS TCA 90 bp AACGTAGGCCAGGTCAGTGCCACAGCGCTCACTCTCATTCTGCCCTaGGGGTGCAGTGGTGTCAGGCTCACAACCCTTCTCACCGAGACA +
Preference number: 5 (lower is better)
Translates to: NVGQVSATALTLILP*GCSGVRLTTLLTET
Trigger: TGTCTCGGTGAGAAGGGTTGTGAGCCTGACACCACTGCACCCTCAGGGCAGAATGAGAGTGAGCGCTGTGGCACTGACCTGGCCTACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 90 bp GTTCTGGGGACTCCCAGTCGGCCTGGGTCCCTCGCTCTTCAGAATTaGAGCGGGAGACATCTGGAGAGAGGAGGTGCTTTCGTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: VLGTPSRPGSLALQN*SGRHLERGGAFVLW
Trigger: CCAAAGAACGAAAGCACCTCCTCTCTCCAGATGTCTCCCGCTGCAATTCTGAAGAGCGAGGGACCCAGGCCGACTGGGAGTCCCCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 90 bp CTGGATTGGGTCACAGTTTCCATGACAGGATCTAGGCAGCCACGGTaGCTCCCGTTTGCCCAAGGACAAGGGGCTCCTCTGGTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: LDWVTVSMTGSRQPR*LPFAQGQGAPLVVQ
Trigger: CTGGACAACCAGAGGAGCCCCTTGTCCTTGGGCAAACGGGAGCCACCGTGGCTGCCTAGATCCTGTCATGGAAACTGTGACCCAATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 90 bp CCAGAGCCCCTGGGGACCATCAGACTGTTGGTCCTCCTTAAGTCCTaGGTTCTCTCCTCTTCGTGGATGGTCGGCTCTTTGCTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: PEPLGTIRLLVLLKS*VLSSSWMVGSLLLW
Trigger: CCACAGGAGCAAAGAGCCGACCATCCACGAAGAGGAGAGAACCCAGGACTTAAGGAGGACCAACAGTCTGATGGTCCCCAGGGGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 90 bp GCCTTGTCCATGTTGGCTGTCATGCAGGAGAGATCCGGTTCACTCTaGCTAATGCCCCGGCCCACATCCAGCTGTACGTCCCCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: ALSMLAVMQERSGSL*LMPRPTSSCTSPRR
Trigger: CCTTCTTGGGGACGTACAGCTGGATGTGGGCCGGGGCATTAGCCAGAGTGAACCGGATCTCTCCTGCATGACAGCCAACATGGACAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS-3UTR CAA 90 bp GGGAAAGCAAGCCCCAAGATAATGCATGAGATGCTGCTGCGGTTGCCCCTGGGGGTCAGGTCAGAGGCTTaGGGCATGGGCACAAGCAGA +
Preference number: 5 (lower is better)
Translates to: GKASPKIMHEMLLRLPLGVRSEA*GMGTSR
Trigger: TCTGCTTGTGCCCATGCCCAAAGCCTCTGACCTGAC...CCCCAGGGGCAACCGCAGCAGCATCTCATGCATTATCTTGGGGCTTGCTTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGGAGGGGACGAGGCTTaGGTGGCACAGGTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: QALIARRESSGQLQGRRLGGDEA*VAQVGA
Trigger: AGCTCCCACCTGTGCCACCAAAGCCTCGTCCCCTCC...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGCGGGACGGGGGTTCCTaGTCGGTTCCTGCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: QALIARRESSGQLQGRRLRDGGS*SVPALV
Trigger: GACCAGAGCAGGAACCGACAAGGAACCCCCGTCCCG...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS GCA 90 bp CCTCGCTCTTCAGAATTGCAGCGGGAGACATCTGGAGAGAGGAGGTaGTTTCGTTCTTTGGATCGGCCTCTCTCCCTGCCTCCTGATCGG +
Preference number: 5 (lower is better)
Translates to: PRSSELQRETSGERR*FRSLDRPLSLPPDR
Trigger: CCGATCAGGAGGCAGGGAGAGAGGCCGATCCAAAGAACGAAAGCACCTCCTCTCTCCAGATGTCTCCCGCTGCAATTCTGAAGAGCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 90 bp GGGGCCTCCTCTTTGTTGAGGGCTTCTTGGCTAGACATTTGCATGTaGCTCCTCAGCTGGCTGGTGCGTTGTTCCCACACAGACATGTGG +
Preference number: 5 (lower is better)
Translates to: GASSLLRASWLDICM*LLSWLVRCSHTDMW
Trigger: CCACATGTCTGTGTGGGAACAACGCACCAGCCAGCTGAGGAGGCACATGCAAATGTCTAGCCAAGAAGCCCTCAACAAAGAGGAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 90 bp ATTGGCGGGGCCTCCTCTTTGTTGAGGGCTTCTTGGCTAGACATTTaGATGTGCCTCCTCAGCTGGCTGGTGCGTTGTTCCCACACAGAC +
Preference number: 5 (lower is better)
Translates to: IGGASSLLRASWLDI*MCLLSWLVRCSHTD
Trigger: GTCTGTGTGGGAACAACGCACCAGCCAGCTGAGGAGGCACATGCAAATGTCTAGCCAAGAAGCCCTCAACAAAGAGGAGGCCCCGCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 90 bp CTCCGCTCCCTCAGGTGGCTGCTGCGTGGCTCCCACATCGACATGTaGTGTCTTCTCCTTCTGTCTCTTTCAATGGAAGGCATGTTGGGA +
Preference number: 5 (lower is better)
Translates to: LRSLRWLLRGSHIDM*CLLLLSLSMEGMLG
Trigger: TCCCAACATGCCTTCCATTGAAAGAGACAGAAGGAGAAGACACCACATGTCGATGTGGGAGCCACGCAGCAGCCACCTGAGGGAGCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 90 bp TTGAGGGGGTTCATTGGCGGGGCCTCCTCTTTGTTGAGGGCTTCTTaGCTAGACATTTGCATGTGCCTCCTCAGCTGGCTGGTGCGTTGT +
Preference number: 5 (lower is better)
Translates to: LRGFIGGASSLLRAS*LDICMCLLSWLVRC
Trigger: ACAACGCACCAGCCAGCTGAGGAGGCACATGCAAATGTCTAGCCAAGAAGCCCTCAACAAAGAGGAGGCCCCGCCAATGAACCCCCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS-3UTR CAA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACGGAGGGGACGAGGCTTaGGTGGCACAGGTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYGGDEA*VAQVGA
Trigger: AGCTCCCACCTGTGCCACCAAAGCCTCGTCCCCTCC...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS TCA 90 bp GAGGAGGTGCTTTCGTTCTTTGGATCGGCCTCTCTCCCTGCCTCCTaGTCGGTGAGTGTCAGACTTGTGACCAGAGTCAGAATTCAGGCG +
Preference number: 5 (lower is better)
Translates to: EEVLSFFGSASLPAS*SVSVRLVTRVRIQA
Trigger: CGCCTGAATTCTGACTCTGGTCACAAGTCTGACACTCACCGATCAGGAGGCAGGGAGAGAGGCCGATCCAAAGAACGAAAGCACCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 90 bp TCCTTAAGTCCTGGGTTCTCTCCTCTTCGTGGATGGTCGGCTCTTTaGTCCTGTGGCTGCTGTGAGGCTCATGTTCCTTCTCCCCCTCAA +
Preference number: 5 (lower is better)
Translates to: SLSPGFSPLRGWSAL*SCGCCEAHVPSPPQ
Trigger: TTGAGGGGGAGAAGGAACATGAGCCTCACAGCAGCCACAGGAGCAAAGAGCCGACCATCCACGAAGAGGAGAGAACCCAGGACTTAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS-3UTR CAA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGTGGGGGTGCAAGGAGTaGGAAGACTCGGTCAGGCAA +
Preference number: 5 (lower is better)
Translates to: QALIARRESSGQLQGRRLWGCKE*EDSVRQ
Trigger: TTGCCTGACCGAGTCTTCCAACTCCTTGCACCCCCA...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS TCA 90 bp GTGAGTGTCAGACTTGTGACCAGAGTCAGAATTCAGGCGGTGTGCTaGCAGCCTCAGGGAGGAATGGTAACTTCTGCGCCGCGACTTGTA +
Preference number: 5 (lower is better)
Translates to: VSVRLVTRVRIQAVC*QPQGGMVTSAPRLV
Trigger: TACAAGTCGCGGCGCAGAAGTTACCATTCCTCCCTGAGGCTGTCAGCACACCGCCTGAATTCTGACTCTGGTCACAAGTCTGACACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 90 bp CTGGAGAGAGGAGGTGCTTTCGTTCTTTGGATCGGCCTCTCTCCCTaGCTCCTGATCGGTGAGTGTCAGACTTGTGACCAGAGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: LERGGAFVLWIGLSP*LLIGECQTCDQSQN
Trigger: ATTCTGACTCTGGTCACAAGTCTGACACTCACCGATCAGGAGGCAGGGAGAGAGGCCGATCCAAAGAACGAAAGCACCTCCTCTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS-3UTR CAA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGTCCTCCTGCTCATCCTaGGTCAGTTCCTGGGCATTG +
Preference number: 5 (lower is better)
Translates to: QALIARRESSGQLQGRRLSSCSS*VSSWAL
Trigger: CAATGCCCAGGAACTGACCAAGGATGAGCAGGAGGA...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTATCGGGCTGACCTCCTaGGCCTTCTGCAGTGCATGT +
Preference number: 5 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSIGLTS*AFCSAC
Trigger: ACATGCACTGCAGAAGGCCAAGGAGGTCAGCCCGAT...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTCAGCTGGCTGGTGCGTaGTTCCCACACAGACATGTG +
Preference number: 5 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSQLAGA*FPHRHV
Trigger: CACATGTCTGTGTGGGAACAACGCACCAGCCAGCTG...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTGGGGCCTCCTCTTTGTaGAGGGCTTCTTGGCTAGAC +
Preference number: 5 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSGASSL*RASWLD
Trigger: GTCTAGCCAAGAAGCCCTCAACAAAGAGGAGGCCCC...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTAGTGGGTTGAGTGGATaGAGGGGGTTCATTGGCGGG +
Preference number: 5 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSSGLSG*RGFIGG
Trigger: CCCGCCAATGAACCCCCTCAATCCACTCAACCCACT...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAGCAGAGGCAGAGTCCTaGCCCTCAGTCCTGACTCGG +
Preference number: 5 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLAEAES*PSVLTR
Trigger: CCGAGTCAGGACTGAGGGCAAGGACTCTGCCTCTGC...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTAGCTTGGGCAAGCGCTaGATGGTTTTCAGTGGCCGC +
Preference number: 5 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSSLGKR*MVFSGR
Trigger: GCGGCCACTGAAAACCATCAAGCGCTTGCCCAAGCT...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGAACACAGCCTTCAGCTaGGGCAAGCGCTTGATGGTT +
Preference number: 5 (lower is better)
Translates to: FQCVGLQSHGERPVQRPENTAFS*GKRLMV
Trigger: AACCATCAAGCGCTTGCCCAAGCTGAAGGCTGTGTT...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTATGCGGTTGCTGCGACTaGGGCCTCTGTCCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLCGCCD*GLCPPL
Trigger: CAGAGGAGGACAGAGGCCCAAGTCGCAGCAACCGCA...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAGGCGACGGCTTCGTCTaGGGGTGCTGGTGTCGGAAA +
Preference number: 5 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEGDGFV*GCWCRK
Trigger: TTTCCGACACCAGCACCCCAAGACGAAGCCGTCGCC...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTTGGGGGTGCAAGGAGTaGGAAGACTCGGTCAGGCAA +
Preference number: 5 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSWGCKE*EDSVRQ
Trigger: TTGCCTGACCGAGTCTTCCAACTCCTTGCACCCCCA...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS TCA 90 bp CCACTTTGGAGGGACATCTCTTGCCGAGGCCTAGCGGTGGTGACATaGGAGTCAGCATTTCATACATCTCAGTGTAATGGATGCGGCCAC +
Preference number: 5 (lower is better)
Translates to: PLWRDISCRGLAVVT*ESAFHTSQCNGCGH
Trigger: GTGGCCGCATCCATTACACTGAGATGTATGAAATGCTGACTCTCATGTCACCACCGCTAGGCCTCGGCAAGAGATGTCCCTCCAAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 90 bp AATTCAGGCGGTGTGCTGACAGCCTCAGGGAGGAATGGTAACTTCTaGGCCGCGACTTGTAAGTGTTTTCACTGCTGCGTTCCATGGAGA +
Preference number: 5 (lower is better)
Translates to: NSGGVLTASGRNGNF*AATCKCFHCCVPWR
Trigger: TCTCCATGGAACGCAGCAGTGAAAACACTTACAAGTCGCGGCGCAGAAGTTACCATTCCTCCCTGAGGCTGTCAGCACACCGCCTGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS-3UTR CAA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGTTCTTGGCTAGACATTaGCATGTGCCTCCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: FQCVGLQSHGERPVQRPEFLARH*HVPPQL
Trigger: CAGCTGAGGAGGCACATGCAAATGTCTAGCCAAGAA...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGCACGGTGGCTCCCGTTaGCCCAAGGACAAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: HLDLTISGCANMQQNKDSHGGSR*PKDKGL
Trigger: GAGCCCCTTGTCCTTGGGCAAACGGGAGCCACCGTG...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCCACGGTGGCTCCCGTTaGCCCAAGGACAAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSHGGSR*PKDKGL
Trigger: GAGCCCCTTGTCCTTGGGCAAACGGGAGCCACCGTG...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAATTGGAGGGACATCTCTaGCCGAGGCCTAGCGGTGGT +
Preference number: 5 (lower is better)
Translates to: HCGHSPATNTEFLLCLLELEGHL*PRPSGG
Trigger: ACCACCGCTAGGCCTCGGCAAGAGATGTCCCTCCAA...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTACTCCCAGGACGAGGTaGAGAACAAAGAAGGATCCG +
Preference number: 5 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSTPRTR*RTKKDP
Trigger: CGGATCCTTCTTTGTTCTCAACCTCGTCCTGGGAGT...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACTCAATGGAAGGCATGTaGGGAGCAGACATCGGGCTG +
Preference number: 5 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYSMEGM*GADIGL
Trigger: CAGCCCGATGTCTGCTCCCAACATGCCTTCCATTGA...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAGTCCCCAAGAAGGGCTaGTTCACTGCTGCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEVPKKG*FTAAFS
Trigger: GCTGAAGGCAGCAGTGAACAAGCCCTTCTTGGGGAC...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGTTGGTTCTGATTGCATaGGCCAGAGCAAATGCTACC +
Preference number: 5 (lower is better)
Translates to: FQCVGLQSHGERPVQRPELVLIA*ARANAT
Trigger: GGTAGCATTTGCTCTGGCCAATGCAATCAGAACCAA...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004214.15
CDS-3UTR CAA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAATGCGGTTGCTGCGACTaGGGCCTCTGTCCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIECGCCD*GLCPPL
Trigger: CAGAGGAGGACAGAGGCCCAAGTCGCAGCAACCGCA...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAGTCAGGTCAGAGGCTTaGGGCATGGGCACAAGCAGA +
Preference number: 5 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLVRSEA*GMGTSR
Trigger: TCTGCTTGTGCCCATGCCCAAAGCCTCTGACCTGAC...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCCTCGCTCTTCAGAATaGCAGCGGGAGACATCTGGA +
Preference number: 5 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSPRSSE*QRETSG
Trigger: TCCAGATGTCTCCCGCTGCAATTCTGAAGAGCGAGG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS GCA 90 bp CCCCTTGTTGGTTCCCAAAGCGTTCGCCAGAGCAAATGCTACCAATaGACCAACCACTACTACAAAGTCCAGGATGTTCCAGAGGTCTCT +
Preference number: 5 (lower is better)
Translates to: PLVGSQSVRQSKCYQ*TNHYYKVQDVPEVS
Trigger: AGAGACCTCTGGAACATCCTGGACTTTGTAGTAGTGGTTGGTGCATTGGTAGCATTTGCTCTGGCGAACGCTTTGGGAACCAACAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS-3UTR CAA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTATTCTCGCTCAATCTGTaGCTGGCGCCGGAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLFSLNL*LAPELH
Trigger: ATGAAGCTCCGGCGCCAGCAACAGATTGAGCGAGAA...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTGATCCAGTAAAAGACTaGGGACTTGACCATGTGGCG +
Preference number: 5 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSDPVKD*GLDHVA
Trigger: CGCCACATGGTCAAGTCCCAAGTCTTTTACTGGATC...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGAGTGCATGTTTCTGGTaGAAGGCTTCTTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: QALIARRESSGQLQGRRLSACFW*KASSSS
Trigger: GGAGGAAGAAGAAGCCTTCAACCAGAAACATGCACT...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCAACACAGCCTTCAGCTaGGGCAAGCGCTTGATGGTT +
Preference number: 5 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSNTAFS*GKRLMV
Trigger: AACCATCAAGCGCTTGCCCAAGCTGAAGGCTGTGTT...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CAGGCTCTGATAGCTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGCAGATCCAACATCTTTaGGGACAGGTGAGGCCAAAT +
Preference number: 5 (lower is better)
Translates to: QALIARRESSGQLQGRRLQIQHL*GQVRPN
Trigger: ATTTGGCCTCACCTGTCCCAAAAGATGTTGGATCTG...CAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAGCTATCAGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TTTCAGTGTGTTGGTCTCCAGTCTCATGGAGAGCGTCCTGTGCAGAGGCCAGAGTACCACCAGAGATTGTaGTTCCTGGAATTGTCCATC +
Preference number: 5 (lower is better)
Translates to: FQCVGLQSHGERPVQRPEYHQRL*FLELSI
Trigger: GATGGACAATTCCAGGAACAACAATCTCTGGTGGTA...CTCTGGCCTCTGCACAGGACGCTCTCCATGAGACTGGAGACCAACACACTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCCCAGTCTTCGAGACATaGGGGTCTTGTCATCCTCAG +
Preference number: 5 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSPVFET*GSCHPQ
Trigger: CTGAGGATGACAAGACCCCAATGTCTCGAAGACTGG...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS GCA 90 bp GATATCCCTCCCCTTGTTGGTTCCCAAAGCGTTCGCCAGAGCAAATaGTACCAATGCACCAACCACTACTACAAAGTCCAGGATGTTCCA +
Preference number: 5 (lower is better)
Translates to: DIPPLVGSQSVRQSK*YQCTNHYYKVQDVP
Trigger: TGGAACATCCTGGACTTTGTAGTAGTGGTTGGTGCATTGGTAGCATTTGCTCTGGCGAACGCTTTGGGAACCAACAAGGGGAGGGATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS-3UTR CAA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGTCCGTCCGGCTCCTTTaGATGGTTGCCCTTCGAAGC +
Preference number: 5 (lower is better)
Translates to: HLDLTISGCANMQQNKDSSVRLL*MVALRS
Trigger: GCTTCGAAGGGCAACCATCAAAAGGAGCCGGACGGA...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTATCGGGCTGACCTCCTaGGCCTTCTGCAGTGCATGT +
Preference number: 5 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCIGLTS*AFCSAC
Trigger: ACATGCACTGCAGAAGGCCAAGGAGGTCAGCCCGAT...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCCAGCTGGCTGGTGCGTaGTTCCCACACAGACATGTG +
Preference number: 5 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIQLAGA*FPHRHV
Trigger: CACATGTCTGTGTGGGAACAACGCACCAGCCAGCTG...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GGATCCAAACGAGCATTTATGTTACAGGATATCCACCTGACCAACATGCACTGTGGGGCCTCCTCTTTGTaGAGGGCTTCTTGGCTAGAC +
Preference number: 5 (lower is better)
Translates to: GSKRAFMLQDIHLTNMHCGASSL*RASWLD
Trigger: GTCTAGCCAAGAAGCCCTCAACAAAGAGGAGGCCCC...ACAGTGCATGTTGGTCAGGTGGATATCCTGTAACATAAATGCTCGTTTGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCAGTGGGTTGAGTGGATaGAGGGGGTTCATTGGCGGG +
Preference number: 5 (lower is better)
Translates to: GRALNFPLDPIPCSFSKISGLSG*RGFIGG
Trigger: CCCGCCAATGAACCCCCTCAATCCACTCAACCCACT...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAAGTCCCCAAGAAGGGCTaGTTCACTGCTGCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEVPKKG*FTAAFS
Trigger: GCTGAAGGCAGCAGTGAACAAGCCCTTCTTGGGGAC...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAAAGCTTGGGCAAGCGCTaGATGGTTTTCAGTGGCCGC +
Preference number: 5 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIESLGKR*MVFSGR
Trigger: GCGGCCACTGAAAACCATCAAGCGCTTGCCCAAGCT...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATTTGGAGGGACATCTCTaGCCGAGGCCTAGCGGTGGT +
Preference number: 5 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNLEGHL*PRPSGG
Trigger: ACCACCGCTAGGCCTCGGCAAGAGATGTCCCTCCAA...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAATGGGTGATCCCGTCATaGGGGCCGATCCAGTCCTTA +
Preference number: 5 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEWVIPS*GPIQSL
Trigger: TAAGGACTGGATCGGCCCCAATGACGGGATCACCCA...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS GCA 90 bp CCCCTTGTTGGTTCTGATTGCATTGGCCAGAGCAAATGCTACCAATaGACCAACCACTACTACAAAGTCCAGGATGTTCCAGAGGTCTCT +
Preference number: 5 (lower is better)
Translates to: PLVGSDCIGQSKCYQ*TNHYYKVQDVPEVS
Trigger: AGAGACCTCTGGAACATCCTGGACTTTGTAGTAGTGGTTGGTGCATTGGTAGCATTTGCTCTGGCCAATGCAATCAGAACCAACAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004214.15
CDS-3UTR CAA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAATGGGAGCGAATGCCATaGTACATCACCTCATTCCAG +
Preference number: 5 (lower is better)
Translates to: HCGHSPATNTEFLLCLLEWERMP*YITSFQ
Trigger: CTGGAATGAGGTGATGTACAATGGCATTCGCTCCCA...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCTCCTCCTGCTCATCCTaGGTCAGTTCCTGGGCATTG +
Preference number: 5 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSSSCSS*VSSWAL
Trigger: CAATGCCCAGGAACTGACCAAGGATGAGCAGGAGGA...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGTTCTTGGCTAGACATTaGCATGTGCCTCCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMFLARH*HVPPQL
Trigger: CAGCTGAGGAGGCACATGCAAATGTCTAGCCAAGAA...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCCAGCCTCCTGCTGGATaGGGTCACAGTTTCCATGAC +
Preference number: 5 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSQPPAG*GHSFHD
Trigger: GTCATGGAAACTGTGACCCAATCCAGCAGGAGGCTG...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCCAGCCTCCTGCTGGATaGGGTCACAGTTTCCATGAC +
Preference number: 5 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIQPPAG*GHSFHD
Trigger: GTCATGGAAACTGTGACCCAATCCAGCAGGAGGCTG...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCGGGAGAGTGGACTCATaGAAGGGTATCCACTCCGAC +
Preference number: 5 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSGRVDS*KGIHSD
Trigger: GTCGGAGTGGATACCCTTCAATGAGTCCACTCTCCC...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTTACCACCAGAGATTGTaGTTCCTGGAATTGTCCATC +
Preference number: 5 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSYHQRL*FLELSI
Trigger: GATGGACAATTCCAGGAACAACAATCTCTGGTGGTA...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAACCTCGCTCTTCAGAATaGCAGCGGGAGACATCTGGA +
Preference number: 5 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEPRSSE*QRETSG
Trigger: TCCAGATGTCTCCCGCTGCAATTCTGAAGAGCGAGG...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAACGGACTGGTATGGGGTaGTACAAAGCCATAGTCCGC +
Preference number: 5 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIERTGMG*YKAIVR
Trigger: GCGGACTATGGCTTTGTACAACCCCATACCAGTCCG...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TGGAACCTTAAGAGAAAAGGCATGCCCAAACACAAGCGCAGTCATACCACCTCCATGAACAGGGATCTGTaGACCGTGAAACAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: WNLKRKGMPKHKRSHTTSMNRDL*TVKQFC
Trigger: GCAGAACTGTTTCACGGTCAACAGATCCCTGTTCAT...GGAGGTGGTATGACTGCGCTTGTGTTTGGGCATGCCTTTTCTCTTAAGGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TACCCTTACAAGAGCTACAGGCACCTTTGTGGGCCCTGGAGAACCTCCTTTTCTCAATCGATGAGCTTCTaGGCGTATTTCCTGACAATG +
Preference number: 5 (lower is better)
Translates to: YPYKSYRHLCGPWRTSFSQSMSF*AYFLTM
Trigger: CATTGTCAGGAAATACGCCAAGAAGCTCATCGATTG...AGAAAAGGAGGTTCTCCAGGGCCCACAAAGGTGCCTGTAGCTCTTGTAAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CTCTGCGTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACCCTAGAGCCACAATTTaGATCCCAGCTTCAAAGCAG +
Preference number: 5 (lower is better)
Translates to: LCVSGDNLIPSHCPPFLYPRATI*IPASKQ
Trigger: CTGCTTTGAAGCTGGGATCAAAATTGTGGCTCTAGG...GTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATACGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAAACGGCAAAAAGGATGTaGTCAAACTGGGTGATCCCG +
Preference number: 5 (lower is better)
Translates to: HCGHSPATNTEFLLCLLETAKRM*SNWVIP
Trigger: CGGGATCACCCAGTTTGACAACATCCTTTTTGCCGT...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS GCA 90 bp GATATCCCTCCCCTTGTTGGTTCTGATTGCATTGGCCAGAGCAAATaGTACCAATGCACCAACCACTACTACAAAGTCCAGGATGTTCCA +
Preference number: 5 (lower is better)
Translates to: DIPPLVGSDCIGQSK*YQCTNHYYKVQDVP
Trigger: TGGAACATCCTGGACTTTGTAGTAGTGGTTGGTGCATTGGTAGCATTTGCTCTGGCCAATGCAATCAGAACCAACAAGGGGAGGGATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004214.15
CDS-3UTR CAA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGAAGGCATCATTGGTATaGTACAGCACAGTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMKASLV*YSTVVH
Trigger: GTGGACCACTGTGCTGTACAATACCAATGATGCCTT...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAAAGGCATCATTGGTATaGTACAGCACAGTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLKASLV*YSTVVH
Trigger: GTGGACCACTGTGCTGTACAATACCAATGATGCCTT...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCACTCCCAGGACGAGGTaGAGAACAAAGAAGGATCCG +
Preference number: 5 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSTPRTR*RTKKDP
Trigger: CGGATCCTTCTTTGTTCTCAACCTCGTCCTGGGAGT...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TTGAGGAAGGGTCCTAAGTTCCCTTGGTGTTTCTGGTTTGGGGGATTAGGAATGACTCTCTCTCTTTCTTaGGCAAATTCCCCGGAAAGC +
Preference number: 5 (lower is better)
Translates to: LRKGPKFPWCFWFGGLGMTLSLS*ANSPES
Trigger: GCTTTCCGGGGAATTTGCCAAAGAAAGAGAGAGAGT...CATTCCTAATCCCCCAAACCAGAAACACCAAGGGAACTTAGGACCCTTCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATTTCTCGCTCAATCTGTaGCTGGCGCCGGAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNFSLNL*LAPELH
Trigger: ATGAAGCTCCGGCGCCAGCAACAGATTGAGCGAGAA...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCGCAGAGGCAGAGTCCTaGCCCTCAGTCCTGACTCGG +
Preference number: 5 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIAEAES*PSVLTR
Trigger: CCGAGTCAGGACTGAGGGCAAGGACTCTGCCTCTGC...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATGGGAGAGTGGACTCATaGAAGGGTATCCACTCCGAC +
Preference number: 5 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNGRVDS*KGIHSD
Trigger: GTCGGAGTGGATACCCTTCAATGAGTCCACTCTCCC...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCGGCGACGGCTTCGTCTaGGGGTGCTGGTGTCGGAAA +
Preference number: 5 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIGDGFV*GCWCRK
Trigger: TTTCCGACACCAGCACCCCAAGACGAAGCCGTCGCC...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS GCA 90 bp CTGCTTCTTCTTCTTCTCTACCTCTTCTTCTTCCTCTTTAGTCTCTaGCTCCTTCAAGGGACTGGCTTCTCCATCCGTCTTGTTGCTAAT +
Preference number: 5 (lower is better)
Translates to: LLLLLLYLFFFLFSL*LLQGTGFSIRLVAN
Trigger: ATTAGCAACAAGACGGATGGAGAAGCCAGTCCCTTGAAGGAGGCAGAGACTAAAGAGGAAGAAGAAGAGGTAGAGAAGAAGAAGAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 90 bp CTATGGGGCACCATGGCTTTTCCAGTCTCTCGCTTCTCCTTCTTCTaGTTCTTCTTCTTCTCTACCTCTTCTTCTTCCTCTTTAGTCTCT +
Preference number: 5 (lower is better)
Translates to: LWGTMAFPVSRFSFF*FFFFSTSSSSSLVS
Trigger: AGAGACTAAAGAGGAAGAAGAAGAGGTAGAGAAGAAGAAGAAGCAGAAGAAGGAGAAGCGAGAGACTGGAAAAGCCATGGTGCCCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS-3UTR CAA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCGATCCAGTAAAAGACTaGGGACTTGACCATGTGGCG +
Preference number: 5 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIDPVKD*GLDHVA
Trigger: CGCCACATGGTCAAGTCCCAAGTCTTTTACTGGATC...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp TTCTCCTGCTATTTCAACTCTTCCCTCATTAAGATGCTGGAAAGTCTTCCCAGCTGGGAGCGAATGCCATaGTACATCACCTCATTCCAG +
Preference number: 5 (lower is better)
Translates to: FSCYFNSSLIKMLESLPSWERMP*YITSFQ
Trigger: CTGGAATGAGGTGATGTACAATGGCATTCGCTCCCA...GCTGGGAAGACTTTCCAGCATCTTAATGAGGGAAGAGTTGAAATAGCAGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CTAGGAGGGAAAGCTCTGGTCAGCTACAAGGAAGGAGGTTGGCATTCAAGTTTAAGAGACTTGATAGTCTaGATATCCCTCCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LGGKALVSYKEGGWHSSLRDLIV*ISLPLL
Trigger: CAACAAGGGGAGGGATATCAAGACTATCAAGTCTCT...TAAACTTGAATGCCAACCTCCTTCCTTGTAGCTGACCAGAGCTTTCCCTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAACTGGTGTTCACCAGCTaGCTATCTGTCAGGATAATT +
Preference number: 5 (lower is better)
Translates to: HCGHSPATNTEFLLCLLELVFTS*LSVRII
Trigger: AATTATCCTGACAGATAGCAAGCTGGTGAACACCAG...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CACTGTGGTCACAGCCCTGCCACCAACACTGAGTTCCTTTTATGTTTGTTGGAACTGCAGGATCAAGCCTaGGTCTATCATCTTTATAAC +
Preference number: 5 (lower is better)
Translates to: HCGHSPATNTEFLLCLLELQDQA*VYHLYN
Trigger: GTTATAAAGATGATAGACCAAGGCTTGATCCTGCAG...TTCCAACAAACATAAAAGGAACTCAGTGTTGGTGGCAGGGCTGTGACCACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGCCCTTCACCTCCATCTaGTTTTTCTCGTGGTCTACA +
Preference number: 5 (lower is better)
Translates to: HLDLTISGCANMQQNKDSPFTSI*FFSWST
Trigger: TGTAGACCACGAGAAAAACAAGATGGAGGTGAAGGG...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GGCAGAGCACTCAATTTCCCTCTTGATCCCATCCCATGTTCATTTTCTAAGATCCCCTTCACCTCCATCTaGTTTTTCTCGTGGTCTACA +
Preference number: 5 (lower is better)
Translates to: GRALNFPLDPIPCSFSKIPFTSI*FFSWST
Trigger: TGTAGACCACGAGAAAAACAAGATGGAGGTGAAGGG...GATCTTAGAAAATGAACATGGGATGGGATCAAGAGGGAAATTGAGTGCTCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGCTGTCTGCACCACCTTaGGCGATTTTAATGTCCAGA +
Preference number: 5 (lower is better)
Translates to: HLDLTISGCANMQQNKDSLSAPP*AILMSR
Trigger: TCTGGACATTAAAATCGCCAAAGGTGGTGCAGACAG...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAACTGTCTGCACCACCTTaGGCGATTTTAATGTCCAGA +
Preference number: 5 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIELSAPP*AILMSR
Trigger: TCTGGACATTAAAATCGCCAAAGGTGGTGCAGACAG...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS TCA 90 bp GCTGCTGTCTCTGTTTCTTTACCTTACTCTGTTTATAGTAGTCCATaGTCATCATTGCTGCATAGATCTTGCCCACAGTCAGGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: AAVSVSLPYSVYSSP*SSLLHRSCPQSGQR
Trigger: CCTCTGACCTGACTGTGGGCAAGATCTATGCAGCAATGATGATCATGGACTACTATAAACAGAGTAAGGTAAAGAAACAGAGACAGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS-3UTR CAA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATAGTGCATGTTTCTGGTaGAAGGCTTCTTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNSACFW*KASSSS
Trigger: GGAGGAAGAAGAAGCCTTCAACCAGAAACATGCACT...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCTCAATGGAAGGCATGTaGGGAGCAGACATCGGGCTG +
Preference number: 5 (lower is better)
Translates to: DPVIGITAVKVLSNLRKISMEGM*GADIGL
Trigger: CAGCCCGATGTCTGCTCCCAACATGCCTTCCATTGA...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAATTGATATCCCTCCCCTaGTTGGTTCTGATTGCATTG +
Preference number: 5 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIELISLP*LVLIAL
Trigger: CAATGCAATCAGAACCAACAAGGGGAGGGATATCAA...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004214.15
CDS-3UTR CAA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAAAGAGACTTGATAGTCTaGATATCCCTCCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIERDLIV*ISLPLL
Trigger: CAACAAGGGGAGGGATATCAAGACTATCAAGTCTCT...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp CACTTGGATTTAACCATCTCAGGGTGTGCTAACATGCAGCAAAACAAAGACTCGCTGGTGTTCACCAGCTaGCTATCTGTCAGGATAATT +
Preference number: 5 (lower is better)
Translates to: HLDLTISGCANMQQNKDSLVFTS*LSVRII
Trigger: AATTATCCTGACAGATAGCAAGCTGGTGAACACCAG...CGAGTCTTTGTTTTGCTGCATGTTAGCACACCCTGAGATGGTTAAATCCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GTATCAGGAGACAATCTGATTCCCTCCCACTGTCCACCTTTCCTTTACATAGAATTCAGAAAGCTCATATaGAAGCCACTGGTGTTCACC +
Preference number: 5 (lower is better)
Translates to: VSGDNLIPSHCPPFLYIEFRKLI*KPLVFT
Trigger: GGTGAACACCAGTGGCTTCAATATGAGCTTTCTGAA...TTCTATGTAAAGGAAAGGTGGACAGTGGGAGGGAATCAGATTGTCTCCTGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS GCA 90 bp ACAAAGTCCAGGATGTTCCAGAGGTCTCTGAAGTATGATCCATCCTaGAGGATCAAGCCTTGGTCTATCATCTTTATAACCATCTCAAAG +
Preference number: 5 (lower is better)
Translates to: TKSRMFQRSLKYDPS*RIKPWSIIFITISK
Trigger: CTTTGAGATGGTTATAAAGATGATAGACCAAGGCTTGATCCTGCAGGATGGATCATACTTCAGAGACCTCTGGAACATCCTGGACTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS-3UTR CAA 90 bp TTGTTGTTTTGGTGTCATGTGACTTCTCTGGGATACACACGACACAGACGAAATTTCAGAAAGCTCATATaGAAGCCACTGGTGTTCACC +
Preference number: 5 (lower is better)
Translates to: LLFWCHVTSLGYTRHRRNFRKLI*KPLVFT
Trigger: GGTGAACACCAGTGGCTTCAATATGAGCTTTCTGAA...ATTTCGTCTGTGTCGTGTGTATCCCAGAGAAGTCACATGACACCAAAACAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS-3UTR CAA 90 bp GACCCTGTTATAGGGATAACTGCAGTGAAAGTTCTTTCAAATCTCAGAAAAATCCGAGACATTGGGGTCTaGTCATCCTCAGGAAGATGC +
Preference number: 5 (lower is better)
Translates to: DPVIGITAVKVLSNLRKIRDIGV*SSSGRC
Trigger: GCATCTTCCTGAGGATGACAAGACCCCAATGTCTCG...GATTTTTCTGAGATTTGAAAGAACTTTCACTGCAGTTATCCCTATAACAGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187541.7
CDS CCA 90 bp AAGCAGAAGATCCCAATGAAATATGGTTCTGTCTTCTCTGATAAGTaGATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAA +
Preference number: 5 (lower is better)
Translates to: KQKIPMKYGSVFSDK*ILAQNLGYPRYKIQ
Trigger: TTGTATCTTATATCTTGGGTATCCTAGGTTTTGGGCTAATATCCACTTATCAGAGAAGACAGAACCATATTTCATTGGGATCTTCTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211821.2
CDS GCA 72 bp AGCCGGCCACCGCGGAGCGCGGGGAAGCAGGCAACATaGCCACCTCGTCGGAGGCATTGGCCTCGAGCAGGG +
Preference number: 6 (lower is better)
Translates to: SRPPRSAGKQAT*PPRRRHWPRAG
Trigger: CCCTGCTCGAGGCCAATGCCTCCGACGAGGTGGGCATGTTGCCTGCTTCCCCGCGCTCCGCGGTGGCCGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS CAA 72 bp CAGCCCGGGCCCTCGCCTTCCTGCACCGGGAAGAAGTaGTCGAAGCCGGCCACCGCGGAGCGCGGGGAAGCA +
Preference number: 6 (lower is better)
Translates to: QPGPSPSCTGKK*SKPATAERGEA
Trigger: TGCTTCCCCGCGCTCCGCGGTGGCCGGCTTCGACAACTTCTTCCCGGTGCAGGAAGGCGAGGGCCCGGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS CAA 90 bp GCGGAGCGCGGGGAAGCAGGCAACATGCCCACCTCGTCGGAGGCATaGGCCTCGAGCAGGGCGCACTGCTGCGGCCGCCATGCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: AERGEAGNMPTSSEA*ASSRAHCCGRHASS
Trigger: TGAGGAGGCATGGCGGCCGCAGCAGTGCGCCCTGCTCGAGGCCAATGCCTCCGACGAGGTGGGCATGTTGCCTGCTTCCCCGCGCTCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS GCA 72 bp GCCCCGAGGCCGGGACGGGGGTTCCTTGTCGGTTCCTaGTCTGGTCCGAGTCTCCATCGCCTGAGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: APRPGRGFLVGS*SGPSLHRLSLA
Trigger: GGCCAGGCTCAGGCGATGGAGACTCGGACCAGAGCAGGAACCGACAAGGAACCCCCGTCCCGGCCTCGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000187541.7
ENSMUST00000238369.2
CDS GCA 72 bp TCGTCGGAGGCATTGGCCTCGAGCAGGGCGCACTGCTaGGGCCGCCATGCCTCCTCATCAGGCAGAGCCAGG +
Preference number: 6 (lower is better)
Translates to: SSEALASSRAHC*GRHASSSGRAR
Trigger: CCTGGCTCTGCCTGATGAGGAGGCATGGCGGCCGCAGCAGTGCGCCCTGCTCGAGGCCAATGCCTCCGACGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS GCA 72 bp ACCTCGTCGGAGGCATTGGCCTCGAGCAGGGCGCACTaGTGCGGCCGCCATGCCTCCTCATCAGGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: TSSEALASSRAH*CGRHASSSGRA
Trigger: GGCTCTGCCTGATGAGGAGGCATGGCGGCCGCAGCAGTGCGCCCTGCTCGAGGCCAATGCCTCCGACGAGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS CCA 72 bp GGGAAGCAGGCAACATGCCCACCTCGTCGGAGGCATTaGCCTCGAGCAGGGCGCACTGCTGCGGCCGCCATG +
Preference number: 6 (lower is better)
Translates to: GKQATCPPRRRH*PRAGRTAAAAM
Trigger: CATGGCGGCCGCAGCAGTGCGCCCTGCTCGAGGCCAATGCCTCCGACGAGGTGGGCATGTTGCCTGCTTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS CCA 72 bp GAGGCCGGGACGGGGGTTCCTTGTCGGTTCCTGCTCTaGTCCGAGTCTCCATCGCCTGAGCCTGGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: EAGTGVPCRFLL*SESPSPEPGLP
Trigger: TGGCAGGCCAGGCTCAGGCGATGGAGACTCGGACCAGAGCAGGAACCGACAAGGAACCCCCGTCCCGGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000187541.7
ENSMUST00000238369.2
CDS CCA 72 bp GCCCGGAGGGTCCGCAGGTCCACGTGGGTGTTGAAGTaGGTTCCCGCAGTGGCCAGGATGCCACTAAGGACC +
Preference number: 6 (lower is better)
Translates to: ARRVRRSTWVLK*VPAVARMPLRT
Trigger: GGTCCTTAGTGGCATCCTGGCCACTGCGGGAACCCACTTCAACACCCACGTGGACCTGCGGACCCTCCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000187541.7
ENSMUST00000211821.2
ENSMUST00000238369.2
CDS CCA 72 bp AGGACACGCACAGCCCGGAGGGTCCGCAGGTCCACGTaGGTGTTGAAGTGGGTTCCCGCAGTGGCCAGGATG +
Preference number: 6 (lower is better)
Translates to: RTRTARRVRRST*VLKWVPAVARM
Trigger: CATCCTGGCCACTGCGGGAACCCACTTCAACACCCACGTGGACCTGCGGACCCTCCGGGCTGTGCGTGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000187541.7
ENSMUST00000211821.2
ENSMUST00000238369.2
CDS CCA 72 bp CGGGCCTGCGGGGTGCTCTGCATCTTGTGTGCCTCGTaGGCCTTGATGATGTCCCGCTGCTCGATGAGCCCC +
Preference number: 6 (lower is better)
Translates to: RACGVLCILCAS*ALMMSRCSMSP
Trigger: GGGGCTCATCGAGCAGCGGGACATCATCAAGGCCCACGAGGCACACAAGATGCAGAGCACCCCGCAGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS CAA 72 bp GGCTCCCGTTTGCCCAAGGACAAGGGGCTCCTCTGGTaGTCCAGGGCGCTAGTCAGGCCCCCTATGTCCCCC +
Preference number: 6 (lower is better)
Translates to: GSRLPKDKGLLW*SRALVRPPMSP
Trigger: GGGGGACATAGGGGGCCTGACTAGCGCCCTGGACAACCAGAGGAGCCCCTTGTCCTTGGGCAAACGGGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp CGCACAGCCCGGAGGGTCCGCAGGTCCACGTGGGTGTaGAAGTGGGTTCCCGCAGTGGCCAGGATGCCACTA +
Preference number: 6 (lower is better)
Translates to: RTARRVRRSTWV*KWVPAVARMPL
Trigger: TAGTGGCATCCTGGCCACTGCGGGAACCCACTTCAACACCCACGTGGACCTGCGGACCCTCCGGGCTGTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000187541.7
ENSMUST00000211821.2
ENSMUST00000238369.2
CDS CAA 90 bp GCCATCTCCCACTCCTTGCGCCGGGCCTGCGGGGTGCTCTGCATCTaGTGTGCCTCGTGGGCCTTGATGATGTCCCGCTGCTCGATGAGC +
Preference number: 6 (lower is better)
Translates to: AISHSLRRACGVLCI*CASWALMMSRCSMS
Trigger: GCTCATCGAGCAGCGGGACATCATCAAGGCCCACGAGGCACACAAGATGCAGAGCACCCCGCAGGCCCGGCGCAAGGAGTGGGAGATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS TCA 72 bp CCCTCAGTCCTGACTCGGCGATGCCGGCTTCGCCTCTaGCTCTGCCTGTGCCTGGCCCGGTCCTCAAAAGTC +
Preference number: 6 (lower is better)
Translates to: PSVLTRRCRLRL*LCLCLARSSKV
Trigger: GACTTTTGAGGACCGGGCCAGGCACAGGCAGAGTCAGAGGCGAAGCCGGCATCGCCGAGTCAGGACTGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS TCA 72 bp TTGTCGGTTCCTGCTCTGGTCCGAGTCTCCATCGCCTaGGCCTGGCCTGCCAACGACCACCGCCTCCCCGAA +
Preference number: 6 (lower is better)
Translates to: LSVPALVRVSIA*AWPANDHRLPE
Trigger: TTCGGGGAGGCGGTGGTCGTTGGCAGGCCAGGCTCAGGCGATGGAGACTCGGACCAGAGCAGGAACCGACAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000187541.7
ENSMUST00000238369.2
CDS GCA 72 bp CTTGCGCCGGGCCTGCGGGGTGCTCTGCATCTTGTGTaGCTCGTGGGCCTTGATGATGTCCCGCTGCTCGAT +
Preference number: 6 (lower is better)
Translates to: LAPGLRGALHLV*LVGLDDVPLLD
Trigger: ATCGAGCAGCGGGACATCATCAAGGCCCACGAGGCACACAAGATGCAGAGCACCCCGCAGGCCCGGCGCAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS CCA 72 bp GGTGGCTCCCGTTTGCCCAAGGACAAGGGGCTCCTCTaGTTGTCCAGGGCGCTAGTCAGGCCCCCTATGTCC +
Preference number: 6 (lower is better)
Translates to: GGSRLPKDKGLL*LSRALVRPPMS
Trigger: GGACATAGGGGGCCTGACTAGCGCCCTGGACAACCAGAGGAGCCCCTTGTCCTTGGGCAAACGGGAGCCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp ATCTCCCACTCCTTGCGCCGGGCCTGCGGGGTGCTCTaGATCTTGTGTGCCTCGTGGGCCTTGATGATGTCC +
Preference number: 6 (lower is better)
Translates to: ISHSLRRACGVL*ILCASWALMMS
Trigger: GGACATCATCAAGGCCCACGAGGCACACAAGATGCAGAGCACCCCGCAGGCCCGGCGCAAGGAGTGGGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238369.2
CDS CCA 72 bp CCCTCAACGGACACCCCTTCATCCAGACTCCGCTCCTaGCTGGCAGACCTGCTTCGGGATGCAGAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: PSTDTPSSRLRS*LADLLRDAEAE
Trigger: CTCTGCCTCTGCATCCCGAAGCAGGTCTGCCAGCCAGGAGCGGAGTCTGGATGAAGGGGTGTCCGTTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp CTGGACTGGCGACGTTCTGGGGACTCCCAGTCGGCCTaGGTCCCTCGCTCTTCAGAATTGCAGCGGGAGACA +
Preference number: 6 (lower is better)
Translates to: LDWRRSGDSQSA*VPRSSELQRET
Trigger: TGTCTCCCGCTGCAATTCTGAAGAGCGAGGGACCCAGGCCGACTGGGAGTCCCCAGAACGTCGCCAGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp GGGGAAGGATGCTGGCCCTGCTGGGGGTGCAAGGAGTaGGAAGACTCGGTCAGGCAAGCGCTGTTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: GEGCWPCWGCKE*EDSVRQALLLS
Trigger: GGAGAGCAACAGCGCTTGCCTGACCGAGTCTTCCAACTCCTTGCACCCCCAGCAGGGCCAGCATCCTTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 90 bp GGCATCTGCCAGCTGTGCCGTAGGGGTGGCGCAGAGCCAATGGTATaGGACCGGCCCAAGCTAGTGGCTACGGCTGCCTCAAAGGTGAGT +
Preference number: 6 (lower is better)
Translates to: GICQLCRRGGAEPMV*DRPKLVATAASKVS
Trigger: ACTCACCTTTGAGGCAGCCGTAGCCACTAGCTTGGGCCGGTCCAATACCATTGGCTCTGCGCCACCCCTACGGCACAGCTGGCAGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp CAACGGACACCCCTTCATCCAGACTCCGCTCCTGGCTaGCAGACCTGCTTCGGGATGCAGAGGCAGAGTCCT +
Preference number: 6 (lower is better)
Translates to: QRTPLHPDSAPG*QTCFGMQRQSP
Trigger: AGGACTCTGCCTCTGCATCCCGAAGCAGGTCTGCCAGCCAGGAGCGGAGTCTGGATGAAGGGGTGTCCGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp GGGAAGGATGCTGGCCCTGCTGGGGGTGCAAGGAGTTaGAAGACTCGGTCAGGCAAGCGCTGTTGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: GKDAGPAGGARS*KTRSGKRCCSP
Trigger: TGGAGAGCAACAGCGCTTGCCTGACCGAGTCTTCCAACTCCTTGCACCCCCAGCAGGGCCAGCATCCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS TCA 72 bp CCCCCAGCCTCCTGCTGGATTGGGTCACAGTTTCCATaGCAGGATCTAGGCAGCCACGGTGGCTCCCGTTTG +
Preference number: 6 (lower is better)
Translates to: PPASCWIGSQFP*QDLGSHGGSRL
Trigger: CAAACGGGAGCCACCGTGGCTGCCTAGATCCTGTCATGGAAACTGTGACCCAATCCAGCAGGAGGCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp TATTGGGGGTCTGTGACCTTCCTTCACTGGGTGACCTaGACTGGCGACGTTCTGGGGACTCCCAGTCGGCCT +
Preference number: 6 (lower is better)
Translates to: YWGSVTFLHWVT*TGDVLGTPSRP
Trigger: AGGCCGACTGGGAGTCCCCAGAACGTCGCCAGTCCAGGTCACCCAGTGAAGGAAGGTCACAGACCCCCAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS TCA 72 bp TGCCTCAAAGGTGAGTGTCTCCTCCTCGCCACAGTCTaGGGCGTGGGAGTCTTCATGGAGGGCCAGATAGGG +
Preference number: 6 (lower is better)
Translates to: CLKGECLLLATV*GVGVFMEGQIG
Trigger: CCCTATCTGGCCCTCCATGAAGACTCCCACGCCTCAGACTGTGGCGAGGAGGAGACACTCACCTTTGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp ACTCCCAGTCGGCCTGGGTCCCTCGCTCTTCAGAATTaGAGCGGGAGACATCTGGAGAGAGGAGGTGCTTTC +
Preference number: 6 (lower is better)
Translates to: TPSRPGSLALQN*SGRHLERGGAF
Trigger: GAAAGCACCTCCTCTCTCCAGATGTCTCCCGCTGCAATTCTGAAGAGCGAGGGACCCAGGCCGACTGGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp GTCACAGTTTCCATGACAGGATCTAGGCAGCCACGGTaGCTCCCGTTTGCCCAAGGACAAGGGGCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: VTVSMTGSRQPR*LPFAQGQGAPL
Trigger: CAGAGGAGCCCCTTGTCCTTGGGCAAACGGGAGCCACCGTGGCTGCCTAGATCCTGTCATGGAAACTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp CACAGCGCTCACTCTCATTCTGCCCTGAGGGTGCAGTaGTGTCAGGCTCACAACCCTTCTCACCGAGACAGG +
Preference number: 6 (lower is better)
Translates to: HSAHSHSALRVQ*CQAHNPSHRDR
Trigger: CCTGTCTCGGTGAGAAGGGTTGTGAGCCTGACACCACTGCACCCTCAGGGCAGAATGAGAGTGAGCGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp TACCCTGTCTATTGGGGGTCTGTGACCTTCCTTCACTaGGTGACCTGGACTGGCGACGTTCTGGGGACTCCC +
Preference number: 6 (lower is better)
Translates to: YPVYWGSVTFLH*VTWTGDVLGTP
Trigger: GGGAGTCCCCAGAACGTCGCCAGTCCAGGTCACCCAGTGAAGGAAGGTCACAGACCCCCAATAGACAGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp GCAAGCGCTGTTGCTCTCCAGAGCTTGAGAGGCCAGTaGGGATCCACCCTCACTTCCATCAGGAGGTGGAGA +
Preference number: 6 (lower is better)
Translates to: ASAVALQSLRGQ*GSTLTSIRRWR
Trigger: TCTCCACCTCCTGATGGAAGTGAGGGTGGATCCCCACTGGCCTCTCAAGCTCTGGAGAGCAACAGCGCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp GACTCCCAGTCGGCCTGGGTCCCTCGCTCTTCAGAATaGCAGCGGGAGACATCTGGAGAGAGGAGGTGCTTT +
Preference number: 6 (lower is better)
Translates to: DSQSAWVPRSSE*QRETSGERRCF
Trigger: AAAGCACCTCCTCTCTCCAGATGTCTCCCGCTGCAATTCTGAAGAGCGAGGGACCCAGGCCGACTGGGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 90 bp TGCTCATCGCTGGAGTCTCGGGTCATGGCCTCCGTCCGGCTCCTTTaGATGGTTGCCCTTCGAAGCACTTCCAAGGCTGATGTTCCCGAG +
Preference number: 6 (lower is better)
Translates to: CSSLESRVMASVRLL*MVALRSTSKADVPE
Trigger: CTCGGGAACATCAGCCTTGGAAGTGCTTCGAAGGGCAACCATCAAAAGGAGCCGGACGGAGGCCATGACCCGAGACTCCAGCGATGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
ENSMUST00000238369.2
CDS CAA 90 bp CGTTCTGGGGACTCCCAGTCGGCCTGGGTCCCTCGCTCTTCAGAATaGCAGCGGGAGACATCTGGAGAGAGGAGGTGCTTTCGTTCTTTG +
Preference number: 6 (lower is better)
Translates to: RSGDSQSAWVPRSSE*QRETSGERRCFRSL
Trigger: CAAAGAACGAAAGCACCTCCTCTCTCCAGATGTCTCCCGCTGCAATTCTGAAGAGCGAGGGACCCAGGCCGACTGGGAGTCCCCAGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 90 bp ATGGCGACCGTGACACTGGTGCTCTCCGTGGTAGCCTTGTCCATGTaGGCTGTCATGCAGGAGAGATCCGGTTCACTCTGGCTAATGCCC +
Preference number: 6 (lower is better)
Translates to: MATVTLVLSVVALSM*AVMQERSGSLWLMP
Trigger: GGGCATTAGCCAGAGTGAACCGGATCTCTCCTGCATGACAGCCAACATGGACAAGGCTACCACGGAGAGCACCAGTGTCACGGTCGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 90 bp ACATCAGGGATGGCGACCGTGACACTGGTGCTCTCCGTGGTAGCCTaGTCCATGTTGGCTGTCATGCAGGAGAGATCCGGTTCACTCTGG +
Preference number: 6 (lower is better)
Translates to: TSGMATVTLVLSVVA*SMLAVMQERSGSLW
Trigger: CCAGAGTGAACCGGATCTCTCCTGCATGACAGCCAACATGGACAAGGCTACCACGGAGAGCACCAGTGTCACGGTCGCCATCCCTGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp CCAAGAAGGGCTTGTTCACTGCTGCCTTCAGCCTCCTaGTCTGTCAGAGCTGCATCCTTCCCCACTTCCAGC +
Preference number: 6 (lower is better)
Translates to: PRRACSLLPSAS*SVRAASFPTSS
Trigger: GCTGGAAGTGGGGAAGGATGCAGCTCTGACAGAGCAGGAGGCTGAAGGCAGCAGTGAACAAGCCCTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp CCAGCTGTACGTCCCCAAGAAGGGCTTGTTCACTGCTaGCTTCAGCCTCCTGCTCTGTCAGAGCTGCATCCT +
Preference number: 6 (lower is better)
Translates to: PAVRPQEGLVHC*LQPPALSELHP
Trigger: AGGATGCAGCTCTGACAGAGCAGGAGGCTGAAGGCAGCAGTGAACAAGCCCTTCTTGGGGACGTACAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp GGGATCCACCCTCACTTCCATCAGGAGGTGGAGAGATaGCGCCAGTGTGTCTCATCAGGGAGCTGTAGGAGA +
Preference number: 6 (lower is better)
Translates to: GIHPHFHQEVER*RQCVSSGSCRR
Trigger: TCTCCTACAGCTCCCTGATGAGACACACTGGCGGCATCTCTCCACCTCCTGATGGAAGTGAGGGTGGATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp AATGGTATTGGACCGGCCCAAGCTAGTGGCTACGGCTaGCTCAAAGGTGAGTGTCTCCTCCTCGCCACAGTC +
Preference number: 6 (lower is better)
Translates to: NGIGPAQASGYG*LKGECLLLATV
Trigger: GACTGTGGCGAGGAGGAGACACTCACCTTTGAGGCAGCCGTAGCCACTAGCTTGGGCCGGTCCAATACCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp ACTTTTCAAGACCCAGACCTAGGGCTAGGCCCTCAATaGGCCTGGGCCTCCGATAAAGGCTGGGGTGAGCAT +
Preference number: 6 (lower is better)
Translates to: TFQDPDLGLGPQ*AWASDKGWGEH
Trigger: ATGCTCACCCCAGCCTTTATCGGAGGCCCAGGCCCATTGAGGGCCTAGCCCTAGGTCTGGGTCTTGAAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp ATGTTGGCTGTCATGCAGGAGAGATCCGGTTCACTCTaGCTAATGCCCCGGCCCACATCCAGCTGTACGTCC +
Preference number: 6 (lower is better)
Translates to: MLAVMQERSGSL*LMPRPTSSCTS
Trigger: GGACGTACAGCTGGATGTGGGCCGGGGCATTAGCCAGAGTGAACCGGATCTCTCCTGCATGACAGCCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp GGGAGACATCTGGAGAGAGGAGGTGCTTTCGTTCTTTaGATCGGCCTCTCTCCCTGCCTCCTGATCGGTGAG +
Preference number: 6 (lower is better)
Translates to: GRHLERGGAFVL*IGLSPCLLIGE
Trigger: CTCACCGATCAGGAGGCAGGGAGAGAGGCCGATCCAAAGAACGAAAGCACCTCCTCTCTCCAGATGTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp ATGGCGACCGTGACACTGGTGCTCTCCGTGGTAGCCTaGTCCATGTTGGCTGTCATGCAGGAGAGATCCGGT +
Preference number: 6 (lower is better)
Translates to: MATVTLVLSVVA*SMLAVMQERSG
Trigger: ACCGGATCTCTCCTGCATGACAGCCAACATGGACAAGGCTACCACGGAGAGCACCAGTGTCACGGTCGCCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 90 bp CATTGGCGGGGCCTCCTCTTTGTTGAGGGCTTCTTGGCTAGACATTaGCATGTGCCTCCTCAGCTGGCTGGTGCGTTGTTCCCACACAGA +
Preference number: 6 (lower is better)
Translates to: HWRGLLFVEGFLARH*HVPPQLAGALFPHR
Trigger: TCTGTGTGGGAACAACGCACCAGCCAGCTGAGGAGGCACATGCAAATGTCTAGCCAAGAAGCCCTCAACAAAGAGGAGGCCCCGCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 90 bp ATTGAGGGGGTTCATTGGCGGGGCCTCCTCTTTGTTGAGGGCTTCTaGGCTAGACATTTGCATGTGCCTCCTCAGCTGGCTGGTGCGTTG +
Preference number: 6 (lower is better)
Translates to: IEGVHWRGLLFVEGF*ARHLHVPPQLAGAL
Trigger: CAACGCACCAGCCAGCTGAGGAGGCACATGCAAATGTCTAGCCAAGAAGCCCTCAACAAAGAGGAGGCCCCGCCAATGAACCCCCTCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 90 bp GGGTTGAGTGGATTGAGGGGGTTCATTGGCGGGGCCTCCTCTTTGTaGAGGGCTTCTTGGCTAGACATTTGCATGTGCCTCCTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: GLSGLRGFIGGASSL*RASWLDICMCLLSW
Trigger: CCAGCTGAGGAGGCACATGCAAATGTCTAGCCAAGAAGCCCTCAACAAAGAGGAGGCCCCGCCAATGAACCCCCTCAATCCACTCAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp CATCCAGCTGTACGTCCCCAAGAAGGGCTTGTTCACTaGTGCCTTCAGCCTCCTGCTCTGTCAGAGCTGCAT +
Preference number: 6 (lower is better)
Translates to: HPAVRPQEGLVH*CLQPPALSELH
Trigger: ATGCAGCTCTGACAGAGCAGGAGGCTGAAGGCAGCAGTGAACAAGCCCTTCTTGGGGACGTACAGCTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp GGAGGTGCTTTCGTTCTTTGGATCGGCCTCTCTCCCTaGCTCCTGATCGGTGAGTGTCAGACTTGTGACCAG +
Preference number: 6 (lower is better)
Translates to: GGAFVLWIGLSP*LLIGECQTCDQ
Trigger: CTGGTCACAAGTCTGACACTCACCGATCAGGAGGCAGGGAGAGAGGCCGATCCAAAGAACGAAAGCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp AGGACTCAGTGGGTTGAGTGGATTGAGGGGGTTCATTaGCGGGGCCTCCTCTTTGTTGAGGGCTTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: RTQWVEWIEGVH*RGLLFVEGFLA
Trigger: AGCCAAGAAGCCCTCAACAAAGAGGAGGCCCCGCCAATGAACCCCCTCAATCCACTCAACCCACTGAGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp TCCTCCTTAAGTCCTGGGTTCTCTCCTCTTCGTGGATaGTCGGCTCTTTGCTCCTGTGGCTGCTGTGAGGCT +
Preference number: 6 (lower is better)
Translates to: SSLSPGFSPLRG*SALCSCGCCEA
Trigger: AGCCTCACAGCAGCCACAGGAGCAAAGAGCCGACCATCCACGAAGAGGAGAGAACCCAGGACTTAAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp CTACCAGTCCAGAGCCCCTGGGGACCATCAGACTGTTaGTCCTCCTTAAGTCCTGGGTTCTCTCCTCTTCGT +
Preference number: 6 (lower is better)
Translates to: LPVQSPWGPSDC*SSLSPGFSPLR
Trigger: ACGAAGAGGAGAGAACCCAGGACTTAAGGAGGACCAACAGTCTGATGGTCCCCAGGGGCTCTGGACTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp CTGCTTCATCAAGAGCCCCTACCAGTCCAGAGCCCCTaGGGACCATCAGACTGTTGGTCCTCCTTAAGTCCT +
Preference number: 6 (lower is better)
Translates to: LLHQEPLPVQSP*GPSDCWSSLSP
Trigger: AGGACTTAAGGAGGACCAACAGTCTGATGGTCCCCAGGGGCTCTGGACTGGTAGGGGCTCTTGATGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp GCATGTTCATCAGGACCAGCCTCTTATAGGCCACTTTaGAGGGACATCTCTTGCCGAGGCCTAGCGGTGGTG +
Preference number: 6 (lower is better)
Translates to: ACSSGPASYRPL*RDISCRGLAVV
Trigger: CACCACCGCTAGGCCTCGGCAAGAGATGTCCCTCCAAAGTGGCCTATAAGAGGCTGGTCCTGATGAACATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp CCAGGCACGGTAGCCGTTCAATTCTCGCTCAATCTGTaGCTGGCGCCGGAGCTTCATGAACGCTCTTCGGTT +
Preference number: 6 (lower is better)
Translates to: PGTVAVQFSLNL*LAPELHERSSV
Trigger: AACCGAAGAGCGTTCATGAAGCTCCGGCGCCAGCAACAGATTGAGCGAGAATTGAACGGCTACCGTGCCTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
ENSMUST00000238369.2
CDS CAA 72 bp GTGACACTGGTGCTCTCCGTGGTAGCCTTGTCCATGTaGGCTGTCATGCAGGAGAGATCCGGTTCACTCTGG +
Preference number: 6 (lower is better)
Translates to: VTLVLSVVALSM*AVMQERSGSLW
Trigger: CCAGAGTGAACCGGATCTCTCCTGCATGACAGCCAACATGGACAAGGCTACCACGGAGAGCACCAGTGTCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp GATCCAGTCCTTACATTCATAACCAGCCGGGCAGCCTaGCACACCACACGGGTGAGGAGGATCAAACCCCTC +
Preference number: 6 (lower is better)
Translates to: DPVLTFITSRAA*HTTRVRRIKPL
Trigger: GAGGGGTTTGATCCTCCTCACCCGTGTGGTGTGCAAGGCTGCCCGGCTGGTTATGAATGTAAGGACTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000187541.7
ENSMUST00000211821.2
ENSMUST00000238369.2
CDS TCA 72 bp CGCAGTCAAACACAGCCTTCAGCTTGGGCAAGCGCTTaGTGGTTTTCAGTGGCCGCAGAACTCGAAGTACCC +
Preference number: 6 (lower is better)
Translates to: RSQTQPSAWASA*WFSVAAELEVP
Trigger: GGGTACTTCGAGTTCTGCGGCCACTGAAAACCATCAAGCGCTTGCCCAAGCTGAAGGCTGTGTTTGACTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS TCA 72 bp AGACTTGTGACCAGAGTCAGAATTCAGGCGGTGTGCTaGCAGCCTCAGGGAGGAATGGTAACTTCTGCGCCG +
Preference number: 6 (lower is better)
Translates to: RLVTRVRIQAVC*QPQGGMVTSAP
Trigger: CGGCGCAGAAGTTACCATTCCTCCCTGAGGCTGTCAGCACACCGCCTGAATTCTGACTCTGGTCACAAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp GCCTCCTCTTTGTTGAGGGCTTCTTGGCTAGACATTTaGATGTGCCTCCTCAGCTGGCTGGTGCGTTGTTCC +
Preference number: 6 (lower is better)
Translates to: ASSLLRASWLDI*MCLLSWLVRCS
Trigger: GGAACAACGCACCAGCCAGCTGAGGAGGCACATGCAAATGTCTAGCCAAGAAGCCCTCAACAAAGAGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp TCAGAATTGCAGCGGGAGACATCTGGAGAGAGGAGGTaGTTTCGTTCTTTGGATCGGCCTCTCTCCCTGCCT +
Preference number: 6 (lower is better)
Translates to: SELQRETSGERR*FRSLDRPLSLP
Trigger: AGGCAGGGAGAGAGGCCGATCCAAAGAACGAAAGCACCTCCTCTCTCCAGATGTCTCCCGCTGCAATTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp TTCATTGGCGGGGCCTCCTCTTTGTTGAGGGCTTCTTaGCTAGACATTTGCATGTGCCTCCTCAGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: FIGGASSLLRAS*LDICMCLLSWL
Trigger: CAGCCAGCTGAGGAGGCACATGCAAATGTCTAGCCAAGAAGCCCTCAACAAAGAGGAGGCCCCGCCAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp CTGGGGACCATCAGACTGTTGGTCCTCCTTAAGTCCTaGGTTCTCTCCTCTTCGTGGATGGTCGGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: LGTIRLLVLLKS*VLSSSWMVGSL
Trigger: CAAAGAGCCGACCATCCACGAAGAGGAGAGAACCCAGGACTTAAGGAGGACCAACAGTCTGATGGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp GAAGGCATGTTGGGAGCAGACATCGGGCTGACCTCCTaGGCCTTCTGCAGTGCATGTTTCTGGTTGAAGGCT +
Preference number: 6 (lower is better)
Translates to: EGMLGADIGLTS*AFCSACFWLKA
Trigger: AGCCTTCAACCAGAAACATGCACTGCAGAAGGCCAAGGAGGTCAGCCCGATGTCTGCTCCCAACATGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp GGCCTCCTCTTTGTTGAGGGCTTCTTGGCTAGACATTaGCATGTGCCTCCTCAGCTGGCTGGTGCGTTGTTC +
Preference number: 6 (lower is better)
Translates to: GLLFVEGFLARH*HVPPQLAGALF
Trigger: GAACAACGCACCAGCCAGCTGAGGAGGCACATGCAAATGTCTAGCCAAGAAGCCCTCAACAAAGAGGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp GTTCATTGGCGGGGCCTCCTCTTTGTTGAGGGCTTCTaGGCTAGACATTTGCATGTGCCTCCTCAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: VHWRGLLFVEGF*ARHLHVPPQLA
Trigger: AGCCAGCTGAGGAGGCACATGCAAATGTCTAGCCAAGAAGCCCTCAACAAAGAGGAGGCCCCGCCAATGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp GGATTGAGGGGGTTCATTGGCGGGGCCTCCTCTTTGTaGAGGGCTTCTTGGCTAGACATTTGCATGTGCCTC +
Preference number: 6 (lower is better)
Translates to: GLRGFIGGASSL*RASWLDICMCL
Trigger: GAGGCACATGCAAATGTCTAGCCAAGAAGCCCTCAACAAAGAGGAGGCCCCGCCAATGAACCCCCTCAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 90 bp CAGGTCAGAGGCTTTGGGCATGGGCACAAGCAGATCCAACATCTTTaGGGACAGGTGAGGCCAAATGGCCAGGGTCTCTTTTTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: QVRGFGHGHKQIQHL*GQVRPNGQGLFLQL
Trigger: GAGCTGCAAAAAGAGACCCTGGCCATTTGGCCTCACCTGTCCCAAAAGATGTTGGATCTGCTTGTGCCCATGCCCAAAGCCTCTGACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS TCA 72 bp GCCGGAAATAGGAGGCCCCATCTACTTTTGTGCTCTTaGTACTGGCTCTGGCAAGAGGTGTGCCCACTGAAG +
Preference number: 6 (lower is better)
Translates to: AGNRRPHLLLCS*YWLWQEVCPLK
Trigger: CTTCAGTGGGCACACCTCTTGCCAGAGCCAGTATCAAGAGCACAAAAGTAGATGGGGCCTCCTATTTCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS TCA 72 bp CTTTCGTTCTTTGGATCGGCCTCTCTCCCTGCCTCCTaGTCGGTGAGTGTCAGACTTGTGACCAGAGTCAGA +
Preference number: 6 (lower is better)
Translates to: LSFFGSASLPAS*SVSVRLVTRVR
Trigger: TCTGACTCTGGTCACAAGTCTGACACTCACCGATCAGGAGGCAGGGAGAGAGGCCGATCCAAAGAACGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp GGTAACTTCTGCGCCGCGACTTGTAAGTGTTTTCACTaGTGCGTTCCATGGAGAACTCCTCCAACCAGGAGG +
Preference number: 6 (lower is better)
Translates to: GNFCAATCKCFH*CVPWRTPPTRR
Trigger: CCTCCTGGTTGGAGGAGTTCTCCATGGAACGCAGCAGTGAAAACACTTACAAGTCGCGGCGCAGAAGTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp GGTGTGCTGACAGCCTCAGGGAGGAATGGTAACTTCTaGGCCGCGACTTGTAAGTGTTTTCACTGCTGCGTT +
Preference number: 6 (lower is better)
Translates to: GVLTASGRNGNF*AATCKCFHCCV
Trigger: AACGCAGCAGTGAAAACACTTACAAGTCGCGGCGCAGAAGTTACCATTCCTCCCTGAGGCTGTCAGCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp GTCAGAGCTGCATCCTTCCCCACTTCCAGCTCAGGTTaGGGCTGGACTAGAGGTGTTTCTGCTTCATCAAGA +
Preference number: 6 (lower is better)
Translates to: VRAASFPTSSSG*GWTRGVSASSR
Trigger: TCTTGATGAAGCAGAAACACCTCTAGTCCAGCCCCAACCTGAGCTGGAAGTGGGGAAGGATGCAGCTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp CCTGAGGCAGTGATGAGGGCTCCATGCGCTGGAACATaGGTGCATTTTTCTGTTCTTCCAGCTGCTGTCTCT +
Preference number: 6 (lower is better)
Translates to: PEAVMRAPCAGT*VHFSVLPAAVS
Trigger: AGAGACAGCAGCTGGAAGAACAGAAAAATGCACCCATGTTCCAGCGCATGGAGCCCTCATCACTGCCTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp AGTGGATTGAGGGGGTTCATTGGCGGGGCCTCCTCTTaGTTGAGGGCTTCTTGGCTAGACATTTGCATGTGC +
Preference number: 6 (lower is better)
Translates to: SGLRGFIGGASS*LRASWLDICMC
Trigger: GCACATGCAAATGTCTAGCCAAGAAGCCCTCAACAAAGAGGAGGCCCCGCCAATGAACCCCCTCAATCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp TTGACCGTGAAACAGTTCTGCCGGACTGGTATGGGGTaGTACAAAGCCATAGTCCGCGCCCTCTGCGCTTTT +
Preference number: 6 (lower is better)
Translates to: LTVKQFCRTGMG*YKAIVRALCAF
Trigger: AAAAGCGCAGAGGGCGCGGACTATGGCTTTGTACAACCCCATACCAGTCCGGCAGAACTGTTTCACGGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000187541.7
ENSMUST00000238369.2
CDS GCA 72 bp TCTTTGTTGAGGGCTTCTTGGCTAGACATTTGCATGTaGCTCCTCAGCTGGCTGGTGCGTTGTTCCCACACA +
Preference number: 6 (lower is better)
Translates to: SLLRASWLDICM*LLSWLVRCSHT
Trigger: TGTGTGGGAACAACGCACCAGCCAGCTGAGGAGGCACATGCAAATGTCTAGCCAAGAAGCCCTCAACAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp TTAGTACAGGGTCCTCGGCTGCCAGGGCAATGCTGCTaGCCGCAATCACCAAGAGAATGCACATTTCAAAGT +
Preference number: 6 (lower is better)
Translates to: LVQGPRLPGQCC*PQSPRECTFQS
Trigger: ACTTTGAAATGTGCATTCTCTTGGTGATTGCGGCCAGCAGCATTGCCCTGGCAGCCGAGGACCCTGTACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp GCAGATCCAACATCTTTTGGGACAGGTGAGGCCAAATaGCCAGGGTCTCTTTTTGCAGCTCCGAGTCTAGCT +
Preference number: 6 (lower is better)
Translates to: ADPTSFGTGEAK*PGSLFAAPSLA
Trigger: AGCTAGACTCGGAGCTGCAAAAAGAGACCCTGGCCATTTGGCCTCACCTGTCCCAAAAGATGTTGGATCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp TGTCTTCTCCTTCTGTCTCTTTCAATGGAAGGCATGTaGGGAGCAGACATCGGGCTGACCTCCTTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: CLLLLSLSMEGM*GADIGLTSLAF
Trigger: GAAGGCCAAGGAGGTCAGCCCGATGTCTGCTCCCAACATGCCTTCCATTGAAAGAGACAGAAGGAGAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp TCTGCCTCCTTCAAGGGACTGGCTTCTCCATCCGTCTaGTTGCTAATGTTCACCACTGTCGAGTCCACCAAG +
Preference number: 6 (lower is better)
Translates to: SASFKGLASPSV*LLMFTTVESTK
Trigger: CTTGGTGGACTCGACAGTGGTGAACATTAGCAACAAGACGGATGGAGAAGCCAGTCCCTTGAAGGAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 90 bp GGCAGTATTAAGAGCCACAACACTCAGGACGATCCAGTAAAAGACTaGGGACTTGACCATGTGGCGGATAGAGATGCGCAGAAGCCGTTC +
Preference number: 6 (lower is better)
Translates to: GSIKSHNTQDDPVKD*GLDHVADRDAQKPF
Trigger: GAACGGCTTCTGCGCATCTCTATCCGCCACATGGTCAAGTCCCAAGTCTTTTACTGGATCGTCCTGAGTGTTGTGGCTCTTAATACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp ATGGCCAGGGTCTCTTTTTGCAGCTCCGAGTCTAGCTaGTGTCTGTCTGCACCACCTTTGGCGATTTTAATG +
Preference number: 6 (lower is better)
Translates to: MARVSFCSSESS*CLSAPPLAILM
Trigger: CATTAAAATCGCCAAAGGTGGTGCAGACAGACAGCAGCTAGACTCGGAGCTGCAAAAAGAGACCCTGGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp CCCCTTGTTGGTTCCCAAAGCGTTCGCCAGAGCAAATaGTACCAATGCACCAACCACTACTACAAAGTCCAG +
Preference number: 6 (lower is better)
Translates to: PLVGSQSVRQSK*YQCTNHYYKVQ
Trigger: CTGGACTTTGTAGTAGTGGTTGGTGCATTGGTAGCATTTGCTCTGGCGAACGCTTTGGGAACCAACAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp GAGCTAGGGTCTGTTACCACCAGAGATTGTTGTTCCTaGAATTGTCCATCATCCGCTGGGTCCATACAAGCC +
Preference number: 6 (lower is better)
Translates to: ELGSVTTRDCCS*NCPSSAGSIQA
Trigger: GGCTTGTATGGACCCAGCGGATGATGGACAATTCCAGGAACAACAATCTCTGGTGGTAACAGACCCTAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS CAA 72 bp AAGAGCCACAACACTCAGGACGATCCAGTAAAAGACTaGGGACTTGACCATGTGGCGGATAGAGATGCGCAG +
Preference number: 6 (lower is better)
Translates to: KSHNTQDDPVKD*GLDHVADRDAQ
Trigger: CTGCGCATCTCTATCCGCCACATGGTCAAGTCCCAAGTCTTTTACTGGATCGTCCTGAGTGTTGTGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp ACGTCGCATAGAGCTAGGGTCTGTTACCACCAGAGATaGTTGTTCCTGGAATTGTCCATCATCCGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: TSHRARVCYHQR*LFLELSIIRWV
Trigger: GACCCAGCGGATGATGGACAATTCCAGGAACAACAATCTCTGGTGGTAACAGACCCTAGCTCTATGCGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS TCA 72 bp AGGGACATCTCTTGCCGAGGCCTAGCGGTGGTGACATaGGAGTCAGCATTTCATACATCTCAGTGTAATGGA +
Preference number: 6 (lower is better)
Translates to: RDISCRGLAVVT*ESAFHTSQCNG
Trigger: TCCATTACACTGAGATGTATGAAATGCTGACTCTCATGTCACCACCGCTAGGCCTCGGCAAGAGATGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp GGTTCCCAAAGCGTTCGCCAGAGCAAATGCTACCAATaGACCAACCACTACTACAAAGTCCAGGATGTTCCA +
Preference number: 6 (lower is better)
Translates to: GSQSVRQSKCYQ*TNHYYKVQDVP
Trigger: TGGAACATCCTGGACTTTGTAGTAGTGGTTGGTGCATTGGTAGCATTTGCTCTGGCGAACGCTTTGGGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp TTCAGTGGCCGCAGAACTCGAAGTACCCTCAGAGACTaGATAGTCTTGATATCCCTCCCCTTGTTGGTTCTG +
Preference number: 6 (lower is better)
Translates to: FSGRRTRSTLRD*IVLISLPLLVL
Trigger: CAGAACCAACAAGGGGAGGGATATCAAGACTATCAAGTCTCTGAGGGTACTTCGAGTTCTGCGGCCACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004214.15
CDS CAA 72 bp AGGGTCTGTTACCACCAGAGATTGTTGTTCCTGGAATaGTCCATCATCCGCTGGGTCCATACAAGCCAACTG +
Preference number: 6 (lower is better)
Translates to: RVCYHQRLLFLE*SIIRWVHTSQL
Trigger: CAGTTGGCTTGTATGGACCCAGCGGATGATGGACAATTCCAGGAACAACAATCTCTGGTGGTAACAGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS CAA 72 bp ACTAACCTCTGGCTCCAGAGATTGTTGTTCCTGGAATaGTCCATCATCCGCTGGGTCCATACAAGCCAACTG +
Preference number: 6 (lower is better)
Translates to: TNLWLQRLLFLE*SIIRWVHTSQL
Trigger: CAGTTGGCTTGTATGGACCCAGCGGATGATGGACAATTCCAGGAACAACAATCTCTGGAGCCAGAGGTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211821.2
CDS CAA 90 bp TTGATGGTTTTCAGTGGCCGCAGAACTCGAAGTACCCTCAGAGACTaGATAGTCTTGATATCCCTCCCCTTGTTGGTTCCCAAAGCGTTC +
Preference number: 6 (lower is better)
Translates to: LMVFSGRRTRSTLRD*IVLISLPLLVPKAF
Trigger: GAACGCTTTGGGAACCAACAAGGGGAGGGATATCAAGACTATCAAGTCTCTGAGGGTACTTCGAGTTCTGCGGCCACTGAAAACCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS TCA 72 bp CCACTACTACAAAGTCCAGGATGTTCCAGAGGTCTCTaGAGTATGATCCATCCTGCAGGATCAAGCCTTGGT +
Preference number: 6 (lower is better)
Translates to: PLLQSPGCSRGL*SMIHPAGSSLG
Trigger: ACCAAGGCTTGATCCTGCAGGATGGATCATACTTCAGAGACCTCTGGAACATCCTGGACTTTGTAGTAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp CTTCTTCTCTACCTCTTCTTCTTCCTCTTTAGTCTCTaGCTCCTTCAAGGGACTGGCTTCTCCATCCGTCTT +
Preference number: 6 (lower is better)
Translates to: LLLYLFFFLFSL*LLQGTGFSIRL
Trigger: AAGACGGATGGAGAAGCCAGTCCCTTGAAGGAGGCAGAGACTAAAGAGGAAGAAGAAGAGGTAGAGAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS GCA 72 bp CCCCTTGTTGGTTCTGATTGCATTGGCCAGAGCAAATaGTACCAATGCACCAACCACTACTACAAAGTCCAG +
Preference number: 6 (lower is better)
Translates to: PLVGSDCIGQSK*YQCTNHYYKVQ
Trigger: CTGGACTTTGTAGTAGTGGTTGGTGCATTGGTAGCATTTGCTCTGGCCAATGCAATCAGAACCAACAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004214.15
CDS GCA 72 bp AGGCGATGTTCAGGTACTTTAAGGCGAGCTCATAGGTaGAAGGAGCAGAGTAGTACTTCATCATCAGCACGA +
Preference number: 6 (lower is better)
Translates to: RRCSGTLRRAHR*KEQSSTSSSAR
Trigger: TCGTGCTGATGATGAAGTACTACTCTGCTCCTTGCACCTATGAGCTCGCCTTAAAGTACCTGAACATCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CCA 72 bp AATTCACTAACCTCTGGCTCCAGAGATTGTTGTTCCTaGAATTGTCCATCATCCGCTGGGTCCATACAAGCC +
Preference number: 6 (lower is better)
Translates to: NSLTSGSRDCCS*NCPSSAGSIQA
Trigger: GGCTTGTATGGACCCAGCGGATGATGGACAATTCCAGGAACAACAATCTCTGGAGCCAGAGGTTAGTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211821.2
CDS CAA 72 bp ACAATGTTATCTTCTCCGAAGATGAACAGGGATCTGTaGACCGTGAAACAGTTCTGCCGGACTGGTATGGGG +
Preference number: 6 (lower is better)
Translates to: TMLSSPKMNRDL*TVKQFCRTGMG
Trigger: CCCCATACCAGTCCGGCAGAACTGTTTCACGGTCAACAGATCCCTGTTCATCTTCGGAGAAGATAACATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000187541.7
ENSMUST00000238369.2
CDS CAA 90 bp TTGATGGTTTTCAGTGGCCGCAGAACTCGAAGTACCCTCAGAGACTaGATAGTCTTGATATCCCTCCCCTTGTTGGTTCTGATTGCATTG +
Preference number: 6 (lower is better)
Translates to: LMVFSGRRTRSTLRD*IVLISLPLLVLIAL
Trigger: CAATGCAATCAGAACCAACAAGGGGAGGGATATCAAGACTATCAAGTCTCTGAGGGTACTTCGAGTTCTGCGGCCACTGAAAACCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004214.15
CDS CAA 90 bp CATAGAGCTAGGGTCTGTTACCACCAGAGATTGTTGTTCCTGGAATaGTCCATCATCCGCTGGGTCCATACAAGCCAACTGGAATATTTC +
Preference number: 6 (lower is better)
Translates to: HRARVCYHQRLLFLE*SIIRWVHTSQLEYF
Trigger: GAAATATTCCAGTTGGCTTGTATGGACCCAGCGGATGATGGACAATTCCAGGAACAACAATCTCTGGTGGTAACAGACCCTAGCTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
CDS CCA 72 bp CAGAGATTGTTGTTCCTGGAATTGTCCATCATCCGCTaGGTCCATACAAGCCAACTGGAATATTTCTTGAGG +
Preference number: 6 (lower is better)
Translates to: QRLLFLELSIIR*VHTSQLEYFLR
Trigger: CCTCAAGAAATATTCCAGTTGGCTTGTATGGACCCAGCGGATGATGGACAATTCCAGGAACAACAATCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS TCA 72 bp GAGGATCAAACCCCTCTAGAATACCTGAATTGTTCATaGAGCATGCTCGATGCAACTTGCCACTGTAGAACT +
Preference number: 6 (lower is better)
Translates to: EDQTPLEYLNCS*SMLDATCHCRT
Trigger: AGTTCTACAGTGGCAAGTTGCATCGAGCATGCTTCATGAACAATTCAGGTATTCTAGAGGGGTTTGATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000187541.7
ENSMUST00000211821.2
ENSMUST00000238369.2
CDS GCA 72 bp AGGATGTTCCAGAGGTCTCTGAAGTATGATCCATCCTaGAGGATCAAGCCTTGGTCTATCATCTTTATAACC +
Preference number: 6 (lower is better)
Translates to: RMFQRSLKYDPS*RIKPWSIIFIT
Trigger: GGTTATAAAGATGATAGACCAAGGCTTGATCCTGCAGGATGGATCATACTTCAGAGACCTCTGGAACATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2
CDS CAA 72 bp ATCATGTACTCAAATGGCGGCCAATCGATGAGCTTCTaGGCGTATTTCCTGACAATGTTATCTTCTCCGAAG +
Preference number: 6 (lower is better)
Translates to: IMYSNGGQSMSF*AYFLTMLSSPK
Trigger: CTTCGGAGAAGATAACATTGTCAGGAAATACGCCAAGAAGCTCATCGATTGGCCGCCATTTGAGTACATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000187541.7
ENSMUST00000238369.2
CDS TCA 72 bp TTTGCTAAACACATGAAACTCAAGAAAAATGAAGACTaGAGTGTGGACACTATGCCCCTCCTTAGAATTGGG +
Preference number: 6 (lower is better)
Translates to: FAKHMKLKKNED*SVDTMPLLRIG
Trigger: CCCAATTCTAAGGAGGGGCATAGTGTCCACACTTCAGTCTTCATTTTTCTTGAGTTTCATGTGTTTAGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211821.2
CDS TCA 72 bp TCTGTTTCTTTACCTTACTCTGTTTATAGTAGTCCATaGTCATCATTGCTGCATAGATCTTGCCCACAGTCA +
Preference number: 6 (lower is better)
Translates to: SVSLPYSVYSSP*SSLLHRSCPQS
Trigger: TGACTGTGGGCAAGATCTATGCAGCAATGATGATCATGGACTACTATAAACAGAGTAAGGTAAAGAAACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000004214.15
ENSMUST00000187541.7
ENSMUST00000211821.2