RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNA1C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000051331

Ensembl transcript IDs: ENSMUST00000075591.13, ENSMUST00000078320.14, ENSMUST00000112790.9, ENSMUST00000112793.10, ENSMUST00000112825.9, ENSMUST00000185345.7, ENSMUST00000186889.7, ENSMUST00000187317.7, ENSMUST00000187386.7, ENSMUST00000187474.7, ENSMUST00000187940.7, ENSMUST00000188078.7, ENSMUST00000188106.7, ENSMUST00000188522.7, ENSMUST00000188865.7, ENSMUST00000189389.7, ENSMUST00000189520.7, ENSMUST00000190285.2, ENSMUST00000219018.2, ENSMUST00000219223.2, ENSMUST00000219833.2, ENSMUST00000220022.2, ENSMUST00000239204.2

Found 2079 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTaGCATAGATCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTC +
Preference number: 1 (lower is better)
Translates to: LAATSRLLLGALAHS*HRSLGPCSIETARL
Trigger: GAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR TCA 90 bp GGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGGAAAGAGTCCCTaGAGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCA +
Preference number: 1 (lower is better)
Translates to: GSCHLHLSSLQGKSP*RDHRDQTCTAGNLA
Trigger: TGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCTTCAGGGACTCTTTCCCTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR TCA 90 bp AAGCAGTCTGTGGGTATGGCTGGTGAAAGGAGGGTGGGTTGGGCATaGCACTGGGCAGAGTTCTGGCGGGGGATGCTGGGACTCAGCTTG +
Preference number: 1 (lower is better)
Translates to: KQSVGMAGERRVGWA*HWAEFWRGMLGLSL
Trigger: CAAGCTGAGTCCCAGCATCCCCCGCCAGAACTCTGCCCAGTGTCATGCCCAACCCACCCTCCTTTCACCAGCCATACCCACAGACTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp GCACAAGGAGAAAGCAGTCTGTGGGTATGGCTGGTGAAAGGAGGGTaGGTTGGGCATGACACTGGGCAGAGTTCTGGCGGGGGATGCTGG +
Preference number: 1 (lower is better)
Translates to: AQGESSLWVWLVKGG*VGHDTGQSSGGGCW
Trigger: CCAGCATCCCCCGCCAGAACTCTGCCCAGTGTCATGCCCAACCCACCCTCCTTTCACCAGCCATACCCACAGACTGCTTTCTCCTTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp GTGAGAGCCAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTTaGCAGACACAGTGGAGGGGCATCCCAGGGCCAGGCAAGGGCCAC +
Preference number: 1 (lower is better)
Translates to: VRAKLPQLLLHWQIL*QTQWRGIPGPGKGH
Trigger: GTGGCCCTTGCCTGGCCCTGGGATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCTCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp CTCCGTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTACCTCCAGGTCACGAGAACAGTGAGG +
Preference number: 1 (lower is better)
Translates to: LRTPPSSEAYPDSSE*RRCSGYLQVTRTVR
Trigger: CCTCACTGTTCTCGTGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTACGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR TCA 90 bp CAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTGGTaGAAGGAGGGTGGGTTGGGCATGACACTGGGCAGAGTTCTGGCG +
Preference number: 1 (lower is better)
Translates to: QFPWHKEKAVCGYGW*KEGGLGMTLGRVLA
Trigger: CGCCAGAACTCTGCCCAGTGTCATGCCCAACCCACCCTCCTTTCACCAGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 90 bp GATTTCAAGTCTGAGGGGCTGGTGCAGCTGTGGATGTGTGTGGTGTaGAGAACAGAAAGGTGCCCACAGTTCAAGGGTCACCGTGATGCC +
Preference number: 1 (lower is better)
Translates to: DFKSEGLVQLWMCVV*RTERCPQFKGHRDA
Trigger: GGCATCACGGTGACCCTTGAACTGTGGGCACCTTTCTGTTCTGCACACCACACACATCCACAGCTGCACCAGCCCCTCAGACTTGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp CTCCCCCAACTACTTCTCCATTGGCAAATTCTTTGGCAGACACAGTaGAGGGGCATCCCAGGGCCAGGCAAGGGCCACATTTCTCTAGCT +
Preference number: 1 (lower is better)
Translates to: LPQLLLHWQILWQTQ*RGIPGPGKGHISLA
Trigger: AGCTAGAGAAATGTGGCCCTTGCCTGGCCCTGGGATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp GGACCTTATCGAGTGAGAGCCAAGCTCCCCCAACTACTTCTCCATTaGCAAATTCTTTGGCAGACACAGTGGAGGGGCATCCCAGGGCCA +
Preference number: 1 (lower is better)
Translates to: GPYRVRAKLPQLLLH*QILWQTQWRGIPGP
Trigger: TGGCCCTGGGATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCTCTCACTCGATAAGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp AGGTGGATTTCAAGTCTGAGGGGCTGGTGCAGCTGTGGATGTGTGTaGTGTGCAGAACAGAAAGGTGCCCACAGTTCAAGGGTCACCGTG +
Preference number: 1 (lower is better)
Translates to: RWISSLRGWCSCGCV*CAEQKGAHSSRVTV
Trigger: CACGGTGACCCTTGAACTGTGGGCACCTTTCTGTTCTGCACACCACACACATCCACAGCTGCACCAGCCCCTCAGACTTGAAATCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp CAGAGAAGAGCAGAAGACAGCAGAAGAGCTGGGTGGAACACGTCCTaGCCTCGAAAAGCAAGATTCGGCATGGGCAACCTTACCACTGGG +
Preference number: 1 (lower is better)
Translates to: QRRAEDSRRAGWNTS*PRKARFGMGNLTTG
Trigger: CCCAGTGGTAAGGTTGCCCATGCCGAATCTTGCTTTTCGAGGTCAGGACGTGTTCCACCCAGCTCTTCTGCTGTCTTCTGCTCTTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp TGTATCTGTTTCTTTCATCCCTGTGAGATCCTGGTGCTCCCACCCTaGTCTCGATCCCATGCTTCTCTGCCTCCCTGCTTCAGGAGATGG +
Preference number: 1 (lower is better)
Translates to: CICFFHPCEILVLPP*SRSHASLPPCFRRW
Trigger: CCATCTCCTGAAGCAGGGAGGCAGAGAAGCATGGGATCGAGACCAGGGTGGGAGCACCAGGATCTCACAGGGATGAAAGAAACAGATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp GCTACTTCAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATaGCTGGTGAAAGGAGGGTGGGTTGGGCATGACACTGGGCAGAGT +
Preference number: 1 (lower is better)
Translates to: ATSVSLAQGESSLWV*LVKGGWVGHDTGQS
Trigger: ACTCTGCCCAGTGTCATGCCCAACCCACCCTCCTTTCACCAGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp TGTGGTGTGCAGAACAGAAAGGTGCCCACAGTTCAAGGGTCACCGTaGTGCCTTCTAGGGGGCCCTTTGCAGGGACCACTTGCTTATAAA +
Preference number: 1 (lower is better)
Translates to: CGVQNRKVPTVQGSP*CLLGGPLQGPLAYK
Trigger: TTTATAAGCAAGTGGTCCCTGCAAAGGGCCCCCTAGAAGGCATCACGGTGACCCTTGAACTGTGGGCACCTTTCTGTTCTGCACACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 90 bp TGCTGTGACAGTGCTTGGGAAAGCCAGCCACCTCTTCCCACGGGATaGTGGAACATTGGACAAGAATCCACAGAGAAGAGCAGAAGACAG +
Preference number: 1 (lower is better)
Translates to: CCDSAWESQPPLPTG*WNIGQESTEKSRRQ
Trigger: CTGTCTTCTGCTCTTCTCTGTGGATTCTTGTCCAATGTTCCAGCATCCCGTGGGAAGAGGTGGCTGGCTTTCCCAAGCACTGTCACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 90 bp TGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCCATaGCTCTGGGAACAGGCATGGCACATGACAGGTTTTCTTGGGGAC +
Preference number: 1 (lower is better)
Translates to: WAGVYEWSRGLFIFP*LWEQAWHMTGFLGD
Trigger: GTCCCCAAGAAAACCTGTCATGTGCCATGCCTGTTCCCAGAGGCATGGAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp TGCTTGGGAAAGCCAGCCACCTCTTCCCACGGGATGCTGGAACATTaGACAAGAATCCACAGAGAAGAGCAGAAGACAGCAGAAGAGCTG +
Preference number: 1 (lower is better)
Translates to: CLGKPATSSHGMLEH*TRIHREEQKTAEEL
Trigger: CAGCTCTTCTGCTGTCTTCTGCTCTTCTCTGTGGATTCTTGTCCAATGTTCCAGCATCCCGTGGGAAGAGGTGGCTGGCTTTCCCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp TGTGACAGTGCTTGGGAAAGCCAGCCACCTCTTCCCACGGGATGCTaGAACATTGGACAAGAATCCACAGAGAAGAGCAGAAGACAGCAG +
Preference number: 1 (lower is better)
Translates to: CDSAWESQPPLPTGC*NIGQESTEKSRRQQ
Trigger: CTGCTGTCTTCTGCTCTTCTCTGTGGATTCTTGTCCAATGTTCCAGCATCCCGTGGGAAGAGGTGGCTGGCTTTCCCAAGCACTGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp CATCCAGTGACTGCTCACCAGCTCCCAACTATGGCTGTCTGTGTTTaGGCTAATCATGGGTCAAAGGTGAGTCTATCCCACCACTGTCCC +
Preference number: 1 (lower is better)
Translates to: HPVTAHQLPTMAVCV*ANHGSKVSLSHHCP
Trigger: GGGACAGTGGTGGGATAGACTCACCTTTGACCCATGATTAGCCCAAACACAGACAGCCATAGTTGGGAGCTGGTGAGCAGTCACTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp TCACGGAGGGAAGTTTTCCTTAGTAACACTGGCAGGCTGAATTTCTaGGAGCAGCAGACATTGCAGCACTCACTCCAGGGCTCTGCCATC +
Preference number: 1 (lower is better)
Translates to: SRREVFLSNTGRLNF*EQQTLQHSLQGSAI
Trigger: GATGGCAGAGCCCTGGAGTGAGTGCTGCAATGTCTGCTGCTCTCAGAAATTCAGCCTGCCAGTGTTACTAAGGAAAACTTCCCTCCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp ACCACACAGAAGAGCTTTCCATACAGTGAGATGACCTGGTGGTGGTaGGGTTTAAGGCTTGACCTTTCCTCACTCCCCACCCCTCTAGTT +
Preference number: 1 (lower is better)
Translates to: TTQKSFPYSEMTWWW*GLRLDLSSLPTPLV
Trigger: AACTAGAGGGGTGGGGAGTGAGGAAAGGTCAAGCCTTAAACCCCACCACCACCAGGTCATCTCACTGTATGGAAAGCTCTTCTGTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp GACCCTTTTCACGGAGGGAAGTTTTCCTTAGTAACACTGGCAGGCTaGATTTCTGAGAGCAGCAGACATTGCAGCACTCACTCCAGGGCT +
Preference number: 1 (lower is better)
Translates to: DPFHGGKFSLVTLAG*ISESSRHCSTHSRA
Trigger: AGCCCTGGAGTGAGTGCTGCAATGTCTGCTGCTCTCAGAAATTCAGCCTGCCAGTGTTACTAAGGAAAACTTCCCTCCGTGAAAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp ATTGGACAAGAATCCACAGAGAAGAGCAGAAGACAGCAGAAGAGCTaGGTGGAACACGTCCTGACCTCGAAAAGCAAGATTCGGCATGGG +
Preference number: 1 (lower is better)
Translates to: IGQESTEKSRRQQKS*VEHVLTSKSKIRHG
Trigger: CCCATGCCGAATCTTGCTTTTCGAGGTCAGGACGTGTTCCACCCAGCTCTTCTGCTGTCTTCTGCTCTTCTCTGTGGATTCTTGTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp CGATCCCATGCTTCTCTGCCTCCCTGCTTCAGGAGATGGAAAGGATaGATAGTTTTTACAAGGGCTACAGTTCCATCCAGTGACTGCTCA +
Preference number: 1 (lower is better)
Translates to: RSHASLPPCFRRWKG*IVFTRATVPSSDCS
Trigger: TGAGCAGTCACTGGATGGAACTGTAGCCCTTGTAAAAACTATTCATCCTTTCCATCTCCTGAAGCAGGGAGGCAGAGAAGCATGGGATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp GGGGTTTGTCACTTGGCCTCTACTCACCAGCCACGTTCTTTCTACTaGTTTCCTGACTGTTCCAGGAATGTGCTGACTTTGGCAAAGGAA +
Preference number: 1 (lower is better)
Translates to: GVCHLASTHQPRSFY*FPDCSRNVLTLAKE
Trigger: TTCCTTTGCCAAAGTCAGCACATTCCTGGAACAGTCAGGAAATCAGTAGAAAGAACGTGGCTGGTGAGTAGAGGCCAAGTGACAAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp TCGAGCAGATTCTCACATGATCTCCATAAAAGGCTGGTAGGTCACTaGGACTGGAAGATACTCCGTAGGCAAAATCTGAGCGAATGGTTG +
Preference number: 1 (lower is better)
Translates to: SSRFSHDLHKRLVGH*DWKILRRQNLSEWL
Trigger: CAACCATTCGCTCAGATTTTGCCTACGGAGTATCTTCCAGTCCCAGTGACCTACCAGCCTTTTATGGAGATCATGTGAGAATCTGCTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp TTGGAACCAAGGCACCAGAGGAGGGTAAAAGACACAGTTGGGCCTTaGGTTCCTAGTCAGATTAAGAAGATGGGAACCCCAACTAATAGA +
Preference number: 1 (lower is better)
Translates to: LEPRHQRRVKDTVGP*VPSQIKKMGTPTNR
Trigger: TCTATTAGTTGGGGTTCCCATCTTCTTAATCTGACTAGGAACCCAAGGCCCAACTGTGTCTTTTACCCTCCTCTGGTGCCTTGGTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp TATGGACACAAGTGTGACACAAAGATGCCCATATTTCTTCTCTCTTaGACCAGTCCATATGCCCAGCACAGAAAGGAGCCCAGCTCAATC +
Preference number: 1 (lower is better)
Translates to: YGHKCDTKMPIFLLS*TSPYAQHRKEPSSI
Trigger: GATTGAGCTGGGCTCCTTTCTGTGCTGGGCATATGGACTGGTTCAAGAGAGAAGAAATATGGGCATCTTTGTGTCACACTTGTGTCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR GCA 90 bp GGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATaGCCATATTTCTTCTCTCTTGAACCAGTCCATATGCCCAGCACA +
Preference number: 1 (lower is better)
Translates to: GCTYAHTMDTSVTQR*PYFFSLEPVHMPST
Trigger: TGTGCTGGGCATATGGACTGGTTCAAGAGAGAAGAAATATGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CCA 90 bp TTATGGGTGCTACAAAGGCTGCATAAATGCTCGGTCAACCACATATaGAAATCCAAGGAGAAAGGCTGTTTCTACACTCCGCTTAACCCC +
Preference number: 1 (lower is better)
Translates to: LWVLQRLHKCSVNHI*KSKEKGCFYTPLNP
Trigger: GGGGTTAAGCGGAGTGTAGAAACAGCCTTTCTCCTTGGATTTCCATATGTGGTTGACCGAGCATTTATGCAGCCTTTGTAGCACCCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp ATCTCAGTTGAGACTACTCACAGCACTGAATTGATTTGCAATGCTTaGTCTGTTCAGCTCCATTCTCCAACTCCCTTCCCGAGATGGCTT +
Preference number: 1 (lower is better)
Translates to: ISVETTHSTELICNA*SVQLHSPTPFPRWL
Trigger: AAGCCATCTCGGGAAGGGAGTTGGAGAATGGAGCTGAACAGATCAAGCATTGCAAATCAATTCAGTGCTGTGAGTAGTCTCAACTGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 90 bp GAATTTCTGAGAGCAGCAGACATTGCAGCACTCACTCCAGGGCTCTaGCATCCATTTTTCAAAGACTATTTCTTCCCACAGGTTGTTCTT +
Preference number: 1 (lower is better)
Translates to: EFLRAADIAALTPGL*HPFFKDYFFPQVVL
Trigger: AAGAACAACCTGTGGGAAGAAATAGTCTTTGAAAAATGGATGGCAGAGCCCTGGAGTGAGTGCTGCAATGTCTGCTGCTCTCAGAAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp AGATTCTCACATGATCTCCATAAAAGGCTGGTAGGTCACTGGGACTaGAAGATACTCCGTAGGCAAAATCTGAGCGAATGGTTGAGTCTT +
Preference number: 1 (lower is better)
Translates to: RFSHDLHKRLVGHWD*KILRRQNLSEWLSL
Trigger: AAGACTCAACCATTCGCTCAGATTTTGCCTACGGAGTATCTTCCAGTCCCAGTGACCTACCAGCCTTTTATGGAGATCATGTGAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp GCGGGGGATGCTGGGACTCAGCTTGTAGCTTATATCTTTGATCAATaGGATCTGGCAATGCAGATCAAAGTGTTCAAAGGAAGATACAAG +
Preference number: 1 (lower is better)
Translates to: AGDAGTQLVAYIFDQ*DLAMQIKVFKGRYK
Trigger: CTTGTATCTTCCTTTGAACACTTTGATCTGCATTGCCAGATCCCATTGATCAAAGATATAAGCTACAAGCTGAGTCCCAGCATCCCCCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp ACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTaGCACAAAGATGCCCATATTTCTTCTCTCTTGAACCAGTCCATA +
Preference number: 1 (lower is better)
Translates to: TYHVGAHTHILWTQV*HKDAHISSLLNQSI
Trigger: TATGGACTGGTTCAAGAGAGAAGAAATATGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR GCA 90 bp GCCAAATTTGCAAGAATTGCCTCATTTATGTTGGATCAAGTGGCATaGCACCTATTCTGTAAGCCTTGCCCCATCAAGTGGTTTGCATTC +
Preference number: 1 (lower is better)
Translates to: AKFARIASFMLDQVA*HLFCKPCPIKWFAF
Trigger: GAATGCAAACCACTTGATGGGGCAAGGCTTACAGAATAGGTGGCATGCCACTTGATCCAACATAAATGAGGCAATTCTTGCAAATTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp TTTGAAGATACGAACAACCTAGGACCAGGCAGAAAGGGATTTAACTaGACTTGTCTGTTACTTGGACTGTGTCATGGACACACACACACA +
Preference number: 1 (lower is better)
Translates to: FEDTNNLGPGRKGFN*TCLLLGLCHGHTHT
Trigger: TGTGTGTGTGTGTCCATGACACAGTCCAAGTAACAGACAAGTCCAGTTAAATCCCTTTCTGCCTGGTCCTAGGTTGTTCGTATCTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp AAGGTGCCAAATTTGCAAGAATTGCCTCATTTATGTTGGATCAAGTaGCATGCCACCTATTCTGTAAGCCTTGCCCCATCAAGTGGTTTG +
Preference number: 1 (lower is better)
Translates to: KVPNLQELPHLCWIK*HATYSVSLAPSSGL
Trigger: CAAACCACTTGATGGGGCAAGGCTTACAGAATAGGTGGCATGCCACTTGATCCAACATAAATGAGGCAATTCTTGCAAATTTGGCACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp TTGCAGGGACCACTTGCTTATAAACCATCTGTCCTTAATTACCAATaGTTTCTCCCTACTTTTAACTTTGGTGTGTTTCTCCATGCTGGG +
Preference number: 1 (lower is better)
Translates to: LQGPLAYKPSVLNYQ*FLPTFNFGVFLHAG
Trigger: CCCAGCATGGAGAAACACACCAAAGTTAAAAGTAGGGAGAAACCATTGGTAATTAAGGACAGATGGTTTATAAGCAAGTGGTCCCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 90 bp CATCTAATTATTATCTCTAGAAGCCCTTATGGGTGCTACAAAGGCTaGATAAATGCTCGGTCAACCACATATGGAAATCCAAGGAGAAAG +
Preference number: 1 (lower is better)
Translates to: HLIIISRSPYGCYKG*INARSTTYGNPRRK
Trigger: CTTTCTCCTTGGATTTCCATATGTGGTTGACCGAGCATTTATGCAGCCTTTGTAGCACCCATAAGGGCTTCTAGAGATAATAATTAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 90 bp CCCAGCTGCAGGCTAATTCTGCTGCCATCCAGAAATTGTCAGGATTaGAGAAGGTTTGATAATTATGTTCAAAACAGTCATTGGGAAAAT +
Preference number: 1 (lower is better)
Translates to: PSCRLILLPSRNCQD*RRFDNYVQNSHWEN
Trigger: ATTTTCCCAATGACTGTTTTGAACATAATTATCAAACCTTCTGCAATCCTGACAATTTCTGGATGGCAGCAGAATTAGCCTGCAGCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp ACAAACAAACAAACAAATAAACAAAAACATTGTGAGAATCTCCAGTaGGTTCCTTTCACCTCTGTTCCCTTCACTGGGTTTGTAGAGGAA +
Preference number: 1 (lower is better)
Translates to: TNKQTNKQKHCENLQ*VPFTSVPFTGFVEE
Trigger: TTCCTCTACAAACCCAGTGAAGGGAACAGAGGTGAAAGGAACTCACTGGAGATTCTCACAATGTTTTTGTTTATTTGTTTGTTTGTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGCTCAGGGGTGGGGGTaGGGTCCTTTGGGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLAQGWG*GPLGGA
Trigger: AGCACCGCCCAAAGGACCCCACCCCCACCCCTGAGC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCTCAGGGGTGGGGGTaGGGTCCTTTGGGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLAQGWG*GPLGGA
Trigger: AGCACCGCCCAAAGGACCCCACCCCCACCCCTGAGC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCTCAGGGGTGGGGGTaGGGTCCTTTGGGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQAQGWG*GPLGGA
Trigger: AGCACCGCCCAAAGGACCCCACCCCCACCCCTGAGC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCAGATCCCTGGGGCCCTaGTCCATAGAGACGGCCAGG +
Preference number: 2 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLRSLGP*SIETAR
Trigger: CCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGATCT...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTAGATCCCTGGGGCCCTaGTCCATAGAGACGGCCAGG +
Preference number: 2 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLRSLGP*SIETAR
Trigger: CCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGATCT...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATCCTACTGGGGGCGCTaGCCCATTCCTGCCATAGAT +
Preference number: 2 (lower is better)
Translates to: GGWCDLHWLLPPASQLLASYWGR*PIPAID
Trigger: ATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: GGWCDLHWLLPPASQLLALSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CAA 90 bp AGTGAGAGCCAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTaGGCAGACACAGTGGAGGGGCATCCCAGGGCCAGGCAAGGGCCA +
Preference number: 2 (lower is better)
Translates to: SESQAPPTTSPLANS*ADTVEGHPRARQGP
Trigger: TGGCCCTTGCCTGGCCCTGGGATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCTCTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGAGGTCACGAGAACAGTaGGGCACTTCTGAAACGAAC +
Preference number: 2 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQRSREQ*GTSETN
Trigger: GTTCGTTTCAGAAGTGCCTCACTGTTCTCGTGACCT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTAGGTCACGAGAACAGTaGGGCACTTCTGAAACGAAC +
Preference number: 2 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLRSREQ*GTSETN
Trigger: GTTCGTTTCAGAAGTGCCTCACTGTTCTCGTGACCT...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCAGAACATGTGCAAATaGCTGTTTATACAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRQNMCK*LFIQAR
Trigger: CCTTGCTTGTATAAACAGTCATTTGCACATGTTCTG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp CTTAACATCAGCTTCCGTGGGCTTGGAGTAGCTCTTTTGAAATCCAGACACTCCAGATCCCTGGGGCCCTaGTCCATAGAGACGGCCAGG +
Preference number: 2 (lower is better)
Translates to: LNISFRGLGVALLKSRHSRSLGP*SIETAR
Trigger: CCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGATCT...GGAGTGTCTGGATTTCAAAAGAGCTACTCCAAGCCCACGGAAGCTGATGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGCTCAGGGGTGGGGGTaGGGTCCTTTGGGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTAQGWG*GPLGGA
Trigger: AGCACCGCCCAAAGGACCCCACCCCCACCCCTGAGC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCAGAACATGTGCAAATaGCTGTTTATACAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQQNMCK*LFIQAR
Trigger: CCTTGCTTGTATAAACAGTCATTTGCACATGTTCTG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCTTCCATACAGTGAGATaGCCTGGTGGTGGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFFHTVR*PGGGGV
Trigger: AACCCCACCACCACCAGGTCATCTCACTGTATGGAA...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAACAGGGAAAGAGTCCCTaGAGGGACCATAGGGACCAG +
Preference number: 2 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQQGKSP*RDHRDQ
Trigger: CTGGTCCCTATGGTCCCTTCAGGGACTCTTTCCCTG...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCAGAGCTGGGGCTTGTTaGAGAACAGAATTGGTCAGG +
Preference number: 2 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFRAGAC*RTELVR
Trigger: CCTGACCAATTCTGTTCTTCAACAAGCCCCAGCTCT...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGCTGGCTCCTGCCACCTaGATCTCAGCTCCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: SWDRKMQLPILVSEAEAELAPAT*ISAPCR
Trigger: CCTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAG...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCCCTCTTCCCACGGGATaGTGGAACATTGGACAAGAA +
Preference number: 2 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFPLPTG*WNIGQE
Trigger: TTCTTGTCCAATGTTCCAGCATCCCGTGGGAAGAGG...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR GCA 90 bp CTTAACATCAGCTTCCGTGGGCTTGGAGTAGCTCTTTTGAAATCCAGACACTCCCCTGTGAGATCCTGGTaGTCCCACCCTGGTCTCGAT +
Preference number: 2 (lower is better)
Translates to: LNISFRGLGVALLKSRHSPVRSW*SHPGLD
Trigger: ATCGAGACCAGGGTGGGAGCACCAGGATCTCACAGG...GGAGTGTCTGGATTTCAAAAGAGCTACTCCAAGCCCACGGAAGCTGATGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGCTCAGGGGTGGGGGTaGGGTCCTTTGGGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVAQGWG*GPLGGA
Trigger: AGCACCGCCCAAAGGACCCCACCCCCACCCCTGAGC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATCCTACTGGGGGCGCTaGCCCATTCCTGCCATAGAT +
Preference number: 2 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQSYWGR*PIPAID
Trigger: ATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTCCTACTGGGGGCGCTaGCCCATTCCTGCCATAGAT +
Preference number: 2 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWSYWGR*PIPAID
Trigger: ATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGGGTGGGGGTGGCGGTaGGGGTGGACCGCACCATTT +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVGWGWR*GWTAPF
Trigger: AAATGGTGCGGTCCACCCCCACCGCCACCCCCACCC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp AAAGGCTACTTCAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTATCCCTGTGAGATCCTaGTGCTCCCACCCTGGTCTC +
Preference number: 2 (lower is better)
Translates to: KGYFSFLGTRRKQSVGMAIPVRS*CSHPGL
Trigger: GAGACCAGGGTGGGAGCACCAGGATCTCACAGGGAT...AGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CAA 90 bp AAGTGGCATGCCACCTATTCTGTAAGCCTTGCCCCATCAAGTGGTTaGCATTCTGGGGGAATTGCAGGCCCTAGGATTTCTCATGAGGAC +
Preference number: 2 (lower is better)
Translates to: KWHATYSVSLAPSSG*HSGGIAGPRISHED
Trigger: GTCCTCATGAGAAATCCTAGGGCCTGCAATTCCCCCAGAATGCAAACCACTTGATGGGGCAAGGCTTACAGAATAGGTGGCATGCCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGCAGGGAAAGAGTCCCTaGAGGGACCATAGGGACCAG +
Preference number: 2 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQQGKSP*RDHRDQ
Trigger: CTGGTCCCTATGGTCCCTTCAGGGACTCTTTCCCTG...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCTGGCTCCTGCCACCTaGATCTCAGCTCCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTLAPAT*ISAPCR
Trigger: CCTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGATCTGCACTGGCTCCTaGCACCTGCATCTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEICTGS*HLHLSS
Trigger: GGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGAT...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTCCTACTGGGGGCGCTaGCCCATTCCTGCCATAGAT +
Preference number: 2 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQSYWGR*PIPAID
Trigger: ATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp AAAGGCTACTTCAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTTGGTGTGATCTGCACTaGCTCCTGCCACCTGCATCT +
Preference number: 2 (lower is better)
Translates to: KGYFSFLGTRRKQSVGMAWCDLH*LLPPAS
Trigger: AGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCA...AGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGGGTGGGGGTGGCGGTaGGGGTGGACCGCACCATTT +
Preference number: 2 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKGWGWR*GWTAPF
Trigger: AAATGGTGCGGTCCACCCCCACCGCCACCCCCACCC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp AAAGGCTACTTCAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTTCTGGCGGGGGATGCTaGGACTCAGCTTGTAGCTTA +
Preference number: 2 (lower is better)
Translates to: KGYFSFLGTRRKQSVGMASGGGC*DSACSL
Trigger: TAAGCTACAAGCTGAGTCCCAGCATCCCCCGCCAGA...AGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCAGGGAAAGAGTCCCTaGAGGGACCATAGGGACCAG +
Preference number: 2 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTQGKSP*RDHRDQ
Trigger: CTGGTCCCTATGGTCCCTTCAGGGACTCTTTCCCTG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp AGCCAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTTGGCAGACACAGTGGTTCCATCCAGTGACTaGTCACCAGCTCCCAACTAT +
Preference number: 2 (lower is better)
Translates to: SQAPPTTSPLANSLADTVVPSSD*SPAPNY
Trigger: ATAGTTGGGAGCTGGTGAGCAGTCACTGGATGGAAC...CACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGTGGTGTGATCTGCACTaGCTCCTGCCACCTGCATCT +
Preference number: 2 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEWCDLH*LLPPAS
Trigger: AGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCA...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTGGTGTGATCTGCACTaGCTCCTGCCACCTGCATCT +
Preference number: 2 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQWCDLH*LLPPAS
Trigger: AGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCTTGCCTCATTTATGTTaGATCAAGTGGCATGCCACC +
Preference number: 2 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFLPHLC*IKWHAT
Trigger: GGTGGCATGCCACTTGATCCAACATAAATGAGGCAA...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGAGGTCACGAGAACAGTaGGGCACTTCTGAAACGAAC +
Preference number: 2 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWRSREQ*GTSETN
Trigger: GTTCGTTTCAGAAGTGCCTCACTGTTCTCGTGACCT...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCTTTCTACTGATTTCCTaGCTGTTCCAGGAATGTGCT +
Preference number: 2 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFFLLIS*LFQECA
Trigger: AGCACATTCCTGGAACAGTCAGGAAATCAGTAGAAA...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAAGATCCCTGGGGCCCTaGTCCATAGAGACGGCCAGG +
Preference number: 2 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKRSLGP*SIETAR
Trigger: CCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGATCT...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCTGGCTCCTGCCACCTaGATCTCAGCTCCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPLAPAT*ISAPCR
Trigger: CCTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTACTGGCTCCTGCCACCTaGATCTCAGCTCCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVLAPAT*ISAPCR
Trigger: CCTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAG...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp CCTCTAGTTCTCTTGCTGCTGACACCTGTTTCAGAGCTGGGGCTTGTTGAAGAAGGCCATCCTTCTCCTTaGAGATGTCTGAAAACTGGT +
Preference number: 2 (lower is better)
Translates to: PLVLLLLTPVSELGLVEEGHPSP*RCLKTG
Trigger: ACCAGTTTTCAGACATCTCCAAGGAGAAGGATGGCC...TTCTTCAACAAGCCCCAGCTCTGAAACAGGTGTCAGCAGCAAGAGAACTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CAA 90 bp CCTAGATCCTTGTTCTCTAGGCCCAAATTTAGGAGCAGTAGGGGTTaGTCACTTGGCCTCTACTCACCAGCCACGTTCTTTCTACTGATT +
Preference number: 2 (lower is better)
Translates to: PRSLFSRPKFRSSRG*SLGLYSPATFFLLI
Trigger: AATCAGTAGAAAGAACGTGGCTGGTGAGTAGAGGCCAAGTGACAAACCCCTACTGCTCCTAAATTTGGGCCTAGAGAACAAGGATCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGAGGTCACGAGAACAGTaGGGCACTTCTGAAACGAAC +
Preference number: 2 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQRSREQ*GTSETN
Trigger: GTTCGTTTCAGAAGTGCCTCACTGTTCTCGTGACCT...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGAGGTCACGAGAACAGTaGGGCACTTCTGAAACGAAC +
Preference number: 2 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLRSREQ*GTSETN
Trigger: GTTCGTTTCAGAAGTGCCTCACTGTTCTCGTGACCT...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAATCTGCACTGGCTCCTaGCACCTGCATCTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVICTGS*HLHLSS
Trigger: GGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGAT...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTTGAACCAGTCCATATaGCCAGCACAGAAAGGAGCC +
Preference number: 2 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQLNQSI*PAQKGA
Trigger: GGCTCCTTTCTGTGCTGGGCATATGGACTGGTTCAA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCATGACATTTCATATCTaGACCAAGTTTTACCTGGCC +
Preference number: 2 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFMTFHI*TKFYLA
Trigger: GGCCAGGTAAAACTTGGTGCAGATATGAAATGTCAT...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATCCTACTGGGGGCGCTaGCCCATTCCTGCCATAGAT +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVSYWGR*PIPAID
Trigger: ATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp AGCCAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTTGGCAGACACAGTGGAGGAACATCCTTGCTaGAATTTCGAGCAGATTCTC +
Preference number: 2 (lower is better)
Translates to: SQAPPTTSPLANSLADTVEEHPC*NFEQIL
Trigger: GAGAATCTGCTCGAAATTCCAGCAAGGATGTTCCTC...CACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CCA 90 bp CCTCTAGTTCTCTTGCTGCTGACACCTGTTTCAGAGCTGGGGCTTGTTGAAGAAGACTTGTCTGTTACTTaGACTGTGTCATGGACACAC +
Preference number: 2 (lower is better)
Translates to: PLVLLLLTPVSELGLVEEDLSVT*TVSWTH
Trigger: GTGTGTCCATGACACAGTCCAAGTAACAGACAAGTC...TTCTTCAACAAGCCCCAGCTCTGAAACAGGTGTCAGCAGCAAGAGAACTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTACCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACAGGGAAAGAGTCCCTaGAGGGACCATAGGGACCAG +
Preference number: 2 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKQGKSP*RDHRDQ
Trigger: CTGGTCCCTATGGTCCCTTCAGGGACTCTTTCCCTG...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGAGATCCCTGGGGCCCTaGTCCATAGAGACGGCCAGG +
Preference number: 2 (lower is better)
Translates to: IQSNQIRLKYANANVETVRSLGP*SIETAR
Trigger: CCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGATCT...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAATCTGCACTGGCTCCTaGCACCTGCATCTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKICTGS*HLHLSS
Trigger: GGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGAT...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCACAGAACATGTGCAAATaGCTGTTTATACAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPQNMCK*LFIQAR
Trigger: CCTTGCTTGTATAAACAGTCATTTGCACATGTTCTG...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GACCAGGCAGAAAGGGATTTAACTGGACTTGTCTGTTACTTGGACTGTGTCATGAAAGTCGCAACATGCTaGCAAGAACCCTCAAACCAT +
Preference number: 2 (lower is better)
Translates to: DQAERDLTGLVCYLDCVMKVATC*QEPSNH
Trigger: ATGGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTT...CATGACACAGTCCAAGTAACAGACAAGTCCAGTTAAATCCCTTTCTGCCTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCAAATGTGGAAACAGTaGAGTGAGGCCGCGCAGTTG +
Preference number: 2 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPQMWKQ*SEAAQL
Trigger: CAACTGCGCGGCCTCACTTCACTGTTTCCACATTTG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CAA 90 bp GGCTATCTACTGTGTTCAGTTGGACTTCTCCAGAGCTCTGGATGGTaGAGAAGTGTGAGAAAGGAATGTAGACCTTCTCTTCATACAAGT +
Preference number: 2 (lower is better)
Translates to: GYLLCSVGLLQSSGW*RSVRKECRPSLHTS
Trigger: ACTTGTATGAAGAGAAGGTCTACATTCCTTTCTCACACTTCTCAACCATCCAGAGCTCTGGAGAAGTCCAACTGAACACAGTAGATAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGCTATGGACACAAGTGTaGCACAAAGATGCCCATATT +
Preference number: 2 (lower is better)
Translates to: SWDRKMQLPILVSEAEAELWTQV*HKDAHI
Trigger: AATATGGGCATCTTTGTGTCACACTTGTGTCCATAG...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGATCTGCACTGGCTCCTaGCACCTGCATCTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: IQSNQIRLKYANANVETVICTGS*HLHLSS
Trigger: GGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGAT...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: IQSNQIRLKYANANVETVPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGCAGAACATGTGCAAATaGCTGTTTATACAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEQNMCK*LFIQAR
Trigger: CCTTGCTTGTATAAACAGTCATTTGCACATGTTCTG...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTGGTTTGTTCTTaGTTTCAAATAGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: SWDRKMQLPILVSEAEAETVVCS*FQIAPD
Trigger: ATCTGGGGCTATTTGAAAGCAAGAACAAACCACTGT...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp AAAGGCTACTTCAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTTTATTGCATTGCTTTTaGATATCTCGTGGGACAGAA +
Preference number: 2 (lower is better)
Translates to: KGYFSFLGTRRKQSVGMALLHCF*ISRGTE
Trigger: TTCTGTCCCACGAGATATGCAAAAGCAATGCAATAA...AGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CAA 90 bp AACCATCTGTCCTTAATTACCAATGGTTTCTCCCTACTTTTAACTTaGGTGTGTTTCTCCATGCTGGGAAATCCTAGGAGACACAGACTA +
Preference number: 2 (lower is better)
Translates to: NHLSLITNGFSLLLT*VCFSMLGNPRRHRL
Trigger: TAGTCTGTGTCTCCTAGGATTTCCCAGCATGGAGAAACACACCAAAGTTAAAAGTAGGGAGAAACCATTGGTAATTAAGGACAGATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAAAAGTCGCAACATGCTaGCAAGAACCCTCAAACCAT +
Preference number: 2 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKKVATC*QEPSNH
Trigger: ATGGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTT...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTACAGAACATGTGCAAATaGCTGTTTATACAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVQNMCK*LFIQAR
Trigger: CCTTGCTTGTATAAACAGTCATTTGCACATGTTCTG...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGAAAGTCGCAACATGCTaGCAAGAACCCTCAAACCAT +
Preference number: 2 (lower is better)
Translates to: IQSNQIRLKYANANVETVKVATC*QEPSNH
Trigger: ATGGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTT...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CCA 72 bp CTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTaGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGG +
Preference number: 3 (lower is better)
Translates to: LLGTSQPPPGSY*GRWPIPAIDPW
Trigger: CCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR GCA 72 bp ACCTCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTaGCATAGATCCCTGGGGCCCTGCTCCATAGAGACG +
Preference number: 3 (lower is better)
Translates to: TSRLLLGALAHS*HRSLGPCSIET
Trigger: CGTCTCTATGGAGCAGGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CCA 72 bp GCCTGGCTAGCTGAGGGCGGGTGGTGTGATCTGCACTaGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGG +
Preference number: 3 (lower is better)
Translates to: AWLAEGGWCDLH*LLPPASQLLAG
Trigger: CCCTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGCTAGCCAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CCA 72 bp GAAAGCAGTCTGTGGGTATGGCTGGTGAAAGGAGGGTaGGTTGGGCATGACACTGGGCAGAGTTCTGGCGGG +
Preference number: 3 (lower is better)
Translates to: ESSLWVWLVKGG*VGHDTGQSSGG
Trigger: CCCGCCAGAACTCTGCCCAGTGTCATGCCCAACCCACCCTCCTTTCACCAGCCATACCCACAGACTGCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp CCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTACCTCCAGGTCACGAGA +
Preference number: 3 (lower is better)
Translates to: PPSSEAYPDSSE*RRCSGYLQVTR
Trigger: TCTCGTGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR GCA 72 bp TCTGAGGGGCTGGTGCAGCTGTGGATGTGTGTGGTGTaGAGAACAGAAAGGTGCCCACAGTTCAAGGGTCAC +
Preference number: 3 (lower is better)
Translates to: SEGLVQLWMCVV*RTERCPQFKGH
Trigger: GTGACCCTTGAACTGTGGGCACCTTTCTGTTCTGCACACCACACACATCCACAGCTGCACCAGCCCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp TTCTTTCATCCCTGTGAGATCCTGGTGCTCCCACCCTaGTCTCGATCCCATGCTTCTCTGCCTCCCTGCTTC +
Preference number: 3 (lower is better)
Translates to: FFHPCEILVLPP*SRSHASLPPCF
Trigger: GAAGCAGGGAGGCAGAGAAGCATGGGATCGAGACCAGGGTGGGAGCACCAGGATCTCACAGGGATGAAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTTaGCAGACACAGTGGAGGGGCATCCCAGGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: KLPQLLLHWQIL*QTQWRGIPGPG
Trigger: GCCTGGCCCTGGGATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp AGATGGGTGCATGGTCTGGTAGGTGGATTTCAAGTCTaGGGGGCTGGTGCAGCTGTGGATGTGTGTGGTGTG +
Preference number: 3 (lower is better)
Translates to: RWVHGLVGGFQV*GAGAAVDVCGV
Trigger: CACACCACACACATCCACAGCTGCACCAGCCCCTCAGACTTGAAATCCACCTACCAGACCATGCACCCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CTACTTCTCCATTGGCAAATTCTTTGGCAGACACAGTaGAGGGGCATCCCAGGGCCAGGCAAGGGCCACATT +
Preference number: 3 (lower is better)
Translates to: LLLHWQILWQTQ*RGIPGPGKGHI
Trigger: AATGTGGCCCTTGCCTGGCCCTGGGATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CAGGATACGTTTCCCCAGGGCACCAGCTGTAGAACATaGACCTTATCGAGTGAGAGCCAAGCTCCCCCAACT +
Preference number: 3 (lower is better)
Translates to: QDTFPQGTSCRT*TLSSESQAPPT
Trigger: AGTTGGGGGAGCTTGGCTCTCACTCGATAAGGTCCATGTTCTACAGCTGGTGCCCTGGGGAAACGTATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp TCAAGTCTGAGGGGCTGGTGCAGCTGTGGATGTGTGTaGTGTGCAGAACAGAAAGGTGCCCACAGTTCAAGG +
Preference number: 3 (lower is better)
Translates to: SSLRGWCSCGCV*CAEQKGAHSSR
Trigger: CCTTGAACTGTGGGCACCTTTCTGTTCTGCACACCACACACATCCACAGCTGCACCAGCCCCTCAGACTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AGCAGGGTAAGACAGATGGGTGCATGGTCTGGTAGGTaGATTTCAAGTCTGAGGGGCTGGTGCAGCTGTGGA +
Preference number: 3 (lower is better)
Translates to: SRVRQMGAWSGR*ISSLRGWCSCG
Trigger: TCCACAGCTGCACCAGCCCCTCAGACTTGAAATCCACCTACCAGACCATGCACCCATCTGTCTTACCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CAA 90 bp CTCCCAACTATGGCTGTCTGTGTTTGGGCTAATCATGGGTCAAAGGTGAGTCTAGGGTTCTACAGGCTTTaGTGCAGGGGTGGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: LPTMAVCVWANHGSKVSLGFYRL*CRGGVG
Trigger: CCCCACCCCACCCCTGCACAAAAGCCTGTAGAACCC...TAGACTCACCTTTGACCCATGATTAGCCCAAACACAGACAGCCATAGTTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp GCAGAAGACAGCAGAAGAGCTGGGTGGAACACGTCCTaGCCTCGAAAAGCAAGATTCGGCATGGGCAACCTT +
Preference number: 3 (lower is better)
Translates to: AEDSRRAGWNTS*PRKARFGMGNL
Trigger: AAGGTTGCCCATGCCGAATCTTGCTTTTCGAGGTCAGGACGTGTTCCACCCAGCTCTTCTGCTGTCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp GCTTGGGAAAGCCAGCCACCTCTTCCCACGGGATGCTaGAACATTGGACAAGAATCCACAGAGAAGAGCAGA +
Preference number: 3 (lower is better)
Translates to: AWESQPPLPTGC*NIGQESTEKSR
Trigger: TCTGCTCTTCTCTGTGGATTCTTGTCCAATGTTCCAGCATCCCGTGGGAAGAGGTGGCTGGCTTTCCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp GTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATaGCTGGTGAAAGGAGGGTGGGTTGGGCATGACACT +
Preference number: 3 (lower is better)
Translates to: VSLAQGESSLWV*LVKGGWVGHDT
Trigger: AGTGTCATGCCCAACCCACCCTCCTTTCACCAGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CGAGTGAGAGCCAAGCTCCCCCAACTACTTCTCCATTaGCAAATTCTTTGGCAGACACAGTGGAGGGGCATC +
Preference number: 3 (lower is better)
Translates to: RVRAKLPQLLLH*QILWQTQWRGI
Trigger: GATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCTCTCACTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp TGGTCTGGTAGGTGGATTTCAAGTCTGAGGGGCTGGTaGAGCTGTGGATGTGTGTGGTGTGCAGAACAGAAA +
Preference number: 3 (lower is better)
Translates to: WSGRWISSLRGW*SCGCVWCAEQK
Trigger: TTTCTGTTCTGCACACCACACACATCCACAGCTGCACCAGCCCCTCAGACTTGAAATCCACCTACCAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CCTCATGTATCTGTTTCTTTCATCCCTGTGAGATCCTaGTGCTCCCACCCTGGTCTCGATCCCATGCTTCTC +
Preference number: 3 (lower is better)
Translates to: PHVSVSFIPVRS*CSHPGLDPMLL
Trigger: GAGAAGCATGGGATCGAGACCAGGGTGGGAGCACCAGGATCTCACAGGGATGAAAGAAACAGATACATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AAGAGCTTTCCATACAGTGAGATGACCTGGTGGTGGTaGGGTTTAAGGCTTGACCTTTCCTCACTCCCCACC +
Preference number: 3 (lower is better)
Translates to: KSFPYSEMTWWW*GLRLDLSSLPT
Trigger: GGTGGGGAGTGAGGAAAGGTCAAGCCTTAAACCCCACCACCACCAGGTCATCTCACTGTATGGAAAGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CAGAAGAGCTTTCCATACAGTGAGATGACCTGGTGGTaGTGGGGTTTAAGGCTTGACCTTTCCTCACTCCCC +
Preference number: 3 (lower is better)
Translates to: QKSFPYSEMTWW*WGLRLDLSSLP
Trigger: GGGGAGTGAGGAAAGGTCAAGCCTTAAACCCCACCACCACCAGGTCATCTCACTGTATGGAAAGCTCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CAA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCGCTACTTCAGTTTCCTaGGCACAAGGAGAAAGCAGT +
Preference number: 3 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFATSVS*AQGESS
Trigger: ACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGC...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp AGTGAAAGCCTCATGTATCTGTTTCTTTCATCCCTGTaGGATCCTGGTGCTCCCACCCTGGTCTCGATCCCA +
Preference number: 3 (lower is better)
Translates to: SESLMYLFLSSL*DPGAPTLVSIP
Trigger: TGGGATCGAGACCAGGGTGGGAGCACCAGGATCTCACAGGGATGAAAGAAACAGATACATGAGGCTTTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp ACTGCTCACCAGCTCCCAACTATGGCTGTCTGTGTTTaGGCTAATCATGGGTCAAAGGTGAGTCTATCCCAC +
Preference number: 3 (lower is better)
Translates to: TAHQLPTMAVCV*ANHGSKVSLSH
Trigger: GTGGGATAGACTCACCTTTGACCCATGATTAGCCCAAACACAGACAGCCATAGTTGGGAGCTGGTGAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AGGCACCAGAGGAGGGTAAAAGACACAGTTGGGCCTTaGGTTCCTAGTCAGATTAAGAAGATGGGAACCCCA +
Preference number: 3 (lower is better)
Translates to: RHQRRVKDTVGP*VPSQIKKMGTP
Trigger: TGGGGTTCCCATCTTCTTAATCTGACTAGGAACCCAAGGCCCAACTGTGTCTTTTACCCTCCTCTGGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AAAGCAGACTATGGAGCCGTCAGCCTTTGCCAAGGCTaGCAACAGAGTGACCACACAGAAGAGCTTTCCATA +
Preference number: 3 (lower is better)
Translates to: KADYGAVSLCQG*QQSDHTEELSI
Trigger: TATGGAAAGCTCTTCTGTGTGGTCACTCTGTTGCCAGCCTTGGCAAAGGCTGACGGCTCCATAGTCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp CACGGAGGGAAGTTTTCCTTAGTAACACTGGCAGGCTaGATTTCTGAGAGCAGCAGACATTGCAGCACTCAC +
Preference number: 3 (lower is better)
Translates to: HGGKFSLVTLAG*ISESSRHCSTH
Trigger: GTGAGTGCTGCAATGTCTGCTGCTCTCAGAAATTCAGCCTGCCAGTGTTACTAAGGAAAACTTCCCTCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp ATAATTTCCAAAGCAGACTATGGAGCCGTCAGCCTTTaGCAAGGCTGGCAACAGAGTGACCACACAGAAGAG +
Preference number: 3 (lower is better)
Translates to: IISKADYGAVSL*QGWQQSDHTEE
Trigger: CTCTTCTGTGTGGTCACTCTGTTGCCAGCCTTGGCAAAGGCTGACGGCTCCATAGTCTGCTTTGGAAATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp GTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCCATaGCTCTGGGAACAGGCATGGCACATGACAGGTTTT +
Preference number: 3 (lower is better)
Translates to: VYEWSRGLFIFP*LWEQAWHMTGF
Trigger: AAAACCTGTCATGTGCCATGCCTGTTCCCAGAGGCATGGAAAGATGAACAGGCCTCTAGACCACTCATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp TGTCCCTGTATGAGTGAAAGGCTACTTCAGTTTCCTTaGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTGG +
Preference number: 3 (lower is better)
Translates to: CPCMSERLLQFP*HKEKAVCGYGW
Trigger: CCAGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGCCTTTCACTCATACAGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CCTGTTTCAGAGCTGGGGCTTGTTGAAGAACAGAATTaGTCAGGACACTTAACATCAGCTTCCGTGGGCTTG +
Preference number: 3 (lower is better)
Translates to: PVSELGLVEEQN*SGHLTSASVGL
Trigger: CAAGCCCACGGAAGCTGATGTTAAGTGTCCTGACCAATTCTGTTCTTCAACAAGCCCCAGCTCTGAAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp ACACAGAAGAGCTTTCCATACAGTGAGATGACCTGGTaGTGGTGGGGTTTAAGGCTTGACCTTTCCTCACTC +
Preference number: 3 (lower is better)
Translates to: TQKSFPYSEMTW*WWGLRLDLSSL
Trigger: GAGTGAGGAAAGGTCAAGCCTTAAACCCCACCACCACCAGGTCATCTCACTGTATGGAAAGCTCTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CAA 90 bp AAAGGCTACTTCAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTCTTTCTCTGGTGATATaGAACCCTTGCTCCAGTGGG +
Preference number: 3 (lower is better)
Translates to: KGYFSFLGTRRKQSVGMALSLVI*NPCSSG
Trigger: CCCACTGGAGCAAGGGTTCAATATCACCAGAGAAAG...AGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CAA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAACTTTCTCTGGTGATATaGAACCCTTGCTCCAGTGGG +
Preference number: 3 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQLSLVI*NPCSSG
Trigger: CCCACTGGAGCAAGGGTTCAATATCACCAGAGAAAG...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR TCA 72 bp CACTTGGCCTCTACTCACCAGCCACGTTCTTTCTACTaGTTTCCTGACTGTTCCAGGAATGTGCTGACTTTG +
Preference number: 3 (lower is better)
Translates to: HLASTHQPRSFY*FPDCSRNVLTL
Trigger: CAAAGTCAGCACATTCCTGGAACAGTCAGGAAATCAGTAGAAAGAACGTGGCTGGTGAGTAGAGGCCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp CTTGCTGCTGACACCTGTTTCAGAGCTGGGGCTTGTTaGAGAACAGAATTGGTCAGGACACTTAACATCAGC +
Preference number: 3 (lower is better)
Translates to: LAADTCFRAGAC*RTELVRTLNIS
Trigger: GCTGATGTTAAGTGTCCTGACCAATTCTGTTCTTCAACAAGCCCCAGCTCTGAAACAGGTGTCAGCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp GTGGGCTTAAGAGTGGCAGCATTTCCTCAGTGTAGATaGAGAACACGGGCCCTATTTCTACCTGTGGAAACT +
Preference number: 3 (lower is better)
Translates to: VGLRVAAFPQCR*RTRALFLPVET
Trigger: AGTTTCCACAGGTAGAAATAGGGCCCGTGTTCTTCATCTACACTGAGGAAATGCTGCCACTCTTAAGCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp AGAGCAGCAGACATTGCAGCACTCACTCCAGGGCTCTaGCATCCATTTTTCAAAGACTATTTCTTCCCACAG +
Preference number: 3 (lower is better)
Translates to: RAADIAALTPGL*HPFFKDYFFPQ
Trigger: CTGTGGGAAGAAATAGTCTTTGAAAAATGGATGGCAGAGCCCTGGAGTGAGTGCTGCAATGTCTGCTGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp AATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTaGCAAGAACCCTCAAACCATGAAACCCCGAGCACC +
Preference number: 3 (lower is better)
Translates to: NKETKPQKVATC*QEPSNHETPST
Trigger: GGTGCTCGGGGTTTCATGGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR TCA 72 bp CTTAAATACGCAAATGCAAATGTGGAAACAGTGAAGTaGGGCCGCGCAGTTGTAACCGCTCTTATTCCTCCC +
Preference number: 3 (lower is better)
Translates to: LKYANANVETVK*GRAVVTALIPP
Trigger: GGGAGGAATAAGAGCGGTTACAACTGCGCGGCCTCACTTCACTGTTTCCACATTTGCATTTGCGTATTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR TCA 72 bp GCTTCTCTGCCTCCCTGCTTCAGGAGATGGAAAGGATaGATAGTTTTTACAAGGGCTACAGTTCCATCCAGT +
Preference number: 3 (lower is better)
Translates to: ASLPPCFRRWKG*IVFTRATVPSS
Trigger: ACTGGATGGAACTGTAGCCCTTGTAAAAACTATTCATCCTTTCCATCTCCTGAAGCAGGGAGGCAGAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp GAGACTACTCACAGCACTGAATTGATTTGCAATGCTTaGTCTGTTCAGCTCCATTCTCCAACTCCCTTCCCG +
Preference number: 3 (lower is better)
Translates to: ETTHSTELICNA*SVQLHSPTPFP
Trigger: CGGGAAGGGAGTTGGAGAATGGAGCTGAACAGATCAAGCATTGCAAATCAATTCAGTGCTGTGAGTAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp ATAGTTTTTACAAGGGCTACAGTTCCATCCAGTGACTaGTCACCAGCTCCCAACTATGGCTGTCTGTGTTTG +
Preference number: 3 (lower is better)
Translates to: IVFTRATVPSSD*SPAPNYGCLCL
Trigger: CAAACACAGACAGCCATAGTTGGGAGCTGGTGAGCAGTCACTGGATGGAACTGTAGCCCTTGTAAAAACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp GCAAGAATTGCCTCATTTATGTTGGATCAAGTGGCATaGCACCTATTCTGTAAGCCTTGCCCCATCAAGTGG +
Preference number: 3 (lower is better)
Translates to: ARIASFMLDQVA*HLFCKPCPIKW
Trigger: CCACTTGATGGGGCAAGGCTTACAGAATAGGTGGCATGCCACTTGATCCAACATAAATGAGGCAATTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp TTCTCACATGATCTCCATAAAAGGCTGGTAGGTCACTaGGACTGGAAGATACTCCGTAGGCAAAATCTGAGC +
Preference number: 3 (lower is better)
Translates to: FSHDLHKRLVGH*DWKILRRQNLS
Trigger: GCTCAGATTTTGCCTACGGAGTATCTTCCAGTCCCAGTGACCTACCAGCCTTTTATGGAGATCATGTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp ACGAACAACCTAGGACCAGGCAGAAAGGGATTTAACTaGACTTGTCTGTTACTTGGACTGTGTCATGGACAC +
Preference number: 3 (lower is better)
Translates to: TNNLGPGRKGFN*TCLLLGLCHGH
Trigger: GTGTCCATGACACAGTCCAAGTAACAGACAAGTCCAGTTAAATCCCTTTCTGCCTGGTCCTAGGTTGTTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp ACTTTGGCAAAGGAAGGGCTATCTACTGTGTTCAGTTaGACTTCTCCAGAGCTCTGGATGGTTGAGAAGTGT +
Preference number: 3 (lower is better)
Translates to: TLAKEGLSTVFS*TSPELWMVEKC
Trigger: ACACTTCTCAACCATCCAGAGCTCTGGAGAAGTCCAACTGAACACAGTAGATAGCCCTTCCTTTGCCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CTACAAAGGCTGCATAAATGCTCGGTCAACCACATATaGAAATCCAAGGAGAAAGGCTGTTTCTACACTCCG +
Preference number: 3 (lower is better)
Translates to: LQRLHKCSVNHI*KSKEKGCFYTP
Trigger: CGGAGTGTAGAAACAGCCTTTCTCCTTGGATTTCCATATGTGGTTGACCGAGCATTTATGCAGCCTTTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CTACTGTGTTCAGTTGGACTTCTCCAGAGCTCTGGATaGTTGAGAAGTGTGAGAAAGGAATGTAGACCTTCT +
Preference number: 3 (lower is better)
Translates to: LLCSVGLLQSSG*LRSVRKECRPS
Trigger: AGAAGGTCTACATTCCTTTCTCACACTTCTCAACCATCCAGAGCTCTGGAGAAGTCCAACTGAACACAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp TCAATCACTCAGGGAGAGAGGGGCCATCCTTCTCCTTaGAGATGTCTGAAAACTGGTATGATAAGGCTAAAA +
Preference number: 3 (lower is better)
Translates to: SITQGERGHPSP*RCLKTGMIRLK
Trigger: TTTTAGCCTTATCATACCAGTTTTCAGACATCTCCAAGGAGAAGGATGGCCCCTCTCTCCCTGAGTGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CAA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGCATATTTCTTCTCTCTaGAACCAGTCCATATGCCCA +
Preference number: 3 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQHISSL*NQSICP
Trigger: TGGGCATATGGACTGGTTCAAGAGAGAAGAAATATG...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CAA 90 bp CCTCTAGTTCTCTTGCTGCTGACACCTGTTTCAGAGCTGGGGCTTGTTGAAGAAAATCTGAGCGAATGGTaGAGTCTTATTTTCCTCAAA +
Preference number: 3 (lower is better)
Translates to: PLVLLLLTPVSELGLVEENLSEW*SLIFLK
Trigger: TTTGAGGAAAATAAGACTCAACCATTCGCTCAGATT...TTCTTCAACAAGCCCCAGCTCTGAAACAGGTGTCAGCAGCAAGAGAACTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp ATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATaGCTGTTTATACAAGCAAGGGGAAAACACCCTTTT +
Preference number: 3 (lower is better)
Translates to: IETARLRQNMCK*LFIQARGKHPF
Trigger: AAAAGGGTGTTTTCCCCTTGCTTGTATAAACAGTCATTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR TCA 72 bp ACTGGTTTTCTTAGACACTGTTCCCTACTGTCCTGGTaGCAGGTAGCATTTGTCATTTTTATCCAGGTAGTC +
Preference number: 3 (lower is better)
Translates to: TGFLRHCSLLSW*QVAFVIFIQVV
Trigger: GACTACCTGGATAAAAATGACAAATGCTACCTGTCACCAGGACAGTAGGGAACAGTGTCTAAGAAAACCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp ATTATCTCTAGAAGCCCTTATGGGTGCTACAAAGGCTaGATAAATGCTCGGTCAACCACATATGGAAATCCA +
Preference number: 3 (lower is better)
Translates to: IISRSPYGCYKG*INARSTTYGNP
Trigger: TGGATTTCCATATGTGGTTGACCGAGCATTTATGCAGCCTTTGTAGCACCCATAAGGGCTTCTAGAGATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp CACCATCTAATTATTATCTCTAGAAGCCCTTATGGGTaGTACAAAGGCTGCATAAATGCTCGGTCAACCACA +
Preference number: 3 (lower is better)
Translates to: HHLIIISRSPYG*YKGCINARSTT
Trigger: TGTGGTTGACCGAGCATTTATGCAGCCTTTGTAGCACCCATAAGGGCTTCTAGAGATAATAATTAGATGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp GCTGGGACTCAGCTTGTAGCTTATATCTTTGATCAATaGGATCTGGCAATGCAGATCAAAGTGTTCAAAGGA +
Preference number: 3 (lower is better)
Translates to: AGTQLVAYIFDQ*DLAMQIKVFKG
Trigger: TCCTTTGAACACTTTGATCTGCATTGCCAGATCCCATTGATCAAAGATATAAGCTACAAGCTGAGTCCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp ACACCAGGAAGACCAGGCTCTTTTTCACATACTATGTaGATCAAACTTCTTAAGACAGTTGGAGGAAAAGGG +
Preference number: 3 (lower is better)
Translates to: TPGRPGSFSHTM*IKLLKTVGGKG
Trigger: CCCTTTTCCTCCAACTGTCTTAAGAAGTTTGATCCACATAGTATGTGAAAAAGAGCCTGGTCTTCCTGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AATTTGCAAGAATTGCCTCATTTATGTTGGATCAAGTaGCATGCCACCTATTCTGTAAGCCTTGCCCCATCA +
Preference number: 3 (lower is better)
Translates to: NLQELPHLCWIK*HATYSVSLAPS
Trigger: TGATGGGGCAAGGCTTACAGAATAGGTGGCATGCCACTTGATCCAACATAAATGAGGCAATTCTTGCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp GAAAGATCTCAGTTGAGACTACTCACAGCACTGAATTaGTTTGCAATGCTTGATCTGTTCAGCTCCATTCTC +
Preference number: 3 (lower is better)
Translates to: ERSQLRLLTALN*FAMLDLFSSIL
Trigger: GAGAATGGAGCTGAACAGATCAAGCATTGCAAATCAATTCAGTGCTGTGAGTAGTCTCAACTGAGATCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp TACGCACATACTATGGACACAAGTGTGACACAAAGATaGCCATATTTCTTCTCTCTTGAACCAGTCCATATG +
Preference number: 3 (lower is better)
Translates to: YAHTMDTSVTQR*PYFFSLEPVHM
Trigger: CATATGGACTGGTTCAAGAGAGAAGAAATATGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CCA 72 bp AGCTATAAATGTACTGGGTCATATTCACAGGTGTTCTaGGACACACAGCCACACATTAAACAGGTTGAACAT +
Preference number: 3 (lower is better)
Translates to: SYKCTGSYSQVF*DTQPHIKQVEH
Trigger: ATGTTCAACCTGTTTAATGTGTGGCTGTGTGTCCCAGAACACCTGTGAATATGACCCAGTACATTTATAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AAGGTGCCAAATTTGCAAGAATTGCCTCATTTATGTTaGATCAAGTGGCATGCCACCTATTCTGTAAGCCTT +
Preference number: 3 (lower is better)
Translates to: KVPNLQELPHLC*IKWHATYSVSL
Trigger: AAGGCTTACAGAATAGGTGGCATGCCACTTGATCCAACATAAATGAGGCAATTCTTGCAAATTTGGCACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp TCTGAAAACTGGTATGATAAGGCTAAAAACCCTGATTaGCAGAGAGTTTACTCCATACTTGACCTAGATCCT +
Preference number: 3 (lower is better)
Translates to: SENWYDKAKNPD*QRVYSILDLDP
Trigger: AGGATCTAGGTCAAGTATGGAGTAAACTCTCTGGCAATCAGGGTTTTTAGCCTTATCATACCAGTTTTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AAGTTGCTTTTACTTAAGGAAATTGGAACAAGTTACTaGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGT +
Preference number: 3 (lower is better)
Translates to: KLLLLKEIGTSY*ADTEQVKPFSG
Trigger: ACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
72% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCCGTTGGGGCTCTGCTaGGCGCCCCCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWPLGLC*APPLRM
Trigger: CATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCCGGGCGGCATCGATaGCTGCCTGCCAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAGRHR*LPARTV
Trigger: CACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCGTTGGGGCTCTGCTaGGCGCCCCCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPLGLC*APPLRM
Trigger: CATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGCAGCTCTCGTCCTCTaGGGCCACAGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWAALVL*GHSPVL
Trigger: CAGGACAGGGCTGTGGCCCCAGAGGACGAGAGCTGC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTGCCAGCACTGCCCATaGGCTTGGCCTGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSCQHCP*AWPAGR
Trigger: CCGCCCGGCAGGCCAAGCTCATGGGCAGTGCTGGCA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGGCGGCATCGATGGCTaGCTGCCAGGACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKGGIDG*LPGQCC
Trigger: GCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCCATGAGCTTGGCCTaGCGGGCGGCATCGATGGCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPMSLA*RAASMA
Trigger: AGCCATCGATGCCGCCCGGCAGGCCAAGCTCATGGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGACCTCGTCATCGCCTaGAGGGGGCACCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPDLVIA*RGHHLV
Trigger: GACCAGGTGGTGCCCCCTGCAGGCGATGACGAGGTC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGAAACCCAGTGGGGGCTaGATTCGACGGAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWKPSGG*IRRRRV
Trigger: GACCCTCCTCCGTCGAATTCAGCCCCCACTGGGTTT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGGCGGCATCGATGGCTaGCTGCCAGGACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGGGIDG*LPGQCC
Trigger: GCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGAAGTTGGTGATGCCGTaGTTGGGCCCATCCCACCCG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWKLVMP*LGPSHP
Trigger: CGGGTGGGATGGGCCCAAGCACGGCATCACCAACTT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
68% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGGGTCTCCCCTTCCGTaGTGTTGCTGGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWGSPLP*CCWAQT
Trigger: AGTCTGAGCCCAGCAACAGCACGGAAGGGGAGACCC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGAGGGGGCTCAAGCCTaGCACTGCCAATGCCTGATG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWEGAQA*HCQCLM
Trigger: CATCAGGCATTGGCAGTGGCAGGCTTGAGCCCCCTC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGCTGGGCTCAGACTCTaGGGCACACTTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWAGLRL*GTLLAW
Trigger: CCAGGCAAGAAGTGTGCCCCAGAGTCTGAGCCCAGC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTGGCATTGGAGCCCGTaGATGAGTAGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWWHWSP*MSSCWG
Trigger: CCCCCAGCAGCTACTCATCCACGGGCTCCAATGCCA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTCTGCCCCGGCTGCCTaGAGTGACAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSSAPAA*SDRGCG
Trigger: CCCACACCCCCTGTCACTCCAGGCAGCCGGGGCAGA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCAGCTCTCGTCCTCTaGGGCCACAGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGAALVL*GHSPVL
Trigger: CAGGACAGGGCTGTGGCCCCAGAGGACGAGAGCTGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTGCCCAGGGGAGACATaGTCTTCGTCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWCPGET*SSSPPG
Trigger: TCCTGGTGGAGACGAAGATCATGTCTCCCCTGGGCA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCTTCACCAGGCGCATaGCCCGGAAGAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGASPGA*PGRGGR
Trigger: TCTTCCGCCTCTTCCGGGTCATGCGCCTGGTGAAGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAAAACCCAGTGGGGGCTaGATTCGACGGAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKKPSGG*IRRRRV
Trigger: GACCCTCCTCCGTCGAATTCAGCCCCCACTGGGTTT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGGCCTCCAGCCCTCCTaGAGATGTCATCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKGLQPS*RCHLRR
Trigger: CCTCCGAAGATGACATCTTCAGGAGGGCTGGAGGCC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCCATGAGCTTGGCCTaGCGGGCGGCATCGATGGCT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPMSLA*RAASMA
Trigger: AGCCATCGATGCCGCCCGGCAGGCCAAGCTCATGGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCCGTGTGGCGGTTGTaGCCCCCTGCTTCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGAVWRL*PPASWV
Trigger: AACCCAAGAAGCAGGGGGGCACAACCGCCACACGGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGAGACAGCAAAGCTGCTaGCACAGGGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWRQQSC*HRGSPL
Trigger: AAGGGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGACCTCGTCATCGCCTaGAGGGGGCACCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSDLVIA*RGHHLV
Trigger: GACCAGGTGGTGCCCCCTGCAGGCGATGACGAGGTC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGCAGGCTGGGCTCACTaGAGTACTCGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWAGWAH*STRLLH
Trigger: GTGAAGAAGCCGAGTACTGCAGTGAGCCCAGCCTGC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCCTCAGACCAGGAGCTaGAGTGGATGGATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWPQTRS*SGWMGS
Trigger: GCTTCCCATCCATCCACTGCAGCTCCTGGTCTGAGG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCGCTTCCACCAGGCTaGTGGCACTGCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPLPPG*WHCHGT
Trigger: AGTTCCATGGCAGTGCCAGCAGCCTGGTGGAAGCGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCTGGGCTCAGACTCTaGGGCACACTTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAGLRL*GTLLAW
Trigger: CCAGGCAAGAAGTGTGCCCCAGAGTCTGAGCCCAGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGTGCGCAAGCCAGCCTaGAGGGACAGTGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWVRKPA*RDSAFL
Trigger: AAGGAATGCACTGTCCCTCCAGGCTGGCTTGCGCAC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCTTGTTGATGTGCAGTaGGCGCTGGGTGGCGAACGT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLVDVQ*ALGGER
Trigger: ACGTTCGCCACCCAGCGCCCACTGCACATCAACAAG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTGGCATTGGAGCCCGTaGATGAGTAGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPWHWSP*MSSCWG
Trigger: CCCCCAGCAGCTACTCATCCACGGGCTCCAATGCCA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCCTCTTGTCCTCCTCTaGGCAGGTCAGTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWPLVLL*AGQLSV
Trigger: CACCGACAACTGACCTGCCCAGAGGAGGACAAGAGG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATCTGCCCCGGCTGCCTaGAGTGACAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLSAPAA*SDRGCG
Trigger: CCCACACCCCCTGTCACTCCAGGCAGCCGGGGCAGA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGCGTCAGCCAGCTCCTaGGTGGTGACCTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPASASS*VVTSMN
Trigger: GTTCATCGAGGTCACCACCCAGGAGCTGGCTGACGC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCAGCTCTCGTCCTCTaGGGCCACAGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSAALVL*GHSPVL
Trigger: CAGGACAGGGCTGTGGCCCCAGAGGACGAGAGCTGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTGCCCAGGGGAGACATaGTCTTCGTCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPCPGET*SSSPPG
Trigger: TCCTGGTGGAGACGAAGATCATGTCTCCCCTGGGCA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCTAGGATATGGTTCCTaGAGGAGGTGTGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLGYGS*RRCAGR
Trigger: CCGTCCAGCACACCTCCTTCAGGAACCATATCCTAG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTGGCCCTCAGGGGTCTaGGGACTCGCAGCACTCGTA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSWPSGV*GLAALV
Trigger: TACGAGTGCTGCGAGTCCTCAGACCCCTGAGGGCCA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTGGCCCTCAGGGGTCTaGGGACTCGCAGCACTCGTA +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRWPSGV*GLAALV
Trigger: TACGAGTGCTGCGAGTCCTCAGACCCCTGAGGGCCA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGCAAGGGTCGGGCCTTaGGGGCATATTCCACACATT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWARVGP*GHIPHI
Trigger: AATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCTTCACCAGGCGCATaGCCCGGAAGAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSASPGA*PGRGGR
Trigger: TCTTCCGCCTCTTCCGGGTCATGCGCCTGGTGAAGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGAAACCCAGTGGGGGCTaGATTCGACGGAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGKPSGG*IRRRRV
Trigger: GACCCTCCTCCGTCGAATTCAGCCCCCACTGGGTTT...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGGCCTCCAGCCCTCCTaGAGATGTCATCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGGLQPS*RCHLRR
Trigger: CCTCCGAAGATGACATCTTCAGGAGGGCTGGAGGCC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKCSLSC*CAVGAG
Trigger: CCCAGCGCCCACTGCACATCAACAAGACAGGGAACA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGGCGGCATCGATGGCTaGCTGCCAGGACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLGGIDG*LPGQCC
Trigger: GCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTGGGTTTCCCATACTaGTGCCGCTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLGFPY*CRFRCV
Trigger: CACACAGCGGAAGCGGCAGCAGTATGGGAAACCCAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGACAAGAAGGGCAATGTaGAGCAGAGGCACCATGGCC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWTRRAM*SRGTMA
Trigger: GGCCATGGTGCCTCTGCTGCACATTGCCCTTCTTGT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCCTTTTCCTTAAGGTaGAGCTCAGACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAFSLR*SSDRGR
Trigger: CCGGCCCCTGTCTGAGCTGCACCTTAAGGAAAAGGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATTCCTGAAGGAGGTGTaGTGGACGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKFLKEV*WTGSSA
Trigger: TGCTGAGGACCCCGTCCAGCACACCTCCTTCAGGAA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTTCCTGAAGGAGGTGTaGTGGACGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPFLKEV*WTGSSA
Trigger: TGCTGAGGACCCCGTCCAGCACACCTCCTTCAGGAA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGACCTCGTCATCGCCTaGAGGGGGCACCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLDLVIA*RGHHLV
Trigger: GACCAGGTGGTGCCCCCTGCAGGCGATGACGAGGTC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATCAGGCCCAATGTCATaGAAGGTGCGCAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSGPMS*KVRKPA
Trigger: GGCTGGCTTGCGCACCTTGCATGACATTGGGCCTGA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGGCATGAGCTGGGCGTaGGCTCCCATAGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGGMSWA*APIVGT
Trigger: GGTTCCAACTATGGGAGCCCACGCCCAGCTCATGCC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGLGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTCCCCTGCAGTGTCTaGGTTGGAGTGGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWFPCSV*VGVGTL
Trigger: AAGAGTCCCCACTCCAACCCAGACACTGCAGGGGAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGGCACACTTCTTGCCTaGCATGCAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWGTLLA*HAGQHD
Trigger: ATCATGCTGGCCTGCATGCCAGGCAAGAAGTGTGCC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTCAGATCCCCAGAGATaGCCCGCCGGATCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRSDPQR*PAGSQA
Trigger: GGCCTGAGATCCGGCGGGCCATCTCTGGGGATCTGA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACTTGTTGATGTGCAGTaGGCGCTGGGTGGCGAACGT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLVDVQ*ALGGER
Trigger: ACGTTCGCCACCCAGCGCCCACTGCACATCAACAAG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGACCAGGAGCTGCAGTaGATGGATGGGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKDQELQ*MDGKLL
Trigger: CAGCAGCTTCCCATCCATCCACTGCAGCTCCTGGTC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACTGCTGGCACTGCCATaGAACTGTCTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLLALP*NCLPGA
Trigger: AGCTCCAGGGAGACAGTTCCATGGCAGTGCCAGCAG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCTGCTGGCACTGCCATaGAACTGTCTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLLALP*NCLPGA
Trigger: AGCTCCAGGGAGACAGTTCCATGGCAGTGCCAGCAG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCACCGTTGGGGCTCTGCTaGGCGCCCCCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAPLGLC*APPLRM
Trigger: CATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGG...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGCAGCTCTCGTCCTCTaGGGCCACAGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLAALVL*GHSPVL
Trigger: CAGGACAGGGCTGTGGCCCCAGAGGACGAGAGCTGC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGAGGGTGGATAAGACGTaGGTGGCTAGAGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGRVDKT*VARGGA
Trigger: GGCTCCCCCTCTAGCCACCCACGTCTTATCCACCCT...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTGCCCAGGGGAGACATaGTCTTCGTCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGCPGET*SSSPPG
Trigger: TCCTGGTGGAGACGAAGATCATGTCTCCCCTGGGCA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCAAGGGTCGGGCCTTaGGGGCATATTCCACACATT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKARVGP*GHIPHI
Trigger: AATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCACTCTGATAGTAGGTaGCATGGTTGCCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWHSDSR*HGCRTG
Trigger: GCCTGTTCGGCAACCATGTCACCTACTATCAGAGTG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCAAGTTGGTGATGCCGTaGTTGGGCCCATCCCACCCG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSKLVMP*LGPSHP
Trigger: CGGGTGGGATGGGCCCAAGCACGGCATCACCAACTT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATTCCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGGAA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTCATCCTCTTCCCCTaGAGTGTCTGGGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWFILFP*SVWVGV
Trigger: CACTCCAACCCAGACACTGCAGGGGAAGAGGATGAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCCTTTTCCTTAAGGTaGAGCTCAGACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGAFSLR*SSDRGR
Trigger: CCGGCCCCTGTCTGAGCTGCACCTTAAGGAAAAGGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCGGGAGTTCTCCTCTaGACTCATAGAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAGVLL*THRGRA
Trigger: TGCTCTCCCTCTATGAGTGCAGAGGAGAACTCCCGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTCAGGCCCAATGTCATaGAAGGTGCGCAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGSGPMS*KVRKPA
Trigger: GGCTGGCTTGCGCACCTTGCATGACATTGGGCCTGA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGAGGGGGCTCAAGCCTaGCACTGCCAATGCCTGATG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSEGAQA*HCQCLM
Trigger: CATCAGGCATTGGCAGTGGCAGGCTTGAGCCCCCTC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGAGGGGGCTCAAGCCTaGCACTGCCAATGCCTGATG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSREGAQA*HCQCLM
Trigger: CATCAGGCATTGGCAGTGGCAGGCTTGAGCCCCCTC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCGCTTCCACCAGGCTaGTGGCACTGCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPLPPG*WHCHGT
Trigger: AGTTCCATGGCAGTGCCAGCAGCCTGGTGGAAGCGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGACTGAGGATGTTGTCTaGGGCGTTCTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWTEDVV*GVLHLL
Trigger: GAGGAGATGGAGAACGCCGCAGACAACATCCTCAGT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGGCATGAGCTGGGCGTaGGCTCCCATAGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSGMSWA*APIVGT
Trigger: GGTTCCAACTATGGGAGCCCACGCCCAGCTCATGCC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATGGAGTTGGTGGCGTTaGAGTCGTCTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKWSWWR*SRLPER
Trigger: CCTTTCCGGAAGACGACTCCAACGCCACCAACTCCA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCCAGGTTGGAGTTGGTaGCGTTGGAGTCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGPGWSW*RWSRLP
Trigger: CGGAAGACGACTCCAACGCCACCAACTCCAACCTGG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCCACTCGTTCCAGGTTaGAGTTGGTGGCGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPPLVPG*SWWRWS
Trigger: ACTCCAACGCCACCAACTCCAACCTGGAACGAGTGG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCACTCGTTCCAGGTTaGAGTTGGTGGCGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPLVPG*SWWRWS
Trigger: ACTCCAACGCCACCAACTCCAACCTGGAACGAGTGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTCCGATGGGCAAGCCTaGCTCCACAGTTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPSDGQA*LHSFLP
Trigger: AGGGAGAAAACTGTGGAGCCAGGCTTGCCCATCGGA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATCCGATGGGCAAGCCTaGCTCCACAGTTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSDGQA*LHSFLP
Trigger: AGGGAGAAAACTGTGGAGCCAGGCTTGCCCATCGGA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGTTTCTTTTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWVSFLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAAAAGAAAC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATTCCCCTGCAGTGTCTaGGTTGGAGTGGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKFPCSV*VGVGTL
Trigger: AAGAGTCCCCACTCCAACCCAGACACTGCAGGGGAA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTCATTGACAATACGGTaGCACTGCAGGCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWSLTIR*HCRRNL
Trigger: CAGGTTCCGCCTGCAGTGCCACCGTATTGTCAATGA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGGCACACTTCTTGCCTaGCATGCAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKGTLLA*HAGQHD
Trigger: ATCATGCTGGCCTGCATGCCAGGCAAGAAGTGTGCC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGCTGGGCTCAGACTCTaGGGCACACTTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRAGLRL*GTLLAW
Trigger: CCAGGCAAGAAGTGTGCCCCAGAGTCTGAGCCCAGC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTCAGAGGCATGTTCATaGACACCAGGCGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWSEACS*TPGVCR
Trigger: CCTGCAAACGCCTGGTGTCCATGAACATGCCTCTGA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATCAGATCCCCAGAGATaGCCCGCCGGATCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLSDPQR*PAGSQA
Trigger: GGCCTGAGATCCGGCGGGCCATCTCTGGGGATCTGA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTGGCATTGGAGCCCGTaGATGAGTAGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSWHWSP*MSSCWG
Trigger: CCCCCAGCAGCTACTCATCCACGGGCTCCAATGCCA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCCTCTTGTCCTCCTCTaGGCAGGTCAGTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGPLVLL*AGQLSV
Trigger: CACCGACAACTGACCTGCCCAGAGGAGGACAAGAGG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGAATGTGGTAGGAGAATaGCTTCTCTGCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWNVVGE*LLCRRG
Trigger: CCCCCTCCTGCAGAGAAGCCATTCTCCTACCACATT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGACCAGGAGCTGCAGTaGATGGATGGGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGDQELQ*MDGKLL
Trigger: CAGCAGCTTCCCATCCATCCACTGCAGCTCCTGGTC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTGCCAGCACTGCCCATaGGCTTGGCCTGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVCQHCP*AWPAGR
Trigger: CCGCCCGGCAGGCCAAGCTCATGGGCAGTGCTGGCA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTGCGCCAGTAGCGGCTaGATTTGGATTTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPCASSG*IWIWRS
Trigger: GGATCTCCAAATCCAAATTCAGCCGCTACTGGCGCA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATGCGCCAGTAGCGGCTaGATTTGGATTTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKCASSG*IWIWRS
Trigger: GGATCTCCAAATCCAAATTCAGCCGCTACTGGCGCA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATGTCTTGCACTTCTGTaGGCCAGTGAGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKCLALL*ASEAGC
Trigger: ACAACCAGCCTCACTGGCTCACAGAAGTGCAAGACA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGGAGCATTTCTGCAGTaGAAAGGGCCAGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGGAFLQ*KGPGGL
Trigger: AAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGGATCTGAAACACAGTaGGGAGAGACTGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKGSETQ*GETAGS
Trigger: ACTTCCCGCAGTCTCTCCTCACTGTGTTTCAGATCC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGACTGCAGCAGAGTGGTaGCAATTACGATGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWTAAEW*QLRCSR
Trigger: TCGGGAACATCGTAATTGTCACCACTCTGCTGCAGT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCAAGGGTCGGGCCTTaGGGGCATATTCCACACATT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGARVGP*GHIPHI
Trigger: AATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCTTCACCAGGCGCATaGCCCGGAAGAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAASPGA*PGRGGR
Trigger: TCTTCCGCCTCTTCCGGGTCATGCGCCTGGTGAAGC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTGAATTCATCCAGGTaGTGGGGACCGAGGATAGAC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLNSSR*WGPRID
Trigger: GTCTATCCTCGGTCCCCATCACCTGGATGAATTCAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCAGTGCATTCCTTTGTaGGGGCTTGCCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLQCIPL*GLAHQP
Trigger: GGGCTGGTGGGCAAGCCCTCACAAAGGAATGCACTG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRCSLSC*CAVGAG
Trigger: CCCAGCGCCCACTGCACATCAACAAGACAGGGAACA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCTGTCCCAGTCCTTCTaGAATCAAGACCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLSQSF*NQDRFH
Trigger: GTGGAAGCGGTCTTGATTTCAGAAGGACTGGGACAG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAACAGAATATGGTTCCTaGAGGAGGTGTGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKTEYGS*RRCAGR
Trigger: CCGTCCAGCACACCTCCTTCAGGAACCATATTCTGT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCTCGGGAGCAAGTCCTaGAGCTGCATTGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLGSKS*SCIGIH
Trigger: ATGAATGCCAATGCAGCTGCAGGACTTGCTCCCGAG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACTCGGGAGCAAGTCCTaGAGCTGCATTGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLGSKS*SCIGIH
Trigger: ATGAATGCCAATGCAGCTGCAGGACTTGCTCCCGAG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCCGTGTGGCGGTTGTaGCCCCCTGCTTCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLAVWRL*PPASWV
Trigger: AACCCAAGAAGCAGGGGGGCACAACCGCCACACGGC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAAAGTTGGTGATGCCGTaGTTGGGCCCATCCCACCCG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLKLVMP*LGPSHP
Trigger: CGGGTGGGATGGGCCCAAGCACGGCATCACCAACTT...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTTCCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGGAA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGGAAGTTATCGAACGTaGTCCTACGGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWGSYRT*SYGSAS
Trigger: AGATGCAGACCCGTAGGAGCACGTTCGATAACTTCC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGACAGTGAGGAGAGACTaGGGGAAGTTATCGAACGTG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWTVRRD*GKLSNV
Trigger: CACGTTCGATAACTTCCCGCAGTCTCTCCTCACTGT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCAATTTTCTCCTCTTTaGTCTCCTCCACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWQFSPL*SPPRLA
Trigger: AGCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTCCGGCATGGGAACTaGCTTTTCCTTAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWFRHGN*LFLKVQ
Trigger: CTGCACCTTAAGGAAAAGGCAGTTCCCATGCCGGAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTTCCTGAAGGAGGTGTaGTGGACGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSFLKEV*WTGSSA
Trigger: TGCTGAGGACCCCGTCCAGCACACCTCCTTCAGGAA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCACCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGGGTCTCCCCTTCCGTaGTGTTGCTGGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLGSPLP*CCWAQT
Trigger: AGTCTGAGCCCAGCAACAGCACGGAAGGGGAGACCC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCAGACAGCAAAGCTGCTaGCACAGGGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSRQQSC*HRGSPL
Trigger: AAGGGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCAGAAGACAGCAAAGCTaGTGCCACAGGGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSRRQQS*CHRGSP
Trigger: GGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCTTCT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTGCCCACCAGCCCCTaGTCTTTTCGCTTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLPTSP*SFRFLN
Trigger: ATTCAAGAAGCGAAAAGAGCAGGGGCTGGTGGGCAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTCCTTTGTGAGGGCTTaGCCACCAGCCCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRSFVRA*PPAPAL
Trigger: AAGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTCCTTTGTGAGGGCTTaGCCACCAGCCCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSSFVRA*PPAPAL
Trigger: AAGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCAATGTCATGCAAGGTaGGCAAGCCAGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSQCHAR*ASQPGG
Trigger: CCCTCCAGGCTGGCTTGCGCACCTTGCATGACATTG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGAGGAAAGTTGCCCCTaGTGTCACTCTGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWEESCP*CHSDSR
Trigger: CCTACTATCAGAGTGACAGCAGGGGCAACTTTCCTC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCAGGCTGGGCTCACTaGAGTACTCGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSAGWAH*STRLLH
Trigger: GTGAAGAAGCCGAGTACTGCAGTGAGCCCAGCCTGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCTCAAGCCTGCCACTaGCAATGCCTGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAQACH*QCLMMN
Trigger: GTTCATCATCAGGCATTGGCAGTGGCAGGCTTGAGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGGCATGAGCTGGGCGTaGGCTCCCATAGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLGMSWA*APIVGT
Trigger: GGTTCCAACTATGGGAGCCCACGCCCAGCTCATGCC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGCCGGGCGGCATCGATaGCTGCCTGCCAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKAGRHR*LPARTV
Trigger: CACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGCAGCAGGGAGGCAATaGAGCGCACTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRAAGRQ*SALSSA
Trigger: TGCTGAACTCAGTGCGCTCCATTGCCTCCCTGCTGC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCAGCAGGGAGGCAATaGAGCGCACTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSAAGRQ*SALSSA
Trigger: TGCTGAACTCAGTGCGCTCCATTGCCTCCCTGCTGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGTTTCTTTTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKVSFLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAAAAGAAAC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGTTTCTTTTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPVSFLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAAAAGAAAC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGTGTCTGGGTTGGAGTaGGGACTCTTATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWVSGLE*GLLSSF
Trigger: AAACGAGGATAAGAGTCCCCACTCCAACCCAGACAC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCTGCAGTGTCTGGGTTaGAGTGGGGACTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLQCLG*SGDSYP
Trigger: AGGATAAGAGTCCCCACTCCAACCCAGACACTGCAG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTTCCCCTGCAGTGTCTaGGTTGGAGTGGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGFPCSV*VGVGTL
Trigger: AAGAGTCCCCACTCCAACCCAGACACTGCAGGGGAA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTTGATCGCGCTGGACTaGATGCCAAAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLIALD*MPKEMR
Trigger: CCTCATCTCCTTTGGCATCCAGTCCAGCGCGATCAA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCCTTGTCTTCTGTGTaGGAGTCAATGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPLSSV*ESMERY
Trigger: GTACCGCTCCATTGACTCCCACACAGAAGACAAGGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCACGGTAGTTGTAGATaGGGCCCTTGTCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWHGSCR*GPCLLC
Trigger: ACACAGAAGACAAGGGCCCCATCTACAACTACCGTG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGGCACACTTCTTGCCTaGCATGCAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGGTLLA*HAGQHD
Trigger: ATCATGCTGGCCTGCATGCCAGGCAAGAAGTGTGCC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGTGCGCAAGCCAGCCTaGAGGGACAGTGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSVRKPA*RDSAFL
Trigger: AAGGAATGCACTGTCCCTCCAGGCTGGCTTGCGCAC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTCAGATCCCCAGAGATaGCCCGCCGGATCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLSDPQR*PAGSQA
Trigger: GGCCTGAGATCCGGCGGGCCATCTCTGGGGATCTGA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCTTGTTGATGTGCAGTaGGCGCTGGGTGGCGAACGT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLVDVQ*ALGGER
Trigger: ACGTTCGCCACCCAGCGCCCACTGCACATCAACAAG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTCTGCCCCGGCTGCCTaGAGTGACAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPSAPAA*SDRGCG
Trigger: CCCACACCCCCTGTCACTCCAGGCAGCCGGGGCAGA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCTGCTGGCACTGCCATaGAACTGTCTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLLALP*NCLPGA
Trigger: AGCTCCAGGGAGACAGTTCCATGGCAGTGCCAGCAG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGCGTCAGCCAGCTCCTaGGTGGTGACCTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLASASS*VVTSMN
Trigger: GTTCATCGAGGTCACCACCCAGGAGCTGGCTGACGC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCCGTTGGGGCTCTGCTaGGCGCCCCCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPPLGLC*APPLRM
Trigger: CATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCTCTGGAAATCAGGGTaGATAAGACGTGGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLWKSG*IRRGWL
Trigger: TAGCCACCCACGTCTTATCCACCCTGATTTCCAGAG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGGTGGCCACATGCAATaGGAGCTGGGCTGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQGGHMQ*ELGWVP
Trigger: GGGAACCCAGCCCAGCTCCCATTGCATGTGGCCACC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGGAGAGTGGCTGGTATaGGGGTGTGGATGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRGEWLV*GCGWLN
Trigger: GTTCAGCCATCCACACCCCCATACCAGCCACTCTCC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGGAGCATTTCTGCAGTaGAAAGGGCCAGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSGAFLQ*KGPGGL
Trigger: AAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGGAGCATTTCTGCAGTaGAAAGGGCCAGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRGAFLQ*KGPGGL
Trigger: AAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTGCCCAGGGGAGACATaGTCTTCGTCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLCPGET*SSSPPG
Trigger: TCCTGGTGGAGACGAAGATCATGTCTCCCCTGGGCA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCACTGCAGCAGAGTGGTaGCAATTACGATGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPTAAEW*QLRCSR
Trigger: TCGGGAACATCGTAATTGTCACCACTCTGCTGCAGT...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAACTGCAGCAGAGTGGTaGCAATTACGATGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKTAAEW*QLRCSR
Trigger: TCGGGAACATCGTAATTGTCACCACTCTGCTGCAGT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTATAGAGCTTTCCCTTaGAGAGCTGGACCCCAATGC +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPYRAFP*RAGPQC
Trigger: GCATTGGGGTCCAGCTCTTCAAGGGAAAGCTCTATA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTTGAATTCATCCAGGTaGTGGGGACCGAGGATAGAC +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLNSSR*WGPRID
Trigger: GTCTATCCTCGGTCCCCATCACCTGGATGAATTCAA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATTGCAGGCCACACGGTaGGGACACAATTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLQATR*GHNFPK
Trigger: TTTTGGGAAATTGTGTCCTCACCGTGTGGCCTGCAA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTTGCAGGCCACACGGTaGGGACACAATTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLQATR*GHNFPK
Trigger: TTTTGGGAAATTGTGTCCTCACCGTGTGGCCTGCAA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCAGTGCATTCCTTTGTaGGGGCTTGCCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLQCIPL*GLAHQP
Trigger: GGGCTGGTGGGCAAGCCCTCACAAAGGAATGCACTG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCCTCCAGCCCTCCTaGAGATGTCATCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAGLQPS*RCHLRR
Trigger: CCTCCGAAGATGACATCTTCAGGAGGGCTGGAGGCC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLCSLSC*CAVGAG
Trigger: CCCAGCGCCCACTGCACATCAACAAGACAGGGAACA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCTTCTCATGGGACGGTaGCTCAGTGTCAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGLLMGR*LSVSLV
Trigger: AACCAAGCTGACACTGAGTCACCGTCCCATGAGAAG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCTGTCCCAGTCCTTCTaGAATCAAGACCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGLSQSF*NQDRFH
Trigger: GTGGAAGCGGTCTTGATTTCAGAAGGACTGGGACAG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWMNLGS*ANCPSP
Trigger: AGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCAT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTGCCTGCCAGGACAGTaGTGCCCCTGGAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLCLPGQ*CPWSRD
Trigger: ATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGACAAGAAGGGCAATGTaGAGCAGAGGCACCATGGCC +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRTRRAM*SRGTMA
Trigger: GGCCATGGTGCCTCTGCTGCACATTGCCCTTCTTGT...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCACAAGAAGGGCAATGTaGAGCAGAGGCACCATGGCC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSTRRAM*SRGTMA
Trigger: GGCCATGGTGCCTCTGCTGCACATTGCCCTTCTTGT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCGGAACATCTATTATaGCCTCCTGGTTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPEHLL*PPGCSR
Trigger: CCTGCTACAACCAGGAGGGCATAATAGATGTTCCGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAAAGTTGGTGATGCCGTaGTTGGGCCCATCCCACCCG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAKLVMP*LGPSHP
Trigger: CGGGTGGGATGGGCCCAAGCACGGCATCACCAACTT...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGAGGATGCCACAAGGTTaGTCAAGGAATTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWRMPQG*SRNSST
Trigger: GGTACTGGAATTCCTTGAGCAACCTTGTGGCATCCT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTTCCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGGAA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTTCCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGGAA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGGAAGTTATCGAACGTaGTCCTACGGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKGSYRT*SYGSAS
Trigger: AGATGCAGACCCGTAGGAGCACGTTCGATAACTTCC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAACAGTGAGGAGAGACTaGGGGAAGTTATCGAACGTG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKTVRRD*GKLSNV
Trigger: CACGTTCGATAACTTCCCGCAGTCTCTCCTCACTGT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGCCTTTTCCTTAAGGTaGAGCTCAGACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLAFSLR*SSDRGR
Trigger: CCGGCCCCTGTCTGAGCTGCACCTTAAGGAAAAGGC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCTGAAGATGAAAAATaGACTGGCTTCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAEDEK*TGFRHG
Trigger: CCCATGCCGGAAGCCAGTGCATTTTTCATCTTCAGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATTCCTGAAGGAGGTGTaGTGGACGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLFLKEV*WTGSSA
Trigger: TGCTGAGGACCCCGTCCAGCACACCTCCTTCAGGAA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTTCCTGAAGGAGGTGTaGTGGACGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLFLKEV*WTGSSA
Trigger: TGCTGAGGACCCCGTCCAGCACACCTCCTTCAGGAA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATACTCTTGTTCCCCCTaGTCCTGGAAGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKYSCSP*SWKVTM
Trigger: CATTGTCACCTTCCAGGAGCAGGGGGAACAAGAGTA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTACTCTTGTTCCCCCTaGTCCTGGAAGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPYSCSP*SWKVTM
Trigger: CATTGTCACCTTCCAGGAGCAGGGGGAACAAGAGTA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCGGGAGTTCTCCTCTaGACTCATAGAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSAGVLL*THRGRA
Trigger: TGCTCTCCCTCTATGAGTGCAGAGGAGAACTCCCGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGGGTCTCCCCTTCCGTaGTGTTGCTGGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLGSPLP*CCWAQT
Trigger: AGTCTGAGCCCAGCAACAGCACGGAAGGGGAGACCC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCAGAAGACAGCAAAGCTaGTGCCACAGGGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLRRQQS*CHRGSP
Trigger: GGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCTTCT...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATCCTTTGTGAGGGCTTaGCCACCAGCCCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLSFVRA*PPAPAL
Trigger: AAGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCAATGTCATGCAAGGTaGGCAAGCCAGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLQCHAR*ASQPGG
Trigger: CCCTCCAGGCTGGCTTGCGCACCTTGCATGACATTG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGAGGAAAGTTGCCCCTaGTGTCACTCTGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKEESCP*CHSDSR
Trigger: CCTACTATCAGAGTGACAGCAGGGGCAACTTTCCTC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGAGGAAAGTTGCCCCTaGTGTCACTCTGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPEESCP*CHSDSR
Trigger: CCTACTATCAGAGTGACAGCAGGGGCAACTTTCCTC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCACCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGAGGGGGCTCAAGCCTaGCACTGCCAATGCCTGATG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLEGAQA*HCQCLM
Trigger: CATCAGGCATTGGCAGTGGCAGGCTTGAGCCCCCTC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACCTCAGACCAGGAGCTaGAGTGGATGGATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLPQTRS*SGWMGS
Trigger: GCTTCCCATCCATCCACTGCAGCTCCTGGTCTGAGG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCCGCTTCCACCAGGCTaGTGGCACTGCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLPLPPG*WHCHGT
Trigger: AGTTCCATGGCAGTGCCAGCAGCCTGGTGGAAGCGG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCATTGGCATTCATGTTaGCATGAGCTGGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRHWHSC*HELGVG
Trigger: GCCCACGCCCAGCTCATGCCAACATGAATGCCAATG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGTCCTGCAGCTGCATTaGCATTCATGTTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPVLQLH*HSCWHE
Trigger: CTCATGCCAACATGAATGCCAATGCAGCTGCAGGAC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTGGAGTTGGTGGCGTTaGAGTCGTCTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSWSWWR*SRLPER
Trigger: CCTTTCCGGAAGACGACTCCAACGCCACCAACTCCA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTCCGATGGGCAAGCCTaGCTCCACAGTTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSSDGQA*LHSFLP
Trigger: AGGGAGAAAACTGTGGAGCCAGGCTTGCCCATCGGA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGCAGCAGGGAGGCAATaGAGCGCACTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLAAGRQ*SALSSA
Trigger: TGCTGAACTCAGTGCGCTCCATTGCCTCCCTGCTGC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTCTTCCTCCTCCTTTTaGGCTGAGGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSSSSSF*AEVRLS
Trigger: GGAGAGCCTGACCTCAGCCCAAAAGGAGGAGGAAGA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLLGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCACTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLALGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTATCCTCGTTTTCACTaGGCTGGAGGTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWYPRFH*AGGHPC
Trigger: ACATGGATGACCTCCAGCCCAGTGAAAACGAGGATA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGTGTCTGGGTTGGAGTaGGGACTCTTATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPVSGLE*GLLSSF
Trigger: AAACGAGGATAAGAGTCCCCACTCCAACCCAGACAC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTTCCCCTGCAGTGTCTaGGTTGGAGTGGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSFPCSV*VGVGTL
Trigger: AAGAGTCCCCACTCCAACCCAGACACTGCAGGGGAA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTTCCCCTGCAGTGTCTaGGTTGGAGTGGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRFPCSV*VGVGTL
Trigger: AAGAGTCCCCACTCCAACCCAGACACTGCAGGGGAA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTCATTGACAATACGGTaGCACTGCAGGCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGSLTIR*HCRRNL
Trigger: CAGGTTCCGCCTGCAGTGCCACCGTATTGTCAATGA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLCGSQ*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATTGACTCCCACACAG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLCGSQ*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATTGACTCCCACACAG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCCCTTGTCTTCTGTGTaGGAGTCAATGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGPLSSV*ESMERY
Trigger: GTACCGCTCCATTGACTCCCACACAGAAGACAAGGG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACACGGTAGTTGTAGATaGGGCCCTTGTCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKHGSCR*GPCLLC
Trigger: ACACAGAAGACAAGGGCCCCATCTACAACTACCGTG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTCCACACATTGTCTCTaGTTCTTGTCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWSTHCL*FLSSSQ
Trigger: CTGTGAGCTGGACAAGAACCAGAGACAATGTGTGGA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGGCACACTTCTTGCCTaGCATGCAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSGTLLA*HAGQHD
Trigger: ATCATGCTGGCCTGCATGCCAGGCAAGAAGTGTGCC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCTGGGCTCAGACTCTaGGGCACACTTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQAGLRL*GTLLAW
Trigger: CCAGGCAAGAAGTGTGCCCCAGAGTCTGAGCCCAGC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCTGGGCTCAGACTCTaGGGCACACTTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLAGLRL*GTLLAW
Trigger: CCAGGCAAGAAGTGTGCCCCAGAGTCTGAGCCCAGC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTTTCCCAAAACCCAGTaGGGGCTGAATTCGACGGAG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGFPKTQ*GLNSTE
Trigger: CTCCGTCGAATTCAGCCCCCACTGGGTTTTGGGAAA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGTGCGCAAGCCAGCCTaGAGGGACAGTGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLVRKPA*RDSAFL
Trigger: AAGGAATGCACTGTCCCTCCAGGCTGGCTTGCGCAC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGTGCGCAAGCCAGCCTaGAGGGACAGTGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLVRKPA*RDSAFL
Trigger: AAGGAATGCACTGTCCCTCCAGGCTGGCTTGCGCAC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTCCACCAGCTTCTCATaGGACGGTGACTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGSTSFS*DGDSVS
Trigger: TGACACTGAGTCACCGTCCCATGAGAAGCTGGTGGA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATGGCATTGGAGCCCGTaGATGAGTAGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAWHWSP*MSSCWG
Trigger: CCCCCAGCAGCTACTCATCCACGGGCTCCAATGCCA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTGGCATTGGAGCCCGTaGATGAGTAGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLWHWSP*MSSCWG
Trigger: CCCCCAGCAGCTACTCATCCACGGGCTCCAATGCCA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTCTGCCCCGGCTGCCTaGAGTGACAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSAPAA*SDRGCG
Trigger: CCCACACCCCCTGTCACTCCAGGCAGCCGGGGCAGA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCTGCAGTGGATGGATaGGAAGCTGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAAVDG*EAAVEF
Trigger: AAACTCAACAGCAGCTTCCCATCCATCCACTGCAGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGCTGCAGTGGATGGATaGGAAGCTGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPAAVDG*EAAVEF
Trigger: AAACTCAACAGCAGCTTCCCATCCATCCACTGCAGC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGACCAGGAGCTGCAGTaGATGGATGGGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLDQELQ*MDGKLL
Trigger: CAGCAGCTTCCCATCCATCCACTGCAGCTCCTGGTC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGACCAGGAGCTGCAGTaGATGGATGGGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLDQELQ*MDGKLL
Trigger: CAGCAGCTTCCCATCCATCCACTGCAGCTCCTGGTC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCGTCAGCCAGCTCCTaGGTGGTGACCTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLASASS*VVTSMN
Trigger: GTTCATCGAGGTCACCACCCAGGAGCTGGCTGACGC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCAATGGGAGCTGGGCTaGGTTCCCAGGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLQWELG*VPRALE
Trigger: TTCCAGAGCCCTGGGAACCCAGCCCAGCTCCCATTG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCCACGTTTTCAGTGTTaGCAGACTCAGTCTCACTTG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPPRFQC*QTQSHL
Trigger: CAAGTGAGACTGAGTCTGTCAACACTGAAAACGTGG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTGCGCCAGTAGCGGCTaGATTTGGATTTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSCASSG*IWIWRS
Trigger: GGATCTCCAAATCCAAATTCAGCCGCTACTGGCGCA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTGCCCAGGGGAGACATaGTCTTCGTCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLCPGET*SSSPPG
Trigger: TCCTGGTGGAGACGAAGATCATGTCTCCCCTGGGCA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGGATCTGAAACACAGTaGGGAGAGACTGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSGSETQ*GETAGS
Trigger: ACTTCCCGCAGTCTCTCCTCACTGTGTTTCAGATCC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTCCCCGGTCAGGATCTaGAACACAGTGAGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLSPVRI*NTVRRD
Trigger: GTCTCTCCTCACTGTGTTTCAGATCCTGACCGGGGA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTAGGATATGGTTCCTaGAGGAGGTGTGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLLGYGS*RRCAGR
Trigger: CCGTCCAGCACACCTCCTTCAGGAACCATATCCTAG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATATTCATGGCGATTTTaGAGAGGCAGCTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKYSWRF*RGSSGH
Trigger: ATGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGCTTCACCAGGCGCATaGCCCGGAAGAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPASPGA*PGRGGR
Trigger: TCTTCCGCCTCTTCCGGGTCATGCGCCTGGTGAAGC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCACTCTGATAGTAGGTaGCATGGTTGCCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSHSDSR*HGCRTG
Trigger: GCCTGTTCGGCAACCATGTCACCTACTATCAGAGTG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLCSLSC*CAVGAG
Trigger: CCCAGCGCCCACTGCACATCAACAAGACAGGGAACA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKMNLGS*ANCPSP
Trigger: AGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCAT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPMNLGS*ANCPSP
Trigger: AGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCAT...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGGCGGCATCGATGGCTaGCTGCCAGGACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVGGIDG*LPGQCC
Trigger: GCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTTGGGTTTCCCATACTaGTGCCGCTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLLGFPY*CRFRCV
Trigger: CACACAGCGGAAGCGGCAGCAGTATGGGAAACCCAA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATTGGGTTTCCCATACTaGTGCCGCTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLLGFPY*CRFRCV
Trigger: CACACAGCGGAAGCGGCAGCAGTATGGGAAACCCAA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGCCGTGTGGCGGTTGTaGCCCCCTGCTTCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPAVWRL*PPASWV
Trigger: AACCCAAGAAGCAGGGGGGCACAACCGCCACACGGC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGGGGTCAATGTCTTCTaGCTGGGTGATCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLGVNVF*LGDPVQ
Trigger: CTGGACTGGATCACCCAGGCAGAAGACATTGACCCC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATCTCACTTGTGGGCATaGTCATGTTTCGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSHLWA*SCFEAC
Trigger: ACAAGCCTCGAAACATGAGCATGCCCACAAGTGAGA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCCTTTTCCTTAAGGTaGAGCTCAGACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLAFSLR*SSDRGR
Trigger: CCGGCCCCTGTCTGAGCTGCACCTTAAGGAAAAGGC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTGTCAAAGTCAAACTTaGTGTTCTCCCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWCQSQT*CSPSFE
Trigger: CTCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTACTCTTGTTCCCCCTaGTCCTGGAAGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGYSCSP*SWKVTM
Trigger: CATTGTCACCTTCCAGGAGCAGGGGGAACAAGAGTA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGCGGGAGTTCTCCTCTaGACTCATAGAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLAGVLL*THRGRA
Trigger: TGCTCTCCCTCTATGAGTGCAGAGGAGAACTCCCGC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTAGACAGCAAAGCTGCTaGCACAGGGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLRQQSC*HRGSPL
Trigger: AAGGGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCT...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGAGAAGACAGCAAAGCTaGTGCCACAGGGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQRRQQS*CHRGSP
Trigger: GGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCTTCT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATCCTTTGTGAGGGCTTaGCCACCAGCCCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLASFVRA*PPAPAL
Trigger: AAGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTCCTTTGTGAGGGCTTaGCCACCAGCCCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLSFVRA*PPAPAL
Trigger: AAGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCAATGTCATGCAAGGTaGGCAAGCCAGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLQCHAR*ASQPGG
Trigger: CCCTCCAGGCTGGCTTGCGCACCTTGCATGACATTG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCAGGCTGGGCTCACTaGAGTACTCGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQAGWAH*STRLLH
Trigger: GTGAAGAAGCCGAGTACTGCAGTGAGCCCAGCCTGC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCAGGCTGGGCTCACTaGAGTACTCGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAAGWAH*STRLLH
Trigger: GTGAAGAAGCCGAGTACTGCAGTGAGCCCAGCCTGC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCCTCAGACCAGGAGCTaGAGTGGATGGATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLPQTRS*SGWMGS
Trigger: GCTTCCCATCCATCCACTGCAGCTCCTGGTCTGAGG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCACTGAGGATGTTGTCTaGGGCGTTCTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSTEDVV*GVLHLL
Trigger: GAGGAGATGGAGAACGCCGCAGACAACATCCTCAGT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGCCGGGCGGCATCGATaGCTGCCTGCCAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVAGRHR*LPARTV
Trigger: CACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATGGAGTTGGTGGCGTTaGAGTCGTCTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLWSWWR*SRLPER
Trigger: CCTTTCCGGAAGACGACTCCAACGCCACCAACTCCA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCCAGGTTGGAGTTGGTaGCGTTGGAGTCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQPGWSW*RWSRLP
Trigger: CGGAAGACGACTCCAACGCCACCAACTCCAACCTGG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGTTCCAGGTTGGAGTTaGTGGCGTTGGAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSVPGWS*WRWSRL
Trigger: AAGACGACTCCAACGCCACCAACTCCAACCTGGAAC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCTTTCTCCCTCTCTTTaGAAAACTCCCCGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLSPSL*KTPRSK
Trigger: TTTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTTCTCTCGAAGCTTCTaGAAATCTCCTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPFSRSF*KSPRAL
Trigger: CAAAGCCCGAGGAGATTTCCAGAAGCTTCGAGAGAA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAACTCAGTCTCACTTGTaGGCATGCTCATGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKTQSHL*ACSCFE
Trigger: CTCGAAACATGAGCATGCCCACAAGTGAGACTGAGT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCAGCAGGGAGGCAATaGAGCGCACTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQAAGRQ*SALSSA
Trigger: TGCTGAACTCAGTGCGCTCCATTGCCTCCCTGCTGC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCAGCAGGGAGGCAATaGAGCGCACTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAAAGRQ*SALSSA
Trigger: TGCTGAACTCAGTGCGCTCCATTGCCTCCCTGCTGC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTCTTCCTCCTCCTTTTaGGCTGAGGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLSSSSF*AEVRLS
Trigger: GGAGAGCCTGACCTCAGCCCAAAAGGAGGAGGAAGA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGTTTCTTTTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSVSFLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAAAAGAAAC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTGCAGTGTCTGGGTTaGAGTGGGGACTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLQCLG*SGDSYP
Trigger: AGGATAAGAGTCCCCACTCCAACCCAGACACTGCAG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATTCCCCTGCAGTGTCTaGGTTGGAGTGGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLFPCSV*VGVGTL
Trigger: AAGAGTCCCCACTCCAACCCAGACACTGCAGGGGAA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCATTGCCTAGGATATaGTTCCTGAAGGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGALPRI*FLKEVC
Trigger: GCACACCTCCTTCAGGAACCATATCCTAGGCAATGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTTGATCGCGCTGGACTaGATGCCAAAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLIALD*MPKEMR
Trigger: CCTCATCTCCTTTGGCATCCAGTCCAGCGCGATCAA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLLCGSQ*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATTGACTCCCACACAG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCCTTGTCTTCTGTGTaGGAGTCAATGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPLSSV*ESMERY
Trigger: GTACCGCTCCATTGACTCCCACACAGAAGACAAGGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATCCACACATTGTCTCTaGTTCTTGTCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSTHCL*FLSSSQ
Trigger: CTGTGAGCTGGACAAGAACCAGAGACAATGTGTGGA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGACTTTGTACTGGTGCTaGTTCTTGGGGATGTACCTT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWTLYWC*FLGMYL
Trigger: AAGGTACATCCCCAAGAACCAGCACCAGTACAAAGT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATACCACACTTTGTACTaGTGCTGGTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKYHTLY*CWFLGM
Trigger: CATCCCCAAGAACCAGCACCAGTACAAAGTGTGGTA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTCAGAGGCATGTTCATaGACACCAGGCGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSSEACS*TPGVCR
Trigger: CCTGCAAACGCCTGGTGTCCATGAACATGCCTCTGA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST0