RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNA1C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000051331

Ensembl transcript IDs: ENSMUST00000075591.13, ENSMUST00000078320.14, ENSMUST00000112790.9, ENSMUST00000112793.10, ENSMUST00000112825.9, ENSMUST00000185345.7, ENSMUST00000186889.7, ENSMUST00000187317.7, ENSMUST00000187386.7, ENSMUST00000187474.7, ENSMUST00000187940.7, ENSMUST00000188078.7, ENSMUST00000188106.7, ENSMUST00000188522.7, ENSMUST00000188865.7, ENSMUST00000189389.7, ENSMUST00000189520.7, ENSMUST00000190285.2, ENSMUST00000219018.2, ENSMUST00000219223.2, ENSMUST00000219833.2, ENSMUST00000220022.2, ENSMUST00000239204.2

Found 2079 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTaGCATAGATCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTC +
Preference number: 1 (lower is better)
Translates to: LAATSRLLLGALAHS*HRSLGPCSIETARL
Trigger: GAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR TCA 90 bp GGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGGAAAGAGTCCCTaGAGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCA +
Preference number: 1 (lower is better)
Translates to: GSCHLHLSSLQGKSP*RDHRDQTCTAGNLA
Trigger: TGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCTTCAGGGACTCTTTCCCTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR TCA 90 bp AAGCAGTCTGTGGGTATGGCTGGTGAAAGGAGGGTGGGTTGGGCATaGCACTGGGCAGAGTTCTGGCGGGGGATGCTGGGACTCAGCTTG +
Preference number: 1 (lower is better)
Translates to: KQSVGMAGERRVGWA*HWAEFWRGMLGLSL
Trigger: CAAGCTGAGTCCCAGCATCCCCCGCCAGAACTCTGCCCAGTGTCATGCCCAACCCACCCTCCTTTCACCAGCCATACCCACAGACTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp GCACAAGGAGAAAGCAGTCTGTGGGTATGGCTGGTGAAAGGAGGGTaGGTTGGGCATGACACTGGGCAGAGTTCTGGCGGGGGATGCTGG +
Preference number: 1 (lower is better)
Translates to: AQGESSLWVWLVKGG*VGHDTGQSSGGGCW
Trigger: CCAGCATCCCCCGCCAGAACTCTGCCCAGTGTCATGCCCAACCCACCCTCCTTTCACCAGCCATACCCACAGACTGCTTTCTCCTTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp GTGAGAGCCAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTTaGCAGACACAGTGGAGGGGCATCCCAGGGCCAGGCAAGGGCCAC +
Preference number: 1 (lower is better)
Translates to: VRAKLPQLLLHWQIL*QTQWRGIPGPGKGH
Trigger: GTGGCCCTTGCCTGGCCCTGGGATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCTCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp CTCCGTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTACCTCCAGGTCACGAGAACAGTGAGG +
Preference number: 1 (lower is better)
Translates to: LRTPPSSEAYPDSSE*RRCSGYLQVTRTVR
Trigger: CCTCACTGTTCTCGTGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTACGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR TCA 90 bp CAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTGGTaGAAGGAGGGTGGGTTGGGCATGACACTGGGCAGAGTTCTGGCG +
Preference number: 1 (lower is better)
Translates to: QFPWHKEKAVCGYGW*KEGGLGMTLGRVLA
Trigger: CGCCAGAACTCTGCCCAGTGTCATGCCCAACCCACCCTCCTTTCACCAGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 90 bp GATTTCAAGTCTGAGGGGCTGGTGCAGCTGTGGATGTGTGTGGTGTaGAGAACAGAAAGGTGCCCACAGTTCAAGGGTCACCGTGATGCC +
Preference number: 1 (lower is better)
Translates to: DFKSEGLVQLWMCVV*RTERCPQFKGHRDA
Trigger: GGCATCACGGTGACCCTTGAACTGTGGGCACCTTTCTGTTCTGCACACCACACACATCCACAGCTGCACCAGCCCCTCAGACTTGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp CTCCCCCAACTACTTCTCCATTGGCAAATTCTTTGGCAGACACAGTaGAGGGGCATCCCAGGGCCAGGCAAGGGCCACATTTCTCTAGCT +
Preference number: 1 (lower is better)
Translates to: LPQLLLHWQILWQTQ*RGIPGPGKGHISLA
Trigger: AGCTAGAGAAATGTGGCCCTTGCCTGGCCCTGGGATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp GGACCTTATCGAGTGAGAGCCAAGCTCCCCCAACTACTTCTCCATTaGCAAATTCTTTGGCAGACACAGTGGAGGGGCATCCCAGGGCCA +
Preference number: 1 (lower is better)
Translates to: GPYRVRAKLPQLLLH*QILWQTQWRGIPGP
Trigger: TGGCCCTGGGATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCTCTCACTCGATAAGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp AGGTGGATTTCAAGTCTGAGGGGCTGGTGCAGCTGTGGATGTGTGTaGTGTGCAGAACAGAAAGGTGCCCACAGTTCAAGGGTCACCGTG +
Preference number: 1 (lower is better)
Translates to: RWISSLRGWCSCGCV*CAEQKGAHSSRVTV
Trigger: CACGGTGACCCTTGAACTGTGGGCACCTTTCTGTTCTGCACACCACACACATCCACAGCTGCACCAGCCCCTCAGACTTGAAATCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp CAGAGAAGAGCAGAAGACAGCAGAAGAGCTGGGTGGAACACGTCCTaGCCTCGAAAAGCAAGATTCGGCATGGGCAACCTTACCACTGGG +
Preference number: 1 (lower is better)
Translates to: QRRAEDSRRAGWNTS*PRKARFGMGNLTTG
Trigger: CCCAGTGGTAAGGTTGCCCATGCCGAATCTTGCTTTTCGAGGTCAGGACGTGTTCCACCCAGCTCTTCTGCTGTCTTCTGCTCTTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp TGTATCTGTTTCTTTCATCCCTGTGAGATCCTGGTGCTCCCACCCTaGTCTCGATCCCATGCTTCTCTGCCTCCCTGCTTCAGGAGATGG +
Preference number: 1 (lower is better)
Translates to: CICFFHPCEILVLPP*SRSHASLPPCFRRW
Trigger: CCATCTCCTGAAGCAGGGAGGCAGAGAAGCATGGGATCGAGACCAGGGTGGGAGCACCAGGATCTCACAGGGATGAAAGAAACAGATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp GCTACTTCAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATaGCTGGTGAAAGGAGGGTGGGTTGGGCATGACACTGGGCAGAGT +
Preference number: 1 (lower is better)
Translates to: ATSVSLAQGESSLWV*LVKGGWVGHDTGQS
Trigger: ACTCTGCCCAGTGTCATGCCCAACCCACCCTCCTTTCACCAGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp TGTGGTGTGCAGAACAGAAAGGTGCCCACAGTTCAAGGGTCACCGTaGTGCCTTCTAGGGGGCCCTTTGCAGGGACCACTTGCTTATAAA +
Preference number: 1 (lower is better)
Translates to: CGVQNRKVPTVQGSP*CLLGGPLQGPLAYK
Trigger: TTTATAAGCAAGTGGTCCCTGCAAAGGGCCCCCTAGAAGGCATCACGGTGACCCTTGAACTGTGGGCACCTTTCTGTTCTGCACACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 90 bp TGCTGTGACAGTGCTTGGGAAAGCCAGCCACCTCTTCCCACGGGATaGTGGAACATTGGACAAGAATCCACAGAGAAGAGCAGAAGACAG +
Preference number: 1 (lower is better)
Translates to: CCDSAWESQPPLPTG*WNIGQESTEKSRRQ
Trigger: CTGTCTTCTGCTCTTCTCTGTGGATTCTTGTCCAATGTTCCAGCATCCCGTGGGAAGAGGTGGCTGGCTTTCCCAAGCACTGTCACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 90 bp TGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCCATaGCTCTGGGAACAGGCATGGCACATGACAGGTTTTCTTGGGGAC +
Preference number: 1 (lower is better)
Translates to: WAGVYEWSRGLFIFP*LWEQAWHMTGFLGD
Trigger: GTCCCCAAGAAAACCTGTCATGTGCCATGCCTGTTCCCAGAGGCATGGAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp TGCTTGGGAAAGCCAGCCACCTCTTCCCACGGGATGCTGGAACATTaGACAAGAATCCACAGAGAAGAGCAGAAGACAGCAGAAGAGCTG +
Preference number: 1 (lower is better)
Translates to: CLGKPATSSHGMLEH*TRIHREEQKTAEEL
Trigger: CAGCTCTTCTGCTGTCTTCTGCTCTTCTCTGTGGATTCTTGTCCAATGTTCCAGCATCCCGTGGGAAGAGGTGGCTGGCTTTCCCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp TGTGACAGTGCTTGGGAAAGCCAGCCACCTCTTCCCACGGGATGCTaGAACATTGGACAAGAATCCACAGAGAAGAGCAGAAGACAGCAG +
Preference number: 1 (lower is better)
Translates to: CDSAWESQPPLPTGC*NIGQESTEKSRRQQ
Trigger: CTGCTGTCTTCTGCTCTTCTCTGTGGATTCTTGTCCAATGTTCCAGCATCCCGTGGGAAGAGGTGGCTGGCTTTCCCAAGCACTGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp CATCCAGTGACTGCTCACCAGCTCCCAACTATGGCTGTCTGTGTTTaGGCTAATCATGGGTCAAAGGTGAGTCTATCCCACCACTGTCCC +
Preference number: 1 (lower is better)
Translates to: HPVTAHQLPTMAVCV*ANHGSKVSLSHHCP
Trigger: GGGACAGTGGTGGGATAGACTCACCTTTGACCCATGATTAGCCCAAACACAGACAGCCATAGTTGGGAGCTGGTGAGCAGTCACTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp TCACGGAGGGAAGTTTTCCTTAGTAACACTGGCAGGCTGAATTTCTaGGAGCAGCAGACATTGCAGCACTCACTCCAGGGCTCTGCCATC +
Preference number: 1 (lower is better)
Translates to: SRREVFLSNTGRLNF*EQQTLQHSLQGSAI
Trigger: GATGGCAGAGCCCTGGAGTGAGTGCTGCAATGTCTGCTGCTCTCAGAAATTCAGCCTGCCAGTGTTACTAAGGAAAACTTCCCTCCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp ACCACACAGAAGAGCTTTCCATACAGTGAGATGACCTGGTGGTGGTaGGGTTTAAGGCTTGACCTTTCCTCACTCCCCACCCCTCTAGTT +
Preference number: 1 (lower is better)
Translates to: TTQKSFPYSEMTWWW*GLRLDLSSLPTPLV
Trigger: AACTAGAGGGGTGGGGAGTGAGGAAAGGTCAAGCCTTAAACCCCACCACCACCAGGTCATCTCACTGTATGGAAAGCTCTTCTGTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp GACCCTTTTCACGGAGGGAAGTTTTCCTTAGTAACACTGGCAGGCTaGATTTCTGAGAGCAGCAGACATTGCAGCACTCACTCCAGGGCT +
Preference number: 1 (lower is better)
Translates to: DPFHGGKFSLVTLAG*ISESSRHCSTHSRA
Trigger: AGCCCTGGAGTGAGTGCTGCAATGTCTGCTGCTCTCAGAAATTCAGCCTGCCAGTGTTACTAAGGAAAACTTCCCTCCGTGAAAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp ATTGGACAAGAATCCACAGAGAAGAGCAGAAGACAGCAGAAGAGCTaGGTGGAACACGTCCTGACCTCGAAAAGCAAGATTCGGCATGGG +
Preference number: 1 (lower is better)
Translates to: IGQESTEKSRRQQKS*VEHVLTSKSKIRHG
Trigger: CCCATGCCGAATCTTGCTTTTCGAGGTCAGGACGTGTTCCACCCAGCTCTTCTGCTGTCTTCTGCTCTTCTCTGTGGATTCTTGTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp CGATCCCATGCTTCTCTGCCTCCCTGCTTCAGGAGATGGAAAGGATaGATAGTTTTTACAAGGGCTACAGTTCCATCCAGTGACTGCTCA +
Preference number: 1 (lower is better)
Translates to: RSHASLPPCFRRWKG*IVFTRATVPSSDCS
Trigger: TGAGCAGTCACTGGATGGAACTGTAGCCCTTGTAAAAACTATTCATCCTTTCCATCTCCTGAAGCAGGGAGGCAGAGAAGCATGGGATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp GGGGTTTGTCACTTGGCCTCTACTCACCAGCCACGTTCTTTCTACTaGTTTCCTGACTGTTCCAGGAATGTGCTGACTTTGGCAAAGGAA +
Preference number: 1 (lower is better)
Translates to: GVCHLASTHQPRSFY*FPDCSRNVLTLAKE
Trigger: TTCCTTTGCCAAAGTCAGCACATTCCTGGAACAGTCAGGAAATCAGTAGAAAGAACGTGGCTGGTGAGTAGAGGCCAAGTGACAAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp TCGAGCAGATTCTCACATGATCTCCATAAAAGGCTGGTAGGTCACTaGGACTGGAAGATACTCCGTAGGCAAAATCTGAGCGAATGGTTG +
Preference number: 1 (lower is better)
Translates to: SSRFSHDLHKRLVGH*DWKILRRQNLSEWL
Trigger: CAACCATTCGCTCAGATTTTGCCTACGGAGTATCTTCCAGTCCCAGTGACCTACCAGCCTTTTATGGAGATCATGTGAGAATCTGCTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp TTGGAACCAAGGCACCAGAGGAGGGTAAAAGACACAGTTGGGCCTTaGGTTCCTAGTCAGATTAAGAAGATGGGAACCCCAACTAATAGA +
Preference number: 1 (lower is better)
Translates to: LEPRHQRRVKDTVGP*VPSQIKKMGTPTNR
Trigger: TCTATTAGTTGGGGTTCCCATCTTCTTAATCTGACTAGGAACCCAAGGCCCAACTGTGTCTTTTACCCTCCTCTGGTGCCTTGGTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp TATGGACACAAGTGTGACACAAAGATGCCCATATTTCTTCTCTCTTaGACCAGTCCATATGCCCAGCACAGAAAGGAGCCCAGCTCAATC +
Preference number: 1 (lower is better)
Translates to: YGHKCDTKMPIFLLS*TSPYAQHRKEPSSI
Trigger: GATTGAGCTGGGCTCCTTTCTGTGCTGGGCATATGGACTGGTTCAAGAGAGAAGAAATATGGGCATCTTTGTGTCACACTTGTGTCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR GCA 90 bp GGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATaGCCATATTTCTTCTCTCTTGAACCAGTCCATATGCCCAGCACA +
Preference number: 1 (lower is better)
Translates to: GCTYAHTMDTSVTQR*PYFFSLEPVHMPST
Trigger: TGTGCTGGGCATATGGACTGGTTCAAGAGAGAAGAAATATGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CCA 90 bp TTATGGGTGCTACAAAGGCTGCATAAATGCTCGGTCAACCACATATaGAAATCCAAGGAGAAAGGCTGTTTCTACACTCCGCTTAACCCC +
Preference number: 1 (lower is better)
Translates to: LWVLQRLHKCSVNHI*KSKEKGCFYTPLNP
Trigger: GGGGTTAAGCGGAGTGTAGAAACAGCCTTTCTCCTTGGATTTCCATATGTGGTTGACCGAGCATTTATGCAGCCTTTGTAGCACCCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp ATCTCAGTTGAGACTACTCACAGCACTGAATTGATTTGCAATGCTTaGTCTGTTCAGCTCCATTCTCCAACTCCCTTCCCGAGATGGCTT +
Preference number: 1 (lower is better)
Translates to: ISVETTHSTELICNA*SVQLHSPTPFPRWL
Trigger: AAGCCATCTCGGGAAGGGAGTTGGAGAATGGAGCTGAACAGATCAAGCATTGCAAATCAATTCAGTGCTGTGAGTAGTCTCAACTGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 90 bp GAATTTCTGAGAGCAGCAGACATTGCAGCACTCACTCCAGGGCTCTaGCATCCATTTTTCAAAGACTATTTCTTCCCACAGGTTGTTCTT +
Preference number: 1 (lower is better)
Translates to: EFLRAADIAALTPGL*HPFFKDYFFPQVVL
Trigger: AAGAACAACCTGTGGGAAGAAATAGTCTTTGAAAAATGGATGGCAGAGCCCTGGAGTGAGTGCTGCAATGTCTGCTGCTCTCAGAAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp AGATTCTCACATGATCTCCATAAAAGGCTGGTAGGTCACTGGGACTaGAAGATACTCCGTAGGCAAAATCTGAGCGAATGGTTGAGTCTT +
Preference number: 1 (lower is better)
Translates to: RFSHDLHKRLVGHWD*KILRRQNLSEWLSL
Trigger: AAGACTCAACCATTCGCTCAGATTTTGCCTACGGAGTATCTTCCAGTCCCAGTGACCTACCAGCCTTTTATGGAGATCATGTGAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp GCGGGGGATGCTGGGACTCAGCTTGTAGCTTATATCTTTGATCAATaGGATCTGGCAATGCAGATCAAAGTGTTCAAAGGAAGATACAAG +
Preference number: 1 (lower is better)
Translates to: AGDAGTQLVAYIFDQ*DLAMQIKVFKGRYK
Trigger: CTTGTATCTTCCTTTGAACACTTTGATCTGCATTGCCAGATCCCATTGATCAAAGATATAAGCTACAAGCTGAGTCCCAGCATCCCCCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp ACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTaGCACAAAGATGCCCATATTTCTTCTCTCTTGAACCAGTCCATA +
Preference number: 1 (lower is better)
Translates to: TYHVGAHTHILWTQV*HKDAHISSLLNQSI
Trigger: TATGGACTGGTTCAAGAGAGAAGAAATATGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR GCA 90 bp GCCAAATTTGCAAGAATTGCCTCATTTATGTTGGATCAAGTGGCATaGCACCTATTCTGTAAGCCTTGCCCCATCAAGTGGTTTGCATTC +
Preference number: 1 (lower is better)
Translates to: AKFARIASFMLDQVA*HLFCKPCPIKWFAF
Trigger: GAATGCAAACCACTTGATGGGGCAAGGCTTACAGAATAGGTGGCATGCCACTTGATCCAACATAAATGAGGCAATTCTTGCAAATTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp TTTGAAGATACGAACAACCTAGGACCAGGCAGAAAGGGATTTAACTaGACTTGTCTGTTACTTGGACTGTGTCATGGACACACACACACA +
Preference number: 1 (lower is better)
Translates to: FEDTNNLGPGRKGFN*TCLLLGLCHGHTHT
Trigger: TGTGTGTGTGTGTCCATGACACAGTCCAAGTAACAGACAAGTCCAGTTAAATCCCTTTCTGCCTGGTCCTAGGTTGTTCGTATCTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp AAGGTGCCAAATTTGCAAGAATTGCCTCATTTATGTTGGATCAAGTaGCATGCCACCTATTCTGTAAGCCTTGCCCCATCAAGTGGTTTG +
Preference number: 1 (lower is better)
Translates to: KVPNLQELPHLCWIK*HATYSVSLAPSSGL
Trigger: CAAACCACTTGATGGGGCAAGGCTTACAGAATAGGTGGCATGCCACTTGATCCAACATAAATGAGGCAATTCTTGCAAATTTGGCACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 90 bp TTGCAGGGACCACTTGCTTATAAACCATCTGTCCTTAATTACCAATaGTTTCTCCCTACTTTTAACTTTGGTGTGTTTCTCCATGCTGGG +
Preference number: 1 (lower is better)
Translates to: LQGPLAYKPSVLNYQ*FLPTFNFGVFLHAG
Trigger: CCCAGCATGGAGAAACACACCAAAGTTAAAAGTAGGGAGAAACCATTGGTAATTAAGGACAGATGGTTTATAAGCAAGTGGTCCCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 90 bp CATCTAATTATTATCTCTAGAAGCCCTTATGGGTGCTACAAAGGCTaGATAAATGCTCGGTCAACCACATATGGAAATCCAAGGAGAAAG +
Preference number: 1 (lower is better)
Translates to: HLIIISRSPYGCYKG*INARSTTYGNPRRK
Trigger: CTTTCTCCTTGGATTTCCATATGTGGTTGACCGAGCATTTATGCAGCCTTTGTAGCACCCATAAGGGCTTCTAGAGATAATAATTAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 90 bp CCCAGCTGCAGGCTAATTCTGCTGCCATCCAGAAATTGTCAGGATTaGAGAAGGTTTGATAATTATGTTCAAAACAGTCATTGGGAAAAT +
Preference number: 1 (lower is better)
Translates to: PSCRLILLPSRNCQD*RRFDNYVQNSHWEN
Trigger: ATTTTCCCAATGACTGTTTTGAACATAATTATCAAACCTTCTGCAATCCTGACAATTTCTGGATGGCAGCAGAATTAGCCTGCAGCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 90 bp ACAAACAAACAAACAAATAAACAAAAACATTGTGAGAATCTCCAGTaGGTTCCTTTCACCTCTGTTCCCTTCACTGGGTTTGTAGAGGAA +
Preference number: 1 (lower is better)
Translates to: TNKQTNKQKHCENLQ*VPFTSVPFTGFVEE
Trigger: TTCCTCTACAAACCCAGTGAAGGGAACAGAGGTGAAAGGAACTCACTGGAGATTCTCACAATGTTTTTGTTTATTTGTTTGTTTGTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGCTCAGGGGTGGGGGTaGGGTCCTTTGGGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLAQGWG*GPLGGA
Trigger: AGCACCGCCCAAAGGACCCCACCCCCACCCCTGAGC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCTCAGGGGTGGGGGTaGGGTCCTTTGGGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLAQGWG*GPLGGA
Trigger: AGCACCGCCCAAAGGACCCCACCCCCACCCCTGAGC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCTCAGGGGTGGGGGTaGGGTCCTTTGGGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQAQGWG*GPLGGA
Trigger: AGCACCGCCCAAAGGACCCCACCCCCACCCCTGAGC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCAGATCCCTGGGGCCCTaGTCCATAGAGACGGCCAGG +
Preference number: 2 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLRSLGP*SIETAR
Trigger: CCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGATCT...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTAGATCCCTGGGGCCCTaGTCCATAGAGACGGCCAGG +
Preference number: 2 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLRSLGP*SIETAR
Trigger: CCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGATCT...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATCCTACTGGGGGCGCTaGCCCATTCCTGCCATAGAT +
Preference number: 2 (lower is better)
Translates to: GGWCDLHWLLPPASQLLASYWGR*PIPAID
Trigger: ATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: GGWCDLHWLLPPASQLLALSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CAA 90 bp AGTGAGAGCCAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTaGGCAGACACAGTGGAGGGGCATCCCAGGGCCAGGCAAGGGCCA +
Preference number: 2 (lower is better)
Translates to: SESQAPPTTSPLANS*ADTVEGHPRARQGP
Trigger: TGGCCCTTGCCTGGCCCTGGGATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCTCTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGAGGTCACGAGAACAGTaGGGCACTTCTGAAACGAAC +
Preference number: 2 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQRSREQ*GTSETN
Trigger: GTTCGTTTCAGAAGTGCCTCACTGTTCTCGTGACCT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTAGGTCACGAGAACAGTaGGGCACTTCTGAAACGAAC +
Preference number: 2 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLRSREQ*GTSETN
Trigger: GTTCGTTTCAGAAGTGCCTCACTGTTCTCGTGACCT...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCAGAACATGTGCAAATaGCTGTTTATACAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRQNMCK*LFIQAR
Trigger: CCTTGCTTGTATAAACAGTCATTTGCACATGTTCTG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp CTTAACATCAGCTTCCGTGGGCTTGGAGTAGCTCTTTTGAAATCCAGACACTCCAGATCCCTGGGGCCCTaGTCCATAGAGACGGCCAGG +
Preference number: 2 (lower is better)
Translates to: LNISFRGLGVALLKSRHSRSLGP*SIETAR
Trigger: CCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGATCT...GGAGTGTCTGGATTTCAAAAGAGCTACTCCAAGCCCACGGAAGCTGATGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGCTCAGGGGTGGGGGTaGGGTCCTTTGGGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTAQGWG*GPLGGA
Trigger: AGCACCGCCCAAAGGACCCCACCCCCACCCCTGAGC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCAGAACATGTGCAAATaGCTGTTTATACAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQQNMCK*LFIQAR
Trigger: CCTTGCTTGTATAAACAGTCATTTGCACATGTTCTG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCTTCCATACAGTGAGATaGCCTGGTGGTGGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFFHTVR*PGGGGV
Trigger: AACCCCACCACCACCAGGTCATCTCACTGTATGGAA...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAACAGGGAAAGAGTCCCTaGAGGGACCATAGGGACCAG +
Preference number: 2 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQQGKSP*RDHRDQ
Trigger: CTGGTCCCTATGGTCCCTTCAGGGACTCTTTCCCTG...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCAGAGCTGGGGCTTGTTaGAGAACAGAATTGGTCAGG +
Preference number: 2 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFRAGAC*RTELVR
Trigger: CCTGACCAATTCTGTTCTTCAACAAGCCCCAGCTCT...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGCTGGCTCCTGCCACCTaGATCTCAGCTCCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: SWDRKMQLPILVSEAEAELAPAT*ISAPCR
Trigger: CCTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAG...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCCCTCTTCCCACGGGATaGTGGAACATTGGACAAGAA +
Preference number: 2 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFPLPTG*WNIGQE
Trigger: TTCTTGTCCAATGTTCCAGCATCCCGTGGGAAGAGG...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR GCA 90 bp CTTAACATCAGCTTCCGTGGGCTTGGAGTAGCTCTTTTGAAATCCAGACACTCCCCTGTGAGATCCTGGTaGTCCCACCCTGGTCTCGAT +
Preference number: 2 (lower is better)
Translates to: LNISFRGLGVALLKSRHSPVRSW*SHPGLD
Trigger: ATCGAGACCAGGGTGGGAGCACCAGGATCTCACAGG...GGAGTGTCTGGATTTCAAAAGAGCTACTCCAAGCCCACGGAAGCTGATGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGCTCAGGGGTGGGGGTaGGGTCCTTTGGGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVAQGWG*GPLGGA
Trigger: AGCACCGCCCAAAGGACCCCACCCCCACCCCTGAGC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATCCTACTGGGGGCGCTaGCCCATTCCTGCCATAGAT +
Preference number: 2 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQSYWGR*PIPAID
Trigger: ATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTCCTACTGGGGGCGCTaGCCCATTCCTGCCATAGAT +
Preference number: 2 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWSYWGR*PIPAID
Trigger: ATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGGGTGGGGGTGGCGGTaGGGGTGGACCGCACCATTT +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVGWGWR*GWTAPF
Trigger: AAATGGTGCGGTCCACCCCCACCGCCACCCCCACCC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp AAAGGCTACTTCAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTATCCCTGTGAGATCCTaGTGCTCCCACCCTGGTCTC +
Preference number: 2 (lower is better)
Translates to: KGYFSFLGTRRKQSVGMAIPVRS*CSHPGL
Trigger: GAGACCAGGGTGGGAGCACCAGGATCTCACAGGGAT...AGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CAA 90 bp AAGTGGCATGCCACCTATTCTGTAAGCCTTGCCCCATCAAGTGGTTaGCATTCTGGGGGAATTGCAGGCCCTAGGATTTCTCATGAGGAC +
Preference number: 2 (lower is better)
Translates to: KWHATYSVSLAPSSG*HSGGIAGPRISHED
Trigger: GTCCTCATGAGAAATCCTAGGGCCTGCAATTCCCCCAGAATGCAAACCACTTGATGGGGCAAGGCTTACAGAATAGGTGGCATGCCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGCAGGGAAAGAGTCCCTaGAGGGACCATAGGGACCAG +
Preference number: 2 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQQGKSP*RDHRDQ
Trigger: CTGGTCCCTATGGTCCCTTCAGGGACTCTTTCCCTG...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCTGGCTCCTGCCACCTaGATCTCAGCTCCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTLAPAT*ISAPCR
Trigger: CCTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGATCTGCACTGGCTCCTaGCACCTGCATCTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEICTGS*HLHLSS
Trigger: GGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGAT...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTCCTACTGGGGGCGCTaGCCCATTCCTGCCATAGAT +
Preference number: 2 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQSYWGR*PIPAID
Trigger: ATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp AAAGGCTACTTCAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTTGGTGTGATCTGCACTaGCTCCTGCCACCTGCATCT +
Preference number: 2 (lower is better)
Translates to: KGYFSFLGTRRKQSVGMAWCDLH*LLPPAS
Trigger: AGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCA...AGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGGGTGGGGGTGGCGGTaGGGGTGGACCGCACCATTT +
Preference number: 2 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKGWGWR*GWTAPF
Trigger: AAATGGTGCGGTCCACCCCCACCGCCACCCCCACCC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp AAAGGCTACTTCAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTTCTGGCGGGGGATGCTaGGACTCAGCTTGTAGCTTA +
Preference number: 2 (lower is better)
Translates to: KGYFSFLGTRRKQSVGMASGGGC*DSACSL
Trigger: TAAGCTACAAGCTGAGTCCCAGCATCCCCCGCCAGA...AGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCAGGGAAAGAGTCCCTaGAGGGACCATAGGGACCAG +
Preference number: 2 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTQGKSP*RDHRDQ
Trigger: CTGGTCCCTATGGTCCCTTCAGGGACTCTTTCCCTG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp AGCCAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTTGGCAGACACAGTGGTTCCATCCAGTGACTaGTCACCAGCTCCCAACTAT +
Preference number: 2 (lower is better)
Translates to: SQAPPTTSPLANSLADTVVPSSD*SPAPNY
Trigger: ATAGTTGGGAGCTGGTGAGCAGTCACTGGATGGAAC...CACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGTGGTGTGATCTGCACTaGCTCCTGCCACCTGCATCT +
Preference number: 2 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEWCDLH*LLPPAS
Trigger: AGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCA...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTGGTGTGATCTGCACTaGCTCCTGCCACCTGCATCT +
Preference number: 2 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQWCDLH*LLPPAS
Trigger: AGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCTTGCCTCATTTATGTTaGATCAAGTGGCATGCCACC +
Preference number: 2 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFLPHLC*IKWHAT
Trigger: GGTGGCATGCCACTTGATCCAACATAAATGAGGCAA...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGAGGTCACGAGAACAGTaGGGCACTTCTGAAACGAAC +
Preference number: 2 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWRSREQ*GTSETN
Trigger: GTTCGTTTCAGAAGTGCCTCACTGTTCTCGTGACCT...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCTTTCTACTGATTTCCTaGCTGTTCCAGGAATGTGCT +
Preference number: 2 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFFLLIS*LFQECA
Trigger: AGCACATTCCTGGAACAGTCAGGAAATCAGTAGAAA...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAAGATCCCTGGGGCCCTaGTCCATAGAGACGGCCAGG +
Preference number: 2 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKRSLGP*SIETAR
Trigger: CCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGATCT...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCTGGCTCCTGCCACCTaGATCTCAGCTCCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPLAPAT*ISAPCR
Trigger: CCTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTACTGGCTCCTGCCACCTaGATCTCAGCTCCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVLAPAT*ISAPCR
Trigger: CCTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAG...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp CCTCTAGTTCTCTTGCTGCTGACACCTGTTTCAGAGCTGGGGCTTGTTGAAGAAGGCCATCCTTCTCCTTaGAGATGTCTGAAAACTGGT +
Preference number: 2 (lower is better)
Translates to: PLVLLLLTPVSELGLVEEGHPSP*RCLKTG
Trigger: ACCAGTTTTCAGACATCTCCAAGGAGAAGGATGGCC...TTCTTCAACAAGCCCCAGCTCTGAAACAGGTGTCAGCAGCAAGAGAACTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CAA 90 bp CCTAGATCCTTGTTCTCTAGGCCCAAATTTAGGAGCAGTAGGGGTTaGTCACTTGGCCTCTACTCACCAGCCACGTTCTTTCTACTGATT +
Preference number: 2 (lower is better)
Translates to: PRSLFSRPKFRSSRG*SLGLYSPATFFLLI
Trigger: AATCAGTAGAAAGAACGTGGCTGGTGAGTAGAGGCCAAGTGACAAACCCCTACTGCTCCTAAATTTGGGCCTAGAGAACAAGGATCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGAGGTCACGAGAACAGTaGGGCACTTCTGAAACGAAC +
Preference number: 2 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQRSREQ*GTSETN
Trigger: GTTCGTTTCAGAAGTGCCTCACTGTTCTCGTGACCT...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGAGGTCACGAGAACAGTaGGGCACTTCTGAAACGAAC +
Preference number: 2 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLRSREQ*GTSETN
Trigger: GTTCGTTTCAGAAGTGCCTCACTGTTCTCGTGACCT...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAATCTGCACTGGCTCCTaGCACCTGCATCTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVICTGS*HLHLSS
Trigger: GGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGAT...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTTGAACCAGTCCATATaGCCAGCACAGAAAGGAGCC +
Preference number: 2 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQLNQSI*PAQKGA
Trigger: GGCTCCTTTCTGTGCTGGGCATATGGACTGGTTCAA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCATGACATTTCATATCTaGACCAAGTTTTACCTGGCC +
Preference number: 2 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFMTFHI*TKFYLA
Trigger: GGCCAGGTAAAACTTGGTGCAGATATGAAATGTCAT...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATCCTACTGGGGGCGCTaGCCCATTCCTGCCATAGAT +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVSYWGR*PIPAID
Trigger: ATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CCA 90 bp AGCCAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTTGGCAGACACAGTGGAGGAACATCCTTGCTaGAATTTCGAGCAGATTCTC +
Preference number: 2 (lower is better)
Translates to: SQAPPTTSPLANSLADTVEEHPC*NFEQIL
Trigger: GAGAATCTGCTCGAAATTCCAGCAAGGATGTTCCTC...CACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CCA 90 bp CCTCTAGTTCTCTTGCTGCTGACACCTGTTTCAGAGCTGGGGCTTGTTGAAGAAGACTTGTCTGTTACTTaGACTGTGTCATGGACACAC +
Preference number: 2 (lower is better)
Translates to: PLVLLLLTPVSELGLVEEDLSVT*TVSWTH
Trigger: GTGTGTCCATGACACAGTCCAAGTAACAGACAAGTC...TTCTTCAACAAGCCCCAGCTCTGAAACAGGTGTCAGCAGCAAGAGAACTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTACCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACAGGGAAAGAGTCCCTaGAGGGACCATAGGGACCAG +
Preference number: 2 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKQGKSP*RDHRDQ
Trigger: CTGGTCCCTATGGTCCCTTCAGGGACTCTTTCCCTG...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGAGATCCCTGGGGCCCTaGTCCATAGAGACGGCCAGG +
Preference number: 2 (lower is better)
Translates to: IQSNQIRLKYANANVETVRSLGP*SIETAR
Trigger: CCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGATCT...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAATCTGCACTGGCTCCTaGCACCTGCATCTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKICTGS*HLHLSS
Trigger: GGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGAT...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCACAGAACATGTGCAAATaGCTGTTTATACAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPQNMCK*LFIQAR
Trigger: CCTTGCTTGTATAAACAGTCATTTGCACATGTTCTG...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp GACCAGGCAGAAAGGGATTTAACTGGACTTGTCTGTTACTTGGACTGTGTCATGAAAGTCGCAACATGCTaGCAAGAACCCTCAAACCAT +
Preference number: 2 (lower is better)
Translates to: DQAERDLTGLVCYLDCVMKVATC*QEPSNH
Trigger: ATGGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTT...CATGACACAGTCCAAGTAACAGACAAGTCCAGTTAAATCCCTTTCTGCCTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCAAATGTGGAAACAGTaGAGTGAGGCCGCGCAGTTG +
Preference number: 2 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPQMWKQ*SEAAQL
Trigger: CAACTGCGCGGCCTCACTTCACTGTTTCCACATTTG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CAA 90 bp GGCTATCTACTGTGTTCAGTTGGACTTCTCCAGAGCTCTGGATGGTaGAGAAGTGTGAGAAAGGAATGTAGACCTTCTCTTCATACAAGT +
Preference number: 2 (lower is better)
Translates to: GYLLCSVGLLQSSGW*RSVRKECRPSLHTS
Trigger: ACTTGTATGAAGAGAAGGTCTACATTCCTTTCTCACACTTCTCAACCATCCAGAGCTCTGGAGAAGTCCAACTGAACACAGTAGATAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATTATCCCGACAGCAGTaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKLSRQQ*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGCTATGGACACAAGTGTaGCACAAAGATGCCCATATT +
Preference number: 2 (lower is better)
Translates to: SWDRKMQLPILVSEAEAELWTQV*HKDAHI
Trigger: AATATGGGCATCTTTGTGTCACACTTGTGTCCATAG...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGATCTGCACTGGCTCCTaGCACCTGCATCTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: IQSNQIRLKYANANVETVICTGS*HLHLSS
Trigger: GGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGAT...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTAC +
Preference number: 2 (lower is better)
Translates to: IQSNQIRLKYANANVETVPDSSE*RRCSGY
Trigger: GTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGCAGAACATGTGCAAATaGCTGTTTATACAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEQNMCK*LFIQAR
Trigger: CCTTGCTTGTATAAACAGTCATTTGCACATGTTCTG...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTGGTTTGTTCTTaGTTTCAAATAGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: SWDRKMQLPILVSEAEAETVVCS*FQIAPD
Trigger: ATCTGGGGCTATTTGAAAGCAAGAACAAACCACTGT...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR GCA 90 bp AAAGGCTACTTCAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTTTATTGCATTGCTTTTaGATATCTCGTGGGACAGAA +
Preference number: 2 (lower is better)
Translates to: KGYFSFLGTRRKQSVGMALLHCF*ISRGTE
Trigger: TTCTGTCCCACGAGATATGCAAAAGCAATGCAATAA...AGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CAA 90 bp AACCATCTGTCCTTAATTACCAATGGTTTCTCCCTACTTTTAACTTaGGTGTGTTTCTCCATGCTGGGAAATCCTAGGAGACACAGACTA +
Preference number: 2 (lower is better)
Translates to: NHLSLITNGFSLLLT*VCFSMLGNPRRHRL
Trigger: TAGTCTGTGTCTCCTAGGATTTCCCAGCATGGAGAAACACACCAAAGTTAAAAGTAGGGAGAAACCATTGGTAATTAAGGACAGATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAAAAGTCGCAACATGCTaGCAAGAACCCTCAAACCAT +
Preference number: 2 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKKVATC*QEPSNH
Trigger: ATGGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTT...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTACAGAACATGTGCAAATaGCTGTTTATACAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVQNMCK*LFIQAR
Trigger: CCTTGCTTGTATAAACAGTCATTTGCACATGTTCTG...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR TCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGAAAGTCGCAACATGCTaGCAAGAACCCTCAAACCAT +
Preference number: 2 (lower is better)
Translates to: IQSNQIRLKYANANVETVKVATC*QEPSNH
Trigger: ATGGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTT...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CCA 72 bp CTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTaGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGG +
Preference number: 3 (lower is better)
Translates to: LLGTSQPPPGSY*GRWPIPAIDPW
Trigger: CCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR GCA 72 bp ACCTCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTaGCATAGATCCCTGGGGCCCTGCTCCATAGAGACG +
Preference number: 3 (lower is better)
Translates to: TSRLLLGALAHS*HRSLGPCSIET
Trigger: CGTCTCTATGGAGCAGGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CCA 72 bp GCCTGGCTAGCTGAGGGCGGGTGGTGTGATCTGCACTaGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGG +
Preference number: 3 (lower is better)
Translates to: AWLAEGGWCDLH*LLPPASQLLAG
Trigger: CCCTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGCTAGCCAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CCA 72 bp GAAAGCAGTCTGTGGGTATGGCTGGTGAAAGGAGGGTaGGTTGGGCATGACACTGGGCAGAGTTCTGGCGGG +
Preference number: 3 (lower is better)
Translates to: ESSLWVWLVKGG*VGHDTGQSSGG
Trigger: CCCGCCAGAACTCTGCCCAGTGTCATGCCCAACCCACCCTCCTTTCACCAGCCATACCCACAGACTGCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp CCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATaGAGACGCTGTTCCGGTTACCTCCAGGTCACGAGA +
Preference number: 3 (lower is better)
Translates to: PPSSEAYPDSSE*RRCSGYLQVTR
Trigger: TCTCGTGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR GCA 72 bp TCTGAGGGGCTGGTGCAGCTGTGGATGTGTGTGGTGTaGAGAACAGAAAGGTGCCCACAGTTCAAGGGTCAC +
Preference number: 3 (lower is better)
Translates to: SEGLVQLWMCVV*RTERCPQFKGH
Trigger: GTGACCCTTGAACTGTGGGCACCTTTCTGTTCTGCACACCACACACATCCACAGCTGCACCAGCCCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp TTCTTTCATCCCTGTGAGATCCTGGTGCTCCCACCCTaGTCTCGATCCCATGCTTCTCTGCCTCCCTGCTTC +
Preference number: 3 (lower is better)
Translates to: FFHPCEILVLPP*SRSHASLPPCF
Trigger: GAAGCAGGGAGGCAGAGAAGCATGGGATCGAGACCAGGGTGGGAGCACCAGGATCTCACAGGGATGAAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTTaGCAGACACAGTGGAGGGGCATCCCAGGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: KLPQLLLHWQIL*QTQWRGIPGPG
Trigger: GCCTGGCCCTGGGATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp AGATGGGTGCATGGTCTGGTAGGTGGATTTCAAGTCTaGGGGGCTGGTGCAGCTGTGGATGTGTGTGGTGTG +
Preference number: 3 (lower is better)
Translates to: RWVHGLVGGFQV*GAGAAVDVCGV
Trigger: CACACCACACACATCCACAGCTGCACCAGCCCCTCAGACTTGAAATCCACCTACCAGACCATGCACCCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CTACTTCTCCATTGGCAAATTCTTTGGCAGACACAGTaGAGGGGCATCCCAGGGCCAGGCAAGGGCCACATT +
Preference number: 3 (lower is better)
Translates to: LLLHWQILWQTQ*RGIPGPGKGHI
Trigger: AATGTGGCCCTTGCCTGGCCCTGGGATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CAGGATACGTTTCCCCAGGGCACCAGCTGTAGAACATaGACCTTATCGAGTGAGAGCCAAGCTCCCCCAACT +
Preference number: 3 (lower is better)
Translates to: QDTFPQGTSCRT*TLSSESQAPPT
Trigger: AGTTGGGGGAGCTTGGCTCTCACTCGATAAGGTCCATGTTCTACAGCTGGTGCCCTGGGGAAACGTATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp TCAAGTCTGAGGGGCTGGTGCAGCTGTGGATGTGTGTaGTGTGCAGAACAGAAAGGTGCCCACAGTTCAAGG +
Preference number: 3 (lower is better)
Translates to: SSLRGWCSCGCV*CAEQKGAHSSR
Trigger: CCTTGAACTGTGGGCACCTTTCTGTTCTGCACACCACACACATCCACAGCTGCACCAGCCCCTCAGACTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AGCAGGGTAAGACAGATGGGTGCATGGTCTGGTAGGTaGATTTCAAGTCTGAGGGGCTGGTGCAGCTGTGGA +
Preference number: 3 (lower is better)
Translates to: SRVRQMGAWSGR*ISSLRGWCSCG
Trigger: TCCACAGCTGCACCAGCCCCTCAGACTTGAAATCCACCTACCAGACCATGCACCCATCTGTCTTACCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CAA 90 bp CTCCCAACTATGGCTGTCTGTGTTTGGGCTAATCATGGGTCAAAGGTGAGTCTAGGGTTCTACAGGCTTTaGTGCAGGGGTGGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: LPTMAVCVWANHGSKVSLGFYRL*CRGGVG
Trigger: CCCCACCCCACCCCTGCACAAAAGCCTGTAGAACCC...TAGACTCACCTTTGACCCATGATTAGCCCAAACACAGACAGCCATAGTTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp GCAGAAGACAGCAGAAGAGCTGGGTGGAACACGTCCTaGCCTCGAAAAGCAAGATTCGGCATGGGCAACCTT +
Preference number: 3 (lower is better)
Translates to: AEDSRRAGWNTS*PRKARFGMGNL
Trigger: AAGGTTGCCCATGCCGAATCTTGCTTTTCGAGGTCAGGACGTGTTCCACCCAGCTCTTCTGCTGTCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp GCTTGGGAAAGCCAGCCACCTCTTCCCACGGGATGCTaGAACATTGGACAAGAATCCACAGAGAAGAGCAGA +
Preference number: 3 (lower is better)
Translates to: AWESQPPLPTGC*NIGQESTEKSR
Trigger: TCTGCTCTTCTCTGTGGATTCTTGTCCAATGTTCCAGCATCCCGTGGGAAGAGGTGGCTGGCTTTCCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp GTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATaGCTGGTGAAAGGAGGGTGGGTTGGGCATGACACT +
Preference number: 3 (lower is better)
Translates to: VSLAQGESSLWV*LVKGGWVGHDT
Trigger: AGTGTCATGCCCAACCCACCCTCCTTTCACCAGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CGAGTGAGAGCCAAGCTCCCCCAACTACTTCTCCATTaGCAAATTCTTTGGCAGACACAGTGGAGGGGCATC +
Preference number: 3 (lower is better)
Translates to: RVRAKLPQLLLH*QILWQTQWRGI
Trigger: GATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCTCTCACTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp TGGTCTGGTAGGTGGATTTCAAGTCTGAGGGGCTGGTaGAGCTGTGGATGTGTGTGGTGTGCAGAACAGAAA +
Preference number: 3 (lower is better)
Translates to: WSGRWISSLRGW*SCGCVWCAEQK
Trigger: TTTCTGTTCTGCACACCACACACATCCACAGCTGCACCAGCCCCTCAGACTTGAAATCCACCTACCAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CCTCATGTATCTGTTTCTTTCATCCCTGTGAGATCCTaGTGCTCCCACCCTGGTCTCGATCCCATGCTTCTC +
Preference number: 3 (lower is better)
Translates to: PHVSVSFIPVRS*CSHPGLDPMLL
Trigger: GAGAAGCATGGGATCGAGACCAGGGTGGGAGCACCAGGATCTCACAGGGATGAAAGAAACAGATACATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AAGAGCTTTCCATACAGTGAGATGACCTGGTGGTGGTaGGGTTTAAGGCTTGACCTTTCCTCACTCCCCACC +
Preference number: 3 (lower is better)
Translates to: KSFPYSEMTWWW*GLRLDLSSLPT
Trigger: GGTGGGGAGTGAGGAAAGGTCAAGCCTTAAACCCCACCACCACCAGGTCATCTCACTGTATGGAAAGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CAGAAGAGCTTTCCATACAGTGAGATGACCTGGTGGTaGTGGGGTTTAAGGCTTGACCTTTCCTCACTCCCC +
Preference number: 3 (lower is better)
Translates to: QKSFPYSEMTWW*WGLRLDLSSLP
Trigger: GGGGAGTGAGGAAAGGTCAAGCCTTAAACCCCACCACCACCAGGTCATCTCACTGTATGGAAAGCTCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CAA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCGCTACTTCAGTTTCCTaGGCACAAGGAGAAAGCAGT +
Preference number: 3 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFATSVS*AQGESS
Trigger: ACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGC...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp AGTGAAAGCCTCATGTATCTGTTTCTTTCATCCCTGTaGGATCCTGGTGCTCCCACCCTGGTCTCGATCCCA +
Preference number: 3 (lower is better)
Translates to: SESLMYLFLSSL*DPGAPTLVSIP
Trigger: TGGGATCGAGACCAGGGTGGGAGCACCAGGATCTCACAGGGATGAAAGAAACAGATACATGAGGCTTTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp ACTGCTCACCAGCTCCCAACTATGGCTGTCTGTGTTTaGGCTAATCATGGGTCAAAGGTGAGTCTATCCCAC +
Preference number: 3 (lower is better)
Translates to: TAHQLPTMAVCV*ANHGSKVSLSH
Trigger: GTGGGATAGACTCACCTTTGACCCATGATTAGCCCAAACACAGACAGCCATAGTTGGGAGCTGGTGAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AGGCACCAGAGGAGGGTAAAAGACACAGTTGGGCCTTaGGTTCCTAGTCAGATTAAGAAGATGGGAACCCCA +
Preference number: 3 (lower is better)
Translates to: RHQRRVKDTVGP*VPSQIKKMGTP
Trigger: TGGGGTTCCCATCTTCTTAATCTGACTAGGAACCCAAGGCCCAACTGTGTCTTTTACCCTCCTCTGGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AAAGCAGACTATGGAGCCGTCAGCCTTTGCCAAGGCTaGCAACAGAGTGACCACACAGAAGAGCTTTCCATA +
Preference number: 3 (lower is better)
Translates to: KADYGAVSLCQG*QQSDHTEELSI
Trigger: TATGGAAAGCTCTTCTGTGTGGTCACTCTGTTGCCAGCCTTGGCAAAGGCTGACGGCTCCATAGTCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp CACGGAGGGAAGTTTTCCTTAGTAACACTGGCAGGCTaGATTTCTGAGAGCAGCAGACATTGCAGCACTCAC +
Preference number: 3 (lower is better)
Translates to: HGGKFSLVTLAG*ISESSRHCSTH
Trigger: GTGAGTGCTGCAATGTCTGCTGCTCTCAGAAATTCAGCCTGCCAGTGTTACTAAGGAAAACTTCCCTCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp ATAATTTCCAAAGCAGACTATGGAGCCGTCAGCCTTTaGCAAGGCTGGCAACAGAGTGACCACACAGAAGAG +
Preference number: 3 (lower is better)
Translates to: IISKADYGAVSL*QGWQQSDHTEE
Trigger: CTCTTCTGTGTGGTCACTCTGTTGCCAGCCTTGGCAAAGGCTGACGGCTCCATAGTCTGCTTTGGAAATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp GTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCCATaGCTCTGGGAACAGGCATGGCACATGACAGGTTTT +
Preference number: 3 (lower is better)
Translates to: VYEWSRGLFIFP*LWEQAWHMTGF
Trigger: AAAACCTGTCATGTGCCATGCCTGTTCCCAGAGGCATGGAAAGATGAACAGGCCTCTAGACCACTCATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp TGTCCCTGTATGAGTGAAAGGCTACTTCAGTTTCCTTaGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTGG +
Preference number: 3 (lower is better)
Translates to: CPCMSERLLQFP*HKEKAVCGYGW
Trigger: CCAGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGCCTTTCACTCATACAGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CCTGTTTCAGAGCTGGGGCTTGTTGAAGAACAGAATTaGTCAGGACACTTAACATCAGCTTCCGTGGGCTTG +
Preference number: 3 (lower is better)
Translates to: PVSELGLVEEQN*SGHLTSASVGL
Trigger: CAAGCCCACGGAAGCTGATGTTAAGTGTCCTGACCAATTCTGTTCTTCAACAAGCCCCAGCTCTGAAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp ACACAGAAGAGCTTTCCATACAGTGAGATGACCTGGTaGTGGTGGGGTTTAAGGCTTGACCTTTCCTCACTC +
Preference number: 3 (lower is better)
Translates to: TQKSFPYSEMTW*WWGLRLDLSSL
Trigger: GAGTGAGGAAAGGTCAAGCCTTAAACCCCACCACCACCAGGTCATCTCACTGTATGGAAAGCTCTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CAA 90 bp AAAGGCTACTTCAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTCTTTCTCTGGTGATATaGAACCCTTGCTCCAGTGGG +
Preference number: 3 (lower is better)
Translates to: KGYFSFLGTRRKQSVGMALSLVI*NPCSSG
Trigger: CCCACTGGAGCAAGGGTTCAATATCACCAGAGAAAG...AGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CAA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAACTTTCTCTGGTGATATaGAACCCTTGCTCCAGTGGG +
Preference number: 3 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQLSLVI*NPCSSG
Trigger: CCCACTGGAGCAAGGGTTCAATATCACCAGAGAAAG...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR TCA 72 bp CACTTGGCCTCTACTCACCAGCCACGTTCTTTCTACTaGTTTCCTGACTGTTCCAGGAATGTGCTGACTTTG +
Preference number: 3 (lower is better)
Translates to: HLASTHQPRSFY*FPDCSRNVLTL
Trigger: CAAAGTCAGCACATTCCTGGAACAGTCAGGAAATCAGTAGAAAGAACGTGGCTGGTGAGTAGAGGCCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp CTTGCTGCTGACACCTGTTTCAGAGCTGGGGCTTGTTaGAGAACAGAATTGGTCAGGACACTTAACATCAGC +
Preference number: 3 (lower is better)
Translates to: LAADTCFRAGAC*RTELVRTLNIS
Trigger: GCTGATGTTAAGTGTCCTGACCAATTCTGTTCTTCAACAAGCCCCAGCTCTGAAACAGGTGTCAGCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp GTGGGCTTAAGAGTGGCAGCATTTCCTCAGTGTAGATaGAGAACACGGGCCCTATTTCTACCTGTGGAAACT +
Preference number: 3 (lower is better)
Translates to: VGLRVAAFPQCR*RTRALFLPVET
Trigger: AGTTTCCACAGGTAGAAATAGGGCCCGTGTTCTTCATCTACACTGAGGAAATGCTGCCACTCTTAAGCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp AGAGCAGCAGACATTGCAGCACTCACTCCAGGGCTCTaGCATCCATTTTTCAAAGACTATTTCTTCCCACAG +
Preference number: 3 (lower is better)
Translates to: RAADIAALTPGL*HPFFKDYFFPQ
Trigger: CTGTGGGAAGAAATAGTCTTTGAAAAATGGATGGCAGAGCCCTGGAGTGAGTGCTGCAATGTCTGCTGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp AATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTaGCAAGAACCCTCAAACCATGAAACCCCGAGCACC +
Preference number: 3 (lower is better)
Translates to: NKETKPQKVATC*QEPSNHETPST
Trigger: GGTGCTCGGGGTTTCATGGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR TCA 72 bp CTTAAATACGCAAATGCAAATGTGGAAACAGTGAAGTaGGGCCGCGCAGTTGTAACCGCTCTTATTCCTCCC +
Preference number: 3 (lower is better)
Translates to: LKYANANVETVK*GRAVVTALIPP
Trigger: GGGAGGAATAAGAGCGGTTACAACTGCGCGGCCTCACTTCACTGTTTCCACATTTGCATTTGCGTATTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR TCA 72 bp GCTTCTCTGCCTCCCTGCTTCAGGAGATGGAAAGGATaGATAGTTTTTACAAGGGCTACAGTTCCATCCAGT +
Preference number: 3 (lower is better)
Translates to: ASLPPCFRRWKG*IVFTRATVPSS
Trigger: ACTGGATGGAACTGTAGCCCTTGTAAAAACTATTCATCCTTTCCATCTCCTGAAGCAGGGAGGCAGAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp GAGACTACTCACAGCACTGAATTGATTTGCAATGCTTaGTCTGTTCAGCTCCATTCTCCAACTCCCTTCCCG +
Preference number: 3 (lower is better)
Translates to: ETTHSTELICNA*SVQLHSPTPFP
Trigger: CGGGAAGGGAGTTGGAGAATGGAGCTGAACAGATCAAGCATTGCAAATCAATTCAGTGCTGTGAGTAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp ATAGTTTTTACAAGGGCTACAGTTCCATCCAGTGACTaGTCACCAGCTCCCAACTATGGCTGTCTGTGTTTG +
Preference number: 3 (lower is better)
Translates to: IVFTRATVPSSD*SPAPNYGCLCL
Trigger: CAAACACAGACAGCCATAGTTGGGAGCTGGTGAGCAGTCACTGGATGGAACTGTAGCCCTTGTAAAAACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp GCAAGAATTGCCTCATTTATGTTGGATCAAGTGGCATaGCACCTATTCTGTAAGCCTTGCCCCATCAAGTGG +
Preference number: 3 (lower is better)
Translates to: ARIASFMLDQVA*HLFCKPCPIKW
Trigger: CCACTTGATGGGGCAAGGCTTACAGAATAGGTGGCATGCCACTTGATCCAACATAAATGAGGCAATTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp TTCTCACATGATCTCCATAAAAGGCTGGTAGGTCACTaGGACTGGAAGATACTCCGTAGGCAAAATCTGAGC +
Preference number: 3 (lower is better)
Translates to: FSHDLHKRLVGH*DWKILRRQNLS
Trigger: GCTCAGATTTTGCCTACGGAGTATCTTCCAGTCCCAGTGACCTACCAGCCTTTTATGGAGATCATGTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp ACGAACAACCTAGGACCAGGCAGAAAGGGATTTAACTaGACTTGTCTGTTACTTGGACTGTGTCATGGACAC +
Preference number: 3 (lower is better)
Translates to: TNNLGPGRKGFN*TCLLLGLCHGH
Trigger: GTGTCCATGACACAGTCCAAGTAACAGACAAGTCCAGTTAAATCCCTTTCTGCCTGGTCCTAGGTTGTTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp ACTTTGGCAAAGGAAGGGCTATCTACTGTGTTCAGTTaGACTTCTCCAGAGCTCTGGATGGTTGAGAAGTGT +
Preference number: 3 (lower is better)
Translates to: TLAKEGLSTVFS*TSPELWMVEKC
Trigger: ACACTTCTCAACCATCCAGAGCTCTGGAGAAGTCCAACTGAACACAGTAGATAGCCCTTCCTTTGCCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CTACAAAGGCTGCATAAATGCTCGGTCAACCACATATaGAAATCCAAGGAGAAAGGCTGTTTCTACACTCCG +
Preference number: 3 (lower is better)
Translates to: LQRLHKCSVNHI*KSKEKGCFYTP
Trigger: CGGAGTGTAGAAACAGCCTTTCTCCTTGGATTTCCATATGTGGTTGACCGAGCATTTATGCAGCCTTTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp CTACTGTGTTCAGTTGGACTTCTCCAGAGCTCTGGATaGTTGAGAAGTGTGAGAAAGGAATGTAGACCTTCT +
Preference number: 3 (lower is better)
Translates to: LLCSVGLLQSSG*LRSVRKECRPS
Trigger: AGAAGGTCTACATTCCTTTCTCACACTTCTCAACCATCCAGAGCTCTGGAGAAGTCCAACTGAACACAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp TCAATCACTCAGGGAGAGAGGGGCCATCCTTCTCCTTaGAGATGTCTGAAAACTGGTATGATAAGGCTAAAA +
Preference number: 3 (lower is better)
Translates to: SITQGERGHPSP*RCLKTGMIRLK
Trigger: TTTTAGCCTTATCATACCAGTTTTCAGACATCTCCAAGGAGAAGGATGGCCCCTCTCTCCCTGAGTGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR-3UTR CAA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGCATATTTCTTCTCTCTaGAACCAGTCCATATGCCCA +
Preference number: 3 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQHISSL*NQSICP
Trigger: TGGGCATATGGACTGGTTCAAGAGAGAAGAAATATG...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR-3UTR CAA 90 bp CCTCTAGTTCTCTTGCTGCTGACACCTGTTTCAGAGCTGGGGCTTGTTGAAGAAAATCTGAGCGAATGGTaGAGTCTTATTTTCCTCAAA +
Preference number: 3 (lower is better)
Translates to: PLVLLLLTPVSELGLVEENLSEW*SLIFLK
Trigger: TTTGAGGAAAATAAGACTCAACCATTCGCTCAGATT...TTCTTCAACAAGCCCCAGCTCTGAAACAGGTGTCAGCAGCAAGAGAACTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp ATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATaGCTGTTTATACAAGCAAGGGGAAAACACCCTTTT +
Preference number: 3 (lower is better)
Translates to: IETARLRQNMCK*LFIQARGKHPF
Trigger: AAAAGGGTGTTTTCCCCTTGCTTGTATAAACAGTCATTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR TCA 72 bp ACTGGTTTTCTTAGACACTGTTCCCTACTGTCCTGGTaGCAGGTAGCATTTGTCATTTTTATCCAGGTAGTC +
Preference number: 3 (lower is better)
Translates to: TGFLRHCSLLSW*QVAFVIFIQVV
Trigger: GACTACCTGGATAAAAATGACAAATGCTACCTGTCACCAGGACAGTAGGGAACAGTGTCTAAGAAAACCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp ATTATCTCTAGAAGCCCTTATGGGTGCTACAAAGGCTaGATAAATGCTCGGTCAACCACATATGGAAATCCA +
Preference number: 3 (lower is better)
Translates to: IISRSPYGCYKG*INARSTTYGNP
Trigger: TGGATTTCCATATGTGGTTGACCGAGCATTTATGCAGCCTTTGTAGCACCCATAAGGGCTTCTAGAGATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp CACCATCTAATTATTATCTCTAGAAGCCCTTATGGGTaGTACAAAGGCTGCATAAATGCTCGGTCAACCACA +
Preference number: 3 (lower is better)
Translates to: HHLIIISRSPYG*YKGCINARSTT
Trigger: TGTGGTTGACCGAGCATTTATGCAGCCTTTGTAGCACCCATAAGGGCTTCTAGAGATAATAATTAGATGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp GCTGGGACTCAGCTTGTAGCTTATATCTTTGATCAATaGGATCTGGCAATGCAGATCAAAGTGTTCAAAGGA +
Preference number: 3 (lower is better)
Translates to: AGTQLVAYIFDQ*DLAMQIKVFKG
Trigger: TCCTTTGAACACTTTGATCTGCATTGCCAGATCCCATTGATCAAAGATATAAGCTACAAGCTGAGTCCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp ACACCAGGAAGACCAGGCTCTTTTTCACATACTATGTaGATCAAACTTCTTAAGACAGTTGGAGGAAAAGGG +
Preference number: 3 (lower is better)
Translates to: TPGRPGSFSHTM*IKLLKTVGGKG
Trigger: CCCTTTTCCTCCAACTGTCTTAAGAAGTTTGATCCACATAGTATGTGAAAAAGAGCCTGGTCTTCCTGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AATTTGCAAGAATTGCCTCATTTATGTTGGATCAAGTaGCATGCCACCTATTCTGTAAGCCTTGCCCCATCA +
Preference number: 3 (lower is better)
Translates to: NLQELPHLCWIK*HATYSVSLAPS
Trigger: TGATGGGGCAAGGCTTACAGAATAGGTGGCATGCCACTTGATCCAACATAAATGAGGCAATTCTTGCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR TCA 72 bp GAAAGATCTCAGTTGAGACTACTCACAGCACTGAATTaGTTTGCAATGCTTGATCTGTTCAGCTCCATTCTC +
Preference number: 3 (lower is better)
Translates to: ERSQLRLLTALN*FAMLDLFSSIL
Trigger: GAGAATGGAGCTGAACAGATCAAGCATTGCAAATCAATTCAGTGCTGTGAGTAGTCTCAACTGAGATCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp TACGCACATACTATGGACACAAGTGTGACACAAAGATaGCCATATTTCTTCTCTCTTGAACCAGTCCATATG +
Preference number: 3 (lower is better)
Translates to: YAHTMDTSVTQR*PYFFSLEPVHM
Trigger: CATATGGACTGGTTCAAGAGAGAAGAAATATGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CCA 72 bp AGCTATAAATGTACTGGGTCATATTCACAGGTGTTCTaGGACACACAGCCACACATTAAACAGGTTGAACAT +
Preference number: 3 (lower is better)
Translates to: SYKCTGSYSQVF*DTQPHIKQVEH
Trigger: ATGTTCAACCTGTTTAATGTGTGGCTGTGTGTCCCAGAACACCTGTGAATATGACCCAGTACATTTATAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AAGGTGCCAAATTTGCAAGAATTGCCTCATTTATGTTaGATCAAGTGGCATGCCACCTATTCTGTAAGCCTT +
Preference number: 3 (lower is better)
Translates to: KVPNLQELPHLC*IKWHATYSVSL
Trigger: AAGGCTTACAGAATAGGTGGCATGCCACTTGATCCAACATAAATGAGGCAATTCTTGCAAATTTGGCACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR GCA 72 bp TCTGAAAACTGGTATGATAAGGCTAAAAACCCTGATTaGCAGAGAGTTTACTCCATACTTGACCTAGATCCT +
Preference number: 3 (lower is better)
Translates to: SENWYDKAKNPD*QRVYSILDLDP
Trigger: AGGATCTAGGTCAAGTATGGAGTAAACTCTCTGGCAATCAGGGTTTTTAGCCTTATCATACCAGTTTTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CCA 72 bp AAGTTGCTTTTACTTAAGGAAATTGGAACAAGTTACTaGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGT +
Preference number: 3 (lower is better)
Translates to: KLLLLKEIGTSY*ADTEQVKPFSG
Trigger: ACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
72% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCCGTTGGGGCTCTGCTaGGCGCCCCCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWPLGLC*APPLRM
Trigger: CATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCCGGGCGGCATCGATaGCTGCCTGCCAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAGRHR*LPARTV
Trigger: CACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCGTTGGGGCTCTGCTaGGCGCCCCCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPLGLC*APPLRM
Trigger: CATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGCAGCTCTCGTCCTCTaGGGCCACAGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWAALVL*GHSPVL
Trigger: CAGGACAGGGCTGTGGCCCCAGAGGACGAGAGCTGC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTGCCAGCACTGCCCATaGGCTTGGCCTGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSCQHCP*AWPAGR
Trigger: CCGCCCGGCAGGCCAAGCTCATGGGCAGTGCTGGCA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGGCGGCATCGATGGCTaGCTGCCAGGACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKGGIDG*LPGQCC
Trigger: GCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCCATGAGCTTGGCCTaGCGGGCGGCATCGATGGCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPMSLA*RAASMA
Trigger: AGCCATCGATGCCGCCCGGCAGGCCAAGCTCATGGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGACCTCGTCATCGCCTaGAGGGGGCACCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPDLVIA*RGHHLV
Trigger: GACCAGGTGGTGCCCCCTGCAGGCGATGACGAGGTC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGAAACCCAGTGGGGGCTaGATTCGACGGAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWKPSGG*IRRRRV
Trigger: GACCCTCCTCCGTCGAATTCAGCCCCCACTGGGTTT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGGCGGCATCGATGGCTaGCTGCCAGGACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGGGIDG*LPGQCC
Trigger: GCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGAAGTTGGTGATGCCGTaGTTGGGCCCATCCCACCCG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWKLVMP*LGPSHP
Trigger: CGGGTGGGATGGGCCCAAGCACGGCATCACCAACTT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
68% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGGGTCTCCCCTTCCGTaGTGTTGCTGGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWGSPLP*CCWAQT
Trigger: AGTCTGAGCCCAGCAACAGCACGGAAGGGGAGACCC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGAGGGGGCTCAAGCCTaGCACTGCCAATGCCTGATG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWEGAQA*HCQCLM
Trigger: CATCAGGCATTGGCAGTGGCAGGCTTGAGCCCCCTC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGCTGGGCTCAGACTCTaGGGCACACTTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWAGLRL*GTLLAW
Trigger: CCAGGCAAGAAGTGTGCCCCAGAGTCTGAGCCCAGC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTGGCATTGGAGCCCGTaGATGAGTAGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWWHWSP*MSSCWG
Trigger: CCCCCAGCAGCTACTCATCCACGGGCTCCAATGCCA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTCTGCCCCGGCTGCCTaGAGTGACAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSSAPAA*SDRGCG
Trigger: CCCACACCCCCTGTCACTCCAGGCAGCCGGGGCAGA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCAGCTCTCGTCCTCTaGGGCCACAGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGAALVL*GHSPVL
Trigger: CAGGACAGGGCTGTGGCCCCAGAGGACGAGAGCTGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTGCCCAGGGGAGACATaGTCTTCGTCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWCPGET*SSSPPG
Trigger: TCCTGGTGGAGACGAAGATCATGTCTCCCCTGGGCA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCTTCACCAGGCGCATaGCCCGGAAGAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGASPGA*PGRGGR
Trigger: TCTTCCGCCTCTTCCGGGTCATGCGCCTGGTGAAGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAAAACCCAGTGGGGGCTaGATTCGACGGAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKKPSGG*IRRRRV
Trigger: GACCCTCCTCCGTCGAATTCAGCCCCCACTGGGTTT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGGCCTCCAGCCCTCCTaGAGATGTCATCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKGLQPS*RCHLRR
Trigger: CCTCCGAAGATGACATCTTCAGGAGGGCTGGAGGCC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCCATGAGCTTGGCCTaGCGGGCGGCATCGATGGCT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPMSLA*RAASMA
Trigger: AGCCATCGATGCCGCCCGGCAGGCCAAGCTCATGGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCCGTGTGGCGGTTGTaGCCCCCTGCTTCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGAVWRL*PPASWV
Trigger: AACCCAAGAAGCAGGGGGGCACAACCGCCACACGGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGAGACAGCAAAGCTGCTaGCACAGGGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWRQQSC*HRGSPL
Trigger: AAGGGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGACCTCGTCATCGCCTaGAGGGGGCACCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSDLVIA*RGHHLV
Trigger: GACCAGGTGGTGCCCCCTGCAGGCGATGACGAGGTC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGCAGGCTGGGCTCACTaGAGTACTCGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWAGWAH*STRLLH
Trigger: GTGAAGAAGCCGAGTACTGCAGTGAGCCCAGCCTGC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCCTCAGACCAGGAGCTaGAGTGGATGGATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWPQTRS*SGWMGS
Trigger: GCTTCCCATCCATCCACTGCAGCTCCTGGTCTGAGG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCGCTTCCACCAGGCTaGTGGCACTGCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPLPPG*WHCHGT
Trigger: AGTTCCATGGCAGTGCCAGCAGCCTGGTGGAAGCGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCTGGGCTCAGACTCTaGGGCACACTTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAGLRL*GTLLAW
Trigger: CCAGGCAAGAAGTGTGCCCCAGAGTCTGAGCCCAGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGTGCGCAAGCCAGCCTaGAGGGACAGTGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWVRKPA*RDSAFL
Trigger: AAGGAATGCACTGTCCCTCCAGGCTGGCTTGCGCAC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCTTGTTGATGTGCAGTaGGCGCTGGGTGGCGAACGT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLVDVQ*ALGGER
Trigger: ACGTTCGCCACCCAGCGCCCACTGCACATCAACAAG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTGGCATTGGAGCCCGTaGATGAGTAGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPWHWSP*MSSCWG
Trigger: CCCCCAGCAGCTACTCATCCACGGGCTCCAATGCCA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCCTCTTGTCCTCCTCTaGGCAGGTCAGTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWPLVLL*AGQLSV
Trigger: CACCGACAACTGACCTGCCCAGAGGAGGACAAGAGG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATCTGCCCCGGCTGCCTaGAGTGACAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLSAPAA*SDRGCG
Trigger: CCCACACCCCCTGTCACTCCAGGCAGCCGGGGCAGA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGCGTCAGCCAGCTCCTaGGTGGTGACCTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPASASS*VVTSMN
Trigger: GTTCATCGAGGTCACCACCCAGGAGCTGGCTGACGC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCAGCTCTCGTCCTCTaGGGCCACAGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSAALVL*GHSPVL
Trigger: CAGGACAGGGCTGTGGCCCCAGAGGACGAGAGCTGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTGCCCAGGGGAGACATaGTCTTCGTCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPCPGET*SSSPPG
Trigger: TCCTGGTGGAGACGAAGATCATGTCTCCCCTGGGCA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCTAGGATATGGTTCCTaGAGGAGGTGTGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLGYGS*RRCAGR
Trigger: CCGTCCAGCACACCTCCTTCAGGAACCATATCCTAG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTGGCCCTCAGGGGTCTaGGGACTCGCAGCACTCGTA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSWPSGV*GLAALV
Trigger: TACGAGTGCTGCGAGTCCTCAGACCCCTGAGGGCCA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTGGCCCTCAGGGGTCTaGGGACTCGCAGCACTCGTA +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRWPSGV*GLAALV
Trigger: TACGAGTGCTGCGAGTCCTCAGACCCCTGAGGGCCA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGCAAGGGTCGGGCCTTaGGGGCATATTCCACACATT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWARVGP*GHIPHI
Trigger: AATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCTTCACCAGGCGCATaGCCCGGAAGAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSASPGA*PGRGGR
Trigger: TCTTCCGCCTCTTCCGGGTCATGCGCCTGGTGAAGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGAAACCCAGTGGGGGCTaGATTCGACGGAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGKPSGG*IRRRRV
Trigger: GACCCTCCTCCGTCGAATTCAGCCCCCACTGGGTTT...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGGCCTCCAGCCCTCCTaGAGATGTCATCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGGLQPS*RCHLRR
Trigger: CCTCCGAAGATGACATCTTCAGGAGGGCTGGAGGCC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKCSLSC*CAVGAG
Trigger: CCCAGCGCCCACTGCACATCAACAAGACAGGGAACA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGGCGGCATCGATGGCTaGCTGCCAGGACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLGGIDG*LPGQCC
Trigger: GCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTGGGTTTCCCATACTaGTGCCGCTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLGFPY*CRFRCV
Trigger: CACACAGCGGAAGCGGCAGCAGTATGGGAAACCCAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGACAAGAAGGGCAATGTaGAGCAGAGGCACCATGGCC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWTRRAM*SRGTMA
Trigger: GGCCATGGTGCCTCTGCTGCACATTGCCCTTCTTGT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCCTTTTCCTTAAGGTaGAGCTCAGACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAFSLR*SSDRGR
Trigger: CCGGCCCCTGTCTGAGCTGCACCTTAAGGAAAAGGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATTCCTGAAGGAGGTGTaGTGGACGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKFLKEV*WTGSSA
Trigger: TGCTGAGGACCCCGTCCAGCACACCTCCTTCAGGAA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTTCCTGAAGGAGGTGTaGTGGACGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPFLKEV*WTGSSA
Trigger: TGCTGAGGACCCCGTCCAGCACACCTCCTTCAGGAA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGACCTCGTCATCGCCTaGAGGGGGCACCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLDLVIA*RGHHLV
Trigger: GACCAGGTGGTGCCCCCTGCAGGCGATGACGAGGTC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATCAGGCCCAATGTCATaGAAGGTGCGCAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSGPMS*KVRKPA
Trigger: GGCTGGCTTGCGCACCTTGCATGACATTGGGCCTGA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGGCATGAGCTGGGCGTaGGCTCCCATAGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGGMSWA*APIVGT
Trigger: GGTTCCAACTATGGGAGCCCACGCCCAGCTCATGCC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGLGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTCCCCTGCAGTGTCTaGGTTGGAGTGGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWFPCSV*VGVGTL
Trigger: AAGAGTCCCCACTCCAACCCAGACACTGCAGGGGAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGGCACACTTCTTGCCTaGCATGCAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWGTLLA*HAGQHD
Trigger: ATCATGCTGGCCTGCATGCCAGGCAAGAAGTGTGCC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTCAGATCCCCAGAGATaGCCCGCCGGATCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRSDPQR*PAGSQA
Trigger: GGCCTGAGATCCGGCGGGCCATCTCTGGGGATCTGA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACTTGTTGATGTGCAGTaGGCGCTGGGTGGCGAACGT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLVDVQ*ALGGER
Trigger: ACGTTCGCCACCCAGCGCCCACTGCACATCAACAAG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGACCAGGAGCTGCAGTaGATGGATGGGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKDQELQ*MDGKLL
Trigger: CAGCAGCTTCCCATCCATCCACTGCAGCTCCTGGTC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACTGCTGGCACTGCCATaGAACTGTCTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLLALP*NCLPGA
Trigger: AGCTCCAGGGAGACAGTTCCATGGCAGTGCCAGCAG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCTGCTGGCACTGCCATaGAACTGTCTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLLALP*NCLPGA
Trigger: AGCTCCAGGGAGACAGTTCCATGGCAGTGCCAGCAG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCACCGTTGGGGCTCTGCTaGGCGCCCCCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAPLGLC*APPLRM
Trigger: CATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGG...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGCAGCTCTCGTCCTCTaGGGCCACAGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLAALVL*GHSPVL
Trigger: CAGGACAGGGCTGTGGCCCCAGAGGACGAGAGCTGC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGAGGGTGGATAAGACGTaGGTGGCTAGAGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGRVDKT*VARGGA
Trigger: GGCTCCCCCTCTAGCCACCCACGTCTTATCCACCCT...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTGCCCAGGGGAGACATaGTCTTCGTCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGCPGET*SSSPPG
Trigger: TCCTGGTGGAGACGAAGATCATGTCTCCCCTGGGCA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCAAGGGTCGGGCCTTaGGGGCATATTCCACACATT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKARVGP*GHIPHI
Trigger: AATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCACTCTGATAGTAGGTaGCATGGTTGCCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWHSDSR*HGCRTG
Trigger: GCCTGTTCGGCAACCATGTCACCTACTATCAGAGTG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCAAGTTGGTGATGCCGTaGTTGGGCCCATCCCACCCG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSKLVMP*LGPSHP
Trigger: CGGGTGGGATGGGCCCAAGCACGGCATCACCAACTT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATTCCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGGAA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTCATCCTCTTCCCCTaGAGTGTCTGGGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWFILFP*SVWVGV
Trigger: CACTCCAACCCAGACACTGCAGGGGAAGAGGATGAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCCTTTTCCTTAAGGTaGAGCTCAGACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGAFSLR*SSDRGR
Trigger: CCGGCCCCTGTCTGAGCTGCACCTTAAGGAAAAGGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCGGGAGTTCTCCTCTaGACTCATAGAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAGVLL*THRGRA
Trigger: TGCTCTCCCTCTATGAGTGCAGAGGAGAACTCCCGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTCAGGCCCAATGTCATaGAAGGTGCGCAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGSGPMS*KVRKPA
Trigger: GGCTGGCTTGCGCACCTTGCATGACATTGGGCCTGA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGAGGGGGCTCAAGCCTaGCACTGCCAATGCCTGATG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSEGAQA*HCQCLM
Trigger: CATCAGGCATTGGCAGTGGCAGGCTTGAGCCCCCTC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGAGGGGGCTCAAGCCTaGCACTGCCAATGCCTGATG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSREGAQA*HCQCLM
Trigger: CATCAGGCATTGGCAGTGGCAGGCTTGAGCCCCCTC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCGCTTCCACCAGGCTaGTGGCACTGCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPLPPG*WHCHGT
Trigger: AGTTCCATGGCAGTGCCAGCAGCCTGGTGGAAGCGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGACTGAGGATGTTGTCTaGGGCGTTCTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWTEDVV*GVLHLL
Trigger: GAGGAGATGGAGAACGCCGCAGACAACATCCTCAGT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGGCATGAGCTGGGCGTaGGCTCCCATAGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSGMSWA*APIVGT
Trigger: GGTTCCAACTATGGGAGCCCACGCCCAGCTCATGCC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATGGAGTTGGTGGCGTTaGAGTCGTCTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKWSWWR*SRLPER
Trigger: CCTTTCCGGAAGACGACTCCAACGCCACCAACTCCA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCCAGGTTGGAGTTGGTaGCGTTGGAGTCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGPGWSW*RWSRLP
Trigger: CGGAAGACGACTCCAACGCCACCAACTCCAACCTGG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCCACTCGTTCCAGGTTaGAGTTGGTGGCGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPPLVPG*SWWRWS
Trigger: ACTCCAACGCCACCAACTCCAACCTGGAACGAGTGG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCACTCGTTCCAGGTTaGAGTTGGTGGCGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPLVPG*SWWRWS
Trigger: ACTCCAACGCCACCAACTCCAACCTGGAACGAGTGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTCCGATGGGCAAGCCTaGCTCCACAGTTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPSDGQA*LHSFLP
Trigger: AGGGAGAAAACTGTGGAGCCAGGCTTGCCCATCGGA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATCCGATGGGCAAGCCTaGCTCCACAGTTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSDGQA*LHSFLP
Trigger: AGGGAGAAAACTGTGGAGCCAGGCTTGCCCATCGGA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGTTTCTTTTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWVSFLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAAAAGAAAC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATTCCCCTGCAGTGTCTaGGTTGGAGTGGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKFPCSV*VGVGTL
Trigger: AAGAGTCCCCACTCCAACCCAGACACTGCAGGGGAA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTCATTGACAATACGGTaGCACTGCAGGCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWSLTIR*HCRRNL
Trigger: CAGGTTCCGCCTGCAGTGCCACCGTATTGTCAATGA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGGCACACTTCTTGCCTaGCATGCAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKGTLLA*HAGQHD
Trigger: ATCATGCTGGCCTGCATGCCAGGCAAGAAGTGTGCC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGCTGGGCTCAGACTCTaGGGCACACTTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRAGLRL*GTLLAW
Trigger: CCAGGCAAGAAGTGTGCCCCAGAGTCTGAGCCCAGC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTCAGAGGCATGTTCATaGACACCAGGCGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWSEACS*TPGVCR
Trigger: CCTGCAAACGCCTGGTGTCCATGAACATGCCTCTGA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATCAGATCCCCAGAGATaGCCCGCCGGATCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLSDPQR*PAGSQA
Trigger: GGCCTGAGATCCGGCGGGCCATCTCTGGGGATCTGA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTGGCATTGGAGCCCGTaGATGAGTAGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSWHWSP*MSSCWG
Trigger: CCCCCAGCAGCTACTCATCCACGGGCTCCAATGCCA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCCTCTTGTCCTCCTCTaGGCAGGTCAGTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGPLVLL*AGQLSV
Trigger: CACCGACAACTGACCTGCCCAGAGGAGGACAAGAGG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGAATGTGGTAGGAGAATaGCTTCTCTGCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWNVVGE*LLCRRG
Trigger: CCCCCTCCTGCAGAGAAGCCATTCTCCTACCACATT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGACCAGGAGCTGCAGTaGATGGATGGGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGDQELQ*MDGKLL
Trigger: CAGCAGCTTCCCATCCATCCACTGCAGCTCCTGGTC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTGCCAGCACTGCCCATaGGCTTGGCCTGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVCQHCP*AWPAGR
Trigger: CCGCCCGGCAGGCCAAGCTCATGGGCAGTGCTGGCA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTGCGCCAGTAGCGGCTaGATTTGGATTTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPCASSG*IWIWRS
Trigger: GGATCTCCAAATCCAAATTCAGCCGCTACTGGCGCA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATGCGCCAGTAGCGGCTaGATTTGGATTTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKCASSG*IWIWRS
Trigger: GGATCTCCAAATCCAAATTCAGCCGCTACTGGCGCA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATGTCTTGCACTTCTGTaGGCCAGTGAGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKCLALL*ASEAGC
Trigger: ACAACCAGCCTCACTGGCTCACAGAAGTGCAAGACA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGGAGCATTTCTGCAGTaGAAAGGGCCAGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGGAFLQ*KGPGGL
Trigger: AAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGGATCTGAAACACAGTaGGGAGAGACTGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKGSETQ*GETAGS
Trigger: ACTTCCCGCAGTCTCTCCTCACTGTGTTTCAGATCC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGACTGCAGCAGAGTGGTaGCAATTACGATGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWTAAEW*QLRCSR
Trigger: TCGGGAACATCGTAATTGTCACCACTCTGCTGCAGT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCAAGGGTCGGGCCTTaGGGGCATATTCCACACATT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGARVGP*GHIPHI
Trigger: AATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCTTCACCAGGCGCATaGCCCGGAAGAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAASPGA*PGRGGR
Trigger: TCTTCCGCCTCTTCCGGGTCATGCGCCTGGTGAAGC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTGAATTCATCCAGGTaGTGGGGACCGAGGATAGAC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLNSSR*WGPRID
Trigger: GTCTATCCTCGGTCCCCATCACCTGGATGAATTCAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCAGTGCATTCCTTTGTaGGGGCTTGCCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLQCIPL*GLAHQP
Trigger: GGGCTGGTGGGCAAGCCCTCACAAAGGAATGCACTG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRCSLSC*CAVGAG
Trigger: CCCAGCGCCCACTGCACATCAACAAGACAGGGAACA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCTGTCCCAGTCCTTCTaGAATCAAGACCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLSQSF*NQDRFH
Trigger: GTGGAAGCGGTCTTGATTTCAGAAGGACTGGGACAG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAACAGAATATGGTTCCTaGAGGAGGTGTGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKTEYGS*RRCAGR
Trigger: CCGTCCAGCACACCTCCTTCAGGAACCATATTCTGT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCTCGGGAGCAAGTCCTaGAGCTGCATTGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLGSKS*SCIGIH
Trigger: ATGAATGCCAATGCAGCTGCAGGACTTGCTCCCGAG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACTCGGGAGCAAGTCCTaGAGCTGCATTGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLGSKS*SCIGIH
Trigger: ATGAATGCCAATGCAGCTGCAGGACTTGCTCCCGAG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCCGTGTGGCGGTTGTaGCCCCCTGCTTCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLAVWRL*PPASWV
Trigger: AACCCAAGAAGCAGGGGGGCACAACCGCCACACGGC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAAAGTTGGTGATGCCGTaGTTGGGCCCATCCCACCCG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLKLVMP*LGPSHP
Trigger: CGGGTGGGATGGGCCCAAGCACGGCATCACCAACTT...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTTCCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGGAA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGGAAGTTATCGAACGTaGTCCTACGGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWGSYRT*SYGSAS
Trigger: AGATGCAGACCCGTAGGAGCACGTTCGATAACTTCC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGACAGTGAGGAGAGACTaGGGGAAGTTATCGAACGTG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWTVRRD*GKLSNV
Trigger: CACGTTCGATAACTTCCCGCAGTCTCTCCTCACTGT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCAATTTTCTCCTCTTTaGTCTCCTCCACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWQFSPL*SPPRLA
Trigger: AGCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTCCGGCATGGGAACTaGCTTTTCCTTAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWFRHGN*LFLKVQ
Trigger: CTGCACCTTAAGGAAAAGGCAGTTCCCATGCCGGAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTTCCTGAAGGAGGTGTaGTGGACGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSFLKEV*WTGSSA
Trigger: TGCTGAGGACCCCGTCCAGCACACCTCCTTCAGGAA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCACCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGGGTCTCCCCTTCCGTaGTGTTGCTGGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLGSPLP*CCWAQT
Trigger: AGTCTGAGCCCAGCAACAGCACGGAAGGGGAGACCC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCAGACAGCAAAGCTGCTaGCACAGGGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSRQQSC*HRGSPL
Trigger: AAGGGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCAGAAGACAGCAAAGCTaGTGCCACAGGGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSRRQQS*CHRGSP
Trigger: GGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCTTCT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTGCCCACCAGCCCCTaGTCTTTTCGCTTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLPTSP*SFRFLN
Trigger: ATTCAAGAAGCGAAAAGAGCAGGGGCTGGTGGGCAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTCCTTTGTGAGGGCTTaGCCACCAGCCCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRSFVRA*PPAPAL
Trigger: AAGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTCCTTTGTGAGGGCTTaGCCACCAGCCCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSSFVRA*PPAPAL
Trigger: AAGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCAATGTCATGCAAGGTaGGCAAGCCAGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSQCHAR*ASQPGG
Trigger: CCCTCCAGGCTGGCTTGCGCACCTTGCATGACATTG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGAGGAAAGTTGCCCCTaGTGTCACTCTGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWEESCP*CHSDSR
Trigger: CCTACTATCAGAGTGACAGCAGGGGCAACTTTCCTC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCAGGCTGGGCTCACTaGAGTACTCGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSAGWAH*STRLLH
Trigger: GTGAAGAAGCCGAGTACTGCAGTGAGCCCAGCCTGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCTCAAGCCTGCCACTaGCAATGCCTGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAQACH*QCLMMN
Trigger: GTTCATCATCAGGCATTGGCAGTGGCAGGCTTGAGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGGCATGAGCTGGGCGTaGGCTCCCATAGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLGMSWA*APIVGT
Trigger: GGTTCCAACTATGGGAGCCCACGCCCAGCTCATGCC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGCCGGGCGGCATCGATaGCTGCCTGCCAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKAGRHR*LPARTV
Trigger: CACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGCAGCAGGGAGGCAATaGAGCGCACTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRAAGRQ*SALSSA
Trigger: TGCTGAACTCAGTGCGCTCCATTGCCTCCCTGCTGC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCAGCAGGGAGGCAATaGAGCGCACTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSAAGRQ*SALSSA
Trigger: TGCTGAACTCAGTGCGCTCCATTGCCTCCCTGCTGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGTTTCTTTTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKVSFLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAAAAGAAAC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGTTTCTTTTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPVSFLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAAAAGAAAC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGTGTCTGGGTTGGAGTaGGGACTCTTATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWVSGLE*GLLSSF
Trigger: AAACGAGGATAAGAGTCCCCACTCCAACCCAGACAC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCTGCAGTGTCTGGGTTaGAGTGGGGACTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLQCLG*SGDSYP
Trigger: AGGATAAGAGTCCCCACTCCAACCCAGACACTGCAG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTTCCCCTGCAGTGTCTaGGTTGGAGTGGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGFPCSV*VGVGTL
Trigger: AAGAGTCCCCACTCCAACCCAGACACTGCAGGGGAA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTTGATCGCGCTGGACTaGATGCCAAAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLIALD*MPKEMR
Trigger: CCTCATCTCCTTTGGCATCCAGTCCAGCGCGATCAA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCCTTGTCTTCTGTGTaGGAGTCAATGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPLSSV*ESMERY
Trigger: GTACCGCTCCATTGACTCCCACACAGAAGACAAGGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCACGGTAGTTGTAGATaGGGCCCTTGTCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWHGSCR*GPCLLC
Trigger: ACACAGAAGACAAGGGCCCCATCTACAACTACCGTG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGGCACACTTCTTGCCTaGCATGCAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGGTLLA*HAGQHD
Trigger: ATCATGCTGGCCTGCATGCCAGGCAAGAAGTGTGCC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGTGCGCAAGCCAGCCTaGAGGGACAGTGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSVRKPA*RDSAFL
Trigger: AAGGAATGCACTGTCCCTCCAGGCTGGCTTGCGCAC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTCAGATCCCCAGAGATaGCCCGCCGGATCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLSDPQR*PAGSQA
Trigger: GGCCTGAGATCCGGCGGGCCATCTCTGGGGATCTGA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCTTGTTGATGTGCAGTaGGCGCTGGGTGGCGAACGT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLVDVQ*ALGGER
Trigger: ACGTTCGCCACCCAGCGCCCACTGCACATCAACAAG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTCTGCCCCGGCTGCCTaGAGTGACAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPSAPAA*SDRGCG
Trigger: CCCACACCCCCTGTCACTCCAGGCAGCCGGGGCAGA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCTGCTGGCACTGCCATaGAACTGTCTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLLALP*NCLPGA
Trigger: AGCTCCAGGGAGACAGTTCCATGGCAGTGCCAGCAG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGCGTCAGCCAGCTCCTaGGTGGTGACCTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLASASS*VVTSMN
Trigger: GTTCATCGAGGTCACCACCCAGGAGCTGGCTGACGC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCCGTTGGGGCTCTGCTaGGCGCCCCCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPPLGLC*APPLRM
Trigger: CATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCTCTGGAAATCAGGGTaGATAAGACGTGGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLWKSG*IRRGWL
Trigger: TAGCCACCCACGTCTTATCCACCCTGATTTCCAGAG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGGTGGCCACATGCAATaGGAGCTGGGCTGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQGGHMQ*ELGWVP
Trigger: GGGAACCCAGCCCAGCTCCCATTGCATGTGGCCACC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGGAGAGTGGCTGGTATaGGGGTGTGGATGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRGEWLV*GCGWLN
Trigger: GTTCAGCCATCCACACCCCCATACCAGCCACTCTCC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGGAGCATTTCTGCAGTaGAAAGGGCCAGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSGAFLQ*KGPGGL
Trigger: AAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGGAGCATTTCTGCAGTaGAAAGGGCCAGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRGAFLQ*KGPGGL
Trigger: AAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTGCCCAGGGGAGACATaGTCTTCGTCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLCPGET*SSSPPG
Trigger: TCCTGGTGGAGACGAAGATCATGTCTCCCCTGGGCA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCACTGCAGCAGAGTGGTaGCAATTACGATGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPTAAEW*QLRCSR
Trigger: TCGGGAACATCGTAATTGTCACCACTCTGCTGCAGT...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAACTGCAGCAGAGTGGTaGCAATTACGATGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKTAAEW*QLRCSR
Trigger: TCGGGAACATCGTAATTGTCACCACTCTGCTGCAGT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTATAGAGCTTTCCCTTaGAGAGCTGGACCCCAATGC +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPYRAFP*RAGPQC
Trigger: GCATTGGGGTCCAGCTCTTCAAGGGAAAGCTCTATA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTTGAATTCATCCAGGTaGTGGGGACCGAGGATAGAC +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLNSSR*WGPRID
Trigger: GTCTATCCTCGGTCCCCATCACCTGGATGAATTCAA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATTGCAGGCCACACGGTaGGGACACAATTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLQATR*GHNFPK
Trigger: TTTTGGGAAATTGTGTCCTCACCGTGTGGCCTGCAA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTTGCAGGCCACACGGTaGGGACACAATTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLQATR*GHNFPK
Trigger: TTTTGGGAAATTGTGTCCTCACCGTGTGGCCTGCAA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCAGTGCATTCCTTTGTaGGGGCTTGCCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLQCIPL*GLAHQP
Trigger: GGGCTGGTGGGCAAGCCCTCACAAAGGAATGCACTG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCCTCCAGCCCTCCTaGAGATGTCATCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAGLQPS*RCHLRR
Trigger: CCTCCGAAGATGACATCTTCAGGAGGGCTGGAGGCC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLCSLSC*CAVGAG
Trigger: CCCAGCGCCCACTGCACATCAACAAGACAGGGAACA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCTTCTCATGGGACGGTaGCTCAGTGTCAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGLLMGR*LSVSLV
Trigger: AACCAAGCTGACACTGAGTCACCGTCCCATGAGAAG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCTGTCCCAGTCCTTCTaGAATCAAGACCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGLSQSF*NQDRFH
Trigger: GTGGAAGCGGTCTTGATTTCAGAAGGACTGGGACAG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWMNLGS*ANCPSP
Trigger: AGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCAT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTGCCTGCCAGGACAGTaGTGCCCCTGGAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLCLPGQ*CPWSRD
Trigger: ATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGACAAGAAGGGCAATGTaGAGCAGAGGCACCATGGCC +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRTRRAM*SRGTMA
Trigger: GGCCATGGTGCCTCTGCTGCACATTGCCCTTCTTGT...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCACAAGAAGGGCAATGTaGAGCAGAGGCACCATGGCC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSTRRAM*SRGTMA
Trigger: GGCCATGGTGCCTCTGCTGCACATTGCCCTTCTTGT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCGGAACATCTATTATaGCCTCCTGGTTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPEHLL*PPGCSR
Trigger: CCTGCTACAACCAGGAGGGCATAATAGATGTTCCGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAAAGTTGGTGATGCCGTaGTTGGGCCCATCCCACCCG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAKLVMP*LGPSHP
Trigger: CGGGTGGGATGGGCCCAAGCACGGCATCACCAACTT...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGAGGATGCCACAAGGTTaGTCAAGGAATTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWRMPQG*SRNSST
Trigger: GGTACTGGAATTCCTTGAGCAACCTTGTGGCATCCT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTTCCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGGAA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTTCCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGGAA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGGAAGTTATCGAACGTaGTCCTACGGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKGSYRT*SYGSAS
Trigger: AGATGCAGACCCGTAGGAGCACGTTCGATAACTTCC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAACAGTGAGGAGAGACTaGGGGAAGTTATCGAACGTG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKTVRRD*GKLSNV
Trigger: CACGTTCGATAACTTCCCGCAGTCTCTCCTCACTGT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGCCTTTTCCTTAAGGTaGAGCTCAGACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLAFSLR*SSDRGR
Trigger: CCGGCCCCTGTCTGAGCTGCACCTTAAGGAAAAGGC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCTGAAGATGAAAAATaGACTGGCTTCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAEDEK*TGFRHG
Trigger: CCCATGCCGGAAGCCAGTGCATTTTTCATCTTCAGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATTCCTGAAGGAGGTGTaGTGGACGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLFLKEV*WTGSSA
Trigger: TGCTGAGGACCCCGTCCAGCACACCTCCTTCAGGAA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTTCCTGAAGGAGGTGTaGTGGACGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLFLKEV*WTGSSA
Trigger: TGCTGAGGACCCCGTCCAGCACACCTCCTTCAGGAA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATACTCTTGTTCCCCCTaGTCCTGGAAGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKYSCSP*SWKVTM
Trigger: CATTGTCACCTTCCAGGAGCAGGGGGAACAAGAGTA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTACTCTTGTTCCCCCTaGTCCTGGAAGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPYSCSP*SWKVTM
Trigger: CATTGTCACCTTCCAGGAGCAGGGGGAACAAGAGTA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCGGGAGTTCTCCTCTaGACTCATAGAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSAGVLL*THRGRA
Trigger: TGCTCTCCCTCTATGAGTGCAGAGGAGAACTCCCGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGGGTCTCCCCTTCCGTaGTGTTGCTGGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLGSPLP*CCWAQT
Trigger: AGTCTGAGCCCAGCAACAGCACGGAAGGGGAGACCC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCAGAAGACAGCAAAGCTaGTGCCACAGGGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLRRQQS*CHRGSP
Trigger: GGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCTTCT...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATCCTTTGTGAGGGCTTaGCCACCAGCCCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLSFVRA*PPAPAL
Trigger: AAGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCAATGTCATGCAAGGTaGGCAAGCCAGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLQCHAR*ASQPGG
Trigger: CCCTCCAGGCTGGCTTGCGCACCTTGCATGACATTG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGAGGAAAGTTGCCCCTaGTGTCACTCTGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKEESCP*CHSDSR
Trigger: CCTACTATCAGAGTGACAGCAGGGGCAACTTTCCTC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGAGGAAAGTTGCCCCTaGTGTCACTCTGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPEESCP*CHSDSR
Trigger: CCTACTATCAGAGTGACAGCAGGGGCAACTTTCCTC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCACCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGAGGGGGCTCAAGCCTaGCACTGCCAATGCCTGATG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLEGAQA*HCQCLM
Trigger: CATCAGGCATTGGCAGTGGCAGGCTTGAGCCCCCTC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACCTCAGACCAGGAGCTaGAGTGGATGGATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLPQTRS*SGWMGS
Trigger: GCTTCCCATCCATCCACTGCAGCTCCTGGTCTGAGG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCCGCTTCCACCAGGCTaGTGGCACTGCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLPLPPG*WHCHGT
Trigger: AGTTCCATGGCAGTGCCAGCAGCCTGGTGGAAGCGG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCATTGGCATTCATGTTaGCATGAGCTGGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRHWHSC*HELGVG
Trigger: GCCCACGCCCAGCTCATGCCAACATGAATGCCAATG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGTCCTGCAGCTGCATTaGCATTCATGTTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPVLQLH*HSCWHE
Trigger: CTCATGCCAACATGAATGCCAATGCAGCTGCAGGAC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTGGAGTTGGTGGCGTTaGAGTCGTCTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSWSWWR*SRLPER
Trigger: CCTTTCCGGAAGACGACTCCAACGCCACCAACTCCA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTCCGATGGGCAAGCCTaGCTCCACAGTTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSSDGQA*LHSFLP
Trigger: AGGGAGAAAACTGTGGAGCCAGGCTTGCCCATCGGA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGCAGCAGGGAGGCAATaGAGCGCACTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLAAGRQ*SALSSA
Trigger: TGCTGAACTCAGTGCGCTCCATTGCCTCCCTGCTGC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTCTTCCTCCTCCTTTTaGGCTGAGGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSSSSSF*AEVRLS
Trigger: GGAGAGCCTGACCTCAGCCCAAAAGGAGGAGGAAGA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLLGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCACTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLALGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTATCCTCGTTTTCACTaGGCTGGAGGTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWYPRFH*AGGHPC
Trigger: ACATGGATGACCTCCAGCCCAGTGAAAACGAGGATA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGTGTCTGGGTTGGAGTaGGGACTCTTATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPVSGLE*GLLSSF
Trigger: AAACGAGGATAAGAGTCCCCACTCCAACCCAGACAC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTTCCCCTGCAGTGTCTaGGTTGGAGTGGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSFPCSV*VGVGTL
Trigger: AAGAGTCCCCACTCCAACCCAGACACTGCAGGGGAA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTTCCCCTGCAGTGTCTaGGTTGGAGTGGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRFPCSV*VGVGTL
Trigger: AAGAGTCCCCACTCCAACCCAGACACTGCAGGGGAA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTCATTGACAATACGGTaGCACTGCAGGCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGSLTIR*HCRRNL
Trigger: CAGGTTCCGCCTGCAGTGCCACCGTATTGTCAATGA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLCGSQ*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATTGACTCCCACACAG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLCGSQ*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATTGACTCCCACACAG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCCCTTGTCTTCTGTGTaGGAGTCAATGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGPLSSV*ESMERY
Trigger: GTACCGCTCCATTGACTCCCACACAGAAGACAAGGG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACACGGTAGTTGTAGATaGGGCCCTTGTCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKHGSCR*GPCLLC
Trigger: ACACAGAAGACAAGGGCCCCATCTACAACTACCGTG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTCCACACATTGTCTCTaGTTCTTGTCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWSTHCL*FLSSSQ
Trigger: CTGTGAGCTGGACAAGAACCAGAGACAATGTGTGGA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGGCACACTTCTTGCCTaGCATGCAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSGTLLA*HAGQHD
Trigger: ATCATGCTGGCCTGCATGCCAGGCAAGAAGTGTGCC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCTGGGCTCAGACTCTaGGGCACACTTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQAGLRL*GTLLAW
Trigger: CCAGGCAAGAAGTGTGCCCCAGAGTCTGAGCCCAGC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCTGGGCTCAGACTCTaGGGCACACTTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLAGLRL*GTLLAW
Trigger: CCAGGCAAGAAGTGTGCCCCAGAGTCTGAGCCCAGC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTTTCCCAAAACCCAGTaGGGGCTGAATTCGACGGAG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGFPKTQ*GLNSTE
Trigger: CTCCGTCGAATTCAGCCCCCACTGGGTTTTGGGAAA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGTGCGCAAGCCAGCCTaGAGGGACAGTGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLVRKPA*RDSAFL
Trigger: AAGGAATGCACTGTCCCTCCAGGCTGGCTTGCGCAC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGTGCGCAAGCCAGCCTaGAGGGACAGTGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLVRKPA*RDSAFL
Trigger: AAGGAATGCACTGTCCCTCCAGGCTGGCTTGCGCAC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTCCACCAGCTTCTCATaGGACGGTGACTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGSTSFS*DGDSVS
Trigger: TGACACTGAGTCACCGTCCCATGAGAAGCTGGTGGA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATGGCATTGGAGCCCGTaGATGAGTAGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAWHWSP*MSSCWG
Trigger: CCCCCAGCAGCTACTCATCCACGGGCTCCAATGCCA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTGGCATTGGAGCCCGTaGATGAGTAGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLWHWSP*MSSCWG
Trigger: CCCCCAGCAGCTACTCATCCACGGGCTCCAATGCCA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTCTGCCCCGGCTGCCTaGAGTGACAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSAPAA*SDRGCG
Trigger: CCCACACCCCCTGTCACTCCAGGCAGCCGGGGCAGA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCTGCAGTGGATGGATaGGAAGCTGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAAVDG*EAAVEF
Trigger: AAACTCAACAGCAGCTTCCCATCCATCCACTGCAGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGCTGCAGTGGATGGATaGGAAGCTGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPAAVDG*EAAVEF
Trigger: AAACTCAACAGCAGCTTCCCATCCATCCACTGCAGC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGACCAGGAGCTGCAGTaGATGGATGGGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLDQELQ*MDGKLL
Trigger: CAGCAGCTTCCCATCCATCCACTGCAGCTCCTGGTC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGACCAGGAGCTGCAGTaGATGGATGGGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLDQELQ*MDGKLL
Trigger: CAGCAGCTTCCCATCCATCCACTGCAGCTCCTGGTC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCGTCAGCCAGCTCCTaGGTGGTGACCTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLASASS*VVTSMN
Trigger: GTTCATCGAGGTCACCACCCAGGAGCTGGCTGACGC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCAATGGGAGCTGGGCTaGGTTCCCAGGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLQWELG*VPRALE
Trigger: TTCCAGAGCCCTGGGAACCCAGCCCAGCTCCCATTG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCCACGTTTTCAGTGTTaGCAGACTCAGTCTCACTTG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPPRFQC*QTQSHL
Trigger: CAAGTGAGACTGAGTCTGTCAACACTGAAAACGTGG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTGCGCCAGTAGCGGCTaGATTTGGATTTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSCASSG*IWIWRS
Trigger: GGATCTCCAAATCCAAATTCAGCCGCTACTGGCGCA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTGCCCAGGGGAGACATaGTCTTCGTCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLCPGET*SSSPPG
Trigger: TCCTGGTGGAGACGAAGATCATGTCTCCCCTGGGCA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGGATCTGAAACACAGTaGGGAGAGACTGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSGSETQ*GETAGS
Trigger: ACTTCCCGCAGTCTCTCCTCACTGTGTTTCAGATCC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTCCCCGGTCAGGATCTaGAACACAGTGAGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLSPVRI*NTVRRD
Trigger: GTCTCTCCTCACTGTGTTTCAGATCCTGACCGGGGA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTAGGATATGGTTCCTaGAGGAGGTGTGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLLGYGS*RRCAGR
Trigger: CCGTCCAGCACACCTCCTTCAGGAACCATATCCTAG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATATTCATGGCGATTTTaGAGAGGCAGCTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKYSWRF*RGSSGH
Trigger: ATGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGCTTCACCAGGCGCATaGCCCGGAAGAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPASPGA*PGRGGR
Trigger: TCTTCCGCCTCTTCCGGGTCATGCGCCTGGTGAAGC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCACTCTGATAGTAGGTaGCATGGTTGCCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSHSDSR*HGCRTG
Trigger: GCCTGTTCGGCAACCATGTCACCTACTATCAGAGTG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLCSLSC*CAVGAG
Trigger: CCCAGCGCCCACTGCACATCAACAAGACAGGGAACA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKMNLGS*ANCPSP
Trigger: AGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCAT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPMNLGS*ANCPSP
Trigger: AGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCAT...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGGCGGCATCGATGGCTaGCTGCCAGGACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVGGIDG*LPGQCC
Trigger: GCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTTGGGTTTCCCATACTaGTGCCGCTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLLGFPY*CRFRCV
Trigger: CACACAGCGGAAGCGGCAGCAGTATGGGAAACCCAA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATTGGGTTTCCCATACTaGTGCCGCTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLLGFPY*CRFRCV
Trigger: CACACAGCGGAAGCGGCAGCAGTATGGGAAACCCAA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGCCGTGTGGCGGTTGTaGCCCCCTGCTTCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPAVWRL*PPASWV
Trigger: AACCCAAGAAGCAGGGGGGCACAACCGCCACACGGC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGGGGTCAATGTCTTCTaGCTGGGTGATCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLGVNVF*LGDPVQ
Trigger: CTGGACTGGATCACCCAGGCAGAAGACATTGACCCC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATCTCACTTGTGGGCATaGTCATGTTTCGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSHLWA*SCFEAC
Trigger: ACAAGCCTCGAAACATGAGCATGCCCACAAGTGAGA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCCTTTTCCTTAAGGTaGAGCTCAGACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLAFSLR*SSDRGR
Trigger: CCGGCCCCTGTCTGAGCTGCACCTTAAGGAAAAGGC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTGTCAAAGTCAAACTTaGTGTTCTCCCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWCQSQT*CSPSFE
Trigger: CTCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTACTCTTGTTCCCCCTaGTCCTGGAAGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGYSCSP*SWKVTM
Trigger: CATTGTCACCTTCCAGGAGCAGGGGGAACAAGAGTA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGCGGGAGTTCTCCTCTaGACTCATAGAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLAGVLL*THRGRA
Trigger: TGCTCTCCCTCTATGAGTGCAGAGGAGAACTCCCGC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTAGACAGCAAAGCTGCTaGCACAGGGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLRQQSC*HRGSPL
Trigger: AAGGGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCT...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGAGAAGACAGCAAAGCTaGTGCCACAGGGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQRRQQS*CHRGSP
Trigger: GGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCTTCT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATCCTTTGTGAGGGCTTaGCCACCAGCCCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLASFVRA*PPAPAL
Trigger: AAGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTCCTTTGTGAGGGCTTaGCCACCAGCCCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLSFVRA*PPAPAL
Trigger: AAGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCAATGTCATGCAAGGTaGGCAAGCCAGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLQCHAR*ASQPGG
Trigger: CCCTCCAGGCTGGCTTGCGCACCTTGCATGACATTG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCAGGCTGGGCTCACTaGAGTACTCGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQAGWAH*STRLLH
Trigger: GTGAAGAAGCCGAGTACTGCAGTGAGCCCAGCCTGC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCAGGCTGGGCTCACTaGAGTACTCGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAAGWAH*STRLLH
Trigger: GTGAAGAAGCCGAGTACTGCAGTGAGCCCAGCCTGC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCCTCAGACCAGGAGCTaGAGTGGATGGATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLPQTRS*SGWMGS
Trigger: GCTTCCCATCCATCCACTGCAGCTCCTGGTCTGAGG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCACTGAGGATGTTGTCTaGGGCGTTCTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSTEDVV*GVLHLL
Trigger: GAGGAGATGGAGAACGCCGCAGACAACATCCTCAGT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGCCGGGCGGCATCGATaGCTGCCTGCCAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVAGRHR*LPARTV
Trigger: CACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATGGAGTTGGTGGCGTTaGAGTCGTCTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLWSWWR*SRLPER
Trigger: CCTTTCCGGAAGACGACTCCAACGCCACCAACTCCA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCCAGGTTGGAGTTGGTaGCGTTGGAGTCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQPGWSW*RWSRLP
Trigger: CGGAAGACGACTCCAACGCCACCAACTCCAACCTGG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGTTCCAGGTTGGAGTTaGTGGCGTTGGAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSVPGWS*WRWSRL
Trigger: AAGACGACTCCAACGCCACCAACTCCAACCTGGAAC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCTTTCTCCCTCTCTTTaGAAAACTCCCCGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLSPSL*KTPRSK
Trigger: TTTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTTCTCTCGAAGCTTCTaGAAATCTCCTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPFSRSF*KSPRAL
Trigger: CAAAGCCCGAGGAGATTTCCAGAAGCTTCGAGAGAA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAACTCAGTCTCACTTGTaGGCATGCTCATGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKTQSHL*ACSCFE
Trigger: CTCGAAACATGAGCATGCCCACAAGTGAGACTGAGT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCAGCAGGGAGGCAATaGAGCGCACTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQAAGRQ*SALSSA
Trigger: TGCTGAACTCAGTGCGCTCCATTGCCTCCCTGCTGC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCAGCAGGGAGGCAATaGAGCGCACTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAAAGRQ*SALSSA
Trigger: TGCTGAACTCAGTGCGCTCCATTGCCTCCCTGCTGC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTCTTCCTCCTCCTTTTaGGCTGAGGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLSSSSF*AEVRLS
Trigger: GGAGAGCCTGACCTCAGCCCAAAAGGAGGAGGAAGA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGTTTCTTTTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSVSFLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAAAAGAAAC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTGCAGTGTCTGGGTTaGAGTGGGGACTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLQCLG*SGDSYP
Trigger: AGGATAAGAGTCCCCACTCCAACCCAGACACTGCAG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATTCCCCTGCAGTGTCTaGGTTGGAGTGGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLFPCSV*VGVGTL
Trigger: AAGAGTCCCCACTCCAACCCAGACACTGCAGGGGAA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCATTGCCTAGGATATaGTTCCTGAAGGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGALPRI*FLKEVC
Trigger: GCACACCTCCTTCAGGAACCATATCCTAGGCAATGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTTGATCGCGCTGGACTaGATGCCAAAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLIALD*MPKEMR
Trigger: CCTCATCTCCTTTGGCATCCAGTCCAGCGCGATCAA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLLCGSQ*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATTGACTCCCACACAG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCCTTGTCTTCTGTGTaGGAGTCAATGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPLSSV*ESMERY
Trigger: GTACCGCTCCATTGACTCCCACACAGAAGACAAGGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATCCACACATTGTCTCTaGTTCTTGTCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSTHCL*FLSSSQ
Trigger: CTGTGAGCTGGACAAGAACCAGAGACAATGTGTGGA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGACTTTGTACTGGTGCTaGTTCTTGGGGATGTACCTT +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWTLYWC*FLGMYL
Trigger: AAGGTACATCCCCAAGAACCAGCACCAGTACAAAGT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATACCACACTTTGTACTaGTGCTGGTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKYHTLY*CWFLGM
Trigger: CATCCCCAAGAACCAGCACCAGTACAAAGTGTGGTA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTCAGAGGCATGTTCATaGACACCAGGCGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSSEACS*TPGVCR
Trigger: CCTGCAAACGCCTGGTGTCCATGAACATGCCTCTGA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGTGCGCAAGCCAGCCTaGAGGGACAGTGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLVRKPA*RDSAFL
Trigger: AAGGAATGCACTGTCCCTCCAGGCTGGCTTGCGCAC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCTTGTTGATGTGCAGTaGGCGCTGGGTGGCGAACGT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLLVDVQ*ALGGER
Trigger: ACGTTCGCCACCCAGCGCCCACTGCACATCAACAAG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGACTCAGTGTCAGCTTaGTTGTTCCCTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKDSVSA*LFPVLL
Trigger: CAACAAGACAGGGAACAACCAAGCTGACACTGAGTC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCCTCTTGTCCTCCTCTaGGCAGGTCAGTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQPLVLL*AGQLSV
Trigger: CACCGACAACTGACCTGCCCAGAGGAGGACAAGAGG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGAATGTGGTAGGAGAATaGCTTCTCTGCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRNVVGE*LLCRRG
Trigger: CCCCCTCCTGCAGAGAAGCCATTCTCCTACCACATT...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCAATGTGGTAGGAGAATaGCTTCTCTGCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSNVVGE*LLCRRG
Trigger: CCCCCTCCTGCAGAGAAGCCATTCTCCTACCACATT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGACCAGGAGCTGCAGTaGATGGATGGGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQDQELQ*MDGKLL
Trigger: CAGCAGCTTCCCATCCATCCACTGCAGCTCCTGGTC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCACTGCTGGCACTGCCATaGAACTGTCTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLALLALP*NCLPGA
Trigger: AGCTCCAGGGAGACAGTTCCATGGCAGTGCCAGCAG...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCTGCTGGCACTGCCATaGAACTGTCTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLLLALP*NCLPGA
Trigger: AGCTCCAGGGAGACAGTTCCATGGCAGTGCCAGCAG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTTGGGGCTCTGCTaGGCGCCCCCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVPLGLC*APPLRM
Trigger: CATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGCAGCTCTCGTCCTCTaGGGCCACAGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVAALVL*GHSPVL
Trigger: CAGGACAGGGCTGTGGCCCCAGAGGACGAGAGCTGC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAAGTCCAGGTAGCCTTTaGGATCTTCTTCTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSPGSL*DLLLVA
Trigger: AGCAACTAGAAGAAGATCTCAAAGGCTACCTGGACT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATGTCTTGCACTTCTGTaGGCCAGTGAGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLCLALL*ASEAGC
Trigger: ACAACCAGCCTCACTGGCTCACAGAAGTGCAAGACA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTGTCTTGCACTTCTGTaGGCCAGTGAGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLCLALL*ASEAGC
Trigger: ACAACCAGCCTCACTGGCTCACAGAAGTGCAAGACA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGAGCATTTCTGCAGTaGAAAGGGCCAGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAGAFLQ*KGPGGL
Trigger: AAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCATCTCATCGAAATTaGACTTCCCTCCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKASHRN*TSLQRA
Trigger: AGCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGGATCTGAAACACAGTaGGGAGAGACTGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLGSETQ*GETAGS
Trigger: ACTTCCCGCAGTCTCTCCTCACTGTGTTTCAGATCC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATCCCCGGTCAGGATCTaGAACACAGTGAGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLASPVRI*NTVRRD
Trigger: GTCTCTCCTCACTGTGTTTCAGATCCTGACCGGGGA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCTAGGATATGGTTCCTaGAGGAGGTGTGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQLGYGS*RRCAGR
Trigger: CCGTCCAGCACACCTCCTTCAGGAACCATATCCTAG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCAGGTCCAGGATATTaGAGTAGTTTCGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGAGPGY*SSFGRK
Trigger: CTTTCTGCCGAAACTACTTCAATATCCTGGACCTGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTGGCCCTCAGGGGTCTaGGGACTCGCAGCACTCGTA +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVWPSGV*GLAALV
Trigger: TACGAGTGCTGCGAGTCCTCAGACCCCTGAGGGCCA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCACTGCAGCAGAGTGGTaGCAATTACGATGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSTAAEW*QLRCSR
Trigger: TCGGGAACATCGTAATTGTCACCACTCTGCTGCAGT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAAGGGTCGGGCCTTaGGGGCATATTCCACACATT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLARVGP*GHIPHI
Trigger: AATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTTGAATTCATCCAGGTaGTGGGGACCGAGGATAGAC +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLNSSR*WGPRID
Trigger: GTCTATCCTCGGTCCCCATCACCTGGATGAATTCAA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAAAACCCAGTGGGGGCTaGATTCGACGGAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKKPSGG*IRRRRV
Trigger: GACCCTCCTCCGTCGAATTCAGCCCCCACTGGGTTT...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCAGTGCATTCCTTTGTaGGGGCTTGCCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPQCIPL*GLAHQP
Trigger: GGGCTGGTGGGCAAGCCCTCACAAAGGAATGCACTG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGGCCTCCAGCCCTCCTaGAGATGTCATCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPGLQPS*RCHLRR
Trigger: CCTCCGAAGATGACATCTTCAGGAGGGCTGGAGGCC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCACTCTGATAGTAGGTaGCATGGTTGCCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLHSDSR*HGCRTG
Trigger: GCCTGTTCGGCAACCATGTCACCTACTATCAGAGTG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTGTCCCAGTCCTTCTaGAATCAAGACCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLLSQSF*NQDRFH
Trigger: GTGGAAGCGGTCTTGATTTCAGAAGGACTGGGACAG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAACAGAATATGGTTCCTaGAGGAGGTGTGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLTEYGS*RRCAGR
Trigger: CCGTCCAGCACACCTCCTTCAGGAACCATATTCTGT...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000187940.7
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATGCCTGCCAGGACAGTaGTGCCCCTGGAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKCLPGQ*CPWSRD
Trigger: ATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCA...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp ACAGAGAAGAGCAGAAGACAGCAGAAGAGCTGGGTGGAACACGTCCTGACCTCGCCCATGAGCTTGGCCTaGCGGGCGGCATCGATGGCT +
Preference number: 4 (lower is better)
Translates to: TEKSRRQQKSWVEHVLTSPMSLA*RAASMA
Trigger: AGCCATCGATGCCGCCCGGCAGGCCAAGCTCATGGG...CGAGGTCAGGACGTGTTCCACCCAGCTCTTCTGCTGTCTTCTGCTCTTCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCCATGAGCTTGGCCTaGCGGGCGGCATCGATGGCT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVPMSLA*RAASMA
Trigger: AGCCATCGATGCCGCCCGGCAGGCCAAGCTCATGGG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGCCGTGTGGCGGTTGTaGCCCCCTGCTTCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVAVWRL*PPASWV
Trigger: AACCCAAGAAGCAGGGGGGCACAACCGCCACACGGC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGACAAGAAGGGCAATGTaGAGCAGAGGCACCATGGCC +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQTRRAM*SRGTMA
Trigger: GGCCATGGTGCCTCTGCTGCACATTGCCCTTCTTGT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCGGAACATCTATTATaGCCTCCTGGTTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPEHLL*PPGCSR
Trigger: CCTGCTACAACCAGGAGGGCATAATAGATGTTCCGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAAAGTTGGTGATGCCGTaGTTGGGCCCATCCCACCCG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKKLVMP*LGPSHP
Trigger: CGGGTGGGATGGGCCCAAGCACGGCATCACCAACTT...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATCTTCTTCTAGTTGCTaGTTCTCTCGAAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSSSSC*FSRSFW
Trigger: CCAGAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTCTTCTTCTAGTTGCTaGTTCTCTCGAAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPSSSSC*FSRSFW
Trigger: CCAGAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGGGGTCAATGTCTTCTaGCTGGGTGATCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLGVNVF*LGDPVQ
Trigger: CTGGACTGGATCACCCAGGCAGAAGACATTGACCCC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGTTGGACTTAACTGCTaGACGGCATTTTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKVGLNC*TAFSSA
Trigger: TGCAGAAGAAAATGCCGTGCAGCAGTTAAGTCCAAC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGTTGGACTTAACTGCTaGACGGCATTTTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPVGLNC*TAFSSA
Trigger: TGCAGAAGAAAATGCCGTGCAGCAGTTAAGTCCAAC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTTCCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGGAA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGGAAGTTATCGAACGTaGTCCTACGGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRGSYRT*SYGSAS
Trigger: AGATGCAGACCCGTAGGAGCACGTTCGATAACTTCC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCACAGTGAGGAGAGACTaGGGGAAGTTATCGAACGTG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSTVRRD*GKLSNV
Trigger: CACGTTCGATAACTTCCCGCAGTCTCTCCTCACTGT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCAATTTTCTCCTCTTTaGTCTCCTCCACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSQFSPL*SPPRLA
Trigger: AGCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTTCATCCTCTTCCCCTaGAGTGTCTGGGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLFILFP*SVWVGV
Trigger: CACTCCAACCCAGACACTGCAGGGGAAGAGGATGAA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTTCCGGCATGGGAACTaGCTTTTCCTTAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRFRHGN*LFLKVQ
Trigger: CTGCACCTTAAGGAAAAGGCAGTTCCCATGCCGGAA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTTCCGGCATGGGAACTaGCTTTTCCTTAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSFRHGN*LFLKVQ
Trigger: CTGCACCTTAAGGAAAAGGCAGTTCCCATGCCGGAA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATGTCAAAGTCAAACTTaGTGTTCTCCCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKCQSQT*CSPSFE
Trigger: CTCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTGTCAAAGTCAAACTTaGTGTTCTCCCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPCQSQT*CSPSFE
Trigger: CTCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCGGGAGTTCTCCTCTaGACTCATAGAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAAGVLL*THRGRA
Trigger: TGCTCTCCCTCTATGAGTGCAGAGGAGAACTCCCGC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGGGTCTCCCCTTCCGTaGTGTTGCTGGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKGSPLP*CCWAQT
Trigger: AGTCTGAGCCCAGCAACAGCACGGAAGGGGAGACCC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGGGTCTCCCCTTCCGTaGTGTTGCTGGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPGSPLP*CCWAQT
Trigger: AGTCTGAGCCCAGCAACAGCACGGAAGGGGAGACCC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGACCTCGTCATCGCCTaGAGGGGGCACCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVDLVIA*RGHHLV
Trigger: GACCAGGTGGTGCCCCCTGCAGGCGATGACGAGGTC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTTGCCCACCAGCCCCTaGTCTTTTCGCTTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLPTSP*SFRFLN
Trigger: ATTCAAGAAGCGAAAAGAGCAGGGGCTGGTGGGCAA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTTGCCCACCAGCCCCTaGTCTTTTCGCTTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLPTSP*SFRFLN
Trigger: ATTCAAGAAGCGAAAAGAGCAGGGGCTGGTGGGCAA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGAGGGGGCTCAAGCCTaGCACTGCCAATGCCTGATG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKEGAQA*HCQCLM
Trigger: CATCAGGCATTGGCAGTGGCAGGCTTGAGCCCCCTC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCACTGAGGATGTTGTCTaGGGCGTTCTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLTEDVV*GVLHLL
Trigger: GAGGAGATGGAGAACGCCGCAGACAACATCCTCAGT...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGTGTACCTCGGTGATTaGTATATCAACAATGCTACC +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWVYLGD*YINNAT
Trigger: GGTAGCATTGTTGATATAGCAATCACCGAGGTACAC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCTCCTCTGCACTCCTTaGACAGCTCACGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLLLCTP*TAHVST
Trigger: TGTGCTCACGTGAGCTGTGCAAGGAGTGCAGAGGAG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTTGGTGGTTTTCCTCTaGAACGTACATCCTCGTGTT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLVVFL*NVHPRV
Trigger: AACACGAGGATGTACGTTCCAGAGGAAAACCACCAA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGGCATGAGCTGGGCGTaGGCTCCCATAGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPGMSWA*APIVGT
Trigger: GGTTCCAACTATGGGAGCCCACGCCCAGCTCATGCC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGTCCTGCAGCTGCATTaGCATTCATGTTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSVLQLH*HSCWHE
Trigger: CTCATGCCAACATGAATGCCAATGCAGCTGCAGGAC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCCACTCGTTCCAGGTTaGAGTTGGTGGCGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLPLVPG*SWWRWS
Trigger: ACTCCAACGCCACCAACTCCAACCTGGAACGAGTGG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTGGCCCCATCAGCTTTaGTTGCTTGTTCTAAAATTG +
Preference number: 4 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWWPHQL*LLVLKL
Trigger: CAATTTTAGAACAAGCAACCAAAGCTGATGGGGCCA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACTTTCTCCCTCTCTTTaGAAAACTCCCCGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLSPSL*KTPRSK
Trigger: TTTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTTCTCTCGAAGCTTCTaGAAATCTCCTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGFSRSF*KSPRAL
Trigger: CAAAGCCCGAGGAGATTTCCAGAAGCTTCGAGAGAA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGACTCAGTCTCACTTGTaGGCATGCTCATGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGTQSHL*ACSCFE
Trigger: CTCGAAACATGAGCATGCCCACAAGTGAGACTGAGT...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCCAGGAGGGCTTTATTaGCTGTGTCTTGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRPGGLY*LCLALL
Trigger: CAGAAGTGCAAGACACAGCCAATAAAGCCCTCCTGG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCAGGAGGGCTTTATTaGCTGTGTCTTGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPGGLY*LCLALL
Trigger: CAGAAGTGCAAGACACAGCCAATAAAGCCCTCCTGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTCTTCCTCCTCCTTTTaGGCTGAGGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLSSSSF*AEVRLS
Trigger: GGAGAGCCTGACCTCAGCCCAAAAGGAGGAGGAAGA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKLGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTATCCTCGTTTTCACTaGGCTGGAGGTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGYPRFH*AGGHPC
Trigger: ACATGGATGACCTCCAGCCCAGTGAAAACGAGGATA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGTGTCTGGGTTGGAGTaGGGACTCTTATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRVSGLE*GLLSSF
Trigger: AAACGAGGATAAGAGTCCCCACTCCAACCCAGACAC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCATTGCCTAGGATATaGTTCCTGAAGGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSALPRI*FLKEVC
Trigger: GCACACCTCCTTCAGGAACCATATCCTAGGCAATGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTTGATCGCGCTGGACTaGATGCCAAAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLLIALD*MPKEMR
Trigger: CCTCATCTCCTTTGGCATCCAGTCCAGCGCGATCAA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATTGATCGCGCTGGACTaGATGCCAAAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLLIALD*MPKEMR
Trigger: CCTCATCTCCTTTGGCATCCAGTCCAGCGCGATCAA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCACTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLALCGSQ*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATTGACTCCCACACAG...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCACGGTAGTTGTAGATaGGGCCCTTGTCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRHGSCR*GPCLLC
Trigger: ACACAGAAGACAAGGGCCCCATCTACAACTACCGTG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTCCACACATTGTCTCTaGTTCTTGTCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGSTHCL*FLSSSQ
Trigger: CTGTGAGCTGGACAAGAACCAGAGACAATGTGTGGA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCACTTTGTACTGGTGCTaGTTCTTGGGGATGTACCTT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPTLYWC*FLGMYL
Trigger: AAGGTACATCCCCAAGAACCAGCACCAGTACAAAGT...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCACACTTCTTGCCTaGCATGCAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAGTLLA*HAGQHD
Trigger: ATCATGCTGGCCTGCATGCCAGGCAAGAAGTGTGCC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGCTGGGCTCAGACTCTaGGGCACACTTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKAGLRL*GTLLAW
Trigger: CCAGGCAAGAAGTGTGCCCCAGAGTCTGAGCCCAGC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGCTGGGCTCAGACTCTaGGGCACACTTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPAGLRL*GTLLAW
Trigger: CCAGGCAAGAAGTGTGCCCCAGAGTCTGAGCCCAGC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATTTCCCAAAACCCAGTaGGGGCTGAATTCGACGGAG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLFPKTQ*GLNSTE
Trigger: CTCCGTCGAATTCAGCCCCCACTGGGTTTTGGGAAA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTCAGAGGCATGTTCATaGACACCAGGCGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLSEACS*TPGVCR
Trigger: CCTGCAAACGCCTGGTGTCCATGAACATGCCTCTGA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATCAGAGGCATGTTCATaGACACCAGGCGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLSEACS*TPGVCR
Trigger: CCTGCAAACGCCTGGTGTCCATGAACATGCCTCTGA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTCAGATCCCCAGAGATaGCCCGCCGGATCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSDPQR*PAGSQA
Trigger: GGCCTGAGATCCGGCGGGCCATCTCTGGGGATCTGA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGCGTCAGCCAGCTCCTaGGTGGTGACCTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPASASS*VVTSMN
Trigger: GTTCATCGAGGTCACCACCCAGGAGCTGGCTGACGC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGCAGCTCTCGTCCTCTaGGGCCACAGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVAALVL*GHSPVL
Trigger: CAGGACAGGGCTGTGGCCCCAGAGGACGAGAGCTGC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGGCACACAACGGACATaGTGGCCACATGCAATGGGA +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLGTQRT*WPHAMG
Trigger: TCCCATTGCATGTGGCCACCATGTCCGTTGTGTGCC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCACGTTTTCAGTGTTaGCAGACTCAGTCTCACTTG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPRFQC*QTQSHL
Trigger: CAAGTGAGACTGAGTCTGTCAACACTGAAAACGTGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTGCGCCAGTAGCGGCTaGATTTGGATTTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLCASSG*IWIWRS
Trigger: GGATCTCCAAATCCAAATTCAGCCGCTACTGGCGCA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTGCCCAGGGGAGACATaGTCTTCGTCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPCPGET*SSSPPG
Trigger: TCCTGGTGGAGACGAAGATCATGTCTCCCCTGGGCA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCATCTCATCGAAATTaGACTTCCCTCCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGASHRN*TSLQRA
Trigger: AGCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATATAGAGCTTTCCCTTaGAGAGCTGGACCCCAATGC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLYRAFP*RAGPQC
Trigger: GCATTGGGGTCCAGCTCTTCAAGGGAAAGCTCTATA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTATAGAGCTTTCCCTTaGAGAGCTGGACCCCAATGC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLYRAFP*RAGPQC
Trigger: GCATTGGGGTCCAGCTCTTCAAGGGAAAGCTCTATA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTATTCATGGCGATTTTaGAGAGGCAGCTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSYSWRF*RGSSGH
Trigger: ATGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTATTCATGGCGATTTTaGAGAGGCAGCTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRYSWRF*RGSSGH
Trigger: ATGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTTGAATTCATCCAGGTaGTGGGGACCGAGGATAGAC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLLNSSR*WGPRID
Trigger: GTCTATCCTCGGTCCCCATCACCTGGATGAATTCAA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTTGCAGGCCACACGGTaGGGACACAATTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLLQATR*GHNFPK
Trigger: TTTTGGGAAATTGTGTCCTCACCGTGTGGCCTGCAA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCACTCTGATAGTAGGTaGCATGGTTGCCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQHSDSR*HGCRTG
Trigger: GCCTGTTCGGCAACCATGTCACCTACTATCAGAGTG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPCSLSC*CAVGAG
Trigger: CCCAGCGCCCACTGCACATCAACAAGACAGGGAACA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCTTCTCATGGGACGGTaGCTCAGTGTCAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLLLMGR*LSVSLV
Trigger: AACCAAGCTGACACTGAGTCACCGTCCCATGAGAAG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGCCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCTGTCCCAGTCCTTCTaGAATCAAGACCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLLSQSF*NQDRFH
Trigger: GTGGAAGCGGTCTTGATTTCAGAAGGACTGGGACAG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSMNLGS*ANCPSP
Trigger: AGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCAT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAACAGAATATGGTTCCTaGAGGAGGTGTGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLATEYGS*RRCAGR
Trigger: CCGTCCAGCACACCTCCTTCAGGAACCATATTCTGT...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000187940.7
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCTCGGGAGCAAGTCCTaGAGCTGCATTGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQLGSKS*SCIGIH
Trigger: ATGAATGCCAATGCAGCTGCAGGACTTGCTCCCGAG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTGCCTGCCAGGACAGTaGTGCCCCTGGAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVCLPGQ*CPWSRD
Trigger: ATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACCCATGAGCTTGGCCTaGCGGGCGGCATCGATGGCT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSPMSLA*RAASMA
Trigger: AGCCATCGATGCCGCCCGGCAGGCCAAGCTCATGGG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTAAGTTGGTGATGCCGTaGTTGGGCCCATCCCACCCG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVKLVMP*LGPSHP
Trigger: CGGGTGGGATGGGCCCAAGCACGGCATCACCAACTT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCAGATCTTCTTCTAGTTaGTGCTTCTCTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPRSSSS*CFSRSF
Trigger: GAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGATCT...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGAGGATGCCACAAGGTTaGTCAAGGAATTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRRMPQG*SRNSST
Trigger: GGTACTGGAATTCCTTGAGCAACCTTGTGGCATCCT...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCAGGATGCCACAAGGTTaGTCAAGGAATTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSRMPQG*SRNSST
Trigger: GGTACTGGAATTCCTTGAGCAACCTTGTGGCATCCT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGGAAGTTATCGAACGTaGTCCTACGGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLGSYRT*SYGSAS
Trigger: AGATGCAGACCCGTAGGAGCACGTTCGATAACTTCC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACAATTTTCTCCTCTTTaGTCTCCTCCACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLQFSPL*SPPRLA
Trigger: AGCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCAATTTTCTCCTCTTTaGTCTCCTCCACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLQFSPL*SPPRLA
Trigger: AGCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATTCATCCTCTTCCCCTaGAGTGTCTGGGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAFILFP*SVWVGV
Trigger: CACTCCAACCCAGACACTGCAGGGGAAGAGGATGAA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGCCTTTTCCTTAAGGTaGAGCTCAGACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKAFSLR*SSDRGR
Trigger: CCGGCCCCTGTCTGAGCTGCACCTTAAGGAAAAGGC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTTCCGGCATGGGAACTaGCTTTTCCTTAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLFRHGN*LFLKVQ
Trigger: CTGCACCTTAAGGAAAAGGCAGTTCCCATGCCGGAA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGCTGAAGATGAAAAATaGACTGGCTTCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLAEDEK*TGFRHG
Trigger: CCCATGCCGGAAGCCAGTGCATTTTTCATCTTCAGC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATTCCTGAAGGAGGTGTaGTGGACGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKFLKEV*WTGSSA
Trigger: TGCTGAGGACCCCGTCCAGCACACCTCCTTCAGGAA...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTTCCTGAAGGAGGTGTaGTGGACGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPFLKEV*WTGSSA
Trigger: TGCTGAGGACCCCGTCCAGCACACCTCCTTCAGGAA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTACTCTTGTTCCCCCTaGTCCTGGAAGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLYSCSP*SWKVTM
Trigger: CATTGTCACCTTCCAGGAGCAGGGGGAACAAGAGTA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGGGTCTCCCCTTCCGTaGTGTTGCTGGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVGSPLP*CCWAQT
Trigger: AGTCTGAGCCCAGCAACAGCACGGAAGGGGAGACCC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGACCTCGTCATCGCCTaGAGGGGGCACCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSDLVIA*RGHHLV
Trigger: GACCAGGTGGTGCCCCCTGCAGGCGATGACGAGGTC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCAATGTCATGCAAGGTaGGCAAGCCAGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPQCHAR*ASQPGG
Trigger: CCCTCCAGGCTGGCTTGCGCACCTTGCATGACATTG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACAATGTCATGCAAGGTaGGCAAGCCAGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKQCHAR*ASQPGG
Trigger: CCCTCCAGGCTGGCTTGCGCACCTTGCATGACATTG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTCAGGCCCAATGTCATaGAAGGTGCGCAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPSGPMS*KVRKPA
Trigger: GGCTGGCTTGCGCACCTTGCATGACATTGGGCCTGA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGAGGAAAGTTGCCCCTaGTGTCACTCTGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLEESCP*CHSDSR
Trigger: CCTACTATCAGAGTGACAGCAGGGGCAACTTTCCTC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCACGTCTGAGGAAAGTTaGCCCTGCTGTCACTCTGAT +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLTSEES*PCCHSD
Trigger: ATCAGAGTGACAGCAGGGGCAACTTTCCTCAGACGT...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCTCAAGCCTGCCACTaGCAATGCCTGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQAQACH*QCLMMN
Trigger: GTTCATCATCAGGCATTGGCAGTGGCAGGCTTGAGC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACCTCAGACCAGGAGCTaGAGTGGATGGATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKPQTRS*SGWMGS
Trigger: GCTTCCCATCCATCCACTGCAGCTCCTGGTCTGAGG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCCGCTTCCACCAGGCTaGTGGCACTGCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVPLPPG*WHCHGT
Trigger: AGTTCCATGGCAGTGCCAGCAGCCTGGTGGAAGCGG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGACTGAGGATGTTGTCTaGGGCGTTCTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQTEDVV*GVLHLL
Trigger: GAGGAGATGGAGAACGCCGCAGACAACATCCTCAGT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGTGTACCTCGGTGATTaGTATATCAACAATGCTACC +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKVYLGD*YINNAT
Trigger: GGTAGCATTGTTGATATAGCAATCACCGAGGTACAC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGGCATGAGCTGGGCGTaGGCTCCCATAGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVGMSWA*APIVGT
Trigger: GGTTCCAACTATGGGAGCCCACGCCCAGCTCATGCC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCCAGGTTGGAGTTGGTaGCGTTGGAGTCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPPGWSW*RWSRLP
Trigger: CGGAAGACGACTCCAACGCCACCAACTCCAACCTGG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTTCCAGGTTGGAGTTaGTGGCGTTGGAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAVPGWS*WRWSRL
Trigger: AAGACGACTCCAACGCCACCAACTCCAACCTGGAAC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGTTCCAGGTTGGAGTTaGTGGCGTTGGAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLVPGWS*WRWSRL
Trigger: AAGACGACTCCAACGCCACCAACTCCAACCTGGAAC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATGGCCCCATCAGCTTTaGTTGCTTGTTCTAAAATTG +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKWPHQL*LLVLKL
Trigger: CAATTTTAGAACAAGCAACCAAAGCTGATGGGGCCA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCTTTCTCCCTCTCTTTaGAAAACTCCCCGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGLSPSL*KTPRSK
Trigger: TTTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTTCTCTCGAAGCTTCTaGAAATCTCCTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSFSRSF*KSPRAL
Trigger: CAAAGCCCGAGGAGATTTCCAGAAGCTTCGAGAGAA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGCAGCAGGGAGGCAATaGAGCGCACTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPAAGRQ*SALSSA
Trigger: TGCTGAACTCAGTGCGCTCCATTGCCTCCCTGCTGC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTATCCTCGTTTTCACTaGGCTGGAGGTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSYPRFH*AGGHPC
Trigger: ACATGGATGACCTCCAGCCCAGTGAAAACGAGGATA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGTGTCTGGGTTGGAGTaGGGACTCTTATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLVSGLE*GLLSSF
Trigger: AAACGAGGATAAGAGTCCCCACTCCAACCCAGACAC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCTGCAGTGTCTGGGTTaGAGTGGGGACTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLLQCLG*SGDSYP
Trigger: AGGATAAGAGTCCCCACTCCAACCCAGACACTGCAG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCTGCAGTGTCTGGGTTaGAGTGGGGACTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQLQCLG*SGDSYP
Trigger: AGGATAAGAGTCCCCACTCCAACCCAGACACTGCAG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGCATTGCCTAGGATATaGTTCCTGAAGGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLALPRI*FLKEVC
Trigger: GCACACCTCCTTCAGGAACCATATCCTAGGCAATGC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCACGGTAGTTGTAGATaGGGCCCTTGTCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLHGSCR*GPCLLC
Trigger: ACACAGAAGACAAGGGCCCCATCTACAACTACCGTG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGACTTTGTACTGGTGCTaGTTCTTGGGGATGTACCTT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGTLYWC*FLGMYL
Trigger: AAGGTACATCCCCAAGAACCAGCACCAGTACAAAGT...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTACCACACTTTGTACTaGTGCTGGTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSYHTLY*CWFLGM
Trigger: CATCCCCAAGAACCAGCACCAGTACAAAGTGTGGTA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGCTGGGCTCAGACTCTaGGGCACACTTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVAGLRL*GTLLAW
Trigger: CCAGGCAAGAAGTGTGCCCCAGAGTCTGAGCCCAGC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATCAGAGGCATGTTCATaGACACCAGGCGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLASEACS*TPGVCR
Trigger: CCTGCAAACGCCTGGTGTCCATGAACATGCCTCTGA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACTTGTTGATGTGCAGTaGGCGCTGGGTGGCGAACGT +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKLVDVQ*ALGGER
Trigger: ACGTTCGCCACCCAGCGCCCACTGCACATCAACAAG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTCCACCAGCTTCTCATaGGACGGTGACTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLSTSFS*DGDSVS
Trigger: TGACACTGAGTCACCGTCCCATGAGAAGCTGGTGGA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATCCACCAGCTTCTCATaGGACGGTGACTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLASTSFS*DGDSVS
Trigger: TGACACTGAGTCACCGTCCCATGAGAAGCTGGTGGA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCCTCTTGTCCTCCTCTaGGCAGGTCAGTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPPLVLL*AGQLSV
Trigger: CACCGACAACTGACCTGCCCAGAGGAGGACAAGAGG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACCTCTTGTCCTCCTCTaGGCAGGTCAGTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKPLVLL*AGQLSV
Trigger: CACCGACAACTGACCTGCCCAGAGGAGGACAAGAGG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGCTGCAGTGGATGGATaGGAAGCTGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLAAVDG*EAAVEF
Trigger: AAACTCAACAGCAGCTTCCCATCCATCCACTGCAGC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGCTGCAGTGGATGGATaGGAAGCTGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLAAVDG*EAAVEF
Trigger: AAACTCAACAGCAGCTTCCCATCCATCCACTGCAGC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGACCAGGAGCTGCAGTaGATGGATGGGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPDQELQ*MDGKLL
Trigger: CAGCAGCTTCCCATCCATCCACTGCAGCTCCTGGTC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCTGCTGGCACTGCCATaGAACTGTCTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPLLALP*NCLPGA
Trigger: AGCTCCAGGGAGACAGTTCCATGGCAGTGCCAGCAG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGCGTCAGCCAGCTCCTaGGTGGTGACCTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVASASS*VVTSMN
Trigger: GTTCATCGAGGTCACCACCCAGGAGCTGGCTGACGC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCACTCAGTCTCACTTGTaGGCATGCTCACATGGGTTT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSTQSHL*ACSHGF
Trigger: AAACCCATGTGAGCATGCCCACAAGTGAGACTGAGT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000112825.9
ENSMUST00000188522.7
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGATAGAGGGAGAGCATTaGGTATGTTCAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRIEGEH*VCSAGC
Trigger: ACACCCAGCTGAACATACCCAATGCTCTCCCTCTAT...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGAGTCCAGGTAGCCTTTaGGATCTTCTTCTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRSPGSL*DLLLVA
Trigger: AGCAACTAGAAGAAGATCTCAAAGGCTACCTGGACT...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGGAGCATTTCTGCAGTaGAAAGGGCCAGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPGAFLQ*KGPGGL
Trigger: AAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTCCCCGGTCAGGATCTaGAACACAGTGAGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPSPVRI*NTVRRD
Trigger: GTCTCTCCTCACTGTGTTTCAGATCCTGACCGGGGA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGCAGGTCCAGGATATTaGAGTAGTTTCGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLAGPGY*SSFGRK
Trigger: CTTTCTGCCGAAACTACTTCAATATCCTGGACCTGC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGACTGCAGCAGAGTGGTaGCAATTACGATGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQTAAEW*QLRCSR
Trigger: TCGGGAACATCGTAATTGTCACCACTCTGCTGCAGT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTATAGAGCTTTCCCTTaGAGAGCTGGACCCCAATGC +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQYRAFP*RAGPQC
Trigger: GCATTGGGGTCCAGCTCTTCAAGGGAAAGCTCTATA...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTATAGAGCTTTCCCTTaGAGAGCTGGACCCCAATGC +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLYRAFP*RAGPQC
Trigger: GCATTGGGGTCCAGCTCTTCAAGGGAAAGCTCTATA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATTGAATTCATCCAGGTaGTGGGGACCGAGGATAGAC +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLALNSSR*WGPRID
Trigger: GTCTATCCTCGGTCCCCATCACCTGGATGAATTCAA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTAAACCCAGTGGGGGCTaGATTCGACGGAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVKPSGG*IRRRRV
Trigger: GACCCTCCTCCGTCGAATTCAGCCCCCACTGGGTTT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATTGCAGGCCACACGGTaGGGACACAATTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLALQATR*GHNFPK
Trigger: TTTTGGGAAATTGTGTCCTCACCGTGTGGCCTGCAA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGGCCTCCAGCCCTCCTaGAGATGTCATCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVGLQPS*RCHLRR
Trigger: CCTCCGAAGATGACATCTTCAGGAGGGCTGGAGGCC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVCSLSC*CAVGAG
Trigger: CCCAGCGCCCACTGCACATCAACAAGACAGGGAACA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGCCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLMNLGS*ANCPSP
Trigger: AGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCAT...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLMNLGS*ANCPSP
Trigger: AGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCAT...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTGCCTGCCAGGACAGTaGTGCCCCTGGAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVCLPGQ*CPWSRD
Trigger: ATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGCCGTGTGGCGGTTGTaGCCCCCTGCTTCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSAVWRL*PPASWV
Trigger: AACCCAAGAAGCAGGGGGGCACAACCGCCACACGGC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGACAAGAAGGGCAATGTaGAGCAGAGGCACCATGGCC +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPTRRAM*SRGTMA
Trigger: GGCCATGGTGCCTCTGCTGCACATTGCCCTTCTTGT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTAAGTTGGTGATGCCGTaGTTGGGCCCATCCCACCCG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVKLVMP*LGPSHP
Trigger: CGGGTGGGATGGGCCCAAGCACGGCATCACCAACTT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTCTTCTTCTAGTTGCTaGTTCTCTCGAAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRSSSSC*FSRSFW
Trigger: CCAGAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGGGGTCAATGTCTTCTaGCTGGGTGATCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKGVNVF*LGDPVQ
Trigger: CTGGACTGGATCACCCAGGCAGAAGACATTGACCCC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATCTCACTTGTGGGCATaGTCATGTTTCGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLSHLWA*SCFEAC
Trigger: ACAAGCCTCGAAACATGAGCATGCCCACAAGTGAGA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGTTGGACTTAACTGCTaGACGGCATTTTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRVGLNC*TAFSSA
Trigger: TGCAGAAGAAAATGCCGTGCAGCAGTTAAGTCCAAC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTTCCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGGAA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATTCCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGGAA...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGACAGTGAGGAGAGACTaGGGGAAGTTATCGAACGTG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQTVRRD*GKLSNV
Trigger: CACGTTCGATAACTTCCCGCAGTCTCTCCTCACTGT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAACAGTGAGGAGAGACTaGGGGAAGTTATCGAACGTG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLATVRRD*GKLSNV
Trigger: CACGTTCGATAACTTCCCGCAGTCTCTCCTCACTGT...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCAATTTTCTCCTCTTTaGTCTCCTCCACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLQFSPL*SPPRLA
Trigger: AGCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCAATTTTCTCCTCTTTaGTCTCCTCCACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQQFSPL*SPPRLA
Trigger: AGCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTTCCGGCATGGGAACTaGCTTTTCCTTAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQFRHGN*LFLKVQ
Trigger: CTGCACCTTAAGGAAAAGGCAGTTCCCATGCCGGAA...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCTGAAGATGAAAAATaGACTGGCTTCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAAEDEK*TGFRHG
Trigger: CCCATGCCGGAAGCCAGTGCATTTTTCATCTTCAGC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCTGAAGATGAAAAATaGACTGGCTTCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLAEDEK*TGFRHG
Trigger: CCCATGCCGGAAGCCAGTGCATTTTTCATCTTCAGC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTACTCTTGTTCCCCCTaGTCCTGGAAGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQYSCSP*SWKVTM
Trigger: CATTGTCACCTTCCAGGAGCAGGGGGAACAAGAGTA...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGCGGGAGTTCTCCTCTaGACTCATAGAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKAGVLL*THRGRA
Trigger: TGCTCTCCCTCTATGAGTGCAGAGGAGAACTCCCGC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGCGGGAGTTCTCCTCTaGACTCATAGAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPAGVLL*THRGRA
Trigger: TGCTCTCCCTCTATGAGTGCAGAGGAGAACTCCCGC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGGGTCTCCCCTTCCGTaGTGTTGCTGGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVGSPLP*CCWAQT
Trigger: AGTCTGAGCCCAGCAACAGCACGGAAGGGGAGACCC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTAGAAGACAGCAAAGCTaGTGCCACAGGGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVRRQQS*CHRGSP
Trigger: GGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCTTCT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATTGCCCACCAGCCCCTaGTCTTTTCGCTTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLALPTSP*SFRFLN
Trigger: ATTCAAGAAGCGAAAAGAGCAGGGGCTGGTGGGCAA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTCAGGCCCAATGTCATaGAAGGTGCGCAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSGPMS*KVRKPA
Trigger: GGCTGGCTTGCGCACCTTGCATGACATTGGGCCTGA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGAGGAAAGTTGCCCCTaGTGTCACTCTGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAEESCP*CHSDSR
Trigger: CCTACTATCAGAGTGACAGCAGGGGCAACTTTCCTC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAACGTCTGAGGAAAGTTaGCCCTGCTGTCACTCTGAT +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLATSEES*PCCHSD
Trigger: ATCAGAGTGACAGCAGGGGCAACTTTCCTCAGACGT...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGCAGGCTGGGCTCACTaGAGTACTCGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVAGWAH*STRLLH
Trigger: GTGAAGAAGCCGAGTACTGCAGTGAGCCCAGCCTGC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGAGGGGGCTCAAGCCTaGCACTGCCAATGCCTGATG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVEGAQA*HCQCLM
Trigger: CATCAGGCATTGGCAGTGGCAGGCTTGAGCCCCCTC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCCTCAGACCAGGAGCTaGAGTGGATGGATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVPQTRS*SGWMGS
Trigger: GCTTCCCATCCATCCACTGCAGCTCCTGGTCTGAGG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCTTCCACCAGGCTaGTGGCACTGCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVPLPPG*WHCHGT
Trigger: AGTTCCATGGCAGTGCCAGCAGCCTGGTGGAAGCGG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACATTGGCATTCATGTTaGCATGAGCTGGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKHWHSC*HELGVG
Trigger: GCCCACGCCCAGCTCATGCCAACATGAATGCCAATG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGTCCTGCAGCTGCATTaGCATTCATGTTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQVLQLH*HSCWHE
Trigger: CTCATGCCAACATGAATGCCAATGCAGCTGCAGGAC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATGGAGTTGGTGGCGTTaGAGTCGTCTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKWSWWR*SRLPER
Trigger: CCTTTCCGGAAGACGACTCCAACGCCACCAACTCCA...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTGGAGTTGGTGGCGTTaGAGTCGTCTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPWSWWR*SRLPER
Trigger: CCTTTCCGGAAGACGACTCCAACGCCACCAACTCCA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCCAGGTTGGAGTTGGTaGCGTTGGAGTCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVPGWSW*RWSRLP
Trigger: CGGAAGACGACTCCAACGCCACCAACTCCAACCTGG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCCACTCGTTCCAGGTTaGAGTTGGTGGCGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPPLVPG*SWWRWS
Trigger: ACTCCAACGCCACCAACTCCAACCTGGAACGAGTGG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAAATCTCCTCGGGCTTTaGCTTTCTCCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLANLLGL*LSPSLW
Trigger: CCAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATT...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTAATCTCCTCGGGCTTTaGCTTTCTCCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLNLLGL*LSPSLW
Trigger: CCAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATT...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCACTCAGTCTCACTTGTaGGCATGCTCATGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLTQSHL*ACSCFE
Trigger: CTCGAAACATGAGCATGCCCACAAGTGAGACTGAGT...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTCCGATGGGCAAGCCTaGCTCCACAGTTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPSDGQA*LHSFLP
Trigger: AGGGAGAAAACTGTGGAGCCAGGCTTGCCCATCGGA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCCAGGAGGGCTTTATTaGCTGTGTCTTGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQPGGLY*LCLALL
Trigger: CAGAAGTGCAAGACACAGCCAATAAAGCCCTCCTGG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGCAGCAGGGAGGCAATaGAGCGCACTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVAAGRQ*SALSSA
Trigger: TGCTGAACTCAGTGCGCTCCATTGCCTCCCTGCTGC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGTGTCTGGGTTGGAGTaGGGACTCTTATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQVSGLE*GLLSSF
Trigger: AAACGAGGATAAGAGTCCCCACTCCAACCCAGACAC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATTCCCCTGCAGTGTCTaGGTTGGAGTGGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKFPCSV*VGVGTL
Trigger: AAGAGTCCCCACTCCAACCCAGACACTGCAGGGGAA...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCGGAACCTGTTGTTTaGGCTGAAGATGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSAEPVV*AEDEKC
Trigger: GCATTTTTCATCTTCAGCCCAAACAACAGGTTCCGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCATTGCCTAGGATATaGTTCCTGAAGGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQALPRI*FLKEVC
Trigger: GCACACCTCCTTCAGGAACCATATCCTAGGCAATGC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKLCGSQ*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATTGACTCCCACACAG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPLCGSQ*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATTGACTCCCACACAG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCACGGTAGTTGTAGATaGGGCCCTTGTCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQHGSCR*GPCLLC
Trigger: ACACAGAAGACAAGGGCCCCATCTACAACTACCGTG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCACGGTAGTTGTAGATaGGGCCCTTGTCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLHGSCR*GPCLLC
Trigger: ACACAGAAGACAAGGGCCCCATCTACAACTACCGTG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCACTTTGTACTGGTGCTaGTTCTTGGGGATGTACCTT +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSTLYWC*FLGMYL
Trigger: AAGGTACATCCCCAAGAACCAGCACCAGTACAAAGT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATACCACACTTTGTACTaGTGCTGGTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLYHTLY*CWFLGM
Trigger: CATCCCCAAGAACCAGCACCAGTACAAAGTGTGGTA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTTGGGTATGTTCAGCTaGATTAGTCTCACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLGMFS*ISLTEN
Trigger: ATTCTCAGTGAGACTAATCCAGCTGAACATACCCAA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGTGCGCAAGCCAGCCTaGAGGGACAGTGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVVRKPA*RDSAFL
Trigger: AAGGAATGCACTGTCCCTCCAGGCTGGCTTGCGCAC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATCAGATCCCCAGAGATaGCCCGCCGGATCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSSDPQR*PAGSQA
Trigger: GGCCTGAGATCCGGCGGGCCATCTCTGGGGATCTGA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGACTCAGTGTCAGCTTaGTTGTTCCCTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLDSVSA*LFPVLL
Trigger: CAACAAGACAGGGAACAACCAAGCTGACACTGAGTC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGACTCAGTGTCAGCTTaGTTGTTCCCTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLDSVSA*LFPVLL
Trigger: CAACAAGACAGGGAACAACCAAGCTGACACTGAGTC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTGGCATTGGAGCCCGTaGATGAGTAGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVWHWSP*MSSCWG
Trigger: CCCCCAGCAGCTACTCATCCACGGGCTCCAATGCCA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCTGCAGTGGATGGATaGGAAGCTGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAAAVDG*EAAVEF
Trigger: AAACTCAACAGCAGCTTCCCATCCATCCACTGCAGC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCTGCAGTGGATGGATaGGAAGCTGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLAAVDG*EAAVEF
Trigger: AAACTCAACAGCAGCTTCCCATCCATCCACTGCAGC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCTGCAGTGGATGGATaGGAAGCTGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQAAVDG*EAAVEF
Trigger: AAACTCAACAGCAGCTTCCCATCCATCCACTGCAGC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGACCAGGAGCTGCAGTaGATGGATGGGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVDQELQ*MDGKLL
Trigger: CAGCAGCTTCCCATCCATCCACTGCAGCTCCTGGTC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCGAGTGACTGGAGAGTaGCTGGTATGGGGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVRVTGE*LVWGCG
Trigger: TCCACACCCCCATACCAGCCACTCTCCAGTCACTCG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
CDS-3UTR TCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAAGTCCAGGTAGCCTTTaGGATCTTCTTCTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLSPGSL*DLLLVA
Trigger: AGCAACTAGAAGAAGATCTCAAAGGCTACCTGGACT...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCCACGTTTTCAGTGTTaGCAGACTCAGTCTCACTTG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLPRFQC*QTQSHL
Trigger: CAAGTGAGACTGAGTCTGTCAACACTGAAAACGTGG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGGAGCATTTCTGCAGTaGAAAGGGCCAGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVGAFLQ*KGPGGL
Trigger: AAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGGATCTGAAACACAGTaGGGAGAGACTGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPGSETQ*GETAGS
Trigger: ACTTCCCGCAGTCTCTCCTCACTGTGTTTCAGATCC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTCCCCGGTCAGGATCTaGAACACAGTGAGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSPVRI*NTVRRD
Trigger: GTCTCTCCTCACTGTGTTTCAGATCCTGACCGGGGA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTATTCATGGCGATTTTaGAGAGGCAGCTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLYSWRF*RGSSGH
Trigger: ATGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATATTCATGGCGATTTTaGAGAGGCAGCTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAYSWRF*RGSSGH
Trigger: ATGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCAGTTGTTGTTCCGATTaGTCTCTGTGGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSSCCSD*SLWCHS
Trigger: TGAATGACACCACAGAGATCAATCGGAACAACAACT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACAGTGCATTCCTTTGTaGGGGCTTGCCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSQCIPL*GLAHQP
Trigger: GGGCTGGTGGGCAAGCCCTCACAAAGGAATGCACTG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACTTCTCATGGGACGGTaGCTCAGTGTCAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKLLMGR*LSVSLV
Trigger: AACCAAGCTGACACTGAGTCACCGTCCCATGAGAAG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CCTCTAGTTCTCTTGCTGCTGACACCTGTTTCAGAGCTGGGGCTTGTTGAAGAAGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: PLVLLLLTPVSELGLVEEGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...TTCTTCAACAAGCCCCAGCTCTGAAACAGGTGTCAGCAGCAAGAGAACTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCAGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLMNLGS*ANCPSP
Trigger: AGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCAT...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAMNLGS*ANCPSP
Trigger: AGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCAT...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAAAATGTAGAAACAGTTaGGTTGAGCTTCATGTACCA +
Preference number: 4 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKKCRNS*VELHVP
Trigger: TGGTACATGAAGCTCAACTCAACTGTTTCTACATTT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATGCCTGCCAGGACAGTaGTGCCCCTGGAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSCLPGQ*CPWSRD
Trigger: ATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTTGGGTTTCCCATACTaGTGCCGCTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVLGFPY*CRFRCV
Trigger: CACACAGCGGAAGCGGCAGCAGTATGGGAAACCCAA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAAAGTTGGTGATGCCGTaGTTGGGCCCATCCCACCCG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSKLVMP*LGPSHP
Trigger: CGGGTGGGATGGGCCCAAGCACGGCATCACCAACTT...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATCTTCTTCTAGTTGCTaGTTCTCTCGAAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLSSSSC*FSRSFW
Trigger: CCAGAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCAGATCTTCTTCTAGTTaGTGCTTCTCTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSRSSSS*CFSRSF
Trigger: GAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGATCT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGTTGGACTTAACTGCTaGACGGCATTTTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLVGLNC*TAFSSA
Trigger: TGCAGAAGAAAATGCCGTGCAGCAGTTAAGTCCAAC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGTTGGACTTAACTGCTaGACGGCATTTTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLVGLNC*TAFSSA
Trigger: TGCAGAAGAAAATGCCGTGCAGCAGTTAAGTCCAAC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAAGGATGCCACAAGGTTaGTCAAGGAATTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLARMPQG*SRNSST
Trigger: GGTACTGGAATTCCTTGAGCAACCTTGTGGCATCCT...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATTCATCCTCTTCCCCTaGAGTGTCTGGGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKFILFP*SVWVGV
Trigger: CACTCCAACCCAGACACTGCAGGGGAAGAGGATGAA...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTTCATCCTCTTCCCCTaGAGTGTCTGGGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPFILFP*SVWVGV
Trigger: CACTCCAACCCAGACACTGCAGGGGAAGAGGATGAA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGCCTTTTCCTTAAGGTaGAGCTCAGACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVAFSLR*SSDRGR
Trigger: CCGGCCCCTGTCTGAGCTGCACCTTAAGGAAAAGGC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTAGACAGCAAAGCTGCTaGCACAGGGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVRQQSC*HRGSPL
Trigger: AAGGGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTAGAAGACAGCAAAGCTaGTGCCACAGGGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVRRQQS*CHRGSP
Trigger: GGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCTTCT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCAATGTCATGCAAGGTaGGCAAGCCAGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVQCHAR*ASQPGG
Trigger: CCCTCCAGGCTGGCTTGCGCACCTTGCATGACATTG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTCAGGCCCAATGTCATaGAAGGTGCGCAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVSGPMS*KVRKPA
Trigger: GGCTGGCTTGCGCACCTTGCATGACATTGGGCCTGA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGCAGGCTGGGCTCACTaGAGTACTCGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVAGWAH*STRLLH
Trigger: GTGAAGAAGCCGAGTACTGCAGTGAGCCCAGCCTGC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGCTCAAGCCTGCCACTaGCAATGCCTGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPAQACH*QCLMMN
Trigger: GTTCATCATCAGGCATTGGCAGTGGCAGGCTTGAGC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGCTCAAGCCTGCCACTaGCAATGCCTGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKAQACH*QCLMMN
Trigger: GTTCATCATCAGGCATTGGCAGTGGCAGGCTTGAGC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGAGGGGGCTCAAGCCTaGCACTGCCAATGCCTGATG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSEGAQA*HCQCLM
Trigger: CATCAGGCATTGGCAGTGGCAGGCTTGAGCCCCCTC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCTCAGACCAGGAGCTaGAGTGGATGGATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVPQTRS*SGWMGS
Trigger: GCTTCCCATCCATCCACTGCAGCTCCTGGTCTGAGG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACCGCTTCCACCAGGCTaGTGGCACTGCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSPLPPG*WHCHGT
Trigger: AGTTCCATGGCAGTGCCAGCAGCCTGGTGGAAGCGG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGACTGAGGATGTTGTCTaGGGCGTTCTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPTEDVV*GVLHLL
Trigger: GAGGAGATGGAGAACGCCGCAGACAACATCCTCAGT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGTGTACCTCGGTGATTaGTATATCAACAATGCTACC +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRVYLGD*YINNAT
Trigger: GGTAGCATTGTTGATATAGCAATCACCGAGGTACAC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGCGGGAGTTCTCCTCTaGACTGTGTACCTCGGTGAT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVAGVLL*TVYLGD
Trigger: ATCACCGAGGTACACAGTGCAGAGGAGAACTCCCGC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219223.2
CDS-3UTR CCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATTGGTGGTTTTCCTCTaGAACGTACATCCTCGTGTT +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLLVVFL*NVHPRV
Trigger: AACACGAGGATGTACGTTCCAGAGGAAAACCACCAA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGGCATGAGCTGGGCGTaGGCTCCCATAGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSGMSWA*APIVGT
Trigger: GGTTCCAACTATGGGAGCCCACGCCCAGCTCATGCC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCATTGGCATTCATGTTaGCATGAGCTGGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVHWHSC*HELGVG
Trigger: GCCCACGCCCAGCTCATGCCAACATGAATGCCAATG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCCACTCGTTCCAGGTTaGAGTTGGTGGCGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVPLVPG*SWWRWS
Trigger: ACTCCAACGCCACCAACTCCAACCTGGAACGAGTGG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTTCTCTCGAAGCTTCTaGAAATCTCCTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLFSRSF*KSPRAL
Trigger: CAAAGCCCGAGGAGATTTCCAGAAGCTTCGAGAGAA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTCCGATGGGCAAGCCTaGCTCCACAGTTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSDGQA*LHSFLP
Trigger: AGGGAGAAAACTGTGGAGCCAGGCTTGCCCATCGGA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACAGAGAAGAGCAGAAGACAGCAGAAGAGCTGGGTGGAACACGTCCTGACCTCGGCAGCAGGGAGGCAATaGAGCGCACTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: TEKSRRQQKSWVEHVLTSAAGRQ*SALSSA
Trigger: TGCTGAACTCAGTGCGCTCCATTGCCTCCCTGCTGC...CGAGGTCAGGACGTGTTCCACCCAGCTCTTCTGCTGTCTTCTGCTCTTCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTCTTCCTCCTCCTTTTaGGCTGAGGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSSSSF*AEVRLS
Trigger: GGAGAGCCTGACCTCAGCCCAAAAGGAGGAGGAAGA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSLGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTCTTTTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPVSFLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAAAAGAAAC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTATCCTCGTTTTCACTaGGCTGGAGGTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQYPRFH*AGGHPC
Trigger: ACATGGATGACCTCCAGCCCAGTGAAAACGAGGATA...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACTGCAGTGTCTGGGTTaGAGTGGGGACTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKLQCLG*SGDSYP
Trigger: AGGATAAGAGTCCCCACTCCAACCCAGACACTGCAG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGCGGAACCTGTTGTTTaGGCTGAAGATGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLAEPVV*AEDEKC
Trigger: GCATTTTTCATCTTCAGCCCAAACAACAGGTTCCGC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATCATTGACAATACGGTaGCACTGCAGGCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKSLTIR*HCRRNL
Trigger: CAGGTTCCGCCTGCAGTGCCACCGTATTGTCAATGA...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTCATTGACAATACGGTaGCACTGCAGGCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPSLTIR*HCRRNL
Trigger: CAGGTTCCGCCTGCAGTGCCACCGTATTGTCAATGA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVLCGSQ*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATTGACTCCCACACAG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATCCACACATTGTCTCTaGTTCTTGTCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLASTHCL*FLSSSQ
Trigger: CTGTGAGCTGGACAAGAACCAGAGACAATGTGTGGA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATACCACACTTTGTACTaGTGCTGGTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAYHTLY*CWFLGM
Trigger: CATCCCCAAGAACCAGCACCAGTACAAAGTGTGGTA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTTGGGTATGTTCAGCTaGATTAGTCTCACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGLGMFS*ISLTEN
Trigger: ATTCTCAGTGAGACTAATCCAGCTGAACATACCCAA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGGCACACTTCTTGCCTaGCATGCAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVGTLLA*HAGQHD
Trigger: ATCATGCTGGCCTGCATGCCAGGCAAGAAGTGTGCC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTTTCCCAAAACCCAGTaGGGGCTGAATTCGACGGAG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPFPKTQ*GLNSTE
Trigger: CTCCGTCGAATTCAGCCCCCACTGGGTTTTGGGAAA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATCAGAGGCATGTTCATaGACACCAGGCGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKSEACS*TPGVCR
Trigger: CCTGCAAACGCCTGGTGTCCATGAACATGCCTCTGA...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGTGCGCAAGCCAGCCTaGAGGGACAGTGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVVRKPA*RDSAFL
Trigger: AAGGAATGCACTGTCCCTCCAGGCTGGCTTGCGCAC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCTTGTTGATGTGCAGTaGGCGCTGGGTGGCGAACGT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLVDVQ*ALGGER
Trigger: ACGTTCGCCACCCAGCGCCCACTGCACATCAACAAG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGACTCAGTGTCAGCTTaGTTGTTCCCTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLDSVSA*LFPVLL
Trigger: CAACAAGACAGGGAACAACCAAGCTGACACTGAGTC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGACTCAGTGTCAGCTTaGTTGTTCCCTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLADSVSA*LFPVLL
Trigger: CAACAAGACAGGGAACAACCAAGCTGACACTGAGTC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTCCACCAGCTTCTCATaGGACGGTGACTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPSTSFS*DGDSVS
Trigger: TGACACTGAGTCACCGTCCCATGAGAAGCTGGTGGA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATGGCATTGGAGCCCGTaGATGAGTAGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSWHWSP*MSSCWG
Trigger: CCCCCAGCAGCTACTCATCCACGGGCTCCAATGCCA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCTCTTGTCCTCCTCTaGGCAGGTCAGTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVPLVLL*AGQLSV
Trigger: CACCGACAACTGACCTGCCCAGAGGAGGACAAGAGG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAAATGTGGTAGGAGAATaGCTTCTCTGCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKNVVGE*LLCRRG
Trigger: CCCCCTCCTGCAGAGAAGCCATTCTCCTACCACATT...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGAATGTGGTAGGAGAATaGCTTCTCTGCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPNVVGE*LLCRRG
Trigger: CCCCCTCCTGCAGAGAAGCCATTCTCCTACCACATT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTCTGCCCCGGCTGCCTaGAGTGACAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWSAPAA*SDRGCG
Trigger: CCCACACCCCCTGTCACTCCAGGCAGCCGGGGCAGA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATCTGCCCCGGCTGCCTaGAGTGACAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQSAPAA*SDRGCG
Trigger: CCCACACCCCCTGTCACTCCAGGCAGCCGGGGCAGA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AAAGGCTACTTCAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTTCTGCCCCGGCTGCCTaGAGTGACAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: KGYFSFLGTRRKQSVGMASAPAA*SDRGCG
Trigger: CCCACACCCCCTGTCACTCCAGGCAGCCGGGGCAGA...AGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCTGCTGGCACTGCCATaGAACTGTCTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLLALP*NCLPGA
Trigger: AGCTCCAGGGAGACAGTTCCATGGCAGTGCCAGCAG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGCGTCAGCCAGCTCCTaGGTGGTGACCTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSASASS*VVTSMN
Trigger: GTTCATCGAGGTCACCACCCAGGAGCTGGCTGACGC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAACCGTTGGGGCTCTGCTaGGCGCCCCCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQPLGLC*APPLRM
Trigger: CATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGG...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AAACACAAGATATGCAAAATGGCACCTCCCCTCTCTCTGGAAAGCAGAGTGAGGCCGTTGGGGCTCTGCTaGGCGCCCCCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: KHKICKMAPPLSLESRVRPLGLC*APPLRM
Trigger: CATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGG...CCTCACTCTGCTTTCCAGAGAGAGGGGAGGTGCCATTTTGCATATCTTGTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGATAGAGGGAGAGCATTaGGTATGTTCAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQIEGEH*VCSAGC
Trigger: ACACCCAGCTGAACATACCCAATGCTCTCCCTCTAT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGCTGGTATGGGGGTGTaGATGGCTGAACAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVAGMGV*MAEQRP
Trigger: GGGCCTTTGTTCAGCCATCCACACCCCCATACCAGC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
3UTR CAA 72 bp CAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTaGGCAGACACAGTGGAGGGGCATCCCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QAPPTTSPLANS*ADTVEGHPRAR
Trigger: CCTGGCCCTGGGATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTGCCAGCACTGCCCATaGGCTTGGCCTGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTCQHCP*AWPAGR
Trigger: CCGCCCGGCAGGCCAAGCTCATGGGCAGTGCTGGCA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGGAGCATTTCTGCAGTaGAAAGGGCCAGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVGAFLQ*KGPGGL
Trigger: AAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATGCCCAGGGGAGACATaGTCTTCGTCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSCPGET*SSSPPG
Trigger: TCCTGGTGGAGACGAAGATCATGTCTCCCCTGGGCA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGCAAGGGTCGGGCCTTaGGGGCATATTCCACACATT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVARVGP*GHIPHI
Trigger: AATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCAGCTTCACCAGGCGCATaGCCCGGAAGAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPASPGA*PGRGGR
Trigger: TCTTCCGCCTCTTCCGGGTCATGCGCCTGGTGAAGC...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCAGTTGTTGTTCCGATTaGTCTCTGTGGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLSCCSD*SLWCHS
Trigger: TGAATGACACCACAGAGATCAATCGGAACAACAACT...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTTGAATTCATCCAGGTaGTGGGGACCGAGGATAGAC +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPLNSSR*WGPRID
Trigger: GTCTATCCTCGGTCCCCATCACCTGGATGAATTCAA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCTTCTCATGGGACGGTaGCTCAGTGTCAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVLLMGR*LSVSLV
Trigger: AACCAAGCTGACACTGAGTCACCGTCCCATGAGAAG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCCTGGCTGGGCACGGTaGGGGAGACGGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPPGWAR*GRRAGL
Trigger: GAGCCCGGCCCGTCTCCCTCACCGTGCCCAGCCAGG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCTGTCCCAGTCCTTCTaGAATCAAGACCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVLSQSF*NQDRFH
Trigger: GTGGAAGCGGTCTTGATTTCAGAAGGACTGGGACAG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGAAATGTAGAAACAGTTaGGTTGAGCTTCATGTACCA +
Preference number: 4 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGKCRNS*VELHVP
Trigger: TGGTACATGAAGCTCAACTCAACTGTTTCTACATTT...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTTGGGTTTCCCATACTaGTGCCGCTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLGFPY*CRFRCV
Trigger: CACACAGCGGAAGCGGCAGCAGTATGGGAAACCCAA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTACAAGAAGGGCAATGTaGAGCAGAGGCACCATGGCC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVTRRAM*SRGTMA
Trigger: GGCCATGGTGCCTCTGCTGCACATTGCCCTTCTTGT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACCGGAACATCTATTATaGCCTCCTGGTTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKPEHLL*PPGCSR
Trigger: CCTGCTACAACCAGGAGGGCATAATAGATGTTCCGG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTCTTCTTCTAGTTGCTaGTTCTCTCGAAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLSSSSC*FSRSFW
Trigger: CCAGAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATCTTCTTCTAGTTGCTaGTTCTCTCGAAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLASSSSC*FSRSFW
Trigger: CCAGAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAAGATCTTCTTCTAGTTaGTGCTTCTCTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLRSSSS*CFSRSF
Trigger: GAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGATCT...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCAGATCTTCTTCTAGTTaGTGCTTCTCTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLRSSSS*CFSRSF
Trigger: GAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGATCT...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGGGGTCAATGTCTTCTaGCTGGGTGATCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVGVNVF*LGDPVQ
Trigger: CTGGACTGGATCACCCAGGCAGAAGACATTGACCCC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ACAGAGAAGAGCAGAAGACAGCAGAAGAGCTGGGTGGAACACGTCCTGACCTCGTTCCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TEKSRRQQKSWVEHVLTSFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGGAA...CGAGGTCAGGACGTGTTCCACCCAGCTCTTCTGCTGTCTTCTGCTCTTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGGAAGTTATCGAACGTaGTCCTACGGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPGSYRT*SYGSAS
Trigger: AGATGCAGACCCGTAGGAGCACGTTCGATAACTTCC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACAATTTTCTCCTCTTTaGTCTCCTCCACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKQFSPL*SPPRLA
Trigger: AGCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCAATTTTCTCCTCTTTaGTCTCCTCCACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPQFSPL*SPPRLA
Trigger: AGCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGCCTTTTCCTTAAGGTaGAGCTCAGACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSAFSLR*SSDRGR
Trigger: CCGGCCCCTGTCTGAGCTGCACCTTAAGGAAAAGGC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTTCCGGCATGGGAACTaGCTTTTCCTTAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPFRHGN*LFLKVQ
Trigger: CTGCACCTTAAGGAAAAGGCAGTTCCCATGCCGGAA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGCTGAAGATGAAAAATaGACTGGCTTCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPAEDEK*TGFRHG
Trigger: CCCATGCCGGAAGCCAGTGCATTTTTCATCTTCAGC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGCTGAAGATGAAAAATaGACTGGCTTCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKAEDEK*TGFRHG
Trigger: CCCATGCCGGAAGCCAGTGCATTTTTCATCTTCAGC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATTCCTGAAGGAGGTGTaGTGGACGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSFLKEV*WTGSSA
Trigger: TGCTGAGGACCCCGTCCAGCACACCTCCTTCAGGAA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTGTCAAAGTCAAACTTaGTGTTCTCCCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQCQSQT*CSPSFE
Trigger: CTCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACA...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAAGAAGACAGCAAAGCTaGTGCCACAGGGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSRRQQS*CHRGSP
Trigger: GGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCTTCT...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACAATGTCATGCAAGGTaGGCAAGCCAGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSQCHAR*ASQPGG
Trigger: CCCTCCAGGCTGGCTTGCGCACCTTGCATGACATTG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGAGGAAAGTTGCCCCTaGTGTCACTCTGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKEESCP*CHSDSR
Trigger: CCTACTATCAGAGTGACAGCAGGGGCAACTTTCCTC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGACGTCTGAGGAAAGTTaGCCCTGCTGTCACTCTGAT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPTSEES*PCCHSD
Trigger: ATCAGAGTGACAGCAGGGGCAACTTTCCTCAGACGT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACTGAGGATGTTGTCTaGGGCGTTCTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVTEDVV*GVLHLL
Trigger: GAGGAGATGGAGAACGCCGCAGACAACATCCTCAGT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCATTGGCATTCATGTTaGCATGAGCTGGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVHWHSC*HELGVG
Trigger: GCCCACGCCCAGCTCATGCCAACATGAATGCCAATG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGCCGGGCGGCATCGATaGCTGCCTGCCAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLAGRHR*LPARTV
Trigger: CACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTGGAGTTGGTGGCGTTaGAGTCGTCTTCCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVWSWWR*SRLPER
Trigger: CCTTTCCGGAAGACGACTCCAACGCCACCAACTCCA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTGGCCCCATCAGCTTTaGTTGCTTGTTCTAAAATTG +
Preference number: 4 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLWPHQL*LLVLKL
Trigger: CAATTTTAGAACAAGCAACCAAAGCTGATGGGGCCA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCTTTCTCCCTCTCTTTaGAAAACTCCCCGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQLSPSL*KTPRSK
Trigger: TTTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGAATCTCCTCGGGCTTTaGCTTTCTCCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPNLLGL*LSPSLW
Trigger: CCAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACCAGGAGGGCTTTATTaGCTGTGTCTTGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKPGGLY*LCLALL
Trigger: CAGAAGTGCAAGACACAGCCAATAAAGCCCTCCTGG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTCTTCCTCCTCCTTTTaGGCTGAGGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVSSSSF*AEVRLS
Trigger: GGAGAGCCTGACCTCAGCCCAAAAGGAGGAGGAAGA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGTGTCTGGGTTGGAGTaGGGACTCTTATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKVSGLE*GLLSSF
Trigger: AAACGAGGATAAGAGTCCCCACTCCAACCCAGACAC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCTGCAGTGTCTGGGTTaGAGTGGGGACTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVLQCLG*SGDSYP
Trigger: AGGATAAGAGTCCCCACTCCAACCCAGACACTGCAG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCGGAACCTGTTGTTTaGGCTGAAGATGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAAEPVV*AEDEKC
Trigger: GCATTTTTCATCTTCAGCCCAAACAACAGGTTCCGC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTCATTGACAATACGGTaGCACTGCAGGCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSLTIR*HCRRNL
Trigger: CAGGTTCCGCCTGCAGTGCCACCGTATTGTCAATGA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTTGATCGCGCTGGACTaGATGCCAAAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVLIALD*MPKEMR
Trigger: CCTCATCTCCTTTGGCATCCAGTCCAGCGCGATCAA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLCGSQ*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATTGACTCCCACACAG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCCCTTGTCTTCTGTGTaGGAGTCAATGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVPLSSV*ESMERY
Trigger: GTACCGCTCCATTGACTCCCACACAGAAGACAAGGG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGACTTTGTACTGGTGCTaGTTCTTGGGGATGTACCTT +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQTLYWC*FLGMYL
Trigger: AAGGTACATCCCCAAGAACCAGCACCAGTACAAAGT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAACTTTGTACTGGTGCTaGTTCTTGGGGATGTACCTT +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLATLYWC*FLGMYL
Trigger: AAGGTACATCCCCAAGAACCAGCACCAGTACAAAGT...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTTGGGTATGTTCAGCTaGATTAGTCTCACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLGMFS*ISLTEN
Trigger: ATTCTCAGTGAGACTAATCCAGCTGAACATACCCAA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTTTCCCAAAACCCAGTaGGGGCTGAATTCGACGGAG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVFPKTQ*GLNSTE
Trigger: CTCCGTCGAATTCAGCCCCCACTGGGTTTTGGGAAA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTCAGAGGCATGTTCATaGACACCAGGCGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSEACS*TPGVCR
Trigger: CCTGCAAACGCCTGGTGTCCATGAACATGCCTCTGA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACCTCTTGTCCTCCTCTaGGCAGGTCAGTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSPLVLL*AGQLSV
Trigger: CACCGACAACTGACCTGCCCAGAGGAGGACAAGAGG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGCTGCAGTGGATGGATaGGAAGCTGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKAAVDG*EAAVEF
Trigger: AAACTCAACAGCAGCTTCCCATCCATCCACTGCAGC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAGCAGCTCTCGTCCTCTaGGGCCACAGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQAALVL*GHSPVL
Trigger: CAGGACAGGGCTGTGGCCCCAGAGGACGAGAGCTGC...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGCTGGTATGGGGGTGTaGATGGCTGAACAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSAGMGV*MAEQRP
Trigger: GGGCCTTTGTTCAGCCATCCACACCCCCATACCAGC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCGGAGAGTGGCTGGTATaGGGGTGTGGATGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFGEWLV*GCGWLN
Trigger: GTTCAGCCATCCACACCCCCATACCAGCCACTCTCC...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGGAGAGTGGCTGGTATaGGGGTGTGGATGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSGEWLV*GCGWLN
Trigger: GTTCAGCCATCCACACCCCCATACCAGCCACTCTCC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCCACGTTTTCAGTGTTaGCAGACTCAGTCTCACTTG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPPRFQC*QTQSHL
Trigger: CAAGTGAGACTGAGTCTGTCAACACTGAAAACGTGG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTGTCTTGCACTTCTGTaGGCCAGTGAGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVCLALL*ASEAGC
Trigger: ACAACCAGCCTCACTGGCTCACAGAAGTGCAAGACA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGGAGCATTTCTGCAGTaGAAAGGGCCAGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSGAFLQ*KGPGGL
Trigger: AAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGGATCTGAAACACAGTaGGGAGAGACTGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVGSETQ*GETAGS
Trigger: ACTTCCCGCAGTCTCTCCTCACTGTGTTTCAGATCC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGCAGGTCCAGGATATTaGAGTAGTTTCGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKAGPGY*SSFGRK
Trigger: CTTTCTGCCGAAACTACTTCAATATCCTGGACCTGC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CTCCCAACTATGGCTGTCTGTGTTTGGGCTAATCATGGGTCAAAGGTGAGTCTATGGCCCTCAGGGGTCTaGGGACTCGCAGCACTCGTA +
Preference number: 4 (lower is better)
Translates to: LPTMAVCVWANHGSKVSLWPSGV*GLAALV
Trigger: TACGAGTGCTGCGAGTCCTCAGACCCCTGAGGGCCA...TAGACTCACCTTTGACCCATGATTAGCCCAAACACAGACAGCCATAGTTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTGGCCCTCAGGGGTCTaGGGACTCGCAGCACTCGTA +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWWPSGV*GLAALV
Trigger: TACGAGTGCTGCGAGTCCTCAGACCCCTGAGGGCCA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACTGCAGCAGAGTGGTaGCAATTACGATGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVTAAEW*QLRCSR
Trigger: TCGGGAACATCGTAATTGTCACCACTCTGCTGCAGT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTATAGAGCTTTCCCTTaGAGAGCTGGACCCCAATGC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVYRAFP*RAGPQC
Trigger: GCATTGGGGTCCAGCTCTTCAAGGGAAAGCTCTATA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATATTCATGGCGATTTTaGAGAGGCAGCTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKYSWRF*RGSSGH
Trigger: ATGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATA...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAGCTTCACCAGGCGCATaGCCCGGAAGAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQASPGA*PGRGGR
Trigger: TCTTCCGCCTCTTCCGGGTCATGCGCCTGGTGAAGC...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGAGTTGTTGTTCCGATTaGTCTCTGTGGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQSCCSD*SLWCHS
Trigger: TGAATGACACCACAGAGATCAATCGGAACAACAACT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAAGTTGTTGTTCCGATTaGTCTCTGTGGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLASCCSD*SLWCHS
Trigger: TGAATGACACCACAGAGATCAATCGGAACAACAACT...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCACAGTGCATTCCTTTGTaGGGGCTTGCCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPQCIPL*GLAHQP
Trigger: GGGCTGGTGGGCAAGCCCTCACAAAGGAATGCACTG...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCACTCTGATAGTAGGTaGCATGGTTGCCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVHSDSR*HGCRTG
Trigger: GCCTGTTCGGCAACCATGTCACCTACTATCAGAGTG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCTTCTCATGGGACGGTaGCTCAGTGTCAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLLMGR*LSVSLV
Trigger: AACCAAGCTGACACTGAGTCACCGTCCCATGAGAAG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCCCGGCTGCCTGGAGTaGCAGGGGGTGTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPPGCLE*QGVWGT
Trigger: CGTGCCCCACACCCCCTGTCACTCCAGGCAGCCGGG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCTCGGGAGCAAGTCCTaGAGCTGCATTGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLGSKS*SCIGIH
Trigger: ATGAATGCCAATGCAGCTGCAGGACTTGCTCCCGAG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGCCCATGAGCTTGGCCTaGCGGGCGGCATCGATGGCT +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQPMSLA*RAASMA
Trigger: AGCCATCGATGCCGCCCGGCAGGCCAAGCTCATGGG...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078320.14
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATTGGGTTTCCCATACTaGTGCCGCTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSLGFPY*CRFRCV
Trigger: CACACAGCGGAAGCGGCAGCAGTATGGGAAACCCAA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCCGGAACATCTATTATaGCCTCCTGGTTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVPEHLL*PPGCSR
Trigger: CCTGCTACAACCAGGAGGGCATAATAGATGTTCCGG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCAAAGTTGGTGATGCCGTaGTTGGGCCCATCCCACCCG +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPKLVMP*LGPSHP
Trigger: CGGGTGGGATGGGCCCAAGCACGGCATCACCAACTT...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGGGGTCAATGTCTTCTaGCTGGGTGATCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSGVNVF*LGDPVQ
Trigger: CTGGACTGGATCACCCAGGCAGAAGACATTGACCCC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTCTCACTTGTGGGCATaGTCATGTTTCGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPSHLWA*SCFEAC
Trigger: ACAAGCCTCGAAACATGAGCATGCCCACAAGTGAGA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAAGGATGCCACAAGGTTaGTCAAGGAATTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKRMPQG*SRNSST
Trigger: GGTACTGGAATTCCTTGAGCAACCTTGTGGCATCCT...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATTCCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGGAA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACAGTGAGGAGAGACTaGGGGAAGTTATCGAACGTG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVTVRRD*GKLSNV
Trigger: CACGTTCGATAACTTCCCGCAGTCTCTCCTCACTGT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTTCATCCTCTTCCCCTaGAGTGTCTGGGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVFILFP*SVWVGV
Trigger: CACTCCAACCCAGACACTGCAGGGGAAGAGGATGAA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGCTGAAGATGAAAAATaGACTGGCTTCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVAEDEK*TGFRHG
Trigger: CCCATGCCGGAAGCCAGTGCATTTTTCATCTTCAGC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGCGGGAGTTCTCCTCTaGACTCATAGAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSAGVLL*THRGRA
Trigger: TGCTCTCCCTCTATGAGTGCAGAGGAGAACTCCCGC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGGACCTCGTCATCGCCTaGAGGGGGCACCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQDLVIA*RGHHLV
Trigger: GACCAGGTGGTGCCCCCTGCAGGCGATGACGAGGTC...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGGACCTCGTCATCGCCTaGAGGGGGCACCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEDLVIA*RGHHLV
Trigger: GACCAGGTGGTGCCCCCTGCAGGCGATGACGAGGTC...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACGTCTGAGGAAAGTTaGCCCTGCTGTCACTCTGAT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVTSEES*PCCHSD
Trigger: ATCAGAGTGACAGCAGGGGCAACTTTCCTCAGACGT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCAGAGGGGGCTCAAGCCTaGCACTGCCAATGCCTGATG +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPEGAQA*HCQCLM
Trigger: CATCAGGCATTGGCAGTGGCAGGCTTGAGCCCCCTC...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGCCAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTTGGCAGACACAGTGCCGCTTCCACCAGGCTaGTGGCACTGCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: SQAPPTTSPLANSLADTVPLPPG*WHCHGT
Trigger: AGTTCCATGGCAGTGCCAGCAGCCTGGTGGAAGCGG...CACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTTGCTATATCAACAATaGTACCCACAACAATCAAGG +
Preference number: 4 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLLYQQ*YPQQSR
Trigger: CCTTGATTGTTGTGGGTAGCATTGTTGATATAGCAA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGTGTACCTCGGTGATTaGTATATCAACAATGCTACC +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQVYLGD*YINNAT
Trigger: GGTAGCATTGTTGATATAGCAATCACCGAGGTACAC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACATTGGCATTCATGTTaGCATGAGCTGGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSHWHSC*HELGVG
Trigger: GCCCACGCCCAGCTCATGCCAACATGAATGCCAATG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGCCGGGCGGCATCGATaGCTGCCTGCCAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTAGRHR*LPARTV
Trigger: CACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTGGCCCCATCAGCTTTaGTTGCTTGTTCTAAAATTG +
Preference number: 4 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQWPHQL*LLVLKL
Trigger: CAATTTTAGAACAAGCAACCAAAGCTGATGGGGCCA...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTAATCTCCTCGGGCTTTaGCTTTCTCCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVNLLGL*LSPSLW
Trigger: CCAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTTCTCTCGAAGCTTCTaGAAATCTCCTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPFSRSF*KSPRAL
Trigger: CAAAGCCCGAGGAGATTTCCAGAAGCTTCGAGAGAA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGACTCAGTCTCACTTGTaGGCATGCTCATGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPTQSHL*ACSCFE
Trigger: CTCGAAACATGAGCATGCCCACAAGTGAGACTGAGT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATCCGATGGGCAAGCCTaGCTCCACAGTTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSSDGQA*LHSFLP
Trigger: AGGGAGAAAACTGTGGAGCCAGGCTTGCCCATCGGA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCCAGGAGGGCTTTATTaGCTGTGTCTTGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVPGGLY*LCLALL
Trigger: CAGAAGTGCAAGACACAGCCAATAAAGCCCTCCTGG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTATCCTCGTTTTCACTaGGCTGGAGGTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPYPRFH*AGGHPC
Trigger: ACATGGATGACCTCCAGCCCAGTGAAAACGAGGATA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCTGCAGTGTCTGGGTTaGAGTGGGGACTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLQCLG*SGDSYP
Trigger: AGGATAAGAGTCCCCACTCCAACCCAGACACTGCAG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTCATTGACAATACGGTaGCACTGCAGGCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVSLTIR*HCRRNL
Trigger: CAGGTTCCGCCTGCAGTGCCACCGTATTGTCAATGA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTTGATCGCGCTGGACTaGATGCCAAAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLIALD*MPKEMR
Trigger: CCTCATCTCCTTTGGCATCCAGTCCAGCGCGATCAA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCCTTGTCTTCTGTGTaGGAGTCAATGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVPLSSV*ESMERY
Trigger: GTACCGCTCCATTGACTCCCACACAGAAGACAAGGG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTCCACACATTGTCTCTaGTTCTTGTCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPSTHCL*FLSSSQ
Trigger: CTGTGAGCTGGACAAGAACCAGAGACAATGTGTGGA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTACCACACTTTGTACTaGTGCTGGTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPYHTLY*CWFLGM
Trigger: CATCCCCAAGAACCAGCACCAGTACAAAGTGTGGTA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATACCACACTTTGTACTaGTGCTGGTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKYHTLY*CWFLGM
Trigger: CATCCCCAAGAACCAGCACCAGTACAAAGTGTGGTA...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTTTCCCAAAACCCAGTaGGGGCTGAATTCGACGGAG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVFPKTQ*GLNSTE
Trigger: CTCCGTCGAATTCAGCCCCCACTGGGTTTTGGGAAA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATCAGATCCCCAGAGATaGCCCGCCGGATCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQSDPQR*PAGSQA
Trigger: GGCCTGAGATCCGGCGGGCCATCTCTGGGGATCTGA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGACTCAGTGTCAGCTTaGTTGTTCCCTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKDSVSA*LFPVLL
Trigger: CAACAAGACAGGGAACAACCAAGCTGACACTGAGTC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGACTCAGTGTCAGCTTaGTTGTTCCCTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPDSVSA*LFPVLL
Trigger: CAACAAGACAGGGAACAACCAAGCTGACACTGAGTC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTAATGTGGTAGGAGAATaGCTTCTCTGCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVNVVGE*LLCRRG
Trigger: CCCCCTCCTGCAGAGAAGCCATTCTCCTACCACATT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCAGCGTCAGCCAGCTCCTaGGTGGTGACCTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPASASS*VVTSMN
Trigger: GTTCATCGAGGTCACCACCCAGGAGCTGGCTGACGC...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCCGTTGGGGCTCTGCTaGGCGCCCCCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTPLGLC*APPLRM
Trigger: CATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGGCAGCTCTCGTCCTCTaGGGCCACAGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEAALVL*GHSPVL
Trigger: CAGGACAGGGCTGTGGCCCCAGAGGACGAGAGCTGC...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAACTCAGTCTCACTTGTaGGCATGCTCACATGGGTTT +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKTQSHL*ACSHGF
Trigger: AAACCCATGTGAGCATGCCCACAAGTGAGACTGAGT...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000112825.9
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGATAGAGGGAGAGCATTaGGTATGTTCAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPIEGEH*VCSAGC
Trigger: ACACCCAGCTGAACATACCCAATGCTCTCCCTCTAT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGTGGGCTCCCATAGTTaGAACCTCCAGGAGAAATGT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVVGSHS*NLQEKC
Trigger: ACATTTCTCCTGGAGGTTCCAACTATGGGAGCCCAC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
CDS-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTGCCAGCACTGCCCATaGGCTTGGCCTGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPCQHCP*AWPAGR
Trigger: CCGCCCGGCAGGCCAAGCTCATGGGCAGTGCTGGCA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGAGTCCAGGTAGCCTTTaGGATCTTCTTCTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPSPGSL*DLLLVA
Trigger: AGCAACTAGAAGAAGATCTCAAAGGCTACCTGGACT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCCACGTTTTCAGTGTTaGCAGACTCAGTCTCACTTG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVPRFQC*QTQSHL
Trigger: CAAGTGAGACTGAGTCTGTCAACACTGAAAACGTGG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATGCGCCAGTAGCGGCTaGATTTGGATTTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSCASSG*IWIWRS
Trigger: GGATCTCCAAATCCAAATTCAGCCGCTACTGGCGCA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGCATCTCATCGAAATTaGACTTCCCTCCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKASHRN*TSLQRA
Trigger: AGCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGCAGGTCCAGGATATTaGAGTAGTTTCGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVAGPGY*SSFGRK
Trigger: CTTTCTGCCGAAACTACTTCAATATCCTGGACCTGC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTACTGCAGCAGAGTGGTaGCAATTACGATGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVTAAEW*QLRCSR
Trigger: TCGGGAACATCGTAATTGTCACCACTCTGCTGCAGT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTATAGAGCTTTCCCTTaGAGAGCTGGACCCCAATGC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVYRAFP*RAGPQC
Trigger: GCATTGGGGTCCAGCTCTTCAAGGGAAAGCTCTATA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGCTTCACCAGGCGCATaGCCCGGAAGAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLASPGA*PGRGGR
Trigger: TCTTCCGCCTCTTCCGGGTCATGCGCCTGGTGAAGC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGGCTTCACCAGGCGCATaGCCCGGAAGAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEASPGA*PGRGGR
Trigger: TCTTCCGCCTCTTCCGGGTCATGCGCCTGGTGAAGC...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTTGAATTCATCCAGGTaGTGGGGACCGAGGATAGAC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLNSSR*WGPRID
Trigger: GTCTATCCTCGGTCCCCATCACCTGGATGAATTCAA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGAAACCCAGTGGGGGCTaGATTCGACGGAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWKPSGG*IRRRRV
Trigger: GACCCTCCTCCGTCGAATTCAGCCCCCACTGGGTTT...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAAACCCAGTGGGGGCTaGATTCGACGGAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQKPSGG*IRRRRV
Trigger: GACCCTCCTCCGTCGAATTCAGCCCCCACTGGGTTT...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGCAGTGCATTCCTTTGTaGGGGCTTGCCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWQCIPL*GLAHQP
Trigger: GGGCTGGTGGGCAAGCCCTCACAAAGGAATGCACTG...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGGGCCTCCAGCCCTCCTaGAGATGTCATCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWGLQPS*RCHLRR
Trigger: CCTCCGAAGATGACATCTTCAGGAGGGCTGGAGGCC...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAGGCCTCCAGCCCTCCTaGAGATGTCATCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQGLQPS*RCHLRR
Trigger: CCTCCGAAGATGACATCTTCAGGAGGGCTGGAGGCC...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCCACTCTGATAGTAGGTaGCATGGTTGCCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFHSDSR*HGCRTG
Trigger: GCCTGTTCGGCAACCATGTCACCTACTATCAGAGTG...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACACTCTGATAGTAGGTaGCATGGTTGCCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSHSDSR*HGCRTG
Trigger: GCCTGTTCGGCAACCATGTCACCTACTATCAGAGTG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCATGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPCSLSC*CAVGAG
Trigger: CCCAGCGCCCACTGCACATCAACAAGACAGGGAACA...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACTTCTCATGGGACGGTaGCTCAGTGTCAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSLLMGR*LSVSLV
Trigger: AACCAAGCTGACACTGAGTCACCGTCCCATGAGAAG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCCTGTCCCAGTCCTTCTaGAATCAAGACCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFLSQSF*NQDRFH
Trigger: GTGGAAGCGGTCTTGATTTCAGAAGGACTGGGACAG...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACTGTCCCAGTCCTTCTaGAATCAAGACCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSLSQSF*NQDRFH
Trigger: GTGGAAGCGGTCTTGATTTCAGAAGGACTGGGACAG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAACAGAATATGGTTCCTaGAGGAGGTGTGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSTEYGS*RRCAGR
Trigger: CCGTCCAGCACACCTCCTTCAGGAACCATATTCTGT...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGGCGGCATCGATGGCTaGCTGCCAGGACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTGGIDG*LPGQCC
Trigger: GCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCCCATGAGCTTGGCCTaGCGGGCGGCATCGATGGCT +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTPMSLA*RAASMA
Trigger: AGCCATCGATGCCGCCCGGCAGGCCAAGCTCATGGG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGCCGTGTGGCGGTTGTaGCCCCCTGCTTCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLAVWRL*PPASWV
Trigger: AACCCAAGAAGCAGGGGGGCACAACCGCCACACGGC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGAACATCTATTATaGCCTCCTGGTTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVPEHLL*PPGCSR
Trigger: CCTGCTACAACCAGGAGGGCATAATAGATGTTCCGG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGAAGTTGGTGATGCCGTaGTTGGGCCCATCCCACCCG +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWKLVMP*LGPSHP
Trigger: CGGGTGGGATGGGCCCAAGCACGGCATCACCAACTT...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGGACTTAACTGCTaGACGGCATTTTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPVGLNC*TAFSSA
Trigger: TGCAGAAGAAAATGCCGTGCAGCAGTTAAGTCCAAC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTAGGATGCCACAAGGTTaGTCAAGGAATTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVRMPQG*SRNSST
Trigger: GGTACTGGAATTCCTTGAGCAACCTTGTGGCATCCT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGGAAGTTATCGAACGTaGTCCTACGGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVGSYRT*SYGSAS
Trigger: AGATGCAGACCCGTAGGAGCACGTTCGATAACTTCC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATTCATCCTCTTCCCCTaGAGTGTCTGGGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSFILFP*SVWVGV
Trigger: CACTCCAACCCAGACACTGCAGGGGAAGAGGATGAA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATGTCAAAGTCAAACTTaGTGTTCTCCCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKCQSQT*CSPSFE
Trigger: CTCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACA...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTTGCCCACCAGCCCCTaGTCTTTTCGCTTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLPTSP*SFRFLN
Trigger: ATTCAAGAAGCGAAAAGAGCAGGGGCTGGTGGGCAA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTACGTCTGAGGAAAGTTaGCCCTGCTGTCACTCTGAT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVTSEES*PCCHSD
Trigger: ATCAGAGTGACAGCAGGGGCAACTTTCCTCAGACGT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCAGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCTCCGGGCCATGCTaGTGCTCCCACTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLLSGPC*CSHYRL
Trigger: CAGCCTGTAGTGGGAGCAGCAGCATGGCCCGGAGAG...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAACTGAGGATGTTGTCTaGGGCGTTCTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSTEDVV*GVLHLL
Trigger: GAGGAGATGGAGAACGCCGCAGACAACATCCTCAGT...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATTGCTATATCAACAATaGTACCCACAACAATCAAGG +
Preference number: 4 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLLLYQQ*YPQQSR
Trigger: CCTTGATTGTTGTGGGTAGCATTGTTGATATAGCAA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGTTCCAGGTTGGAGTTaGTGGCGTTGGAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSVPGWS*WRWSRL
Trigger: AAGACGACTCCAACGCCACCAACTCCAACCTGGAAC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTAATCTCCTCGGGCTTTaGCTTTCTCCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVNLLGL*LSPSLW
Trigger: CCAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTTCTCTCGAAGCTTCTaGAAATCTCCTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVFSRSF*KSPRAL
Trigger: CAAAGCCCGAGGAGATTTCCAGAAGCTTCGAGAGAA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCAGGAGGGCTTTATTaGCTGTGTCTTGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVPGGLY*LCLALL
Trigger: CAGAAGTGCAAGACACAGCCAATAAAGCCCTCCTGG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGCTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWLGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAACTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQLGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGTTTCTTTTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSVSFLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAAAAGAAAC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTATCCTCGTTTTCACTaGGCTGGAGGTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVYPRFH*AGGHPC
Trigger: ACATGGATGACCTCCAGCCCAGTGAAAACGAGGATA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGTGTCTGGGTTGGAGTaGGGACTCTTATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVVSGLE*GLLSSF
Trigger: AAACGAGGATAAGAGTCCCCACTCCAACCCAGACAC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACTGCAGTGTCTGGGTTaGAGTGGGGACTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSLQCLG*SGDSYP
Trigger: AGGATAAGAGTCCCCACTCCAACCCAGACACTGCAG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGCATTGCCTAGGATATaGTTCCTGAAGGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVALPRI*FLKEVC
Trigger: GCACACCTCCTTCAGGAACCATATCCTAGGCAATGC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCTTGATCGCGCTGGACTaGATGCCAAAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFLIALD*MPKEMR
Trigger: CCTCATCTCCTTTGGCATCCAGTCCAGCGCGATCAA...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCACGGTAGTTGTAGATaGGGCCCTTGTCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVHGSCR*GPCLLC
Trigger: ACACAGAAGACAAGGGCCCCATCTACAACTACCGTG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTACCACACTTTGTACTaGTGCTGGTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVYHTLY*CWFLGM
Trigger: CATCCCCAAGAACCAGCACCAGTACAAAGTGTGGTA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATCAGAGGCATGTTCATaGACACCAGGCGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSSEACS*TPGVCR
Trigger: CCTGCAAACGCCTGGTGTCCATGAACATGCCTCTGA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTCAGATCCCCAGAGATaGCCCGCCGGATCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQSDPQR*PAGSQA
Trigger: GGCCTGAGATCCGGCGGGCCATCTCTGGGGATCTGA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCACTTGTTGATGTGCAGTaGGCGCTGGGTGGCGAACGT +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPLVDVQ*ALGGER
Trigger: ACGTTCGCCACCCAGCGCCCACTGCACATCAACAAG...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGACTCAGTGTCAGCTTaGTTGTTCCCTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVDSVSA*LFPVLL
Trigger: CAACAAGACAGGGAACAACCAAGCTGACACTGAGTC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATCCACCAGCTTCTCATaGGACGGTGACTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSSTSFS*DGDSVS
Trigger: TGACACTGAGTCACCGTCCCATGAGAAGCTGGTGGA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAAATGTGGTAGGAGAATaGCTTCTCTGCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSNVVGE*LLCRRG
Trigger: CCCCCTCCTGCAGAGAAGCCATTCTCCTACCACATT...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGCTGCAGTGGATGGATaGGAAGCTGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVAAVDG*EAAVEF
Trigger: AAACTCAACAGCAGCTTCCCATCCATCCACTGCAGC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCAGACCAGGAGCTGCAGTaGATGGATGGGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPDQELQ*MDGKLL
Trigger: CAGCAGCTTCCCATCCATCCACTGCAGCTCCTGGTC...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGGCGTCAGCCAGCTCCTaGGTGGTGACCTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWASASS*VVTSMN
Trigger: GTTCATCGAGGTCACCACCCAGGAGCTGGCTGACGC...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CAA 72 bp TCGAGTGAGAGCCAAGCTCCCCCAACTACTTCTCCATaGGCAAATTCTTTGGCAGACACAGTGGAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SSESQAPPTTSP*ANSLADTVEGH
Trigger: ATGCCCCTCCACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCTCTCACTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CAA 72 bp AGGTGTTCTGGGACACACAGCCACACATTAAACAGGTaGAACATGCTGACCACAGCCCTCCCCTTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: RCSGTHSHTLNR*NMLTTALPFCR
Trigger: CCTACAGAAGGGGAGGGCTGTGGTCAGCATGTTCAACCTGTTTAATGTGTGGCTGTGTGTCCCAGAACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATGCCAGCACTGCCCATaGGCTTGGCCTGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKCQHCP*AWPAGR
Trigger: CCGCCCGGCAGGCCAAGCTCATGGGCAGTGCTGGCA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTAGTCCAGGTAGCCTTTaGGATCTTCTTCTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSPGSL*DLLLVA
Trigger: AGCAACTAGAAGAAGATCTCAAAGGCTACCTGGACT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGCATCTCATCGAAATTaGACTTCCCTCCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVASHRN*TSLQRA
Trigger: AGCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGCAGGTCCAGGATATTaGAGTAGTTTCGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVAGPGY*SSFGRK
Trigger: CTTTCTGCCGAAACTACTTCAATATCCTGGACCTGC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTGGCCCTCAGGGGTCTaGGGACTCGCAGCACTCGTA +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTWPSGV*GLAALV
Trigger: TACGAGTGCTGCGAGTCCTCAGACCCCTGAGGGCCA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATATAGAGCTTTCCCTTaGAGAGCTGGACCCCAATGC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSYRAFP*RAGPQC
Trigger: GCATTGGGGTCCAGCTCTTCAAGGGAAAGCTCTATA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGAGTTGTTGTTCCGATTaGTCTCTGTGGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPSCCSD*SLWCHS
Trigger: TGAATGACACCACAGAGATCAATCGGAACAACAACT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAAGTTGTTGTTCCGATTaGTCTCTGTGGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: SLGPCSIETARLRQNMCKSCCSD*SLWCHS
Trigger: TGAATGACACCACAGAGATCAATCGGAACAACAACT...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATTGCAGGCCACACGGTaGGGACACAATTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSLQATR*GHNFPK
Trigger: TTTTGGGAAATTGTGTCCTCACCGTGTGGCCTGCAA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCAGTGCATTCCTTTGTaGGGGCTTGCCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLQCIPL*GLAHQP
Trigger: GGGCTGGTGGGCAAGCCCTCACAAAGGAATGCACTG...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATTTCAATCACTCAGGGAGAGAGGGGCCATCCTTCTCCTTGGAGATGTCTGAAATGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: ISITQGERGHPSPWRCLKCSLSC*CAVGAG
Trigger: CCCAGCGCCCACTGCACATCAACAAGACAGGGAACA...TTTCAGACATCTCCAAGGAGAAGGATGGCCCCTCTCTCCCTGAGTGATTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQCSLSC*CAVGAG
Trigger: CCCAGCGCCCACTGCACATCAACAAGACAGGGAACA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVMNLGS*ANCPSP
Trigger: AGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCAT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGTACCACCTTGCCCTTaGACTTCCTCTCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSVPPCP*TSSLFP
Trigger: AGGAAACAGAGAGGAAGTTCAAGGGCAAGGTGGTAC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTGCCTGCCAGGACAGTaGTGCCCCTGGAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLCLPGQ*CPWSRD
Trigger: ATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCAACAAGAAGGGCAATGTaGAGCAGAGGCACCATGGCC +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPTRRAM*SRGTMA
Trigger: GGCCATGGTGCCTCTGCTGCACATTGCCCTTCTTGT...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACCGGAACATCTATTATaGCCTCCTGGTTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSPEHLL*PPGCSR
Trigger: CCTGCTACAACCAGGAGGGCATAATAGATGTTCCGG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTCTCACTTGTGGGCATaGTCATGTTTCGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVSHLWA*SCFEAC
Trigger: ACAAGCCTCGAAACATGAGCATGCCCACAAGTGAGA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTAGGATGCCACAAGGTTaGTCAAGGAATTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVRMPQG*SRNSST
Trigger: GGTACTGGAATTCCTTGAGCAACCTTGTGGCATCCT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTCCCAACTATGGCTGTCTGTGTTTGGGCTAATCATGGGTCAAAGGTGAGTCTAGCCTTTTCCTTAAGGTaGAGCTCAGACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LPTMAVCVWANHGSKVSLAFSLR*SSDRGR
Trigger: CCGGCCCCTGTCTGAGCTGCACCTTAAGGAAAAGGC...TAGACTCACCTTTGACCCATGATTAGCCCAAACACAGACAGCCATAGTTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATACTCTTGTTCCCCCTaGTCCTGGAAGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSYSCSP*SWKVTM
Trigger: CATTGTCACCTTCCAGGAGCAGGGGGAACAAGAGTA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGGGGTCTCCCCTTCCGTaGTGTTGCTGGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEGSPLP*CCWAQT
Trigger: AGTCTGAGCCCAGCAACAGCACGGAAGGGGAGACCC...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCTGCCTCCCTGCTTCAGGAGATGGAAAGGATGAATAGTTTTTACAAGGGCTACGGGTCTCCCCTTCCGTaGTGTTGCTGGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: SASLLQEMERMNSFYKGYGSPLP*CCWAQT
Trigger: AGTCTGAGCCCAGCAACAGCACGGAAGGGGAGACCC...GTAGCCCTTGTAAAAACTATTCATCCTTTCCATCTCCTGAAGCAGGGAGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGAGACAGCAAAGCTGCTaGCACAGGGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWRQQSC*HRGSPL
Trigger: AAGGGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCT...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGACAGCAAAGCTGCTaGCACAGGGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQRQQSC*HRGSPL
Trigger: AAGGGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCT...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AAACACAAGATATGCAAAATGGCACCTCCCCTCTCTCTGGAAAGCAGAGTGAGGAGACAGCAAAGCTGCTaGCACAGGGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: KHKICKMAPPLSLESRVRRQQSC*HRGSPL
Trigger: AAGGGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCT...CCTCACTCTGCTTTCCAGAGAGAGGGGAGGTGCCATTTTGCATATCTTGTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGAGAAGACAGCAAAGCTaGTGCCACAGGGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWRRQQS*CHRGSP
Trigger: GGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCTTCT...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATTGCCCACCAGCCCCTaGTCTTTTCGCTTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSLPTSP*SFRFLN
Trigger: ATTCAAGAAGCGAAAAGAGCAGGGGCTGGTGGGCAA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATCCTTTGTGAGGGCTTaGCCACCAGCCCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQSFVRA*PPAPAL
Trigger: AAGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTCCTTTGTGAGGGCTTaGCCACCAGCCCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWSFVRA*PPAPAL
Trigger: AAGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCGAGGAAAGTTGCCCCTaGTGTCACTCTGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFEESCP*CHSDSR
Trigger: CCTACTATCAGAGTGACAGCAGGGGCAACTTTCCTC...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGAGGAAAGTTGCCCCTaGTGTCACTCTGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSEESCP*CHSDSR
Trigger: CCTACTATCAGAGTGACAGCAGGGGCAACTTTCCTC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAACGTCTGAGGAAAGTTaGCCCTGCTGTCACTCTGAT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSTSEES*PCCHSD
Trigger: ATCAGAGTGACAGCAGGGGCAACTTTCCTCAGACGT...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAGCAGGCTGGGCTCACTaGAGTACTCGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQAGWAH*STRLLH
Trigger: GTGAAGAAGCCGAGTACTGCAGTGAGCCCAGCCTGC...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGAGGGGGCTCAAGCCTaGCACTGCCAATGCCTGATG +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLEGAQA*HCQCLM
Trigger: CATCAGGCATTGGCAGTGGCAGGCTTGAGCCCCCTC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGCCTCAGACCAGGAGCTaGAGTGGATGGATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWPQTRS*SGWMGS
Trigger: GCTTCCCATCCATCCACTGCAGCTCCTGGTCTGAGG...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGCCGCTTCCACCAGGCTaGTGGCACTGCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEPLPPG*WHCHGT
Trigger: AGTTCCATGGCAGTGCCAGCAGCCTGGTGGAAGCGG...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATTGCTATATCAACAATaGTACCCACAACAATCAAGG +
Preference number: 4 (lower is better)
Translates to: GGWCDLHWLLPPASQLLALLYQQ*YPQQSR
Trigger: CCTTGATTGTTGTGGGTAGCATTGTTGATATAGCAA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTTGGTGGTTTTCCTCTaGAACGTACATCCTCGTGTT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVLVVFL*NVHPRV
Trigger: AACACGAGGATGTACGTTCCAGAGGAAAACCACCAA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGTCCTGCAGCTGCATTaGCATTCATGTTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSVLQLH*HSCWHE
Trigger: CTCATGCCAACATGAATGCCAATGCAGCTGCAGGAC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTGCCGGGCGGCATCGATaGCTGCCTGCCAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPAGRHR*LPARTV
Trigger: CACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGC...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGCCAGGTTGGAGTTGGTaGCGTTGGAGTCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWPGWSW*RWSRLP
Trigger: CGGAAGACGACTCCAACGCCACCAACTCCAACCTGG...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTGGCCCCATCAGCTTTaGTTGCTTGTTCTAAAATTG +
Preference number: 4 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPWPHQL*LLVLKL
Trigger: CAATTTTAGAACAAGCAACCAAAGCTGATGGGGCCA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTTCTCTCGAAGCTTCTaGAAATCTCCTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVFSRSF*KSPRAL
Trigger: CAAAGCCCGAGGAGATTTCCAGAAGCTTCGAGAGAA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCATCCGATGGGCAAGCCTaGCTCCACAGTTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPSDGQA*LHSFLP
Trigger: AGGGAGAAAACTGTGGAGCCAGGCTTGCCCATCGGA...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCATCTTCCTCCTCCTTTTaGGCTGAGGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPSSSSF*AEVRLS
Trigger: GGAGAGCCTGACCTCAGCCCAAAAGGAGGAGGAAGA...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACAGAGAAGAGCAGAAGACAGCAGAAGAGCTGGGTGGAACACGTCCTGACCTCGTATCCTCGTTTTCACTaGGCTGGAGGTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: TEKSRRQQKSWVEHVLTSYPRFH*AGGHPC
Trigger: ACATGGATGACCTCCAGCCCAGTGAAAACGAGGATA...CGAGGTCAGGACGTGTTCCACCCAGCTCTTCTGCTGTCTTCTGCTCTTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGTGTCTGGGTTGGAGTaGGGACTCTTATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSVSGLE*GLLSSF
Trigger: AAACGAGGATAAGAGTCCCCACTCCAACCCAGACAC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCATTCCCCTGCAGTGTCTaGGTTGGAGTGGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPFPCSV*VGVGTL
Trigger: AAGAGTCCCCACTCCAACCCAGACACTGCAGGGGAA...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGCGGAACCTGTTGTTTaGGCTGAAGATGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVAEPVV*AEDEKC
Trigger: GCATTTTTCATCTTCAGCCCAAACAACAGGTTCCGC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GACCAGGCAGAAAGGGATTTAACTGGACTTGTCTGTTACTTGGACTGTGTCATGGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: DQAERDLTGLVCYLDCVMAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...CATGACACAGTCCAAGTAACAGACAAGTCCAGTTAAATCCCTTTCTGCCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACTTTGTACTGGTGCTaGTTCTTGGGGATGTACCTT +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVTLYWC*FLGMYL
Trigger: AAGGTACATCCCCAAGAACCAGCACCAGTACAAAGT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GACCAGGCAGAAAGGGATTTAACTGGACTTGTCTGTTACTTGGACTGTGTCATGTGGCATTGGAGCCCGTaGATGAGTAGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DQAERDLTGLVCYLDCVMWHWSP*MSSCWG
Trigger: CCCCCAGCAGCTACTCATCCACGGGCTCCAATGCCA...CATGACACAGTCCAAGTAACAGACAAGTCCAGTTAAATCCCTTTCTGCCTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAACCTCTTGTCCTCCTCTaGGCAGGTCAGTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQPLVLL*AGQLSV
Trigger: CACCGACAACTGACCTGCCCAGAGGAGGACAAGAGG...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGCTGCAGTGGATGGATaGGAAGCTGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSAAVDG*EAAVEF
Trigger: AAACTCAACAGCAGCTTCCCATCCATCCACTGCAGC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGGCGTCAGCCAGCTCCTaGGTGGTGACCTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEASASS*VVTSMN
Trigger: GTTCATCGAGGTCACCACCCAGGAGCTGGCTGACGC...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGGCGTCAGCCAGCTCCTaGGTGGTGACCTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQASASS*VVTSMN
Trigger: GTTCATCGAGGTCACCACCCAGGAGCTGGCTGACGC...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCCGTTGGGGCTCTGCTaGGCGCCCCCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPPLGLC*APPLRM
Trigger: CATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTAGTCCAGGTAGCCTTTaGGATCTTCTTCTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVSPGSL*DLLLVA
Trigger: AGCAACTAGAAGAAGATCTCAAAGGCTACCTGGACT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACCACGTTTTCAGTGTTaGCAGACTCAGTCTCACTTG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSPRFQC*QTQSHL
Trigger: CAAGTGAGACTGAGTCTGTCAACACTGAAAACGTGG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTGCCCAGGGGAGACATaGTCTTCGTCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQCPGET*SSSPPG
Trigger: TCCTGGTGGAGACGAAGATCATGTCTCCCCTGGGCA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTCCCCGGTCAGGATCTaGAACACAGTGAGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWSPVRI*NTVRRD
Trigger: GTCTCTCCTCACTGTGTTTCAGATCCTGACCGGGGA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATTTCAATCACTCAGGGAGAGAGGGGCCATCCTTCTCCTTGGAGATGTCTGAAATCCCCGGTCAGGATCTaGAACACAGTGAGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: ISITQGERGHPSPWRCLKSPVRI*NTVRRD
Trigger: GTCTCTCCTCACTGTGTTTCAGATCCTGACCGGGGA...TTTCAGACATCTCCAAGGAGAAGGATGGCCCCTCTCTCCCTGAGTGATTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATCCCCGGTCAGGATCTaGAACACAGTGAGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQSPVRI*NTVRRD
Trigger: GTCTCTCCTCACTGTGTTTCAGATCCTGACCGGGGA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CTCCCAACTATGGCTGTCTGTGTTTGGGCTAATCATGGGTCAAAGGTGAGTCTACTAGGATATGGTTCCTaGAGGAGGTGTGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: LPTMAVCVWANHGSKVSLLGYGS*RRCAGR
Trigger: CCGTCCAGCACACCTCCTTCAGGAACCATATCCTAG...TAGACTCACCTTTGACCCATGATTAGCCCAAACACAGACAGCCATAGTTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGCAGGTCCAGGATATTaGAGTAGTTTCGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSAGPGY*SSFGRK
Trigger: CTTTCTGCCGAAACTACTTCAATATCCTGGACCTGC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATATTCATGGCGATTTTaGAGAGGCAGCTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSYSWRF*RGSSGH
Trigger: ATGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTAGTTGTTGTTCCGATTaGTCTCTGTGGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSCCSD*SLWCHS
Trigger: TGAATGACACCACAGAGATCAATCGGAACAACAACT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCAAACCCAGTGGGGGCTaGATTCGACGGAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTKPSGG*IRRRRV
Trigger: GACCCTCCTCCGTCGAATTCAGCCCCCACTGGGTTT...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCACTTCTCATGGGACGGTaGCTCAGTGTCAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPLLMGR*LSVSLV
Trigger: AACCAAGCTGACACTGAGTCACCGTCCCATGAGAAG...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFMNLGS*ANCPSP
Trigger: AGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCAT...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp CTCCCAACTATGGCTGTCTGTGTTTGGGCTAATCATGGGTCAAAGGTGAGTCTAACAAGAAGGGCAATGTaGAGCAGAGGCACCATGGCC +
Preference number: 4 (lower is better)
Translates to: LPTMAVCVWANHGSKVSLTRRAM*SRGTMA
Trigger: GGCCATGGTGCCTCTGCTGCACATTGCCCTTCTTGT...TAGACTCACCTTTGACCCATGATTAGCCCAAACACAGACAGCCATAGTTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTCTTCTTCTAGTTGCTaGTTCTCTCGAAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVSSSSC*FSRSFW
Trigger: CCAGAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAAGGATGCCACAAGGTTaGTCAAGGAATTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSRMPQG*SRNSST
Trigger: GGTACTGGAATTCCTTGAGCAACCTTGTGGCATCCT...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATTCCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGGAA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGAGACAGCAAAGCTGCTaGCACAGGGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQRQQSC*HRGSPL
Trigger: AAGGGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCT...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGAGACAGCAAAGCTGCTaGCACAGGGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAERQQSC*HRGSPL
Trigger: AAGGGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCT...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGACCTCGTCATCGCCTaGAGGGGGCACCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVDLVIA*RGHHLV
Trigger: GACCAGGTGGTGCCCCCTGCAGGCGATGACGAGGTC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCTGCCTCCCTGCTTCAGGAGATGGAAAGGATGAATAGTTTTTACAAGGGCTACTCCTTTGTGAGGGCTTaGCCACCAGCCCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SASLLQEMERMNSFYKGYSFVRA*PPAPAL
Trigger: AAGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGA...GTAGCCCTTGTAAAAACTATTCATCCTTTCCATCTCCTGAAGCAGGGAGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTCAGGCCCAATGTCATaGAAGGTGCGCAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQSGPMS*KVRKPA
Trigger: GGCTGGCTTGCGCACCTTGCATGACATTGGGCCTGA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTCAGGCCCAATGTCATaGAAGGTGCGCAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLSGPMS*KVRKPA
Trigger: GGCTGGCTTGCGCACCTTGCATGACATTGGGCCTGA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCCTGTCTTGTTGATGTaGAGTGGGCGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTPVLLM*SGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGCAGGCTGGGCTCACTaGAGTACTCGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLAGWAH*STRLLH
Trigger: GTGAAGAAGCCGAGTACTGCAGTGAGCCCAGCCTGC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCAGCTCAAGCCTGCCACTaGCAATGCCTGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPAQACH*QCLMMN
Trigger: GTTCATCATCAGGCATTGGCAGTGGCAGGCTTGAGC...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGCCAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTTGGCAGACACAGTGGCTCAAGCCTGCCACTaGCAATGCCTGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: SQAPPTTSPLANSLADTVAQACH*QCLMMN
Trigger: GTTCATCATCAGGCATTGGCAGTGGCAGGCTTGAGC...CACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCAACTGAGGATGTTGTCTaGGGCGTTCTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPTEDVV*GVLHLL
Trigger: GAGGAGATGGAGAACGCCGCAGACAACATCCTCAGT...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGTGTACCTCGGTGATTaGTATATCAACAATGCTACC +
Preference number: 4 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVVYLGD*YINNAT
Trigger: GGTAGCATTGTTGATATAGCAATCACCGAGGTACAC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGCCACTCGTTCCAGGTTaGAGTTGGTGGCGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWPLVPG*SWWRWS
Trigger: ACTCCAACGCCACCAACTCCAACCTGGAACGAGTGG...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp AAACACAAGATATGCAAAATGGCACCTCCCCTCTCTCTGGAAAGCAGAGTGAGGGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: KHKICKMAPPLSLESRVRGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...CCTCACTCTGCTTTCCAGAGAGAGGGGAGGTGCCATTTTGCATATCTTGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCTTTCTCCCTCTCTTTaGAAAACTCCCCGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLSPSL*KTPRSK
Trigger: TTTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATTCTCTCGAAGCTTCTaGAAATCTCCTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSFSRSF*KSPRAL
Trigger: CAAAGCCCGAGGAGATTTCCAGAAGCTTCGAGAGAA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAACTCAGTCTCACTTGTaGGCATGCTCATGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSTQSHL*ACSCFE
Trigger: CTCGAAACATGAGCATGCCCACAAGTGAGACTGAGT...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTCCGATGGGCAAGCCTaGCTCCACAGTTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWSDGQA*LHSFLP
Trigger: AGGGAGAAAACTGTGGAGCCAGGCTTGCCCATCGGA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGCAGCAGGGAGGCAATaGAGCGCACTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLAAGRQ*SALSSA
Trigger: TGCTGAACTCAGTGCGCTCCATTGCCTCCCTGCTGC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTCTTCCTCCTCCTTTTaGGCTGAGGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWSSSSF*AEVRLS
Trigger: GGAGAGCCTGACCTCAGCCCAAAAGGAGGAGGAAGA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CCTCTAGTTCTCTTGCTGCTGACACCTGTTTCAGAGCTGGGGCTTGTTGAAGAAGTTTCTTTTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PLVLLLLTPVSELGLVEEVSFLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAAAAGAAAC...TTCTTCAACAAGCCCCAGCTCTGAAACAGGTGTCAGCAGCAAGAGAACTAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCACTGCAGTGTCTGGGTTaGAGTGGGGACTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPLQCLG*SGDSYP
Trigger: AGGATAAGAGTCCCCACTCCAACCCAGACACTGCAG...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ACAGAGAAGAGCAGAAGACAGCAGAAGAGCTGGGTGGAACACGTCCTGACCTCGGCGGAACCTGTTGTTTaGGCTGAAGATGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: TEKSRRQQKSWVEHVLTSAEPVV*AEDEKC
Trigger: GCATTTTTCATCTTCAGCCCAAACAACAGGTTCCGC...CGAGGTCAGGACGTGTTCCACCCAGCTCTTCTGCTGTCTTCTGCTCTTCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAACTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQLCGSQ*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATTGACTCCCACACAG...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCACCCTTGTCTTCTGTGTaGGAGTCAATGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPPLSSV*ESMERY
Trigger: GTACCGCTCCATTGACTCCCACACAGAAGACAAGGG...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATCCACACATTGTCTCTaGTTCTTGTCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSSTHCL*FLSSSQ
Trigger: CTGTGAGCTGGACAAGAACCAGAGACAATGTGTGGA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATACCACACTTTGTACTaGTGCTGGTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSYHTLY*CWFLGM
Trigger: CATCCCCAAGAACCAGCACCAGTACAAAGTGTGGTA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AAACACAAGATATGCAAAATGGCACCTCCCCTCTCTCTGGAAAGCAGAGTGAGGGGCACACTTCTTGCCTaGCATGCAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: KHKICKMAPPLSLESRVRGTLLA*HAGQHD
Trigger: ATCATGCTGGCCTGCATGCCAGGCAAGAAGTGTGCC...CCTCACTCTGCTTTCCAGAGAGAGGGGAGGTGCCATTTTGCATATCTTGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCATTTCCCAAAACCCAGTaGGGGCTGAATTCGACGGAG +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPFPKTQ*GLNSTE
Trigger: CTCCGTCGAATTCAGCCCCCACTGGGTTTTGGGAAA...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGGTGCGCAAGCCAGCCTaGAGGGACAGTGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEVRKPA*RDSAFL
Trigger: AAGGAATGCACTGTCCCTCCAGGCTGGCTTGCGCAC...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGGTGCGCAAGCCAGCCTaGAGGGACAGTGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQVRKPA*RDSAFL
Trigger: AAGGAATGCACTGTCCCTCCAGGCTGGCTTGCGCAC...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGACTCAGTGTCAGCTTaGTTGTTCCCTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSDSVSA*LFPVLL
Trigger: CAACAAGACAGGGAACAACCAAGCTGACACTGAGTC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCATCCACCAGCTTCTCATaGGACGGTGACTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPSTSFS*DGDSVS
Trigger: TGACACTGAGTCACCGTCCCATGAGAAGCTGGTGGA...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGCCTCTTGTCCTCCTCTaGGCAGGTCAGTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEPLVLL*AGQLSV
Trigger: CACCGACAACTGACCTGCCCAGAGGAGGACAAGAGG...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATCTGCCCCGGCTGCCTaGAGTGACAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKSAPAA*SDRGCG
Trigger: CCCACACCCCCTGTCACTCCAGGCAGCCGGGGCAGA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTGCTGGCACTGCCATaGAACTGTCTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLLLALP*NCLPGA
Trigger: AGCTCCAGGGAGACAGTTCCATGGCAGTGCCAGCAG...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGCGTCAGCCAGCTCCTaGGTGGTGACCTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTASASS*VVTSMN
Trigger: GTTCATCGAGGTCACCACCCAGGAGCTGGCTGACGC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCGTTGGGGCTCTGCTaGGCGCCCCCACTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKPLGLC*APPLRM
Trigger: CATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGG...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGCAGCTCTCGTCCTCTaGGGCCACAGCCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVAALVL*GHSPVL
Trigger: CAGGACAGGGCTGTGGCCCCAGAGGACGAGAGCTGC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CAA 72 bp GCCACCTATTCTGTAAGCCTTGCCCCATCAAGTGGTTaGCATTCTGGGGGAATTGCAGGCCCTAGGATTTCT +
Preference number: 4 (lower is better)
Translates to: ATYSVSLAPSSG*HSGGIAGPRIS
Trigger: AGAAATCCTAGGGCCTGCAATTCCCCCAGAATGCAAACCACTTGATGGGGCAAGGCTTACAGAATAGGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTGCGCCAGTAGCGGCTaGATTTGGATTTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWCASSG*IWIWRS
Trigger: GGATCTCCAAATCCAAATTCAGCCGCTACTGGCGCA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGGAGCATTTCTGCAGTaGAAAGGGCCAGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLGAFLQ*KGPGGL
Trigger: AAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTGCCCAGGGGAGACATaGTCTTCGTCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTCPGET*SSSPPG
Trigger: TCCTGGTGGAGACGAAGATCATGTCTCCCCTGGGCA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTGGCCCTCAGGGGTCTaGGGACTCGCAGCACTCGTA +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPWPSGV*GLAALV
Trigger: TACGAGTGCTGCGAGTCCTCAGACCCCTGAGGGCCA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCATATAGAGCTTTCCCTTaGAGAGCTGGACCCCAATGC +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPYRAFP*RAGPQC
Trigger: GCATTGGGGTCCAGCTCTTCAAGGGAAAGCTCTATA...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTGCTTCACCAGGCGCATaGCCCGGAAGAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPASPGA*PGRGGR
Trigger: TCTTCCGCCTCTTCCGGGTCATGCGCCTGGTGAAGC...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGCTTCACCAGGCGCATaGCCCGGAAGAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVASPGA*PGRGGR
Trigger: TCTTCCGCCTCTTCCGGGTCATGCGCCTGGTGAAGC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCATTGCAGGCCACACGGTaGGGACACAATTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPLQATR*GHNFPK
Trigger: TTTTGGGAAATTGTGTCCTCACCGTGTGGCCTGCAA...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAACACTCTGATAGTAGGTaGCATGGTTGCCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQHSDSR*HGCRTG
Trigger: GCCTGTTCGGCAACCATGTCACCTACTATCAGAGTG...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGCTTCTCATGGGACGGTaGCTCAGTGTCAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWLLMGR*LSVSLV
Trigger: AACCAAGCTGACACTGAGTCACCGTCCCATGAGAAG...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKGPPQC*PCWSSQ
Trigger: CTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAACTGTCCCAGTCCTTCTaGAATCAAGACCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQLSQSF*NQDRFH
Trigger: GTGGAAGCGGTCTTGATTTCAGAAGGACTGGGACAG...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTGGGTTTCTGTAGAGTaGCTAAACCAAGCAAACTTC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVWVSVE*LNQANF
Trigger: GAAGTTTGCTTGGTTTAGTCACTCTACAGAAACCCA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112825.9
ENSMUST00000188522.7
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCAGTCATATGGTTCCTaGAGGAGGTGTGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLQSYGS*RRCAGR
Trigger: CCGTCCAGCACACCTCCTTCAGGAACCATATGACTG...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112825.9
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGGCGGCATCGATGGCTaGCTGCCAGGACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKGGIDG*LPGQCC
Trigger: GCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGCCGTGTGGCGGTTGTaGCCCCCTGCTTCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVAVWRL*PPASWV
Trigger: AACCCAAGAAGCAGGGGGGCACAACCGCCACACGGC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGACAAGAAGGGCAATGTaGAGCAGAGGCACCATGGCC +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQTRRAM*SRGTMA
Trigger: GGCCATGGTGCCTCTGCTGCACATTGCCCTTCTTGT...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATCTTCTTCTAGTTGCTaGTTCTCTCGAAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSSSSSC*FSRSFW
Trigger: CCAGAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTAGATCTTCTTCTAGTTaGTGCTTCTCTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVRSSSS*CFSRSF
Trigger: GAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGATCT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGGGGTCAATGTCTTCTaGCTGGGTGATCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLGVNVF*LGDPVQ
Trigger: CTGGACTGGATCACCCAGGCAGAAGACATTGACCCC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGGGGGTCAATGTCTTCTaGCTGGGTGATCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQGVNVF*LGDPVQ
Trigger: CTGGACTGGATCACCCAGGCAGAAGACATTGACCCC...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGGGGGTCAATGTCTTCTaGCTGGGTGATCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEGVNVF*LGDPVQ
Trigger: CTGGACTGGATCACCCAGGCAGAAGACATTGACCCC...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGTTGGACTTAACTGCTaGACGGCATTTTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSVGLNC*TAFSSA
Trigger: TGCAGAAGAAAATGCCGTGCAGCAGTTAAGTCCAAC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGCCAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTTGGCAGACACAGTGGGAAGTTATCGAACGTaGTCCTACGGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: SQAPPTTSPLANSLADTVGSYRT*SYGSAS
Trigger: AGATGCAGACCCGTAGGAGCACGTTCGATAACTTCC...CACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTTCATCCTCTTCCCCTaGAGTGTCTGGGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWFILFP*SVWVGV
Trigger: CACTCCAACCCAGACACTGCAGGGGAAGAGGATGAA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTCCCAACTATGGCTGTCTGTGTTTGGGCTAATCATGGGTCAAAGGTGAGTCTATTCATCCTCTTCCCCTaGAGTGTCTGGGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: LPTMAVCVWANHGSKVSLFILFP*SVWVGV
Trigger: CACTCCAACCCAGACACTGCAGGGGAAGAGGATGAA...TAGACTCACCTTTGACCCATGATTAGCCCAAACACAGACAGCCATAGTTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGCCTTTTCCTTAAGGTaGAGCTCAGACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTAFSLR*SSDRGR
Trigger: CCGGCCCCTGTCTGAGCTGCACCTTAAGGAAAAGGC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATGTCAAAGTCAAACTTaGTGTTCTCCCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSCQSQT*CSPSFE
Trigger: CTCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGGCGGGAGTTCTCCTCTaGACTCATAGAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEAGVLL*THRGRA
Trigger: TGCTCTCCCTCTATGAGTGCAGAGGAGAACTCCCGC...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTCAGGCCCAATGTCATaGAAGGTGCGCAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTSGPMS*KVRKPA
Trigger: GGCTGGCTTGCGCACCTTGCATGACATTGGGCCTGA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCCAGGTTGGAGTTGGTaGCGTTGGAGTCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTPGWSW*RWSRLP
Trigger: CGGAAGACGACTCCAACGCCACCAACTCCAACCTGG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTGGCCCCATCAGCTTTaGTTGCTTGTTCTAAAATTG +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVWPHQL*LLVLKL
Trigger: CAATTTTAGAACAAGCAACCAAAGCTGATGGGGCCA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTCCGATGGGCAAGCCTaGCTCCACAGTTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLSDGQA*LHSFLP
Trigger: AGGGAGAAAACTGTGGAGCCAGGCTTGCCCATCGGA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGTCCGATGGGCAAGCCTaGCTCCACAGTTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAESDGQA*LHSFLP
Trigger: AGGGAGAAAACTGTGGAGCCAGGCTTGCCCATCGGA...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCACCAGGAGGGCTTTATTaGCTGTGTCTTGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPPGGLY*LCLALL
Trigger: CAGAAGTGCAAGACACAGCCAATAAAGCCCTCCTGG...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGGTTTCTTTTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWVSFLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAAAAGAAAC...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAACTGCAGTGTCTGGGTTaGAGTGGGGACTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQLQCLG*SGDSYP
Trigger: AGGATAAGAGTCCCCACTCCAACCCAGACACTGCAG...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGCTGCAGTGTCTGGGTTaGAGTGGGGACTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWLQCLG*SGDSYP
Trigger: AGGATAAGAGTCCCCACTCCAACCCAGACACTGCAG...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGGCACACTTCTTGCCTaGCATGCAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLGTLLA*HAGQHD
Trigger: ATCATGCTGGCCTGCATGCCAGGCAAGAAGTGTGCC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATTTCCCAAAACCCAGTaGGGGCTGAATTCGACGGAG +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQFPKTQ*GLNSTE
Trigger: CTCCGTCGAATTCAGCCCCCACTGGGTTTTGGGAAA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTTTCCCAAAACCCAGTaGGGGCTGAATTCGACGGAG +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWFPKTQ*GLNSTE
Trigger: CTCCGTCGAATTCAGCCCCCACTGGGTTTTGGGAAA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCTGCTGGCACTGCCATaGAACTGTCTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTLLALP*NCLPGA
Trigger: AGCTCCAGGGAGACAGTTCCATGGCAGTGCCAGCAG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CAA 72 bp CTTAACATCAGCTTCCGTGGGCTTGGAGTAGCTCTTTaGAAATCCAGACACTCCTTCCACAGCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LNISFRGLGVAL*KSRHSFHSSLL
Trigger: GAGCAAGGAGCTGTGGAAGGAGTGTCTGGATTTCAAAAGAGCTACTCCAAGCCCACGGAAGCTGATGTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTGCGCCAGTAGCGGCTaGATTTGGATTTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQCASSG*IWIWRS
Trigger: GGATCTCCAAATCCAAATTCAGCCGCTACTGGCGCA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTGTCTTGCACTTCTGTaGGCCAGTGAGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLCLALL*ASEAGC
Trigger: ACAACCAGCCTCACTGGCTCACAGAAGTGCAAGACA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTGTCTTGCACTTCTGTaGGCCAGTGAGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQCLALL*ASEAGC
Trigger: ACAACCAGCCTCACTGGCTCACAGAAGTGCAAGACA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGTGTCTTGCACTTCTGTaGGCCAGTGAGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAECLALL*ASEAGC
Trigger: ACAACCAGCCTCACTGGCTCACAGAAGTGCAAGACA...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGGATCTGAAACACAGTaGGGAGAGACTGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLGSETQ*GETAGS
Trigger: ACTTCCCGCAGTCTCTCCTCACTGTGTTTCAGATCC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCAGCAGGTCCAGGATATTaGAGTAGTTTCGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPAGPGY*SSFGRK
Trigger: CTTTCTGCCGAAACTACTTCAATATCCTGGACCTGC...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAACTGCAGCAGAGTGGTaGCAATTACGATGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQTAAEW*QLRCSR
Trigger: TCGGGAACATCGTAATTGTCACCACTCTGCTGCAGT...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATATAGAGCTTTCCCTTaGAGAGCTGGACCCCAATGC +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQYRAFP*RAGPQC
Trigger: GCATTGGGGTCCAGCTCTTCAAGGGAAAGCTCTATA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTATAGAGCTTTCCCTTaGAGAGCTGGACCCCAATGC +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWYRAFP*RAGPQC
Trigger: GCATTGGGGTCCAGCTCTTCAAGGGAAAGCTCTATA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTTGAATTCATCCAGGTaGTGGGGACCGAGGATAGAC +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWLNSSR*WGPRID
Trigger: GTCTATCCTCGGTCCCCATCACCTGGATGAATTCAA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCCAGTGGGGGCTaGATTCGACGGAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVKPSGG*IRRRRV
Trigger: GACCCTCCTCCGTCGAATTCAGCCCCCACTGGGTTT...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGCTTCTCATGGGACGGTaGCTCAGTGTCAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAELLMGR*LSVSLV
Trigger: AACCAAGCTGACACTGAGTCACCGTCCCATGAGAAG...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATGGGTTTCTGTAGAGTaGCTAAACCAAGCAAACTTC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSWVSVE*LNQANF
Trigger: GAAGTTTGCTTGGTTTAGTCACTCTACAGAAACCCA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112825.9
ENSMUST00000188522.7
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCTTGCACAGCTCACGTaGGCACAGGCAGTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTLAQLT*AQAVKA
Trigger: TGCCTTAACTGCCTGTGCTCACGTGAGCTGTGCAAG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAAGATCTTCTTCTAGTTaGTGCTTCTCTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSRSSSS*CFSRSF
Trigger: GAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGATCT...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGACAGTGAGGAGAGACTaGGGGAAGTTATCGAACGTG +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWTVRRD*GKLSNV
Trigger: CACGTTCGATAACTTCCCGCAGTCTCTCCTCACTGT...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTTCATCCTCTTCCCCTaGAGTGTCTGGGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLFILFP*SVWVGV
Trigger: CACTCCAACCCAGACACTGCAGGGGAAGAGGATGAA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTTCCGGCATGGGAACTaGCTTTTCCTTAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWFRHGN*LFLKVQ
Trigger: CTGCACCTTAAGGAAAAGGCAGTTCCCATGCCGGAA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGGCTGAAGATGAAAAATaGACTGGCTTCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWAEDEK*TGFRHG
Trigger: CCCATGCCGGAAGCCAGTGCATTTTTCATCTTCAGC...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAGCTGAAGATGAAAAATaGACTGGCTTCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQAEDEK*TGFRHG
Trigger: CCCATGCCGGAAGCCAGTGCATTTTTCATCTTCAGC...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGGGTCTCCCCTTCCGTaGTGTTGCTGGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVGSPLP*CCWAQT
Trigger: AGTCTGAGCCCAGCAACAGCACGGAAGGGGAGACCC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGGAGGAAAGTTGCCCCTaGTGTCACTCTGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWEESCP*CHSDSR
Trigger: CCTACTATCAGAGTGACAGCAGGGGCAACTTTCCTC...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAACGTCTGAGGAAAGTTaGCCCTGCTGTCACTCTGAT +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQTSEES*PCCHSD
Trigger: ATCAGAGTGACAGCAGGGGCAACTTTCCTCAGACGT...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGGCTCAAGCCTGCCACTaGCAATGCCTGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEAQACH*QCLMMN
Trigger: GTTCATCATCAGGCATTGGCAGTGGCAGGCTTGAGC...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCCGCTTCCACCAGGCTaGTGGCACTGCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPPLPPG*WHCHGT
Trigger: AGTTCCATGGCAGTGCCAGCAGCCTGGTGGAAGCGG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACTGAGGATGTTGTCTaGGGCGTTCTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAETEDVV*GVLHLL
Trigger: GAGGAGATGGAGAACGCCGCAGACAACATCCTCAGT...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCATTGGCATTCATGTTaGCATGAGCTGGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTHWHSC*HELGVG
Trigger: GCCCACGCCCAGCTCATGCCAACATGAATGCCAATG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGCCAGGAGGGCTTTATTaGCTGTGTCTTGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWPGGLY*LCLALL
Trigger: CAGAAGTGCAAGACACAGCCAATAAAGCCCTCCTGG...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAACCAGGAGGGCTTTATTaGCTGTGTCTTGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQPGGLY*LCLALL
Trigger: CAGAAGTGCAAGACACAGCCAATAAAGCCCTCCTGG...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTCTTCCTCCTCCTTTTaGGCTGAGGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTSSSSF*AEVRLS
Trigger: GGAGAGCCTGACCTCAGCCCAAAAGGAGGAGGAAGA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCATATCCTCGTTTTCACTaGGCTGGAGGTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPYPRFH*AGGHPC
Trigger: ACATGGATGACCTCCAGCCCAGTGAAAACGAGGATA...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTGCAGTGTCTGGGTTaGAGTGGGGACTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLLQCLG*SGDSYP
Trigger: AGGATAAGAGTCCCCACTCCAACCCAGACACTGCAG...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGTCATTGACAATACGGTaGCACTGCAGGCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAESLTIR*HCRRNL
Trigger: CAGGTTCCGCCTGCAGTGCCACCGTATTGTCAATGA...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTCATTGACAATACGGTaGCACTGCAGGCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQSLTIR*HCRRNL
Trigger: CAGGTTCCGCCTGCAGTGCCACCGTATTGTCAATGA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGGCATTGCCTAGGATATaGTTCCTGAAGGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWALPRI*FLKEVC
Trigger: GCACACCTCCTTCAGGAACCATATCCTAGGCAATGC...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGCCCTTGTCTTCTGTGTaGGAGTCAATGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEPLSSV*ESMERY
Trigger: GTACCGCTCCATTGACTCCCACACAGAAGACAAGGG...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGCACGGTAGTTGTAGATaGGGCCCTTGTCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWHGSCR*GPCLLC
Trigger: ACACAGAAGACAAGGGCCCCATCTACAACTACCGTG...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCATCCACACATTGTCTCTaGTTCTTGTCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPSTHCL*FLSSSQ
Trigger: CTGTGAGCTGGACAAGAACCAGAGACAATGTGTGGA...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTTGGGTATGTTCAGCTaGATTAGTCTCACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLGMFS*ISLTEN
Trigger: ATTCTCAGTGAGACTAATCCAGCTGAACATACCCAA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGTTTCCCAAAACCCAGTaGGGGCTGAATTCGACGGAG +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEFPKTQ*GLNSTE
Trigger: CTCCGTCGAATTCAGCCCCCACTGGGTTTTGGGAAA...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTCCACCAGCTTCTCATaGGACGGTGACTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLSTSFS*DGDSVS
Trigger: TGACACTGAGTCACCGTCCCATGAGAAGCTGGTGGA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGAATGTGGTAGGAGAATaGCTTCTCTGCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLNVVGE*LLCRRG
Trigger: CCCCCTCCTGCAGAGAAGCCATTCTCCTACCACATT...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTCTGCCCCGGCTGCCTaGAGTGACAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVSAPAA*SDRGCG
Trigger: CCCACACCCCCTGTCACTCCAGGCAGCCGGGGCAGA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGGGGTTCCCAGGGCTCTaGAAATCAGGGTGGATAAGA +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEGFPGL*KSGWIR
Trigger: TCTTATCCACCCTGATTTCCAGAGCCCTGGGAACCC...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTACATGCAATGGGAGCTaGGCTGGGTTCCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPTCNGS*AGFPGL
Trigger: GAGCCCTGGGAACCCAGCCCAGCTCCCATTGCATGT...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
3UTR CAA 72 bp TCACAAGAGCAGACTCATTGCCACGGAGGAACATCCTaGCTGGAATTTCGAGCAGATTCTCACATGATCTCC +
Preference number: 4 (lower is better)
Translates to: SQEQTHCHGGTS*LEFRADSHMIS
Trigger: GGAGATCATGTGAGAATCTGCTCGAAATTCCAGCAAGGATGTTCCTCCGTGGCAATGAGTCTGCTCTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
3UTR CAA 72 bp TTGTTCTCTAGGCCCAAATTTAGGAGCAGTAGGGGTTaGTCACTTGGCCTCTACTCACCAGCCACGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LFSRPKFRSSRG*SLGLYSPATFF
Trigger: AAAGAACGTGGCTGGTGAGTAGAGGCCAAGTGACAAACCCCTACTGCTCCTAAATTTGGGCCTAGAGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTGCGCCAGTAGCGGCTaGATTTGGATTTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTCASSG*IWIWRS
Trigger: GGATCTCCAAATCCAAATTCAGCCGCTACTGGCGCA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGGATCTGAAACACAGTaGGGAGAGACTGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTGSETQ*GETAGS
Trigger: ACTTCCCGCAGTCTCTCCTCACTGTGTTTCAGATCC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp AAAGGCTACTTCAGTTTCCTTGGCACAAGGAGAAAGCAGTCTGTGGGTATGGCTGCAGGTCCAGGATATTaGAGTAGTTTCGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: KGYFSFLGTRRKQSVGMAAGPGY*SSFGRK
Trigger: CTTTCTGCCGAAACTACTTCAATATCCTGGACCTGC...AGCCATACCCACAGACTGCTTTCTCCTTGTGCCAAGGAAACTGAAGTAGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGACTGCAGCAGAGTGGTaGCAATTACGATGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLTAAEW*QLRCSR
Trigger: TCGGGAACATCGTAATTGTCACCACTCTGCTGCAGT...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTATTCATGGCGATTTTaGAGAGGCAGCTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWYSWRF*RGSSGH
Trigger: ATGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACAGTGCATTCCTTTGTaGGGGCTTGCCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKQCIPL*GLAHQP
Trigger: GGGCTGGTGGGCAAGCCCTCACAAAGGAATGCACTG...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCACTCTGATAGTAGGTaGCATGGTTGCCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTHSDSR*HGCRTG
Trigger: GCCTGTTCGGCAACCATGTCACCTACTATCAGAGTG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPCSLSC*CAVGAG
Trigger: CCCAGCGCCCACTGCACATCAACAAGACAGGGAACA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGTACCACCTTGCCCTTaGACTTCCTCTCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLVPPCP*TSSLFP
Trigger: AGGAAACAGAGAGGAAGTTCAAGGGCAAGGTGGTAC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCATCTTCTTCTAGTTGCTaGTTCTCTCGAAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPSSSSC*FSRSFW
Trigger: CCAGAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGA...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTCTCACTTGTGGGCATaGTCATGTTTCGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWSHLWA*SCFEAC
Trigger: ACAAGCCTCGAAACATGAGCATGCCCACAAGTGAGA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR GCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCAGTTGGACTTAACTGCTaGACGGCATTTTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPVGLNC*TAFSSA
Trigger: TGCAGAAGAAAATGCCGTGCAGCAGTTAAGTCCAAC...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGGAAGTTATCGAACGTaGTCCTACGGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLGSYRT*SYGSAS
Trigger: AGATGCAGACCCGTAGGAGCACGTTCGATAACTTCC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGACAGTGAGGAGAGACTaGGGGAAGTTATCGAACGTG +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQTVRRD*GKLSNV
Trigger: CACGTTCGATAACTTCCCGCAGTCTCTCCTCACTGT...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTTCCGGCATGGGAACTaGCTTTTCCTTAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLFRHGN*LFLKVQ
Trigger: CTGCACCTTAAGGAAAAGGCAGTTCCCATGCCGGAA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATTCCTGAAGGAGGTGTaGTGGACGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVFLKEV*WTGSSA
Trigger: TGCTGAGGACCCCGTCCAGCACACCTCCTTCAGGAA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTCCTTTGTGAGGGCTTaGCCACCAGCCCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPSFVRA*PPAPAL
Trigger: AAGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATCAGGCCCAATGTCATaGAAGGTGCGCAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVSGPMS*KVRKPA
Trigger: GGCTGGCTTGCGCACCTTGCATGACATTGGGCCTGA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTCAGGCCCAATGTCATaGAAGGTGCGCAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPSGPMS*KVRKPA
Trigger: GGCTGGCTTGCGCACCTTGCATGACATTGGGCCTGA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGAGGAAAGTTGCCCCTaGTGTCACTCTGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLEESCP*CHSDSR
Trigger: CCTACTATCAGAGTGACAGCAGGGGCAACTTTCCTC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGACGTCTGAGGAAAGTTaGCCCTGCTGTCACTCTGAT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLTSEES*PCCHSD
Trigger: ATCAGAGTGACAGCAGGGGCAACTTTCCTCAGACGT...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGCTCAAGCCTGCCACTaGCAATGCCTGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTAQACH*QCLMMN
Trigger: GTTCATCATCAGGCATTGGCAGTGGCAGGCTTGAGC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGAGGGGGCTCAAGCCTaGCACTGCCAATGCCTGATG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKEGAQA*HCQCLM
Trigger: CATCAGGCATTGGCAGTGGCAGGCTTGAGCCCCCTC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCCTCAGACCAGGAGCTaGAGTGGATGGATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPPQTRS*SGWMGS
Trigger: GCTTCCCATCCATCCACTGCAGCTCCTGGTCTGAGG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCGCTTCCACCAGGCTaGTGGCACTGCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKPLPPG*WHCHGT
Trigger: AGTTCCATGGCAGTGCCAGCAGCCTGGTGGAAGCGG...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGACATGGTGGCCACATaGAATGGGAGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKDMVAT*NGSWAG
Trigger: CCCAGCCCAGCTCCCATTGCATGTGGCCACCATGTC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGTCCTGCAGCTGCATTaGCATTCATGTTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLVLQLH*HSCWHE
Trigger: CTCATGCCAACATGAATGCCAATGCAGCTGCAGGAC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGTTCCAGGTTGGAGTTaGTGGCGTTGGAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTVPGWS*WRWSRL
Trigger: AAGACGACTCCAACGCCACCAACTCCAACCTGGAAC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGAATCTCCTCGGGCTTTaGCTTTCTCCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQNLLGL*LSPSLW
Trigger: CCAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATT...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCCAGGAGGGCTTTATTaGCTGTGTCTTGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLPGGLY*LCLALL
Trigger: CAGAAGTGCAAGACACAGCCAATAAAGCCCTCCTGG...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGCCAGGAGGGCTTTATTaGCTGTGTCTTGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQPGGLY*LCLALL
Trigger: CAGAAGTGCAAGACACAGCCAATAAAGCCCTCCTGG...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTGCAGCAGGGAGGCAATaGAGCGCACTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPAAGRQ*SALSSA
Trigger: TGCTGAACTCAGTGCGCTCCATTGCCTCCCTGCTGC...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCAGCGGAACCTGTTGTTTaGGCTGAAGATGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPAEPVV*AEDEKC
Trigger: GCATTTTTCATCTTCAGCCCAAACAACAGGTTCCGC...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGGCATTGCCTAGGATATaGTTCCTGAAGGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEALPRI*FLKEVC
Trigger: GCACACCTCCTTCAGGAACCATATCCTAGGCAATGC...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCCCTTGTCTTCTGTGTaGGAGTCAATGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTPLSSV*ESMERY
Trigger: GTACCGCTCCATTGACTCCCACACAGAAGACAAGGG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGCACGGTAGTTGTAGATaGGGCCCTTGTCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEHGSCR*GPCLLC
Trigger: ACACAGAAGACAAGGGCCCCATCTACAACTACCGTG...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATACCACACTTTGTACTaGTGCTGGTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQYHTLY*CWFLGM
Trigger: CATCCCCAAGAACCAGCACCAGTACAAAGTGTGGTA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGTGCGCAAGCCAGCCTaGAGGGACAGTGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVVRKPA*RDSAFL
Trigger: AAGGAATGCACTGTCCCTCCAGGCTGGCTTGCGCAC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTACTTGTTGATGTGCAGTaGGCGCTGGGTGGCGAACGT +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVLVDVQ*ALGGER
Trigger: ACGTTCGCCACCCAGCGCCCACTGCACATCAACAAG...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTCCACCAGCTTCTCATaGGACGGTGACTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTSTSFS*DGDSVS
Trigger: TGACACTGAGTCACCGTCCCATGAGAAGCTGGTGGA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCCTCTTGTCCTCCTCTaGGCAGGTCAGTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPPLVLL*AGQLSV
Trigger: CACCGACAACTGACCTGCCCAGAGGAGGACAAGAGG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTACTGCTGGCACTGCCATaGAACTGTCTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVLLALP*NCLPGA
Trigger: AGCTCCAGGGAGACAGTTCCATGGCAGTGCCAGCAG...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCTGCTGGCACTGCCATaGAACTGTCTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPLLALP*NCLPGA
Trigger: AGCTCCAGGGAGACAGTTCCATGGCAGTGCCAGCAG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAACTCAGTCTCACTTGTaGGCATGCTCACATGGGTTT +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQTQSHL*ACSHGF
Trigger: AAACCCATGTGAGCATGCCCACAAGTGAGACTGAGT...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112825.9
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCGAGTGACTGGAGAGTaGCTGGTATGGGGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPRVTGE*LVWGCG
Trigger: TCCACACCCCCATACCAGCCACTCTCCAGTCACTCG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGAGTCCAGGTAGCCTTTaGGATCTTCTTCTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWSPGSL*DLLLVA
Trigger: AGCAACTAGAAGAAGATCTCAAAGGCTACCTGGACT...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGGAGCATTTCTGCAGTaGAAAGGGCCAGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVGAFLQ*KGPGGL
Trigger: AAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGGCATCTCATCGAAATTaGACTTCCCTCCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWASHRN*TSLQRA
Trigger: AGCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGC...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTCCCCGGTCAGGATCTaGAACACAGTGAGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPSPVRI*NTVRRD
Trigger: GTCTCTCCTCACTGTGTTTCAGATCCTGACCGGGGA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGCAAGGGTCGGGCCTTaGGGGCATATTCCACACATT +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVARVGP*GHIPHI
Trigger: AATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTATTCATGGCGATTTTaGAGAGGCAGCTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQYSWRF*RGSSGH
Trigger: ATGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTTGCAGGCCACACGGTaGGGACACAATTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTLQATR*GHNFPK
Trigger: TTTTGGGAAATTGTGTCCTCACCGTGTGGCCTGCAA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLMNLGS*ANCPSP
Trigger: AGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCAT...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTGGGGTCAATGTCTTCTaGCTGGGTGATCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPGVNVF*LGDPVQ
Trigger: CTGGACTGGATCACCCAGGCAGAAGACATTGACCCC...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGTCTCACTTGTGGGCATaGTCATGTTTCGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAESHLWA*SCFEAC
Trigger: ACAAGCCTCGAAACATGAGCATGCCCACAAGTGAGA...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR GCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGAGGATGCCACAAGGTTaGTCAAGGAATTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLRMPQG*SRNSST
Trigger: GGTACTGGAATTCCTTGAGCAACCTTGTGGCATCCT...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATTCCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGGAA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGGAAGTTATCGAACGTaGTCCTACGGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTGSYRT*SYGSAS
Trigger: AGATGCAGACCCGTAGGAGCACGTTCGATAACTTCC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGCCTTTTCCTTAAGGTaGAGCTCAGACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKAFSLR*SSDRGR
Trigger: CCGGCCCCTGTCTGAGCTGCACCTTAAGGAAAAGGC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTTCCGGCATGGGAACTaGCTTTTCCTTAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTFRHGN*LFLKVQ
Trigger: CTGCACCTTAAGGAAAAGGCAGTTCCCATGCCGGAA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTACTCTTGTTCCCCCTaGTCCTGGAAGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTYSCSP*SWKVTM
Trigger: CATTGTCACCTTCCAGGAGCAGGGGGAACAAGAGTA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCCCCTTCCGTGCTGTTaGTGGGCTCAGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVPLPCC*WAQTLG
Trigger: CCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAAGAAGACAGCAAAGCTaGTGCCACAGGGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKRRQQS*CHRGSP
Trigger: GGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCTTCT...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTTGCCCACCAGCCCCTaGTCTTTTCGCTTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTLPTSP*SFRFLN
Trigger: ATTCAAGAAGCGAAAAGAGCAGGGGCTGGTGGGCAA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACAATGTCATGCAAGGTaGGCAAGCCAGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKQCHAR*ASQPGG
Trigger: CCCTCCAGGCTGGCTTGCGCACCTTGCATGACATTG...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCACGTCTGAGGAAAGTTaGCCCTGCTGTCACTCTGAT +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTTSEES*PCCHSD
Trigger: ATCAGAGTGACAGCAGGGGCAACTTTCCTCAGACGT...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGCAGGCTGGGCTCACTaGAGTACTCGGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKAGWAH*STRLLH
Trigger: GTGAAGAAGCCGAGTACTGCAGTGAGCCCAGCCTGC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCAGACCAGGAGCTaGAGTGGATGGATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKPQTRS*SGWMGS
Trigger: GCTTCCCATCCATCCACTGCAGCTCCTGGTCTGAGG...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTACCACTCGTTCCAGGTTaGAGTTGGTGGCGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVPLVPG*SWWRWS
Trigger: ACTCCAACGCCACCAACTCCAACCTGGAACGAGTGG...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAACTTTCTCCCTCTCTTTaGAAAACTCCCCGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQLSPSL*KTPRSK
Trigger: TTTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAG...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCAATCTCCTCGGGCTTTaGCTTTCTCCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTNLLGL*LSPSLW
Trigger: CCAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATT...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGACTCAGTCTCACTTGTaGGCATGCTCATGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLTQSHL*ACSCFE
Trigger: CTCGAAACATGAGCATGCCCACAAGTGAGACTGAGT...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTCCGATGGGCAAGCCTaGCTCCACAGTTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPSDGQA*LHSFLP
Trigger: AGGGAGAAAACTGTGGAGCCAGGCTTGCCCATCGGA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCCAGGAGGGCTTTATTaGCTGTGTCTTGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTPGGLY*LCLALL
Trigger: CAGAAGTGCAAGACACAGCCAATAAAGCCCTCCTGG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTATCCTCGTTTTCACTaGGCTGGAGGTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLYPRFH*AGGHPC
Trigger: ACATGGATGACCTCCAGCCCAGTGAAAACGAGGATA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGTATCCTCGTTTTCACTaGGCTGGAGGTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEYPRFH*AGGHPC
Trigger: ACATGGATGACCTCCAGCCCAGTGAAAACGAGGATA...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPLCGSQ*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATTGACTCCCACACAG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTCCACACATTGTCTCTaGTTCTTGTCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLSTHCL*FLSSSQ
Trigger: CTGTGAGCTGGACAAGAACCAGAGACAATGTGTGGA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTCAGATCCCCAGAGATaGCCCGCCGGATCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVSDPQR*PAGSQA
Trigger: GGCCTGAGATCCGGCGGGCCATCTCTGGGGATCTGA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCTTGTCCTCCTCTaGGCAGGTCAGTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKPLVLL*AGQLSV
Trigger: CACCGACAACTGACCTGCCCAGAGGAGGACAAGAGG...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGCTGCAGTGGATGGATaGGAAGCTGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTAAVDG*EAAVEF
Trigger: AAACTCAACAGCAGCTTCCCATCCATCCACTGCAGC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACTCAGTCTCACTTGTaGGCATGCTCACATGGGTTT +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAETQSHL*ACSHGF
Trigger: AAACCCATGTGAGCATGCCCACAAGTGAGACTGAGT...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000112825.9
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGGAGCATTTCTGCAGTaGAAAGGGCCAGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKGAFLQ*KGPGGL
Trigger: AAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGCATCTCATCGAAATTaGACTTCCCTCCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLASHRN*TSLQRA
Trigger: AGCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGGCATCTCATCGAAATTaGACTTCCCTCCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEASHRN*TSLQRA
Trigger: AGCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGC...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTGGATCTGAAACACAGTaGGGAGAGACTGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPGSETQ*GETAGS
Trigger: ACTTCCCGCAGTCTCTCCTCACTGTGTTTCAGATCC...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGCAGGTCCAGGATATTaGAGTAGTTTCGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTAGPGY*SSFGRK
Trigger: CTTTCTGCCGAAACTACTTCAATATCCTGGACCTGC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTACACTCTGATAGTAGGTaGCATGGTTGCCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVHSDSR*HGCRTG
Trigger: GCCTGTTCGGCAACCATGTCACCTACTATCAGAGTG...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCTGTCCCAGTCCTTCTaGAATCAAGACCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPLSQSF*NQDRFH
Trigger: GTGGAAGCGGTCTTGATTTCAGAAGGACTGGGACAG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTACTGTCCCAGTCCTTCTaGAATCAAGACCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVLSQSF*NQDRFH
Trigger: GTGGAAGCGGTCTTGATTTCAGAAGGACTGGGACAG...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTGGGTTTCTGTAGAGTaGCTAAACCAAGCAAACTTC +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWWVSVE*LNQANF
Trigger: GAAGTTTGCTTGGTTTAGTCACTCTACAGAAACCCA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112825.9
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTCTCACTTGTGGGCATaGTCATGTTTCGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTSHLWA*SCFEAC
Trigger: ACAAGCCTCGAAACATGAGCATGCCCACAAGTGAGA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR GCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTGTCAAAGTCAAACTTaGTGTTCTCCCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQCQSQT*CSPSFE
Trigger: CTCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGGAGGGGGCTCAAGCCTaGCACTGCCAATGCCTGATG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVEGAQA*HCQCLM
Trigger: CATCAGGCATTGGCAGTGGCAGGCTTGAGCCCCCTC...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCCGCTTCCACCAGGCTaGTGGCACTGCCATGGAACT +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVPLPPG*WHCHGT
Trigger: AGTTCCATGGCAGTGCCAGCAGCCTGGTGGAAGCGG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTACTGAGGATGTTGTCTaGGGCGTTCTCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPTEDVV*GVLHLL
Trigger: GAGGAGATGGAGAACGCCGCAGACAACATCCTCAGT...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTGTTCCAGGTTGGAGTTaGTGGCGTTGGAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPVPGWS*WRWSRL
Trigger: AAGACGACTCCAACGCCACCAACTCCAACCTGGAAC...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR CCA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTGGCCCCATCAGCTTTaGTTGCTTGTTCTAAAATTG +
Preference number: 4 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWWPHQL*LLVLKL
Trigger: CAATTTTAGAACAAGCAACCAAAGCTGATGGGGCCA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGCTTTCTCCCTCTCTTTaGAAAACTCCCCGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAELSPSL*KTPRSK
Trigger: TTTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAG...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCACTCAGTCTCACTTGTaGGCATGCTCATGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTTQSHL*ACSCFE
Trigger: CTCGAAACATGAGCATGCCCACAAGTGAGACTGAGT...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVLGWQS*PASSSP
Trigger: AGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTGTTTCTTTTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPVSFLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAAAAGAAAC...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGCGGAACCTGTTGTTTaGGCTGAAGATGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLAEPVV*AEDEKC
Trigger: GCATTTTTCATCTTCAGCCCAAACAACAGGTTCCGC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATCATTGACAATACGGTaGCACTGCAGGCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVSLTIR*HCRRNL
Trigger: CAGGTTCCGCCTGCAGTGCCACCGTATTGTCAATGA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTTGATCGCGCTGGACTaGATGCCAAAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPLIALD*MPKEMR
Trigger: CCTCATCTCCTTTGGCATCCAGTCCAGCGCGATCAA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKLCGSQ*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATTGACTCCCACACAG...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCCCTTGTCTTCTGTGTaGGAGTCAATGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPPLSSV*ESMERY
Trigger: GTACCGCTCCATTGACTCCCACACAGAAGACAAGGG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGACTTTGTACTGGTGCTaGTTCTTGGGGATGTACCTT +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLTLYWC*FLGMYL
Trigger: AAGGTACATCCCCAAGAACCAGCACCAGTACAAAGT...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTACCACACTTTGTACTaGTGCTGGTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTYHTLY*CWFLGM
Trigger: CATCCCCAAGAACCAGCACCAGTACAAAGTGTGGTA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGGCACACTTCTTGCCTaGCATGCAGGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKGTLLA*HAGQHD
Trigger: ATCATGCTGGCCTGCATGCCAGGCAAGAAGTGTGCC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATTTCCCAAAACCCAGTaGGGGCTGAATTCGACGGAG +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVFPKTQ*GLNSTE
Trigger: CTCCGTCGAATTCAGCCCCCACTGGGTTTTGGGAAA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTGGCATTGGAGCCCGTaGATGAGTAGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVWHWSP*MSSCWG
Trigger: CCCCCAGCAGCTACTCATCCACGGGCTCCAATGCCA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAATGTGGTAGGAGAATaGCTTCTCTGCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVNVVGE*LLCRRG
Trigger: CCCCCTCCTGCAGAGAAGCCATTCTCCTACCACATT...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTAATGTGGTAGGAGAATaGCTTCTCTGCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPNVVGE*LLCRRG
Trigger: CCCCCTCCTGCAGAGAAGCCATTCTCCTACCACATT...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CAA 72 bp CAGGCAGAAAGGGATTTAACTGGACTTGTCTGTTACTaGGACTGTGTCATGGACACACACACACACATACAC +
Preference number: 4 (lower is better)
Translates to: QAERDLTGLVCY*DCVMDTHTHIH
Trigger: GTGTATGTGTGTGTGTGTGTCCATGACACAGTCCAAGTAACAGACAAGTCCAGTTAAATCCCTTTCTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATGTCTTGCACTTCTGTaGGCCAGTGAGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKCLALL*ASEAGC
Trigger: ACAACCAGCCTCACTGGCTCACAGAAGTGCAAGACA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGCATCTCATCGAAATTaGACTTCCCTCCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTASHRN*TSLQRA
Trigger: AGCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAACTGCAGCAGAGTGGTaGCAATTACGATGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVTAAEW*QLRCSR
Trigger: TCGGGAACATCGTAATTGTCACCACTCTGCTGCAGT...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGAGTTGTTGTTCCGATTaGTCTCTGTGGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLSCCSD*SLWCHS
Trigger: TGAATGACACCACAGAGATCAATCGGAACAACAACT...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGAGTTGTTGTTCCGATTaGTCTCTGTGGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQSCCSD*SLWCHS
Trigger: TGAATGACACCACAGAGATCAATCGGAACAACAACT...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTTGAATTCATCCAGGTaGTGGGGACCGAGGATAGAC +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPLNSSR*WGPRID
Trigger: GTCTATCCTCGGTCCCCATCACCTGGATGAATTCAA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATTGCAGGCCACACGGTaGGGACACAATTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVLQATR*GHNFPK
Trigger: TTTTGGGAAATTGTGTCCTCACCGTGTGGCCTGCAA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTTGCAGGCCACACGGTaGGGACACAATTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPLQATR*GHNFPK
Trigger: TTTTGGGAAATTGTGTCCTCACCGTGTGGCCTGCAA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCCGGAACATCTATTATaGCCTCCTGGTTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPPEHLL*PPGCSR
Trigger: CCTGCTACAACCAGGAGGGCATAATAGATGTTCCGG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTCTTCTTCTAGTTGCTaGTTCTCTCGAAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTSSSSC*FSRSFW
Trigger: CCAGAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGAGATCTTCTTCTAGTTaGTGCTTCTCTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQRSSSS*CFSRSF
Trigger: GAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGATCT...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGAGATCTTCTTCTAGTTaGTGCTTCTCTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SWDRKMQLPILVSEAEAERSSSS*CFSRSF
Trigger: GAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGATCT...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGTTGGACTTAACTGCTaGACGGCATTTTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTVGLNC*TAFSSA
Trigger: TGCAGAAGAAAATGCCGTGCAGCAGTTAAGTCCAAC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGGAAGTTATCGAACGTaGTCCTACGGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVGSYRT*SYGSAS
Trigger: AGATGCAGACCCGTAGGAGCACGTTCGATAACTTCC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAACAGTGAGGAGAGACTaGGGGAAGTTATCGAACGTG +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVTVRRD*GKLSNV
Trigger: CACGTTCGATAACTTCCCGCAGTCTCTCCTCACTGT...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTGCTGAAGATGAAAAATaGACTGGCTTCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPAEDEK*TGFRHG
Trigger: CCCATGCCGGAAGCCAGTGCATTTTTCATCTTCAGC...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTTCCTGAAGGAGGTGTaGTGGACGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVFLKEV*WTGSSA
Trigger: TGCTGAGGACCCCGTCCAGCACACCTCCTTCAGGAA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTACTCTTGTTCCCCCTaGTCCTGGAAGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPYSCSP*SWKVTM
Trigger: CATTGTCACCTTCCAGGAGCAGGGGGAACAAGAGTA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATACTCTTGTTCCCCCTaGTCCTGGAAGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVYSCSP*SWKVTM
Trigger: CATTGTCACCTTCCAGGAGCAGGGGGAACAAGAGTA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGAGACAGCAAAGCTGCTaGCACAGGGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVRQQSC*HRGSPL
Trigger: AAGGGGAGACCCCCTGTGGCAGCAGCTTTGCTGTCT...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTTGCCCACCAGCCCCTaGTCTTTTCGCTTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPLPTSP*SFRFLN
Trigger: ATTCAAGAAGCGAAAAGAGCAGGGGCTGGTGGGCAA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVAELPC*LLYSDS
Trigger: GCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGC...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGTGGGCTCCCATAGTTaGAACCTTGGTGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVVGSHS*NLGGFP
Trigger: AGGAAAACCACCAAGGTTCCAACTATGGGAGCCCAC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCCAGGTTGGAGTTGGTaGCGTTGGAGTCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVPGWSW*RWSRLP
Trigger: CGGAAGACGACTCCAACGCCACCAACTCCAACCTGG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CCA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTGGCCCCATCAGCTTTaGTTGCTTGTTCTAAAATTG +
Preference number: 4 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLWPHQL*LLVLKL
Trigger: CAATTTTAGAACAAGCAACCAAAGCTGATGGGGCCA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTAATCTCCTCGGGCTTTaGCTTTCTCCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPNLLGL*LSPSLW
Trigger: CCAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATT...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGCGGAACCTGTTGTTTaGGCTGAAGATGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTAEPVV*AEDEKC
Trigger: GCATTTTTCATCTTCAGCCCAAACAACAGGTTCCGC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATCATTGACAATACGGTaGCACTGCAGGCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKSLTIR*HCRRNL
Trigger: CAGGTTCCGCCTGCAGTGCCACCGTATTGTCAATGA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATTGATCGCGCTGGACTaGATGCCAAAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKLIALD*MPKEMR
Trigger: CCTCATCTCCTTTGGCATCCAGTCCAGCGCGATCAA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCCTTGTCTTCTGTGTaGGAGTCAATGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKPLSSV*ESMERY
Trigger: GTACCGCTCCATTGACTCCCACACAGAAGACAAGGG...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATTGGGTATGTTCAGCTaGATTAGTCTCACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQLGMFS*ISLTEN
Trigger: ATTCTCAGTGAGACTAATCCAGCTGAACATACCCAA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGGCAGGGGGCACCACCTaGTCCAACAGCTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVAGGTT*SNSFML
Trigger: TAGCATGAAGCTGTTGGACCAGGTGGTGCCCCCTGC...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCCTCTTGTCCTCCTCTaGGCAGGTCAGTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVPLVLL*AGQLSV
Trigger: CACCGACAACTGACCTGCCCAGAGGAGGACAAGAGG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTGTGGGCTCCCATAGTTaGAACCTCCAGGAGAAATGT +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPVGSHS*NLQEKC
Trigger: ACATTTCTCCTGGAGGTTCCAACTATGGGAGCCCAC...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCCACGTTTTCAGTGTTaGCAGACTCAGTCTCACTTG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPPRFQC*QTQSHL
Trigger: CAAGTGAGACTGAGTCTGTCAACACTGAAAACGTGG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCTAGGATATGGTTCCTaGAGGAGGTGTGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVLGYGS*RRCAGR
Trigger: CCGTCCAGCACACCTCCTTCAGGAACCATATCCTAG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATTGCAGGCCACACGGTaGGGACACAATTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKLQATR*GHNFPK
Trigger: TTTTGGGAAATTGTGTCCTCACCGTGTGGCCTGCAA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCGGAACATCTATTATaGCCTCCTGGTTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKPEHLL*PPGCSR
Trigger: CCTGCTACAACCAGGAGGGCATAATAGATGTTCCGG...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCAGATCTTCTTCTAGTTaGTGCTTCTCTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTRSSSS*CFSRSF
Trigger: GAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGATCT...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATCTCACTTGTGGGCATaGTCATGTTTCGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVSHLWA*SCFEAC
Trigger: ACAAGCCTCGAAACATGAGCATGCCCACAAGTGAGA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACAATTTTCTCCTCTTTaGTCTCCTCCACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKQFSPL*SPPRLA
Trigger: AGCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTG...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATACTCTTGTTCCCCCTaGTCCTGGAAGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKYSCSP*SWKVTM
Trigger: CATTGTCACCTTCCAGGAGCAGGGGGAACAAGAGTA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATTGCCCACCAGCCCCTaGTCTTTTCGCTTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKLPTSP*SFRFLN
Trigger: ATTCAAGAAGCGAAAAGAGCAGGGGCTGGTGGGCAA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGGGAACACCGTCAGCATaGCGAAGGCGAAGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVGTPSA*RRRSCR
Trigger: TCGACAACTTCGCCTTCGCCATGCTGACGGTGTTCC...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAAATCTCCTCGGGCTTTaGCTTTCTCCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKNLLGL*LSPSLW
Trigger: CCAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATT...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTCTTCCTCCTCCTTTTaGGCTGAGGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVSSSSF*AEVRLS
Trigger: GGAGAGCCTGACCTCAGCCCAAAAGGAGGAGGAAGA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTATCCTCGTTTTCACTaGGCTGGAGGTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPYPRFH*AGGHPC
Trigger: ACATGGATGACCTCCAGCCCAGTGAAAACGAGGATA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVLCGSQ*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATTGACTCCCACACAG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTCCACACATTGTCTCTaGTTCTTGTCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPSTHCL*FLSSSQ
Trigger: CTGTGAGCTGGACAAGAACCAGAGACAATGTGTGGA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGACTCAGTGTCAGCTTaGTTGTTCCCTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVDSVSA*LFPVLL
Trigger: CAACAAGACAGGGAACAACCAAGCTGACACTGAGTC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGCTGCAGTGGATGGATaGGAAGCTGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKAAVDG*EAAVEF
Trigger: AAACTCAACAGCAGCTTCCCATCCATCCACTGCAGC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTAGTCCAGGTAGCCTTTaGGATCTTCTTCTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPSPGSL*DLLLVA
Trigger: AGCAACTAGAAGAAGATCTCAAAGGCTACCTGGACT...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCACGTTTTCAGTGTTaGCAGACTCAGTCTCACTTG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKPRFQC*QTQSHL
Trigger: CAAGTGAGACTGAGTCTGTCAACACTGAAAACGTGG...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTGCGCCAGTAGCGGCTaGATTTGGATTTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVCASSG*IWIWRS
Trigger: GGATCTCCAAATCCAAATTCAGCCGCTACTGGCGCA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGCAGGTCCAGGATATTaGAGTAGTTTCGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKAGPGY*SSFGRK
Trigger: CTTTCTGCCGAAACTACTTCAATATCCTGGACCTGC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATATTCATGGCGATTTTaGAGAGGCAGCTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKYSWRF*RGSSGH
Trigger: ATGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCACTCTGATAGTAGGTaGCATGGTTGCCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVHSDSR*HGCRTG
Trigger: GCCTGTTCGGCAACCATGTCACCTACTATCAGAGTG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCTTCTCATGGGACGGTaGCTCAGTGTCAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVLLMGR*LSVSLV
Trigger: AACCAAGCTGACACTGAGTCACCGTCCCATGAGAAG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp GACCAGGCAGAAAGGGATTTAACTGGACTTGTCTGTTACTTGGACTGTGTCATGAAATGTAGAAACAGTTaGGTTGAGCTTCATGTACCA +
Preference number: 4 (lower is better)
Translates to: DQAERDLTGLVCYLDCVMKCRNS*VELHVP
Trigger: TGGTACATGAAGCTCAACTCAACTGTTTCTACATTT...CATGACACAGTCCAAGTAACAGACAAGTCCAGTTAAATCCCTTTCTGCCTGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCTCGGGAGCAAGTCCTaGAGCTGCATTGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVLGSKS*SCIGIH
Trigger: ATGAATGCCAATGCAGCTGCAGGACTTGCTCCCGAG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGGCTCAAGCCTGCCACTaGCAATGCCTGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVAQACH*QCLMMN
Trigger: GTTCATCATCAGGCATTGGCAGTGGCAGGCTTGAGC...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATTGGTGGTTTTCCTCTaGAACGTACATCCTCGTGTT +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVLVVFL*NVHPRV
Trigger: AACACGAGGATGTACGTTCCAGAGGAAAACCACCAA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
CDS-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATTCTCTCGAAGCTTCTaGAAATCTCCTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKFSRSF*KSPRAL
Trigger: CAAAGCCCGAGGAGATTTCCAGAAGCTTCGAGAGAA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGCGGAACCTGTTGTTTaGGCTGAAGATGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVAEPVV*AEDEKC
Trigger: GCATTTTTCATCTTCAGCCCAAACAACAGGTTCCGC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTCATTGACAATACGGTaGCACTGCAGGCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVSLTIR*HCRRNL
Trigger: CAGGTTCCGCCTGCAGTGCCACCGTATTGTCAATGA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTTGATCGCGCTGGACTaGATGCCAAAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVLIALD*MPKEMR
Trigger: CCTCATCTCCTTTGGCATCCAGTCCAGCGCGATCAA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATACCACACTTTGTACTaGTGCTGGTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKYHTLY*CWFLGM
Trigger: CATCCCCAAGAACCAGCACCAGTACAAAGTGTGGTA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTCCACCAGCTTCTCATaGGACGGTGACTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVSTSFS*DGDSVS
Trigger: TGACACTGAGTCACCGTCCCATGAGAAGCTGGTGGA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCAGAAGCTGGAAATGTaGTCTGGAGGGTTGTTCTTA +
Preference number: 4 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPQKLEM*SGGLFL
Trigger: TAAGAACAACCCTCCAGACCACATTTCCAGCTTCTG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
3UTR CAA 72 bp TTTCACATACTATGTGGATCAAACTTCTTAAGACAGTaGGAGGAAAAGGGTGGGCTTAAGAGTGGCAGCATT +
Preference number: 4 (lower is better)
Translates to: FHILCGSNFLRQ*EEKGGLKSGSI
Trigger: AATGCTGCCACTCTTAAGCCCACCCTTTTCCTCCAACTGTCTTAAGAAGTTTGATCCACATAGTATGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAAGTCCAGGTAGCCTTTaGGATCTTCTTCTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKSPGSL*DLLLVA
Trigger: AGCAACTAGAAGAAGATCTCAAAGGCTACCTGGACT...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTTGAATTCATCCAGGTaGTGGGGACCGAGGATAGAC +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVLNSSR*WGPRID
Trigger: GTCTATCCTCGGTCCCCATCACCTGGATGAATTCAA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGTTGGACTTAACTGCTaGACGGCATTTTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKVGLNC*TAFSSA
Trigger: TGCAGAAGAAAATGCCGTGCAGCAGTTAAGTCCAAC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCAATTTTCTCCTCTTTaGTCTCCTCCACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVQFSPL*SPPRLA
Trigger: AGCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTTCCGGCATGGGAACTaGCTTTTCCTTAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVFRHGN*LFLKVQ
Trigger: CTGCACCTTAAGGAAAAGGCAGTTCCCATGCCGGAA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATGTCAAAGTCAAACTTaGTGTTCTCCCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKCQSQT*CSPSFE
Trigger: CTCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGGAGGAAAGTTGCCCCTaGTGTCACTCTGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVEESCP*CHSDSR
Trigger: CCTACTATCAGAGTGACAGCAGGGGCAACTTTCCTC...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGACGTCTGAGGAAAGTTaGCCCTGCTGTCACTCTGAT +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVTSEES*PCCHSD
Trigger: ATCAGAGTGACAGCAGGGGCAACTTTCCTCAGACGT...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATGGCCCCATCAGCTTTaGTTGCTTGTTCTAAAATTG +
Preference number: 4 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVWPHQL*LLVLKL
Trigger: CAATTTTAGAACAAGCAACCAAAGCTGATGGGGCCA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACTTTCTCCCTCTCTTTaGAAAACTCCCCGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKLSPSL*KTPRSK
Trigger: TTTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAG...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGGTGTCTGGGTTGGAGTaGGGACTCTTATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVVSGLE*GLLSSF
Trigger: AAACGAGGATAAGAGTCCCCACTCCAACCCAGACAC...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGGTGGGCTCCCATAGTTaGAACCTCCAGGAGAAATGT +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVVGSHS*NLQEKC
Trigger: ACATTTCTCCTGGAGGTTCCAACTATGGGAGCCCAC...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR TCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGGCAGGTCCAGGATATTaGAGTAGTTTCGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVAGPGY*SSFGRK
Trigger: CTTTCTGCCGAAACTACTTCAATATCCTGGACCTGC...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAAGATCTTCTTCTAGTTaGTGCTTCTCTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKRSSSS*CFSRSF
Trigger: GAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGATCT...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATGGCCCCATCAGCTTTaGTTGCTTGTTCTAAAATTG +
Preference number: 4 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKWPHQL*LLVLKL
Trigger: CAATTTTAGAACAAGCAACCAAAGCTGATGGGGCCA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTACCACACTTTGTACTaGTGCTGGTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVYHTLY*CWFLGM
Trigger: CATCCCCAAGAACCAGCACCAGTACAAAGTGTGGTA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGATAGAGGGAGAGCATTaGGTATGTTCAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVIEGEH*VCSAGC
Trigger: ACACCCAGCTGAACATACCCAATGCTCTCCCTCTAT...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000220022.2
3UTR CAA 72 bp TCCTTAATTACCAATGGTTTCTCCCTACTTTTAACTTaGGTGTGTTTCTCCATGCTGGGAAATCCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: SLITNGFSLLLT*VCFSMLGNPRR
Trigger: TCTCCTAGGATTTCCCAGCATGGAGAAACACACCAAAGTTAAAAGTAGGGAGAAACCATTGGTAATTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR TCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGAGTCCAGGTAGCCTTTaGGATCTTCTTCTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVSPGSL*DLLLVA
Trigger: AGCAACTAGAAGAAGATCTCAAAGGCTACCTGGACT...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTCTTCTTCTAGTTGCTaGTTCTCTCGAAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVSSSSC*FSRSFW
Trigger: CCAGAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTGTCAAAGTCAAACTTaGTGTTCTCCCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVCQSQT*CSPSFE
Trigger: CTCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGACTTTGTACTGGTGCTaGTTCTTGGGGATGTACCTT +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVTLYWC*FLGMYL
Trigger: AAGGTACATCCCCAAGAACCAGCACCAGTACAAAGT...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR TCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGAGTTGTTGTTCCGATTaGTCTCTGTGGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVSCCSD*SLWCHS
Trigger: TGAATGACACCACAGAGATCAATCGGAACAACAACT...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGAGATCTTCTTCTAGTTaGTGCTTCTCTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVRSSSS*CFSRSF
Trigger: GAAGCTTCGAGAGAAGCAGCAACTAGAAGAAGATCT...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
3UTR CAA 72 bp GCCATCCATTTTTCAAAGACTATTTCTTCCCACAGGTaGTTCTTAACTGCTGTGATCACAGAGATGTATAAA +
Preference number: 4 (lower is better)
Translates to: AIHFSKTISSHR*FLTAVITEMYK
Trigger: TTTATACATCTCTGTGATCACAGCAGTTAAGAACAACCTGTGGGAAGAAATAGTCTTTGAAAAATGGATGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR GCA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTTGCTATATCAACAATaGTACCCACAACAATCAAGG +
Preference number: 4 (lower is better)
Translates to: IQSNQIRLKYANANVETVLLYQQ*YPQQSR
Trigger: CCTTGATTGTTGTGGGTAGCATTGTTGATATAGCAA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000219223.2
ENSMUST00000220022.2
CDS TCA 90 bp CTCGGACAGCAGGGGACAAGGGAGGCCCATGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAGCGGGATGGGGGAAGCGGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: LGQQGTREAHGPPQC*PCWSSQRDGGSGPG
Trigger: CCCTGGGCCGCTTCCCCCATCCCGCTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCCATGGGCCTCCCTTGTCCCCTGCTGTCCGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTGGTGATGCCGTGCTaGGGCCCATCCCACCCGGGT +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLVMPC*GPSHPG
Trigger: ACCCGGGTGGGATGGGCCCAAGCACGGCATCACCAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 90 bp GCCAGCACTGCCCATGAGCTTGGCCTGCCGGGCGGCATCGATGGCTaGCTGCCAGGACAGTGCTGCCCCTGGAGTAGGGATGTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: ASTAHELGLPGGIDG*LPGQCCPWSRDVLG
Trigger: CCCGAGCACATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGCAGGCCAAGCTCATGGGCAGTGCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATTGGTGATGCCGTGCTaGGGCCCATCCCACCCGGGT +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLVMPC*GPSHPG
Trigger: ACCCGGGTGGGATGGGCCCAAGCACGGCATCACCAA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTCTGGGGCACACTTCTaGCCTGGCATGCAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWSGAHF*PGMQAS
Trigger: GCTGGCCTGCATGCCAGGCAAGAAGTGTGCCCCAGA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 90 bp CTTGGCCTGCCGGGCGGCATCGATGGCTGCCTGCCAGGACAGTGCTaGCCCTGGAGTAGGGATGTGCTCGGGAGCAAGTCCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LGLPGGIDGCLPGQC*PWSRDVLGSKSCSC
Trigger: GCAGCTGCAGGACTTGCTCCCGAGCACATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGCAGGCCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS GCA 90 bp GAGCTTGGCCTGCCGGGCGGCATCGATGGCTGCCTGCCAGGACAGTaGTGCCCCTGGAGTAGGGATGTGCTCGGGAGCAAGTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ELGLPGGIDGCLPGQ*CPWSRDVLGSKSCS
Trigger: GCTGCAGGACTTGCTCCCGAGCACATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGCAGGCCAAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTTGGTGATGCCGTGCTaGGGCCCATCCCACCCGGGT +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGLVMPC*GPSHPG
Trigger: ACCCGGGTGGGATGGGCCCAAGCACGGCATCACCAA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTCTGGGGCACACTTCTaGCCTGGCATGCAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPSGAHF*PGMQAS
Trigger: GCTGGCCTGCATGCCAGGCAAGAAGTGTGCCCCAGA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATCCCCTTCCGTGCTGTaGCTGGGCTCAGACTCTGGG +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSPSVL*LGSDSG
Trigger: CCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGGA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 90 bp CTGCCGGGCGGCATCGATGGCTGCCTGCCAGGACAGTGCTGCCCCTaGAGTAGGGATGTGCTCGGGAGCAAGTCCTGCAGCTGCATTGGC +
Preference number: 5 (lower is better)
Translates to: LPGGIDGCLPGQCCP*SRDVLGSKSCSCIG
Trigger: GCCAATGCAGCTGCAGGACTTGCTCCCGAGCACATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCGTTCCAGGTTGGAGTaGGTGGCGTTGGAGTCGTCT +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWRSRLE*VALESS
Trigger: AGACGACTCCAACGCCACCAACTCCAACCTGGAACG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTTGGTGATGCCGTGCTaGGGCCCATCCCACCCGGGT +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLVMPC*GPSHPG
Trigger: ACCCGGGTGGGATGGGCCCAAGCACGGCATCACCAA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATCCGCATCAGCCAGGTaGTCCACCGCAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSASAR*STAMAK
Trigger: CTTGGCCATTGCGGTGGACAACCTGGCTGATGCGGA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCCTGCAGTGTCTGGGTaGGAGTGGGGACTCTTATCC +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWPAVSG*EWGLLS
Trigger: GGATAAGAGTCCCCACTCCAACCCAGACACTGCAGG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCGCAAGGGTCGGGCCTaGAGGGCATATTCCACACAT +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWRKGRA*RAYSTH
Trigger: ATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGCG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTTCCTTTGTGAGGGCTaGCCCACCAGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPFLCEG*PTSPCS
Trigger: AGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGAA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATTCCTTTGTGAGGGCTaGCCCACCAGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKFLCEG*PTSPCS
Trigger: AGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGAA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACGTTCCAGGTTGGAGTaGGTGGCGTTGGAGTCGTCT +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKRSRLE*VALESS
Trigger: AGACGACTCCAACGCCACCAACTCCAACCTGGAACG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATCCACTCGTTCCAGGTaGGAGTTGGTGGCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSTRSR*ELVALE
Trigger: CTCCAACGCCACCAACTCCAACCTGGAACGAGTGGA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATTGGTGATGCCGTGCTaGGGCCCATCCCACCCGGGT +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLLVMPC*GPSHPG
Trigger: ACCCGGGTGGGATGGGCCCAAGCACGGCATCACCAA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCCTGCAGTGTCTGGGTaGGAGTGGGGACTCTTATCC +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPPAVSG*EWGLLS
Trigger: GGATAAGAGTCCCCACTCCAACCCAGACACTGCAGG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCACATGCTTTAGCCCCTaGGCCCTGTTGATGGCCCTC +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPTCFSP*ALLMAL
Trigger: GAGGGCCATCAACAGGGCCAAGGGGCTAAAGCATGT...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGCCAGGCAGATGGTGTaGAGCAGGATGAGAACGAAC +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWARQMV*SRMRTN
Trigger: GTTCGTTCTCATCCTGCTCAACACCATCTGCCTGGC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTCCCCTTCCGTGCTGTaGCTGGGCTCAGACTCTGGG +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSSPSVL*LGSDSG
Trigger: CCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGGA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTTCCTTTGTGAGGGCTaGCCCACCAGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGFLCEG*PTSPCS
Trigger: AGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGAA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTGTTCCCTGTCTTGTaGATGTGCAGTGGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLFPVL*MCSGRW
Trigger: CCAGCGCCCACTGCACATCAACAAGACAGGGAACAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCTCTGGGCAGGTCAGTaGTCGGTGTTCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLWAGQ*SVFIFL
Trigger: CAGGAAGATGAACACCGACAACTGACCTGCCCAGAG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATTGGTGATGCCGTGCTaGGGCCCATCCCACCCGGGT +
Preference number: 5 (lower is better)
Translates to: GGWCDLHWLLPPASQLLALVMPC*GPSHPG
Trigger: ACCCGGGTGGGATGGGCCCAAGCACGGCATCACCAA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCTCATGTTTCGAGGCTaGTCTTCATCCATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLMFRG*SSSMPS
Trigger: CGAGGGCATGGATGAAGACAAGCCTCGAAACATGAG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCGGCTGAATTTGGATTaGGAGATCCGATGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWRLNLD*EIRWAS
Trigger: GCTTGCCCATCGGATCTCCAAATCCAAATTCAGCCG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTCCGCATCAGCCAGGTaGTCCACCGCAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRSASAR*STAMAK
Trigger: CTTGGCCATTGCGGTGGACAACCTGGCTGATGCGGA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTCAATTTTCTCCTCTTaGCTCTCCTCCACGGCTGGC +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWSIFSS*LSSTAG
Trigger: GCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTGA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCAAGGGTCGGGCCTaGAGGGCATATTCCACACAT +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGRKGRA*RAYSTH
Trigger: ATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGCG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCCAGGCAGATGGTGTaGAGCAGGATGAGAACGAAC +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKARQMV*SRMRTN
Trigger: GTTCGTTCTCATCCTGCTCAACACCATCTGCCTGGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTCTGGGGCACACTTCTaGCCTGGCATGCAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLSGAHF*PGMQAS
Trigger: GCTGGCCTGCATGCCAGGCAAGAAGTGTGCCCCAGA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATCTGGGGCACACTTCTaGCCTGGCATGCAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLSGAHF*PGMQAS
Trigger: GCTGGCCTGCATGCCAGGCAAGAAGTGTGCCCCAGA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATCCCCTTCCGTGCTGTaGCTGGGCTCAGACTCTGGG +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLSPSVL*LGSDSG
Trigger: CCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGGA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGAGGTTCCCTTCTGTTTaGATCCTCAGGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWRFPSV*ILRAVL
Trigger: CAGGACAGCCCTGAGGATCAAAACAGAAGGGAACCT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCCTCCTTCATAGCCTaGTCCAACTCCTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKASFIA*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGACAAGGCTATGAAGGAGGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCCCAGGGCAGTGTTGTaGGCATTGTTGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWPRAVL*ALLMLA
Trigger: TGCCAACATCAACAATGCCAACAACACTGCCCTGGG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCGGCCCAGGGCAGTGTaGTTGGCATTGTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPRPRAV*LALLML
Trigger: CAACATCAACAATGCCAACAACACTGCCCTGGGCCG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACTCTGGGCAGGTCAGTaGTCGGTGTTCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLWAGQ*SVFIFL
Trigger: CAGGAAGATGAACACCGACAACTGACCTGCCCAGAG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCTCTGGGCAGGTCAGTaGTCGGTGTTCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLWAGQ*SVFIFL
Trigger: CAGGAAGATGAACACCGACAACTGACCTGCCCAGAG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTCTCCATCTCCTCTATaGTCATGTCGCAGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWSPSPL*SCRRRQ
Trigger: CTGACGCCTGCGACATGACAATAGAGGAGATGGAGA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS TCA 90 bp CCGTGCTTGGGCCCATCCCACCCGGGTTTGCACACGGTCCCGTTCTaGCACTGTCGCCCATGGCCTGTCTCCAAAGCACAAGGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: PCLGPSHPGLHTVPF*HCRPWPVSKAQGEG
Trigger: TCCTTCCCCTTGTGCTTTGGAGACAGGCCATGGGCGACAGTGTCAGAACGGGACCGTGTGCAAACCCGGGTGGGATGGGCCCAAGCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 90 bp CTGGCTCTCTCGGGAGTGGCACCTCTTAGAGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGCAGGGGACAAGGGAGGCCCATGGCC +
Preference number: 5 (lower is better)
Translates to: LALSGVAPLRAELPC*LLYSDSRGQGRPMA
Trigger: GGCCATGGGCCTCCCTTGTCCCCTGCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGCTCTAAGAGGTGCCACTCCCGAGAGAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 90 bp GGTGCCGTTGGGGCTCTGCTGGGCGCCCCCACTGAGGATGTTGTCTaGGGCGTTCTCCATCTCCTCTATTGTCATGTCGCAGGCGTCAGC +
Preference number: 5 (lower is better)
Translates to: GAVGALLGAPTEDVV*GVLHLLYCHVAGVS
Trigger: GCTGACGCCTGCGACATGACAATAGAGGAGATGGAGAACGCCGCAGACAACATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 90 bp AGGGCATATGCGCAGCTCTCGTCCTCTGGGGCCACAGCCCTGTCCTaGCCCGGGTCCCTGCAGTTCACAAAAGGTAAGAGGGTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: RAYAQLSSSGATALS*PGSLQFTKGKRVPL
Trigger: CAACGGCACCCTCTTACCTTTTGTGAACTGCAGGGACCCGGGGCAGGACAGGGCTGTGGCCCCAGAGGACGAGAGCTGCGCATATGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTTGGAGTTGGTGGCGTaGGAGTCGTCTTCCGGAAAG +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGLELVA*ESSSGK
Trigger: CTTTCCGGAAGACGACTCCAACGCCACCAACTCCAA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCGTTCCAGGTTGGAGTaGGTGGCGTTGGAGTCGTCT +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSRSRLE*VALESS
Trigger: AGACGACTCCAACGCCACCAACTCCAACCTGGAACG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTCCACTCGTTCCAGGTaGGAGTTGGTGGCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSSTRSR*ELVALE
Trigger: CTCCAACGCCACCAACTCCAACCTGGAACGAGTGGA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATTCCCTCCTAGAGCATaGGCCCCATCAGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKFPPRA*APSALV
Trigger: AACCAAAGCTGATGGGGCCAATGCTCTAGGAGGGAA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGCTTTCTCCCTCTCTTaGGAAAACTCCCCGCTCAAA +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWAFSLS*ENSPLK
Trigger: TTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAGC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCGGCTGAATTTGGATTaGGAGATCCGATGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPRLNLD*EIRWAS
Trigger: GCTTGCCCATCGGATCTCCAAATCCAAATTCAGCCG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATCCGCATCAGCCAGGTaGTCCACCGCAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLSASAR*STAMAK
Trigger: CTTGGCCATTGCGGTGGACAACCTGGCTGATGCGGA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATCAATTTTCTCCTCTTaGCTCTCCTCCACGGCTGGC +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSIFSS*LSSTAG
Trigger: GCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTGA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTCAATTTTCTCCTCTTaGCTCTCCTCCACGGCTGGC +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPSIFSS*LSSTAG
Trigger: GCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTGA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCTGCAGTGTCTGGGTaGGAGTGGGGACTCTTATCC +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPAVSG*EWGLLS
Trigger: GGATAAGAGTCCCCACTCCAACCCAGACACTGCAGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCACATGCTTTAGCCCCTaGGCCCTGTTGATGGCCCTC +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSTCFSP*ALLMAL
Trigger: GAGGGCCATCAACAGGGCCAAGGGGCTAAAGCATGT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCGCAAGGGTCGGGCCTaGAGGGCATATTCCACACAT +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSRKGRA*RAYSTH
Trigger: ATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGCG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATACTGGTGCTGGTTCTaGGGGATGTACCTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKYWCWF*GMYLRK
Trigger: CTTGCGAAGGTACATCCCCAAGAACCAGCACCAGTA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGACCACGTACCACACTTaGTACTGGTGCTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWTTYHT*YWCWFL
Trigger: CAAGAACCAGCACCAGTACAAAGTGTGGTACGTGGT...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCCAGGCAGATGGTGTaGAGCAGGATGAGAACGAAC +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGARQMV*SRMRTN
Trigger: GTTCGTTCTCATCCTGCTCAACACCATCTGCCTGGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTCTGGGGCACACTTCTaGCCTGGCATGCAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQSGAHF*PGMQAS
Trigger: GCTGGCCTGCATGCCAGGCAAGAAGTGTGCCCCAGA...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATCTGGGGCACACTTCTaGCCTGGCATGCAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GGWCDLHWLLPPASQLLASGAHF*PGMQAS
Trigger: GCTGGCCTGCATGCCAGGCAAGAAGTGTGCCCCAGA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATCCCCTTCCGTGCTGTaGCTGGGCTCAGACTCTGGG +
Preference number: 5 (lower is better)
Translates to: GGWCDLHWLLPPASQLLASPSVL*LGSDSG
Trigger: CCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGGA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATGTTTGATCCGACCCTaGGCTTCAGGGTCATACTCG +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKCLIRP*ASGSYS
Trigger: CGAGTATGACCCTGAAGCCAAGGGTCGGATCAAACA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAAGGTTCCCTTCTGTTTaGATCCTCAGGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKRFPSV*ILRAVL
Trigger: CAGGACAGCCCTGAGGATCAAAACAGAAGGGAACCT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCTCTTCCAGATTTTCTaGATGATGGCCCGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLFQIF*MMARSS
Trigger: GGAGCTTCGGGCCATCATCAAGAAAATCTGGAAGAG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATTCCTTTGTGAGGGCTaGCCCACCAGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLFLCEG*PTSPCS
Trigger: AGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGAA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGCCTCCTTCATAGCCTaGTCCAACTCCTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGASFIA*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGACAAGGCTATGAAGGAGGC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGGCCCAGGGCAGTGTaGTTGGCATTGTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGRPRAV*LALLML
Trigger: CAACATCAACAATGCCAACAACACTGCCCTGGGCCG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGATGGGAAGCTGCTGTaGAGTTTCTCGCTGGACTCT +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKDGKLL*SFSLDS
Trigger: AGAGTCCAGCGAGAAACTCAACAGCAGCTTCCCATC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGGATGAACTTGGGATCTaGAGCAAACTGTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWDELGI*SKLSQS
Trigger: GGACTGGGACAGTTTGCTCAAGATCCCAAGTTCATC...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATCTCCATCTCCTCTATaGTCATGTCGCAGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSPSPL*SCRRRQ
Trigger: CTGACGCCTGCGACATGACAATAGAGGAGATGGAGA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACATAGAGGGAGAGCATaGGGTATGTTCAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKHRGRA*GMFSWV
Trigger: CACCCAGCTGAACATACCCAATGCTCTCCCTCTATG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000220022.2
CDS GCA 90 bp ATACTGCTGCCGCTTCCGCTGTGTGGAACTGACGGTAGAGATGGTTaGGTTGCCAGCACTGCCCATGAGCTTGGCCTGCCGGGCGGCATC +
Preference number: 5 (lower is better)
Translates to: ILLPLPLCGTDGRDG*VASTAHELGLPGGI
Trigger: GATGCCGCCCGGCAGGCCAAGCTCATGGGCAGTGCTGGCAACGCAACCATCTCTACCGTCAGTTCCACACAGCGGAAGCGGCAGCAGTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS GCA 90 bp TCCCTGGCTCTCTCGGGAGTGGCACCTCTTAGAGCTGAGCTTCCATaGTGCCTCCTGTACTCGGACAGCAGGGGACAAGGGAGGCCCATG +
Preference number: 5 (lower is better)
Translates to: SLALSGVAPLRAELP*CLLYSDSRGQGRPM
Trigger: CATGGGCCTCCCTTGTCCCCTGCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGCTCTAAGAGGTGCCACTCCCGAGAGAGCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCCATAGTTGGAACCTaGGTGGTTTTCCTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPIVGT*VVFLWN
Trigger: GTTCCAGAGGAAAACCACCAAGGTTCCAACTATGGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000188522.7
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACGTTCCAGGTTGGAGTaGGTGGCGTTGGAGTCGTCT +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLRSRLE*VALESS
Trigger: AGACGACTCCAACGCCACCAACTCCAACCTGGAACG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTTGGTGATGCCGTGCTaGGGCCCATCCCACCCGGGT +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPLVMPC*GPSHPG
Trigger: ACCCGGGTGGGATGGGCCCAAGCACGGCATCACCAA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAAAATCTCCTCGGGCTTaGGCTTTCTCCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKKSPRA*AFSLSL
Trigger: CAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATTT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCTCATGTTTCGAGGCTaGTCTTCATCCATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGLMFRG*SSSMPS
Trigger: CGAGGGCATGGATGAAGACAAGCCTCGAAACATGAG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGGCTGAATTTGGATTaGGAGATCCGATGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGRLNLD*EIRWAS
Trigger: GCTTGCCCATCGGATCTCCAAATCCAAATTCAGCCG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTTATTGGCTGTGTCTaGCACTTCTGTGAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWFIGCV*HFCEPV
Trigger: CACTGGCTCACAGAAGTGCAAGACACAGCCAATAAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTCCGCATCAGCCAGGTaGTCCACCGCAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQSASAR*STAMAK
Trigger: CTTGGCCATTGCGGTGGACAACCTGGCTGATGCGGA...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTACTGGTGCTGGTTCTaGGGGATGTACCTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGYWCWF*GMYLRK
Trigger: CTTGCGAAGGTACATCCCCAAGAACCAGCACCAGTA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGCCAGGCAGATGGTGTaGAGCAGGATGAGAACGAAC +
Preference number: 5 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRARQMV*SRMRTN
Trigger: GTTCGTTCTCATCCTGCTCAACACCATCTGCCTGGC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCCAGGCAGATGGTGTaGAGCAGGATGAGAACGAAC +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSARQMV*SRMRTN
Trigger: GTTCGTTCTCATCCTGCTCAACACCATCTGCCTGGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGCATAGAGGGAGAGCATaGGGTATGTTCAGCTGGATT +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWHRGRA*GMFSWI
Trigger: AATCCAGCTGAACATACCCAATGCTCTCCCTCTATG...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGAGGTTCCCTTCTGTTTaGATCCTCAGGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGRFPSV*ILRAVL
Trigger: CAGGACAGCCCTGAGGATCAAAACAGAAGGGAACCT...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACTCTTCCAGATTTTCTaGATGATGGCCCGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLFQIF*MMARSS
Trigger: GGAGCTTCGGGCCATCATCAAGAAAATCTGGAAGAG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTTCCTTTGTGAGGGCTaGCCCACCAGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQFLCEG*PTSPCS
Trigger: AGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGAA...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTTGTTCCCTGTCTTGTaGATGTGCAGTGGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRLFPVL*MCSGRW
Trigger: CCAGCGCCCACTGCACATCAACAAGACAGGGAACAA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCCCAGGGCAGTGTTGTaGGCATTGTTGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGPRAVL*ALLMLA
Trigger: TGCCAACATCAACAATGCCAACAACACTGCCCTGGG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCGGCCCAGGGCAGTGTaGTTGGCATTGTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRRPRAV*LALLML
Trigger: CAACATCAACAATGCCAACAACACTGCCCTGGGCCG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCGGCCCAGGGCAGTGTaGTTGGCATTGTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSRPRAV*LALLML
Trigger: CAACATCAACAATGCCAACAACACTGCCCTGGGCCG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCTCTGGGCAGGTCAGTaGTCGGTGTTCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLWAGQ*SVFIFL
Trigger: CAGGAAGATGAACACCGACAACTGACCTGCCCAGAG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCGATGAACTTGGGATCTaGAGCAAACTGTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPDELGI*SKLSQS
Trigger: GGACTGGGACAGTTTGCTCAAGATCCCAAGTTCATC...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTCTCCATCTCCTCTATaGTCATGTCGCAGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGSPSPL*SCRRRQ
Trigger: CTGACGCCTGCGACATGACAATAGAGGAGATGGAGA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCATAGAGGGAGAGCATaGGGTATGTTCAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGHRGRA*GMFSWV
Trigger: CACCCAGCTGAACATACCCAATGCTCTCCCTCTATG...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000220022.2
CDS GCA 90 bp GGACAGTGCTGCCCCTGGAGTAGGGATGTGCTCGGGAGCAAGTCCTaGAGCTGCATTGGCATTCATGTTGGCATGAGCTGGGCGTGGGCT +
Preference number: 5 (lower is better)
Translates to: GQCCPWSRDVLGSKS*SCIGIHVGMSWAWA
Trigger: AGCCCACGCCCAGCTCATGCCAACATGAATGCCAATGCAGCTGCAGGACTTGCTCCCGAGCACATCCCTACTCCAGGGGCAGCACTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS-3UTR CAA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTTGGAGTTGGTGGCGTaGGAGTCGTCTTCCGGAAAG +
Preference number: 5 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLLELVA*ESSSGK
Trigger: CTTTCCGGAAGACGACTCCAACGCCACCAACTCCAA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CAA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCACGTTCCAGGTTGGAGTaGGTGGCGTTGGAGTCGTCT +
Preference number: 5 (lower is better)
Translates to: GGWCDLHWLLPPASQLLARSRLE*VALESS
Trigger: AGACGACTCCAACGCCACCAACTCCAACCTGGAACG...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTTCCCTCCTAGAGCATaGGCCCCATCAGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSFPPRA*APSALV
Trigger: AACCAAAGCTGATGGGGCCAATGCTCTAGGAGGGAA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTTGGTGATGCCGTGCTaGGGCCCATCCCACCCGGGT +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVLVMPC*GPSHPG
Trigger: ACCCGGGTGGGATGGGCCCAAGCACGGCATCACCAA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCTCATGTTTCGAGGCTaGTCTTCATCCATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLMFRG*SSSMPS
Trigger: CGAGGGCATGGATGAAGACAAGCCTCGAAACATGAG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATTTATTGGCTGTGTCTaGCACTTCTGTGAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKFIGCV*HFCEPV
Trigger: CACTGGCTCACAGAAGTGCAAGACACAGCCAATAAA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTGGAGGTCATCCATGTaGATCTTGGTAGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSWRSSM*ILVVGG
Trigger: CCCACCCACTACCAAGATCAACATGGATGACCTCCA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTGGAGGTCATCCATGTaGATCTTGGTAGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRWRSSM*ILVVGG
Trigger: CCCACCCACTACCAAGATCAACATGGATGACCTCCA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCAAAATCTTCACAACGTaGATCGCGCTGGACTGGATG +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPKIFTT*IALDWM
Trigger: CATCCAGTCCAGCGCGATCAACGTTGTGAAGATTTT...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTACATGCTTTAGCCCCTaGGCCCTGTTGATGGCCCTC +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLTCFSP*ALLMAL
Trigger: GAGGGCCATCAACAGGGCCAAGGGGCTAAAGCATGT...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGCGCTGGTTGTCAAAGTCAAACTaGCTGTTCTCCCAGCTTCGA +
Preference number: 5 (lower is better)
Translates to: PALLGTSQPPPGSYWGRWLSKSN*LFSQLR
Trigger: TCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACAA...CCAGCGCCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTACTGGTGCTGGTTCTaGGGGATGTACCTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRYWCWF*GMYLRK
Trigger: CTTGCGAAGGTACATCCCCAAGAACCAGCACCAGTA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGACCACGTACCACACTTaGTACTGGTGCTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGTTYHT*YWCWFL
Trigger: CAAGAACCAGCACCAGTACAAAGTGTGGTACGTGGT...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCATATTCATGGCGATTTaGAAGAGGCAGCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPIFMAI*KRQLWP
Trigger: TGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATAT...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTCTGGGGCACACTTCTaGCCTGGCATGCAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPSGAHF*PGMQAS
Trigger: GCTGGCCTGCATGCCAGGCAAGAAGTGTGCCCCAGA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTCCCCTTCCGTGCTGTaGCTGGGCTCAGACTCTGGG +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPSPSVL*LGSDSG
Trigger: CCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGGA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGACCACATCCAAGTGTTaGATCCGACCCTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGTTSKC*IRPLAS
Trigger: TGAAGCCAAGGGTCGGATCAAACACTTGGATGTGGT...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGCCTCCTTCATAGCCTaGTCCAACTCCTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLASFIA*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGACAAGGCTATGAAGGAGGC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATCAGTGTCAGCTTGGTaGTTCCCTGTCTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKSVSAW*FPVLLM
Trigger: CATCAACAAGACAGGGAACAACCAAGCTGACACTGA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAGCAGTGTTGTTGGCATaGTTGATGTTGGCATTGGAG +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKAVLLA*LMLALE
Trigger: CTCCAATGCCAACATCAACAATGCCAACAACACTGC...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCCCAGGGCAGTGTTGTaGGCATTGTTGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRPRAVL*ALLMLA
Trigger: TGCCAACATCAACAATGCCAACAACACTGCCCTGGG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCCAGGGCAGTGTTGTaGGCATTGTTGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPRAVL*ALLMLA
Trigger: TGCCAACATCAACAATGCCAACAACACTGCCCTGGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGATGGGAAGCTGCTGTaGAGTTTCTCGCTGGACTCT +
Preference number: 5 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRDGKLL*SFSLDS
Trigger: AGAGTCCAGCGAGAAACTCAACAGCAGCTTCCCATC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGTCTCCATCTCCTCTATaGTCATGTCGCAGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRSPSPL*SCRRRQ
Trigger: CTGACGCCTGCGACATGACAATAGAGGAGATGGAGA...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTCTCCATCTCCTCTATaGTCATGTCGCAGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSSPSPL*SCRRRQ
Trigger: CTGACGCCTGCGACATGACAATAGAGGAGATGGAGA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 90 bp TGCTGCCCCTGGAGTAGGGATGTGCTCGGGAGCAAGTCCTGCAGCTaGATTGGCATTCATGTTGGCATGAGCTGGGCGTGGGCTCCCATA +
Preference number: 5 (lower is better)
Translates to: CCPWSRDVLGSKSCS*IGIHVGMSWAWAPI
Trigger: TATGGGAGCCCACGCCCAGCTCATGCCAACATGAATGCCAATGCAGCTGCAGGACTTGCTCCCGAGCACATCCCTACTCCAGGGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS GCA 90 bp TCGATGGCTGCCTGCCAGGACAGTGCTGCCCCTGGAGTAGGGATGTaGTCGGGAGCAAGTCCTGCAGCTGCATTGGCATTCATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: SMAACQDSAAPGVGM*SGASPAAALAFMLA
Trigger: TGCCAACATGAATGCCAATGCAGCTGCAGGACTTGCTCCCGAGCACATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCAGCCATCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS CCA 90 bp GCTGGGTTCCCAGGGCTCTGGAAATCAGGGTGGATAAGACGTGGGTaGCTAGAGGGGGAGCCACAGAAGCTGGAAATGTGGTCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: AGFPGLWKSGWIRRG*LEGEPQKLEMWSGG
Trigger: CCCTCCAGACCACATTTCCAGCTTCTGTGGCTCCCCCTCTAGCCACCCACGTCTTATCCACCCTGATTTCCAGAGCCCTGGGAACCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112793.10
ENSMUST00000220022.2
CDS CCA 90 bp CTGGGCTGGGTTCCCAGGGCTCTGGAAATCAGGGTGGATAAGACGTaGGTGGCTAGAGGGGGAGCCACAGAAGCTGGAAATGTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LGWVPRALEIRVDKT*VARGGATEAGNVVW
Trigger: CCAGACCACATTTCCAGCTTCTGTGGCTCCCCCTCTAGCCACCCACGTCTTATCCACCCTGATTTCCAGAGCCCTGGGAACCCAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112793.10
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCCATAGTTGGAACCTaGGTGGTTTTCCTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPIVGT*VVFLWN
Trigger: GTTCCAGAGGAAAACCACCAAGGTTCCAACTATGGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000188522.7
CDS-3UTR CAA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATTGGAGTTGGTGGCGTaGGAGTCGTCTTCCGGAAAG +
Preference number: 5 (lower is better)
Translates to: GGWCDLHWLLPPASQLLALELVA*ESSSGK
Trigger: CTTTCCGGAAGACGACTCCAACGCCACCAACTCCAA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAACCCCATCAGCTTTGGTaGCTTGTTCTAAAATTGCAC +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKPHQLW*LVLKLH
Trigger: GTGCAATTTTAGAACAAGCAACCAAAGCTGATGGGG...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATTCCCTCCTAGAGCATaGGCCCCATCAGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLFPPRA*APSALV
Trigger: AACCAAAGCTGATGGGGCCAATGCTCTAGGAGGGAA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGCTTTCTCCCTCTCTTaGGAAAACTCCCCGCTCAAA +
Preference number: 5 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRAFSLS*ENSPLK
Trigger: TTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAGC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCTTTCTCCCTCTCTTaGGAAAACTCCCCGCTCAAA +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSAFSLS*ENSPLK
Trigger: TTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTCATGTTTCGAGGCTaGTCTTCATCCATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLLMFRG*SSSMPS
Trigger: CGAGGGCATGGATGAAGACAAGCCTCGAAACATGAG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTTTATTGGCTGTGTCTaGCACTTCTGTGAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGFIGCV*HFCEPV
Trigger: CACTGGCTCACAGAAGTGCAAGACACAGCCAATAAA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTGCATCTCATCGAAATaGAACTTCCCTCCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPCISSK*NFPPKS
Trigger: GCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGCA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTCCGCATCAGCCAGGTaGTCCACCGCAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPSASAR*STAMAK
Trigger: CTTGGCCATTGCGGTGGACAACCTGGCTGATGCGGA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATCAATTTTCTCCTCTTaGCTCTCCTCCACGGCTGGC +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLSIFSS*LSSTAG
Trigger: GCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTGA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTGGAGGTCATCCATGTaGATCTTGGTAGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLWRSSM*ILVVGG
Trigger: CCCACCCACTACCAAGATCAACATGGATGACCTCCA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGTGAAGATCGTGTCATaGACAATACGGTGGCACTGC +
Preference number: 5 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRVKIVS*TIRWHC
Trigger: GCAGTGCCACCGTATTGTCAATGACACGATCTTCAC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATTGTCAAAGTCAAACTaGCTGTTCTCCCAGCTTCGA +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLSKSN*LFSQLR
Trigger: TCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACAA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATACTGGTGCTGGTTCTaGGGGATGTACCTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLYWCWF*GMYLRK
Trigger: CTTGCGAAGGTACATCCCCAAGAACCAGCACCAGTA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTACTGGTGCTGGTTCTaGGGGATGTACCTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLYWCWF*GMYLRK
Trigger: CTTGCGAAGGTACATCCCCAAGAACCAGCACCAGTA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCACCACGTACCACACTTaGTACTGGTGCTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSTTYHT*YWCWFL
Trigger: CAAGAACCAGCACCAGTACAAAGTGTGGTACGTGGT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGGGGAACGTCTGGAAGTaGTTGTTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGGNVWK*LFRLIS
Trigger: AGAGATCAATCGGAACAACAACTTCCAGACGTTCCC...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
60% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTCTGGGGCACACTTCTaGCCTGGCATGCAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSGAHF*PGMQAS
Trigger: GCTGGCCTGCATGCCAGGCAAGAAGTGTGCCCCAGA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTCCCCTTCCGTGCTGTaGCTGGGCTCAGACTCTGGG +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSPSVL*LGSDSG
Trigger: CCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGGA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATGTTTGATCCGACCCTaGGCTTCAGGGTCATACTCG +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLCLIRP*ASGSYS
Trigger: CGAGTATGACCCTGAAGCCAAGGGTCGGATCAAACA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGACCACATCCAAGTGTTaGATCCGACCCTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRTTSKC*IRPLAS
Trigger: TGAAGCCAAGGGTCGGATCAAACACTTGGATGTGGT...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCTCTTCCAGATTTTCTaGATGATGGCCCGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLFQIF*MMARSS
Trigger: GGAGCTTCGGGCCATCATCAAGAAAATCTGGAAGAG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATTCCTTTGTGAGGGCTaGCCCACCAGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKFLCEG*PTSPCS
Trigger: AGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGAA...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGGCCTCCTTCATAGCCTaGTCCAACTCCTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQASFIA*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGACAAGGCTATGAAGGAGGC...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCATTGTTCCCTGTCTTGTaGATGTGCAGTGGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: GGWCDLHWLLPPASQLLALFPVL*MCSGRW
Trigger: CCAGCGCCCACTGCACATCAACAAGACAGGGAACAA...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACCCAGGGCAGTGTTGTaGGCATTGTTGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLPRAVL*ALLMLA
Trigger: TGCCAACATCAACAATGCCAACAACACTGCCCTGGG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCGGCCCAGGGCAGTGTaGTTGGCATTGTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLRPRAV*LALLML
Trigger: CAACATCAACAATGCCAACAACACTGCCCTGGGCCG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCACTCTGGGCAGGTCAGTaGTCGGTGTTCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: GGWCDLHWLLPPASQLLALWAGQ*SVFIFL
Trigger: CAGGAAGATGAACACCGACAACTGACCTGCCCAGAG...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCTCTGGGCAGGTCAGTaGTCGGTGTTCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQLWAGQ*SVFIFL
Trigger: CAGGAAGATGAACACCGACAACTGACCTGCCCAGAG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGATGGGAAGCTGCTGTaGAGTTTCTCGCTGGACTCT +
Preference number: 5 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLDGKLL*SFSLDS
Trigger: AGAGTCCAGCGAGAAACTCAACAGCAGCTTCCCATC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGGATGAACTTGGGATCTaGAGCAAACTGTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRDELGI*SKLSQS
Trigger: GGACTGGGACAGTTTGCTCAAGATCCCAAGTTCATC...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGATGAACTTGGGATCTaGAGCAAACTGTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSDELGI*SKLSQS
Trigger: GGACTGGGACAGTTTGCTCAAGATCCCAAGTTCATC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCCTCTGTTTCGAGGCTaGTCTTCATCCATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLPLFRG*SSSMPS
Trigger: CGAGGGCATGGATGAAGACAAGCCTCGAAACAGAGG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112825.9
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTGTACCACCTTGCCCTaGAACTTCCTCTCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSCTTLP*NFLSVS
Trigger: GGAAACAGAGAGGAAGTTCAAGGGCAAGGTGGTACA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGCTTCATGTACCACCTaGCCCTTGAACTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSASCTT*PLNFLS
Trigger: AGAGAGGAAGTTCAAGGGCAAGGTGGTACATGAAGC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
CDS TCA 90 bp TCATGGTGTCGGAAGCTGAGGGCCAGAGAGGCCCTCTACGGAGGCTaGCTTCAGGACTCAGGTTGGAGTTGGTGGCGTTGGAGTCGTCTT +
Preference number: 5 (lower is better)
Translates to: SWCRKLRAREALYGG*LQDSGWSWWRWSRL
Trigger: AAGACGACTCCAACGCCACCAACTCCAACCTGAGTCCTGAAGTCAGCCTCCGTAGAGGGCCTCTCTGGCCCTCAGCTTCCGACACCATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239204.2
CDS CCA 90 bp GTGGAGTCCACCAGCTTCTCATGGGACGGTGACTCAGTGTCAGCTTaGTTGTTCCCTGTCTTGTTGATGTGCAGTGGGCGCTGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: VESTSFSWDGDSVSA*LFPVLLMCSGRWVA
Trigger: CGCCACCCAGCGCCCACTGCACATCAACAAGACAGGGAACAACCAAGCTGACACTGAGTCACCGTCCCATGAGAAGCTGGTGGACTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 90 bp AAGGCACACAACGGACATGGTGGCCACATGCAATGGGAGCTGGGCTaGGTTCCCAGGGCTCTGGAAATCAGGGTGGATAAGACGTGGGTG +
Preference number: 5 (lower is better)
Translates to: KAHNGHGGHMQWELG*VPRALEIRVDKTWV
Trigger: CACCCACGTCTTATCCACCCTGATTTCCAGAGCCCTGGGAACCCAGCCCAGCTCCCATTGCATGTGGCCACCATGTCCGTTGTGTGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112793.10
ENSMUST00000220022.2
CDS CCA 90 bp GGATGTGCTCGGGAGCAAGTCCTGCAGCTGCATTGGCATTCATGTTaGCATGAGCTGGGCGTGGGCTCCCATAGTTGGAACCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: GCAREQVLQLHWHSC*HELGVGSHSWNLQE
Trigger: CTCCTGGAGGTTCCAACTATGGGAGCCCACGCCCAGCTCATGCCAACATGAATGCCAATGCAGCTGCAGGACTTGCTCCCGAGCACATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATCCACTCGTTCCAGGTaGGAGTTGGTGGCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKSTRSR*ELVALE
Trigger: CTCCAACGCCACCAACTCCAACCTGGAACGAGTGGA...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAATTGGCCCCATCAGCTTaGGTTGCTTGTTCTAAAATT +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKLAPSA*VACSKI
Trigger: AATTTTAGAACAAGCAACCAAAGCTGATGGGGCCAA...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCTTGGCCCCATCAGCTTaGGTTGCTTGTTCTAAAATT +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPLAPSA*VACSKI
Trigger: AATTTTAGAACAAGCAACCAAAGCTGATGGGGCCAA...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCAAATCTCCTCGGGCTTaGGCTTTCTCCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLKSPRA*AFSLSL
Trigger: CAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATTT...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCGGCTGAATTTGGATTaGGAGATCCGATGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQRLNLD*EIRWAS
Trigger: GCTTGCCCATCGGATCTCCAAATCCAAATTCAGCCG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCACGGCTGAATTTGGATTaGGAGATCCGATGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: GGWCDLHWLLPPASQLLARLNLD*EIRWAS
Trigger: GCTTGCCCATCGGATCTCCAAATCCAAATTCAGCCG...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTCAATTTTCTCCTCTTaGCTCTCCTCCACGGCTGGC +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQSIFSS*LSSTAG
Trigger: GCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTGA...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTGGAGGTCATCCATGTaGATCTTGGTAGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLWRSSM*ILVVGG
Trigger: CCCACCCACTACCAAGATCAACATGGATGACCTCCA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACCTGCAGTGTCTGGGTaGGAGTGGGGACTCTTATCC +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKPAVSG*EWGLLS
Trigger: GGATAAGAGTCCCCACTCCAACCCAGACACTGCAGG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAGTGAAGATCGTGTCATaGACAATACGGTGGCACTGC +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLVKIVS*TIRWHC
Trigger: GCAGTGCCACCGTATTGTCAATGACACGATCTTCAC...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCAAAATCTTCACAACGTaGATCGCGCTGGACTGGATG +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSKIFTT*IALDWM
Trigger: CATCCAGTCCAGCGCGATCAACGTTGTGAAGATTTT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGAAAATCTTCACAACGTaGATCGCGCTGGACTGGATG +
Preference number: 5 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRKIFTT*IALDWM
Trigger: CATCCAGTCCAGCGCGATCAACGTTGTGAAGATTTT...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGACATGCTTTAGCCCCTaGGCCCTGTTGATGGCCCTC +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPTCFSP*ALLMAL
Trigger: GAGGGCCATCAACAGGGCCAAGGGGCTAAAGCATGT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCCGCGGAAGGTGCTGGAGCCCCCGCACCACGGCCTTGGCCTTCTCCCCTGAAAATGGCTGCCAAAACATaGTCAAAGTCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: AAEGAGAPAPRPWPSPLKMAAKT*SKSNLL
Trigger: CAGCAAGTTTGACTTTGACAATGTTTTGGCAGCCAT...TTTCAGGGGAGAAGGCCAAGGCCGTGGTGCGGGGGCTCCAGCACCTTCCGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCATGGCTGCCAAAACATaGTCAAAGTCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPMAAKT*SKSNLL
Trigger: CAGCAAGTTTGACTTTGACAATGTTTTGGCAGCCAT...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCGCAAGGGTCGGGCCTaGAGGGCATATTCCACACAT +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPRKGRA*RAYSTH
Trigger: ATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGCG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACGCAAGGGTCGGGCCTaGAGGGCATATTCCACACAT +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKRKGRA*RAYSTH
Trigger: ATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGCG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAACCACGTACCACACTTaGTACTGGTGCTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLTTYHT*YWCWFL
Trigger: CAAGAACCAGCACCAGTACAAAGTGTGGTACGTGGT...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCATATTCATGGCGATTTaGAAGAGGCAGCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSIFMAI*KRQLWP
Trigger: TGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATAT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCCCGGTGAAAAGCATGTaGAGTATATTCATGGCGATT +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPPVKSM*SIFMAI
Trigger: AATCGCCATGAATATACTCAACATGCTTTTCACCGG...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCGGCTCCTACTGGGGGCGCTGGCCCATTCCTGCCATAGATCCCTGGGGCCCAAGTTGTTGTTCCGATaGATCTCTGTGGTGTCATTC +
Preference number: 5 (lower is better)
Translates to: SRLLLGALAHSCHRSLGPKLLFR*ISVVSF
Trigger: GAATGACACCACAGAGATCAATCGGAACAACAACTT...GGGCCCCAGGGATCTATGGCAGGAATGGGCCAGCGCCCCCAGTAGGAGCCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCGGGAACGTCTGGAAGTaGTTGTTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSGNVWK*LFRLIS
Trigger: AGAGATCAATCGGAACAACAACTTCCAGACGTTCCC...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTCTGGGGCACACTTCTaGCCTGGCATGCAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVSGAHF*PGMQAS
Trigger: GCTGGCCTGCATGCCAGGCAAGAAGTGTGCCCCAGA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTGTTTGATCCGACCCTaGGCTTCAGGGTCATACTCG +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLCLIRP*ASGSYS
Trigger: CGAGTATGACCCTGAAGCCAAGGGTCGGATCAAACA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTAACCACATCCAAGTGTTaGATCCGACCCTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLTTSKC*IRPLAS
Trigger: TGAAGCCAAGGGTCGGATCAAACACTTGGATGTGGT...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCACCACATCCAAGTGTTaGATCCGACCCTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLTTSKC*IRPLAS
Trigger: TGAAGCCAAGGGTCGGATCAAACACTTGGATGTGGT...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAAGGTTCCCTTCTGTTTaGATCCTCAGGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: GGWCDLHWLLPPASQLLARFPSV*ILRAVL
Trigger: CAGGACAGCCCTGAGGATCAAAACAGAAGGGAACCT...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTAGGTTCCCTTCTGTTTaGATCCTCAGGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLRFPSV*ILRAVL
Trigger: CAGGACAGCCCTGAGGATCAAAACAGAAGGGAACCT...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTCTTCCAGATTTTCTaGATGATGGCCCGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLLFQIF*MMARSS
Trigger: GGAGCTTCGGGCCATCATCAAGAAAATCTGGAAGAG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCCCAGGGCAGTGTTGTaGGCATTGTTGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLPRAVL*ALLMLA
Trigger: TGCCAACATCAACAATGCCAACAACACTGCCCTGGG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCGATGAACTTGGGATCTaGAGCAAACTGTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLDELGI*SKLSQS
Trigger: GGACTGGGACAGTTTGCTCAAGATCCCAAGTTCATC...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTCTCCATCTCCTCTATaGTCATGTCGCAGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLSPSPL*SCRRRQ
Trigger: CTGACGCCTGCGACATGACAATAGAGGAGATGGAGA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 90 bp GGATGTGCTCGGGAGCAAGTCCTGCAGCTGCATTGGCATTCATGTTaGCATGAGCTGGGCGTGGGCTCCCATAGTTGGAACCTTGGTGGT +
Preference number: 5 (lower is better)
Translates to: GCAREQVLQLHWHSC*HELGVGSHSWNLGG
Trigger: ACCACCAAGGTTCCAACTATGGGAGCCCACGCCCAGCTCATGCCAACATGAATGCCAATGCAGCTGCAGGACTTGCTCCCGAGCACATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000187317.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
CDS-3UTR CAA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCACCCATAGTTGGAACCTaGGTGGTTTTCCTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAPIVGT*VVFLWN
Trigger: GTTCCAGAGGAAAACCACCAAGGTTCCAACTATGGG...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
CDS-3UTR CAA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGGCACTGCCCATGAGCTaGGCCTGCCGGGCGGCATCG +
Preference number: 5 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWALPMS*ACRAAS
Trigger: CGATGCCGCCCGGCAGGCCAAGCTCATGGGCAGTGC...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTCCACTCGTTCCAGGTaGGAGTTGGTGGCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSTRSR*ELVALE
Trigger: CTCCAACGCCACCAACTCCAACCTGGAACGAGTGGA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CAA 90 bp ACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACTGGGGGTTGGCCCCATCAGCTTaGGTTGCTTGTTCTAAAATT +
Preference number: 5 (lower is better)
Translates to: TRPALLGTSQPPPGSYWGLAPSA*VACSKI
Trigger: AATTTTAGAACAAGCAACCAAAGCTGATGGGGCCAA...CCCCCAGTAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGAAATCTCCTCGGGCTTaGGCTTTCTCCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQKSPRA*AFSLSL
Trigger: CAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATTT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTGCATCTCATCGAAATaGAACTTCCCTCCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSCISSK*NFPPKS
Trigger: GCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGCA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTCCGCATCAGCCAGGTaGTCCACCGCAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVSASAR*STAMAK
Trigger: CTTGGCCATTGCGGTGGACAACCTGGCTGATGCGGA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGTGAAGATCGTGTCATaGACAATACGGTGGCACTGC +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLVKIVS*TIRWHC
Trigger: GCAGTGCCACCGTATTGTCAATGACACGATCTTCAC...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTGAAGATCGTGTCATaGACAATACGGTGGCACTGC +
Preference number: 5 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAVKIVS*TIRWHC
Trigger: GCAGTGCCACCGTATTGTCAATGACACGATCTTCAC...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCAAAATCTTCACAACGTaGATCGCGCTGGACTGGATG +
Preference number: 5 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLKIFTT*IALDWM
Trigger: CATCCAGTCCAGCGCGATCAACGTTGTGAAGATTTT...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCTTGTCAAAGTCAAACTaGCTGTTCTCCCAGCTTCGA +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSLSKSN*LFSQLR
Trigger: TCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACAA...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCGCAAGGGTCGGGCCTaGAGGGCATATTCCACACAT +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVRKGRA*RAYSTH
Trigger: ATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGCG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGACCACGTACCACACTTaGTACTGGTGCTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQTTYHT*YWCWFL
Trigger: CAAGAACCAGCACCAGTACAAAGTGTGGTACGTGGT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTACCACGTACCACACTTaGTACTGGTGCTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLTTYHT*YWCWFL
Trigger: CAAGAACCAGCACCAGTACAAAGTGTGGTACGTGGT...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGCCAGGCAGATGGTGTaGAGCAGGATGAGAACGAAC +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKARQMV*SRMRTN
Trigger: GTTCGTTCTCATCCTGCTCAACACCATCTGCCTGGC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGCCAGGCAGATGGTGTaGAGCAGGATGAGAACGAAC +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPARQMV*SRMRTN
Trigger: GTTCGTTCTCATCCTGCTCAACACCATCTGCCTGGC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCACAGCTACAAAGAGGTaGATGATCAGGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLTATKR*MIRKAQ
Trigger: CTGTGCCTTCCTGATCATCAACCTCTTTGTAGCTGT...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAACCACATCCAAGTGTTaGATCCGACCCTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: GGWCDLHWLLPPASQLLATTSKC*IRPLAS
Trigger: TGAAGCCAAGGGTCGGATCAAACACTTGGATGTGGT...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCTCTTCCAGATTTTCTaGATGATGGCCCGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLLFQIF*MMARSS
Trigger: GGAGCTTCGGGCCATCATCAAGAAAATCTGGAAGAG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCTCTTCCAGATTTTCTaGATGATGGCCCGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQLFQIF*MMARSS
Trigger: GGAGCTTCGGGCCATCATCAAGAAAATCTGGAAGAG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTTCCTTTGTGAGGGCTaGCCCACCAGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVFLCEG*PTSPCS
Trigger: AGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGAA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGCCTCCTTCATAGCCTaGTCCAACTCCTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPASFIA*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGACAAGGCTATGAAGGAGGC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTATCAGTGTCAGCTTGGTaGTTCCCTGTCTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLSVSAW*FPVLLM
Trigger: CATCAACAAGACAGGGAACAACCAAGCTGACACTGA...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCGGCCCAGGGCAGTGTaGTTGGCATTGTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPRPRAV*LALLML
Trigger: CAACATCAACAATGCCAACAACACTGCCCTGGGCCG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCTCTGGGCAGGTCAGTaGTCGGTGTTCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPLWAGQ*SVFIFL
Trigger: CAGGAAGATGAACACCGACAACTGACCTGCCCAGAG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCCTCTGTTTCGAGGCTaGTCTTCATCCATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPPLFRG*SSSMPS
Trigger: CGAGGGCATGGATGAAGACAAGCCTCGAAACAGAGG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112825.9
ENSMUST00000188522.7
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTGTACCACCTTGCCCTaGAACTTCCTCTCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLCTTLP*NFLSVS
Trigger: GGAAACAGAGAGGAAGTTCAAGGGCAAGGTGGTACA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS TCA 90 bp CATGGGACGGTGACTCAGTGTCAGCTTGGTTGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGGTGGCGAACGTCTGAGGAAAGTTGC +
Preference number: 5 (lower is better)
Translates to: HGTVTQCQLGCSLSC*CAVGAGWRTSEESC
Trigger: GCAACTTTCCTCAGACGTTCGCCACCCAGCGCCCACTGCACATCAACAAGACAGGGAACAACCAAGCTGACACTGAGTCACCGTCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS TCA 90 bp GCTGCTGGGGGTGAACGTGGAGTCCACCAGCTTCTCATGGGACGGTaGCTCAGTGTCAGCTTGGTTGTTCCCTGTCTTGTTGATGTGCAG +
Preference number: 5 (lower is better)
Translates to: AAGGERGVHQLLMGR*LSVSLVVPCLVDVQ
Trigger: CTGCACATCAACAAGACAGGGAACAACCAAGCTGACACTGAGTCACCGTCCCATGAGAAGCTGGTGGACTCCACGTTCACCCCCAGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 90 bp CAGTTAAGGCACACAACGGACATGGTGGCCACATGCAATGGGAGCTaGGCTGGGTTCCCAGGGCTCTGGAAATCAGGGTGGATAAGACGT +
Preference number: 5 (lower is better)
Translates to: QLRHTTDMVATCNGS*AGFPGLWKSGWIRR
Trigger: ACGTCTTATCCACCCTGATTTCCAGAGCCCTGGGAACCCAGCCCAGCTCCCATTGCATGTGGCCACCATGTCCGTTGTGTGCCTTAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112793.10
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTTGGAGTTGGTGGCGTaGGAGTCGTCTTCCGGAAAG +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVLELVA*ESSSGK
Trigger: CTTTCCGGAAGACGACTCCAACGCCACCAACTCCAA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCGTTCCAGGTTGGAGTaGGTGGCGTTGGAGTCGTCT +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVRSRLE*VALESS
Trigger: AGACGACTCCAACGCCACCAACTCCAACCTGGAACG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CAA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCCCCATCAGCTTTGGTaGCTTGTTCTAAAATTGCAC +
Preference number: 5 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLPHQLW*LVLKLH
Trigger: GTGCAATTTTAGAACAAGCAACCAAAGCTGATGGGG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCTCCTACCCCATCAGCTTTGGTaGCTTGTTCTAAAATTGCAC +
Preference number: 5 (lower is better)
Translates to: HRDQTCTAGNLAATSRLLPHQLW*LVLKLH
Trigger: GTGCAATTTTAGAACAAGCAACCAAAGCTGATGGGG...TAGGAGCCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACTCATGTTTCGAGGCTaGTCTTCATCCATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKLMFRG*SSSMPS
Trigger: CGAGGGCATGGATGAAGACAAGCCTCGAAACATGAG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACGGCTGAATTTGGATTaGGAGATCCGATGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKRLNLD*EIRWAS
Trigger: GCTTGCCCATCGGATCTCCAAATCCAAATTCAGCCG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCGGCTGAATTTGGATTaGGAGATCCGATGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPRLNLD*EIRWAS
Trigger: GCTTGCCCATCGGATCTCCAAATCCAAATTCAGCCG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTTTATTGGCTGTGTCTaGCACTTCTGTGAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLFIGCV*HFCEPV
Trigger: CACTGGCTCACAGAAGTGCAAGACACAGCCAATAAA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTGCATCTCATCGAAATaGAACTTCCCTCCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLCISSK*NFPPKS
Trigger: GCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGCA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTGGAGGTCATCCATGTaGATCTTGGTAGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPWRSSM*ILVVGG
Trigger: CCCACCCACTACCAAGATCAACATGGATGACCTCCA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATGGAGGTCATCCATGTaGATCTTGGTAGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKWRSSM*ILVVGG
Trigger: CCCACCCACTACCAAGATCAACATGGATGACCTCCA...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGAAAATCTTCACAACGTaGATCGCGCTGGACTGGATG +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQKIFTT*IALDWM
Trigger: CATCCAGTCCAGCGCGATCAACGTTGTGAAGATTTT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCATGGCTGCCAAAACATaGTCAAAGTCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSMAAKT*SKSNLL
Trigger: CAGCAAGTTTGACTTTGACAATGTTTTGGCAGCCAT...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGCCAGGCAGATGGTGTaGAGCAGGATGAGAACGAAC +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVARQMV*SRMRTN
Trigger: GTTCGTTCTCATCCTGCTCAACACCATCTGCCTGGC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGATATTCATGGCGATTTaGAAGAGGCAGCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQIFMAI*KRQLWP
Trigger: TGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATAT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCACCACGGCCTTGGCCTTCTCCCCTGAAAAGCCGACTCCGTACACCGCCCAGCCCGGTGAAAAGCATGTaGAGTATATTCATGGCGATT +
Preference number: 5 (lower is better)
Translates to: APRPWPSPLKSRLRTPPSPVKSM*SIFMAI
Trigger: AATCGCCATGAATATACTCAACATGCTTTTCACCGG...GCTGGGCGGTGTACGGAGTCGGCTTTTCAGGGGAGAAGGCCAAGGCCGTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGGACCATAGGGACCAGACCTGCACTGCTGGGAACCTCGCAGCCACCTCCCGGCCGGTGAAAAGCATGTaGAGTATATTCATGGCGATT +
Preference number: 5 (lower is better)
Translates to: RDHRDQTCTAGNLAATSRPVKSM*SIFMAI
Trigger: AATCGCCATGAATATACTCAACATGCTTTTCACCGG...CCGGGAGGTGGCTGCGAGGTTCCCAGCAGTGCAGGTCTGGTCCCTATGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGACAGCTACAAAGAGGTaGATGATCAGGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQTATKR*MIRKAQ
Trigger: CTGTGCCTTCCTGATCATCAACCTCTTTGTAGCTGT...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGAGGTTCCCTTCTGTTTaGATCCTCAGGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPRFPSV*ILRAVL
Trigger: CAGGACAGCCCTGAGGATCAAAACAGAAGGGAACCT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATTCCTTTGTGAGGGCTaGCCCACCAGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSFLCEG*PTSPCS
Trigger: AGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGAA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTTGTTCCCTGTCTTGTaGATGTGCAGTGGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVLFPVL*MCSGRW
Trigger: CCAGCGCCCACTGCACATCAACAAGACAGGGAACAA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTCAGTGTCAGCTTGGTaGTTCCCTGTCTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLSVSAW*FPVLLM
Trigger: CATCAACAAGACAGGGAACAACCAAGCTGACACTGA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCGGCCCAGGGCAGTGTaGTTGGCATTGTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVRPRAV*LALLML
Trigger: CAACATCAACAATGCCAACAACACTGCCCTGGGCCG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGATGGGAAGCTGCTGTaGAGTTTCTCGCTGGACTCT +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPDGKLL*SFSLDS
Trigger: AGAGTCCAGCGAGAAACTCAACAGCAGCTTCCCATC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS TCA 90 bp GCGTCAGCCAGCTCCTGGGTGGTGACCTCGATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCTTCTGAAATCAAGACCGCTTCCACC +
Preference number: 5 (lower is better)
Translates to: ASASSWVVTSMNLGS*ANCPSPSEIKTAST
Trigger: GGTGGAAGCGGTCTTGATTTCAGAAGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCATCGAGGTCACCACCCAGGAGCTGGCTGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 90 bp GGCTGGGCTCACTGCAGTACTCGGCTTCTTCACTCATCCTTACGCTaGGGGTCTCATCTGGAAATATCTCCTGATTCACCGTGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: GWAHCSTRLLHSSLR*GSHLEISPDSPWLP
Trigger: AGGGAGCCACGGTGAATCAGGAGATATTTCCAGATGAGACCCGCAGCGTAAGGATGAGTGAAGAAGCCGAGTACTGCAGTGAGCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 90 bp ATCCACCAGAACTCAAACCAGAAGAACAAGAGTATCCCAAGGCACTaGAGCGTCCTCATGGTGTCGGAAGCTGAGGGCCAGAGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: IHQNSNQKNKSIPRH*SVLMVSEAEGQRGP
Trigger: AGGGCCTCTCTGGCCCTCAGCTTCCGACACCATGAGGACGCTGCAGTGCCTTGGGATACTCTTGTTCTTCTGGTTTGAGTTCTGGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239204.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGCCCCATCAGCTTTGGTaGCTTGTTCTAAAATTGCAC +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQPHQLW*LVLKLH
Trigger: GTGCAATTTTAGAACAAGCAACCAAAGCTGATGGGG...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCTTGGCCCCATCAGCTTaGGTTGCTTGTTCTAAAATT +
Preference number: 5 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLLAPSA*VACSKI
Trigger: AATTTTAGAACAAGCAACCAAAGCTGATGGGGCCAA...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATTGGTGATGCCGTGCTaGGGCCCATCCCACCCGGGT +
Preference number: 5 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQLVMPC*GPSHPG
Trigger: ACCCGGGTGGGATGGGCCCAAGCACGGCATCACCAA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGCTTTCTCCCTCTCTTaGGAAAACTCCCCGCTCAAA +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKAFSLS*ENSPLK
Trigger: TTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAGC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAAAATCTCCTCGGGCTTaGGCTTTCTCCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKKSPRA*AFSLSL
Trigger: CAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATTT...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTGCATCTCATCGAAATaGAACTTCCCTCCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQCISSK*NFPPKS
Trigger: GCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGCA...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTCAATTTTCTCCTCTTaGCTCTCCTCCACGGCTGGC +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSIFSS*LSSTAG
Trigger: GCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTGA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACCTGCAGTGTCTGGGTaGGAGTGGGGACTCTTATCC +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSPAVSG*EWGLLS
Trigger: GGATAAGAGTCCCCACTCCAACCCAGACACTGCAGG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGTGAAGATCGTGTCATaGACAATACGGTGGCACTGC +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKVKIVS*TIRWHC
Trigger: GCAGTGCCACCGTATTGTCAATGACACGATCTTCAC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAGTTGTCAAAGTCAAACTaGCTGTTCTCCCAGCTTCGA +
Preference number: 5 (lower is better)
Translates to: AGGVICTGSCHLHLSSLQLSKSN*LFSQLR
Trigger: TCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACAA...CTGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTACTGGTGCTGGTTCTaGGGGATGTACCTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVYWCWF*GMYLRK
Trigger: CTTGCGAAGGTACATCCCCAAGAACCAGCACCAGTA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGACCACGTACCACACTTaGTACTGGTGCTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPTTYHT*YWCWFL
Trigger: CAAGAACCAGCACCAGTACAAAGTGTGGTACGTGGT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGCCAGGCAGATGGTGTaGAGCAGGATGAGAACGAAC +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVARQMV*SRMRTN
Trigger: GTTCGTTCTCATCCTGCTCAACACCATCTGCCTGGC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCCGGTGAAAAGCATGTaGAGTATATTCATGGCGATT +
Preference number: 5 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLPVKSM*SIFMAI
Trigger: AATCGCCATGAATATACTCAACATGCTTTTCACCGG...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GCTGAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCAAGTTGTTGTTCCGATaGATCTCTGTGGTGTCATTC +
Preference number: 5 (lower is better)
Translates to: AEGGWCDLHWLLPPASQLKLLFR*ISVVSF
Trigger: GAATGACACCACAGAGATCAATCGGAACAACAACTT...GAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTGTTTGATCCGACCCTaGGCTTCAGGGTCATACTCG +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVCLIRP*ASGSYS
Trigger: CGAGTATGACCCTGAAGCCAAGGGTCGGATCAAACA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGACCACATCCAAGTGTTaGATCCGACCCTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPTTSKC*IRPLAS
Trigger: TGAAGCCAAGGGTCGGATCAAACACTTGGATGTGGT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTAGGTTCCCTTCTGTTTaGATCCTCAGGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVRFPSV*ILRAVL
Trigger: CAGGACAGCCCTGAGGATCAAAACAGAAGGGAACCT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCTCTTCCAGATTTTCTaGATGATGGCCCGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPLFQIF*MMARSS
Trigger: GGAGCTTCGGGCCATCATCAAGAAAATCTGGAAGAG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACTCTTCCAGATTTTCTaGATGATGGCCCGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKLFQIF*MMARSS
Trigger: GGAGCTTCGGGCCATCATCAAGAAAATCTGGAAGAG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGCCTCCTTCATAGCCTaGTCCAACTCCTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVASFIA*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGACAAGGCTATGAAGGAGGC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCCCAGGGCAGTGTTGTaGGCATTGTTGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVPRAVL*ALLMLA
Trigger: TGCCAACATCAACAATGCCAACAACACTGCCCTGGG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCTCTGGGCAGGTCAGTaGTCGGTGTTCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLWAGQ*SVFIFL
Trigger: CAGGAAGATGAACACCGACAACTGACCTGCCCAGAG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGATGAACTTGGGATCTaGAGCAAACTGTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPDELGI*SKLSQS
Trigger: GGACTGGGACAGTTTGCTCAAGATCCCAAGTTCATC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTCTCCATCTCCTCTATaGTCATGTCGCAGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVSPSPL*SCRRRQ
Trigger: CTGACGCCTGCGACATGACAATAGAGGAGATGGAGA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 90 bp CTGGCTTCTCCATCACCTCCTGTTTCTTTTCTGGGCTGGCAGTCCTaGCCAGCTTCTTCCTCTCCTTCTCTTCTTCCTCCTCCTTTTGGG +
Preference number: 5 (lower is better)
Translates to: LASPSPPVSFLGWQS*PASSSPSLLPPPFG
Trigger: CCCAAAAGGAGGAGGAAGAAGAGAAGGAGAGGAAGAAGCTGGCCAGGACTGCCAGCCCAGAAAAGAAACAGGAGGTGATGGAGAAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 90 bp GCCCTTGAACTTCCTCTCTGTTTCCTCAGACGAGTGACTGGAGAGTaGCTGGTATGGGGGTGTGGATGGCTGAACAAAGGCCCGAATCAT +
Preference number: 5 (lower is better)
Translates to: ALELPLCFLRRVTGE*LVWGCGWLNKGPNH
Trigger: ATGATTCGGGCCTTTGTTCAGCCATCCACACCCCCATACCAGCCACTCTCCAGTCACTCGTCTGAGGAAACAGAGAGGAAGTTCAAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATTGGAGTTGGTGGCGTaGGAGTCGTCTTCCGGAAAG +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSLELVA*ESSSGK
Trigger: CTTTCCGGAAGACGACTCCAACGCCACCAACTCCAA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTTTGGCCCCATCAGCTTaGGTTGCTTGTTCTAAAATT +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLLAPSA*VACSKI
Trigger: AATTTTAGAACAAGCAACCAAAGCTGATGGGGCCAA...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTTCCCTCCTAGAGCATaGGCCCCATCAGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVFPPRA*APSALV
Trigger: AACCAAAGCTGATGGGGCCAATGCTCTAGGAGGGAA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTTGGTGATGCCGTGCTaGGGCCCATCCCACCCGGGT +
Preference number: 5 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLLVMPC*GPSHPG
Trigger: ACCCGGGTGGGATGGGCCCAAGCACGGCATCACCAA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTTTATTGGCTGTGTCTaGCACTTCTGTGAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPFIGCV*HFCEPV
Trigger: CACTGGCTCACAGAAGTGCAAGACACAGCCAATAAA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTGGAGGTCATCCATGTaGATCTTGGTAGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVWRSSM*ILVVGG
Trigger: CCCACCCACTACCAAGATCAACATGGATGACCTCCA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGTGAAGATCGTGTCATaGACAATACGGTGGCACTGC +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVVKIVS*TIRWHC
Trigger: GCAGTGCCACCGTATTGTCAATGACACGATCTTCAC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGAAAATCTTCACAACGTaGATCGCGCTGGACTGGATG +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPKIFTT*IALDWM
Trigger: CATCCAGTCCAGCGCGATCAACGTTGTGAAGATTTT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTGCAATGGCTGCCAAAACATaGTCAAAGTCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: GGWCDLHWLLPPASQLLAMAAKT*SKSNLL
Trigger: CAGCAAGTTTGACTTTGACAATGTTTTGGCAGCCAT...TGCAAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTATGGCTGCCAAAACATaGTCAAAGTCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLMAAKT*SKSNLL
Trigger: CAGCAAGTTTGACTTTGACAATGTTTTGGCAGCCAT...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTACTGGTGCTGGTTCTaGGGGATGTACCTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVYWCWF*GMYLRK
Trigger: CTTGCGAAGGTACATCCCCAAGAACCAGCACCAGTA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCACGTACCACACTTaGTACTGGTGCTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVTTYHT*YWCWFL
Trigger: CAAGAACCAGCACCAGTACAAAGTGTGGTACGTGGT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGATATTCATGGCGATTTaGAAGAGGCAGCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPIFMAI*KRQLWP
Trigger: TGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATAT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GAGGGCGGGTGGTGTGATCTGCACTGGCTCCTGCCACCTGCATCTCAGCTCCTTCCGGTGAAAAGCATGTaGAGTATATTCATGGCGATT +
Preference number: 5 (lower is better)
Translates to: EGGWCDLHWLLPPASQLLPVKSM*SIFMAI
Trigger: AATCGCCATGAATATACTCAACATGCTTTTCACCGG...AAGGAGCTGAGATGCAGGTGGCAGGAGCCAGTGCAGATCACACCACCCGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGGGAACGTCTGGAAGTaGTTGTTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPGNVWK*LFRLIS
Trigger: AGAGATCAATCGGAACAACAACTTCCAGACGTTCCC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAGGGAACGTCTGGAAGTaGTTGTTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKGNVWK*LFRLIS
Trigger: AGAGATCAATCGGAACAACAACTTCCAGACGTTCCC...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTCTGGGGCACACTTCTaGCCTGGCATGCAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWSGAHF*PGMQAS
Trigger: GCTGGCCTGCATGCCAGGCAAGAAGTGTGCCCCAGA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGACAGCTACAAAGAGGTaGATGATCAGGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPTATKR*MIRKAQ
Trigger: CTGTGCCTTCCTGATCATCAACCTCTTTGTAGCTGT...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTGTTTGATCCGACCCTaGGCTTCAGGGTCATACTCG +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVCLIRP*ASGSYS
Trigger: CGAGTATGACCCTGAAGCCAAGGGTCGGATCAAACA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTAGGTTCCCTTCTGTTTaGATCCTCAGGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVRFPSV*ILRAVL
Trigger: CAGGACAGCCCTGAGGATCAAAACAGAAGGGAACCT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATTGTTCCCTGTCTTGTaGATGTGCAGTGGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSLFPVL*MCSGRW
Trigger: CCAGCGCCCACTGCACATCAACAAGACAGGGAACAA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTCAGTGTCAGCTTGGTaGTTCCCTGTCTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPSVSAW*FPVLLM
Trigger: CATCAACAAGACAGGGAACAACCAAGCTGACACTGA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGCAGTGTTGTTGGCATaGTTGATGTTGGCATTGGAG +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPAVLLA*LMLALE
Trigger: CTCCAATGCCAACATCAACAATGCCAACAACACTGC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACGGCCCAGGGCAGTGTaGTTGGCATTGTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSRPRAV*LALLML
Trigger: CAACATCAACAATGCCAACAACACTGCCCTGGGCCG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGATGGGAAGCTGCTGTaGAGTTTCTCGCTGGACTCT +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVDGKLL*SFSLDS
Trigger: AGAGTCCAGCGAGAAACTCAACAGCAGCTTCCCATC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGATGAACTTGGGATCTaGAGCAAACTGTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVDELGI*SKLSQS
Trigger: GGACTGGGACAGTTTGCTCAAGATCCCAAGTTCATC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTCTCCATCTCCTCTATaGTCATGTCGCAGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVSPSPL*SCRRRQ
Trigger: CTGACGCCTGCGACATGACAATAGAGGAGATGGAGA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS TCA 90 bp GGCATTTTCTTCTGCAGAATCGATTCCACCTGCGCCAGTAGCGGCTaGATTTGGATTTGGAGATCCGATGGGCAAGCCTGGCTCCACAGT +
Preference number: 5 (lower is better)
Translates to: GIFFCRIDSTCASSG*IWIWRSDGQAWLHS
Trigger: ACTGTGGAGCCAGGCTTGCCCATCGGATCTCCAAATCCAAATTCAGCCGCTACTGGCGCAGGTGGAATCGATTCTGCAGAAGAAAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 90 bp ACGTGGGTGGCTAGAGGGGGAGCCACAGAAGCTGGAAATGTGGTCTaGAGGGTTGTTCTTACCATAGAGGGAGAGCATTGGGTATGTTCA +
Preference number: 5 (lower is better)
Translates to: TWVARGGATEAGNVV*RVVLTIEGEHWVCS
Trigger: TGAACATACCCAATGCTCTCCCTCTATGGTAAGAACAACCCTCCAGACCACATTTCCAGCTTCTGTGGCTCCCCCTCTAGCCACCCACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112793.10
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTGCACTGCCCATGAGCTaGGCCTGCCGGGCGGCATCG +
Preference number: 5 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPALPMS*ACRAAS
Trigger: CGATGCCGCCCGGCAGGCCAAGCTCATGGGCAGTGC...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCACGTTCCAGGTTGGAGTaGGTGGCGTTGGAGTCGTCT +
Preference number: 5 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPRSRLE*VALESS
Trigger: AGACGACTCCAACGCCACCAACTCCAACCTGGAACG...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078320.14
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCCCCATCAGCTTTGGTaGCTTGTTCTAAAATTGCAC +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPPHQLW*LVLKLH
Trigger: GTGCAATTTTAGAACAAGCAACCAAAGCTGATGGGG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATTCCCTCCTAGAGCATaGGCCCCATCAGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSFPPRA*APSALV
Trigger: AACCAAAGCTGATGGGGCCAATGCTCTAGGAGGGAA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGCTTTCTCCCTCTCTTaGGAAAACTCCCCGCTCAAA +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVAFSLS*ENSPLK
Trigger: TTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAGC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACTCATGTTTCGAGGCTaGTCTTCATCCATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSLMFRG*SSSMPS
Trigger: CGAGGGCATGGATGAAGACAAGCCTCGAAACATGAG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACGGCTGAATTTGGATTaGGAGATCCGATGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSRLNLD*EIRWAS
Trigger: GCTTGCCCATCGGATCTCCAAATCCAAATTCAGCCG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATCAATTTTCTCCTCTTaGCTCTCCTCCACGGCTGGC +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSSIFSS*LSSTAG
Trigger: GCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTGA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATGGAGGTCATCCATGTaGATCTTGGTAGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSWRSSM*ILVVGG
Trigger: CCCACCCACTACCAAGATCAACATGGATGACCTCCA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGCCAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTTGGCAGACACAGTGCCTGCAGTGTCTGGGTaGGAGTGGGGACTCTTATCC +
Preference number: 5 (lower is better)
Translates to: SQAPPTTSPLANSLADTVPAVSG*EWGLLS
Trigger: GGATAAGAGTCCCCACTCCAACCCAGACACTGCAGG...CACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTAAAATCTTCACAACGTaGATCGCGCTGGACTGGATG +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVKIFTT*IALDWM
Trigger: CATCCAGTCCAGCGCGATCAACGTTGTGAAGATTTT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAATTGTCAAAGTCAAACTaGCTGTTCTCCCAGCTTCGA +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKLSKSN*LFSQLR
Trigger: TCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACAA...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTACCACGTACCACACTTaGTACTGGTGCTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVTTYHT*YWCWFL
Trigger: CAAGAACCAGCACCAGTACAAAGTGTGGTACGTGGT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTATATTCATGGCGATTTaGAAGAGGCAGCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVIFMAI*KRQLWP
Trigger: TGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATAT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGGGAACGTCTGGAAGTaGTTGTTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVGNVWK*LFRLIS
Trigger: AGAGATCAATCGGAACAACAACTTCCAGACGTTCCC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACAGCTACAAAGAGGTaGATGATCAGGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVTATKR*MIRKAQ
Trigger: CTGTGCCTTCCTGATCATCAACCTCTTTGTAGCTGT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTGCAGTGTTGTTGGCATaGTTGATGTTGGCATTGGAG +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVAVLLA*LMLALE
Trigger: CTCCAATGCCAACATCAACAATGCCAACAACACTGC...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGATGAACTTGGGATCTaGAGCAAACTGTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVDELGI*SKLSQS
Trigger: GGACTGGGACAGTTTGCTCAAGATCCCAAGTTCATC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATCTCCATCTCCTCTATaGTCATGTCGCAGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSSPSPL*SCRRRQ
Trigger: CTGACGCCTGCGACATGACAATAGAGGAGATGGAGA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACATAGAGGGAGAGCATaGGGTATGTTCAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSHRGRA*GMFSWV
Trigger: CACCCAGCTGAACATACCCAATGCTCTCCCTCTATG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000112790.9
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000220022.2
CDS TCA 90 bp AGGCCTGAAGACCCAGGCTGTACATCTTCAGGAGCATTTCTGCAGTaGAAAGGGCCAGGAGGGCTTTATTGGCTGTGTCTTGCACTTCTG +
Preference number: 5 (lower is better)
Translates to: RPEDPGCTSSGAFLQ*KGPGGLYWLCLALL
Trigger: CAGAAGTGCAAGACACAGCCAATAAAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCCTGAAGATGTACAGCCTGGGTCTTCAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCCCCATCAGCTTTGGTaGCTTGTTCTAAAATTGCAC +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVPHQLW*LVLKLH
Trigger: GTGCAATTTTAGAACAAGCAACCAAAGCTGATGGGG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGTTGGCCCCATCAGCTTaGGTTGCTTGTTCTAAAATT +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPLAPSA*VACSKI
Trigger: AATTTTAGAACAAGCAACCAAAGCTGATGGGGCCAA...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGCTTTCTCCCTCTCTTaGGAAAACTCCCCGCTCAAA +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSAFSLS*ENSPLK
Trigger: TTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAGC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAAAATCTCCTCGGGCTTaGGCTTTCTCCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSKSPRA*AFSLSL
Trigger: CAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATTT...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTCCGCATCAGCCAGGTaGTCCACCGCAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQSASAR*STAMAK
Trigger: CTTGGCCATTGCGGTGGACAACCTGGCTGATGCGGA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAACCTGCAGTGTCTGGGTaGGAGTGGGGACTCTTATCC +
Preference number: 5 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQPAVSG*EWGLLS
Trigger: GGATAAGAGTCCCCACTCCAACCCAGACACTGCAGG...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGTGAAGATCGTGTCATaGACAATACGGTGGCACTGC +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSVKIVS*TIRWHC
Trigger: GCAGTGCCACCGTATTGTCAATGACACGATCTTCAC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTAAAATCTTCACAACGTaGATCGCGCTGGACTGGATG +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVKIFTT*IALDWM
Trigger: CATCCAGTCCAGCGCGATCAACGTTGTGAAGATTTT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTTTGTCAAAGTCAAACTaGCTGTTCTCCCAGCTTCGA +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVLSKSN*LFSQLR
Trigger: TCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACAA...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAAATGGCTGCCAAAACATaGTCAAAGTCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKMAAKT*SKSNLL
Trigger: CAGCAAGTTTGACTTTGACAATGTTTTGGCAGCCAT...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGCGCAAGGGTCGGGCCTaGAGGGCATATTCCACACAT +
Preference number: 5 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWRKGRA*RAYSTH
Trigger: ATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGCG...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAACCACGTACCACACTTaGTACTGGTGCTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSTTYHT*YWCWFL
Trigger: CAAGAACCAGCACCAGTACAAAGTGTGGTACGTGGT...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTATATTCATGGCGATTTaGAAGAGGCAGCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVIFMAI*KRQLWP
Trigger: TGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATAT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGCCGGTGAAAAGCATGTaGAGTATATTCATGGCGATT +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPPVKSM*SIFMAI
Trigger: AATCGCCATGAATATACTCAACATGCTTTTCACCGG...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCCCTGGGGCCCTGCTCCATAGAGACGGCCAGGCTCAGACAGAACATGTGCAAACCGGTGAAAAGCATGTaGAGTATATTCATGGCGATT +
Preference number: 5 (lower is better)
Translates to: SLGPCSIETARLRQNMCKPVKSM*SIFMAI
Trigger: AATCGCCATGAATATACTCAACATGCTTTTCACCGG...TTTGCACATGTTCTGTCTGAGCCTGGCCGTCTCTATGGAGCAGGGCCCCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTCTGGGGCACACTTCTaGCCTGGCATGCAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTSGAHF*PGMQAS
Trigger: GCTGGCCTGCATGCCAGGCAAGAAGTGTGCCCCAGA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTCCCCTTCCGTGCTGTaGCTGGGCTCAGACTCTGGG +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTSPSVL*LGSDSG
Trigger: CCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGGA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTACAGCTACAAAGAGGTaGATGATCAGGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVTATKR*MIRKAQ
Trigger: CTGTGCCTTCCTGATCATCAACCTCTTTGTAGCTGT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAACCACATCCAAGTGTTaGATCCGACCCTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSTTSKC*IRPLAS
Trigger: TGAAGCCAAGGGTCGGATCAAACACTTGGATGTGGT...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACTCTTCCAGATTTTCTaGATGATGGCCCGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSLFQIF*MMARSS
Trigger: GGAGCTTCGGGCCATCATCAAGAAAATCTGGAAGAG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTTCCTTTGTGAGGGCTaGCCCACCAGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLFLCEG*PTSPCS
Trigger: AGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGAA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCATTGTTCCCTGTCTTGTaGATGTGCAGTGGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPLFPVL*MCSGRW
Trigger: CCAGCGCCCACTGCACATCAACAAGACAGGGAACAA...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTCAGTGTCAGCTTGGTaGTTCCCTGTCTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVSVSAW*FPVLLM
Trigger: CATCAACAAGACAGGGAACAACCAAGCTGACACTGA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTGCAGTGTTGTTGGCATaGTTGATGTTGGCATTGGAG +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVAVLLA*LMLALE
Trigger: CTCCAATGCCAACATCAACAATGCCAACAACACTGC...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGCTTCATGTACCACCTaGCCCTTGAACTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSASCTT*PLNFLS
Trigger: AGAGAGGAAGTTCAAGGGCAAGGTGGTACATGAAGC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
CDS-3UTR CAA 90 bp CACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTAGAAACAGTTGAGTaGAGCTTCATGTACCACCTT +
Preference number: 5 (lower is better)
Translates to: HRPALRLIPTAVNEDAVPVETVE*SFMYHL
Trigger: AAGGTGGTACATGAAGCTCAACTCAACTGTTTCTAC...CGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
CDS GCA 90 bp CACCAGGAAGATCACGAGCCAGTAGAAGACGTTGGACTTAACTGCTaGACGGCATTTTCTTCTGCAGAATCGATTCCACCTGCGCCAGTA +
Preference number: 5 (lower is better)
Translates to: HQEDHEPVEDVGLNC*TAFSSAESIPPAPV
Trigger: TACTGGCGCAGGTGGAATCGATTCTGCAGAAGAAAATGCCGTGCAGCAGTTAAGTCCAACGTCTTCTACTGGCTCGTGATCTTCCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 90 bp GAACACCAGGAAGATCACGAGCCAGTAGAAGACGTTGGACTTAACTaGTGCACGGCATTTTCTTCTGCAGAATCGATTCCACCTGCGCCA +
Preference number: 5 (lower is better)
Translates to: EHQEDHEPVEDVGLN*CTAFSSAESIPPAP
Trigger: TGGCGCAGGTGGAATCGATTCTGCAGAAGAAAATGCCGTGCAGCAGTTAAGTCCAACGTCTTCTACTGGCTCGTGATCTTCCTGGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GACCAGGCAGAAAGGGATTTAACTGGACTTGTCTGTTACTTGGACTGTGTCATGTCCACTCGTTCCAGGTaGGAGTTGGTGGCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: DQAERDLTGLVCYLDCVMSTRSR*ELVALE
Trigger: CTCCAACGCCACCAACTCCAACCTGGAACGAGTGGA...CATGACACAGTCCAAGTAACAGACAAGTCCAGTTAAATCCCTTTCTGCCTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCCCATCAGCTTTGGTaGCTTGTTCTAAAATTGCAC +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVPHQLW*LVLKLH
Trigger: GTGCAATTTTAGAACAAGCAACCAAAGCTGATGGGG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCATTCCCTCCTAGAGCATaGGCCCCATCAGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPFPPRA*APSALV
Trigger: AACCAAAGCTGATGGGGCCAATGCTCTAGGAGGGAA...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATTGGTGATGCCGTGCTaGGGCCCATCCCACCCGGGT +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVLVMPC*GPSHPG
Trigger: ACCCGGGTGGGATGGGCCCAAGCACGGCATCACCAA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTGCATCTCATCGAAATaGAACTTCCCTCCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVCISSK*NFPPKS
Trigger: GCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGCA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCATGGAGGTCATCCATGTaGATCTTGGTAGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPWRSSM*ILVVGG
Trigger: CCCACCCACTACCAAGATCAACATGGATGACCTCCA...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAAAAATCTTCACAACGTaGATCGCGCTGGACTGGATG +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSKIFTT*IALDWM
Trigger: CATCCAGTCCAGCGCGATCAACGTTGTGAAGATTTT...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACATGCTTTAGCCCCTaGGCCCTGTTGATGGCCCTC +
Preference number: 5 (lower is better)
Translates to: SWDRKMQLPILVSEAEAETCFSP*ALLMAL
Trigger: GAGGGCCATCAACAGGGCCAAGGGGCTAAAGCATGT...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGACATGCTTTAGCCCCTaGGCCCTGTTGATGGCCCTC +
Preference number: 5 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQTCFSP*ALLMAL
Trigger: GAGGGCCATCAACAGGGCCAAGGGGCTAAAGCATGT...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTTTGTCAAAGTCAAACTaGCTGTTCTCCCAGCTTCGA +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVLSKSN*LFSQLR
Trigger: TCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACAA...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTATGGCTGCCAAAACATaGTCAAAGTCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVMAAKT*SKSNLL
Trigger: CAGCAAGTTTGACTTTGACAATGTTTTGGCAGCCAT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGCGCAAGGGTCGGGCCTaGAGGGCATATTCCACACAT +
Preference number: 5 (lower is better)
Translates to: SWDRKMQLPILVSEAEAERKGRA*RAYSTH
Trigger: ATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGCG...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAATATTCATGGCGATTTaGAAGAGGCAGCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSIFMAI*KRQLWP
Trigger: TGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATAT...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTCCGGTGAAAAGCATGTaGAGTATATTCATGGCGATT +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVPVKSM*SIFMAI
Trigger: AATCGCCATGAATATACTCAACATGCTTTTCACCGG...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACATAGAGGGAGAGCATaGGGTATGTTCAGCTGGATT +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSHRGRA*GMFSWI
Trigger: AATCCAGCTGAACATACCCAATGCTCTCCCTCTATG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR CAA 90 bp CAGGTGTGGGATGGGCAGGTGTGTATGAGTGGTCTAGAGGCCTGTTCATCTTTCCATAGAGGGAGAGCATaGGGTATGTTCAGCTGGATT +
Preference number: 5 (lower is better)
Translates to: QVWDGQVCMSGLEACSSFHRGRA*GMFSWI
Trigger: AATCCAGCTGAACATACCCAATGCTCTCCCTCTATG...GAAAGATGAACAGGCCTCTAGACCACTCATACACACCTGCCCATCCCACACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp CGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTAAGTTGTTGTTCCGATaGATCTCTGTGGTGTCATTC +
Preference number: 5 (lower is better)
Translates to: RPALRLIPTAVNEDAVPVKLLFR*ISVVSF
Trigger: GAATGACACCACAGAGATCAATCGGAACAACAACTT...AACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAGCCTCCTTCATAGCCTaGTCCAACTCCTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQASFIA*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGACAAGGCTATGAAGGAGGC...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CTCCCAACTATGGCTGTCTGTGTTTGGGCTAATCATGGGTCAAAGGTGAGTCTAGCCTCCTTCATAGCCTaGTCCAACTCCTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LPTMAVCVWANHGSKVSLASFIA*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGACAAGGCTATGAAGGAGGC...TAGACTCACCTTTGACCCATGATTAGCCCAAACACAGACAGCCATAGTTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCAGCAGTGTTGTTGGCATaGTTGATGTTGGCATTGGAG +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSAVLLA*LMLALE
Trigger: CTCCAATGCCAACATCAACAATGCCAACAACACTGC...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGCCAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTTGGCAGACACAGTGTCTCCATCTCCTCTATaGTCATGTCGCAGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: SQAPPTTSPLANSLADTVSPSPL*SCRRRQ
Trigger: CTGACGCCTGCGACATGACAATAGAGGAGATGGAGA...CACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTCTCCTCTGCACTCCTaGCACAGCTCACGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQSPLHS*HSSREH
Trigger: GTGCTCACGTGAGCTGTGCAAGGAGTGCAGAGGAGA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220022.2
CDS GCA 90 bp AAAATAGGCCTGAAGACCCAGGCTGTACATCTTCAGGAGCATTTCTaGAGTGAAAAGGGCCAGGAGGGCTTTATTGGCTGTGTCTTGCAC +
Preference number: 5 (lower is better)
Translates to: KIGLKTQAVHLQEHF*SEKGQEGFIGCVLH
Trigger: GTGCAAGACACAGCCAATAAAGCCCTCCTGGCCCTTTTCACTGCAGAAATGCTCCTGAAGATGTACAGCCTGGGTCTTCAGGCCTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACCCCATCAGCTTTGGTaGCTTGTTCTAAAATTGCAC +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSPHQLW*LVLKLH
Trigger: GTGCAATTTTAGAACAAGCAACCAAAGCTGATGGGG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTTCCCTCCTAGAGCATaGGCCCCATCAGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWFPPRA*APSALV
Trigger: AACCAAAGCTGATGGGGCCAATGCTCTAGGAGGGAA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCAAAATCTCCTCGGGCTTaGGCTTTCTCCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPKSPRA*AFSLSL
Trigger: CAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATTT...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATGCATCTCATCGAAATaGAACTTCCCTCCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSCISSK*NFPPKS
Trigger: GCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGCA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTCAATTTTCTCCTCTTaGCTCTCCTCCACGGCTGGC +
Preference number: 5 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWSIFSS*LSSTAG
Trigger: GCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTGA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATCAATTTTCTCCTCTTaGCTCTCCTCCACGGCTGGC +
Preference number: 5 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQSIFSS*LSSTAG
Trigger: GCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTGA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAAGATGCCCAGTGAAGATCGTGTCATaGACAATACGGTGGCACTGC +
Preference number: 5 (lower is better)
Translates to: RGCTYAHTMDTSVTQRCPVKIVS*TIRWHC
Trigger: GCAGTGCCACCGTATTGTCAATGACACGATCTTCAC...TGGGCATCTTTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTATGGCTGCCAAAACATaGTCAAAGTCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVMAAKT*SKSNLL
Trigger: CAGCAAGTTTGACTTTGACAATGTTTTGGCAGCCAT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCGCAAGGGTCGGGCCTaGAGGGCATATTCCACACAT +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTRKGRA*RAYSTH
Trigger: ATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGCG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGCCAGGCAGATGGTGTaGAGCAGGATGAGAACGAAC +
Preference number: 5 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLARQMV*SRMRTN
Trigger: GTTCGTTCTCATCCTGCTCAACACCATCTGCCTGGC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTGAAAAGCATGTaGAGTATATTCATGGCGATT +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVPVKSM*SIFMAI
Trigger: AATCGCCATGAATATACTCAACATGCTTTTCACCGG...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GTACACCGCCCAGCTCTGAGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTAAGTTGTTGTTCCGATaGATCTCTGTGGTGTCATTC +
Preference number: 5 (lower is better)
Translates to: VHRPALRLIPTAVNEDAVKLLFR*ISVVSF
Trigger: GAATGACACCACAGAGATCAATCGGAACAACAACTT...AACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCTCAGAGCTGGGCGGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATCCCCTTCCGTGCTGTaGCTGGGCTCAGACTCTGGG +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVSPSVL*LGSDSG
Trigger: CCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGGA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTGTTTGATCCGACCCTaGGCTTCAGGGTCATACTCG +
Preference number: 5 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWCLIRP*ASGSYS
Trigger: CGAGTATGACCCTGAAGCCAAGGGTCGGATCAAACA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGCCAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTTGGCAGACACAGTGCTCTTCCAGATTTTCTaGATGATGGCCCGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: SQAPPTTSPLANSLADTVLFQIF*MMARSS
Trigger: GGAGCTTCGGGCCATCATCAAGAAAATCTGGAAGAG...CACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGGCCTCCTTCATAGCCTaGTCCAACTCCTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEASFIA*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGACAAGGCTATGAAGGAGGC...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGCCTCCTTCATAGCCTaGTCCAACTCCTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLASFIA*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGACAAGGCTATGAAGGAGGC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTTGTTCCCTGTCTTGTaGATGTGCAGTGGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLLFPVL*MCSGRW
Trigger: CCAGCGCCCACTGCACATCAACAAGACAGGGAACAA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAACCCAGGGCAGTGTTGTaGGCATTGTTGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQPRAVL*ALLMLA
Trigger: TGCCAACATCAACAATGCCAACAACACTGCCCTGGG...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGCTCTGGGCAGGTCAGTaGTCGGTGTTCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQLWAGQ*SVFIFL
Trigger: CAGGAAGATGAACACCGACAACTGACCTGCCCAGAG...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCTGGGCAGGTCAGTaGTCGGTGTTCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLLWAGQ*SVFIFL
Trigger: CAGGAAGATGAACACCGACAACTGACCTGCCCAGAG...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCATTGGCCCCATCAGCTTaGGTTGCTTGTTCTAAAATT +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSLAPSA*VACSKI
Trigger: AATTTTAGAACAAGCAACCAAAGCTGATGGGGCCAA...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTTCCCTCCTAGAGCATaGGCCCCATCAGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLFPPRA*APSALV
Trigger: AACCAAAGCTGATGGGGCCAATGCTCTAGGAGGGAA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGAAATCTCCTCGGGCTTaGGCTTTCTCCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWKSPRA*AFSLSL
Trigger: CAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATTT...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGCTCATGTTTCGAGGCTaGTCTTCATCCATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQLMFRG*SSSMPS
Trigger: CGAGGGCATGGATGAAGACAAGCCTCGAAACATGAG...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATCCGCATCAGCCAGGTaGTCCACCGCAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVSASAR*STAMAK
Trigger: CTTGGCCATTGCGGTGGACAACCTGGCTGATGCGGA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTCCGCATCAGCCAGGTaGTCCACCGCAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPSASAR*STAMAK
Trigger: CTTGGCCATTGCGGTGGACAACCTGGCTGATGCGGA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GACCAGGCAGAAAGGGATTTAACTGGACTTGTCTGTTACTTGGACTGTGTCATGTCAATTTTCTCCTCTTaGCTCTCCTCCACGGCTGGC +
Preference number: 5 (lower is better)
Translates to: DQAERDLTGLVCYLDCVMSIFSS*LSSTAG
Trigger: GCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTGA...CATGACACAGTCCAAGTAACAGACAAGTCCAGTTAAATCCCTTTCTGCCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGGTGAAGATCGTGTCATaGACAATACGGTGGCACTGC +
Preference number: 5 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWVKIVS*TIRWHC
Trigger: GCAGTGCCACCGTATTGTCAATGACACGATCTTCAC...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCGCCAGGCAGATGGTGTaGAGCAGGATGAGAACGAAC +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTARQMV*SRMRTN
Trigger: GTTCGTTCTCATCCTGCTCAACACCATCTGCCTGGC...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGGCTTATCCCGACAGCAGTGAATGAAGACGCTGTTCCGGTTACCTCCAGGTCACCGGTGAAAAGCATGTaGAGTATATTCATGGCGATT +
Preference number: 5 (lower is better)
Translates to: RLIPTAVNEDAVPVTSRSPVKSM*SIFMAI
Trigger: AATCGCCATGAATATACTCAACATGCTTTTCACCGG...TGACCTGGAGGTAACCGGAACAGCGTCTTCATTCACTGCTGTCGGGATAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATCCCCTTCCGTGCTGTaGCTGGGCTCAGACTCTGGG +
Preference number: 5 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKSPSVL*LGSDSG
Trigger: CCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGGA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTGTTTGATCCGACCCTaGGCTTCAGGGTCATACTCG +
Preference number: 5 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLCLIRP*ASGSYS
Trigger: CGAGTATGACCCTGAAGCCAAGGGTCGGATCAAACA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGTGTTTGATCCGACCCTaGGCTTCAGGGTCATACTCG +
Preference number: 5 (lower is better)
Translates to: SWDRKMQLPILVSEAEAECLIRP*ASGSYS
Trigger: CGAGTATGACCCTGAAGCCAAGGGTCGGATCAAACA...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCTGCCTCCCTGCTTCAGGAGATGGAAAGGATGAATAGTTTTTACAAGGGCTACTGTTTGATCCGACCCTaGGCTTCAGGGTCATACTCG +
Preference number: 5 (lower is better)
Translates to: SASLLQEMERMNSFYKGYCLIRP*ASGSYS
Trigger: CGAGTATGACCCTGAAGCCAAGGGTCGGATCAAACA...GTAGCCCTTGTAAAAACTATTCATCCTTTCCATCTCCTGAAGCAGGGAGGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATTCCTTTGTGAGGGCTaGCCCACCAGCCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVFLCEG*PTSPCS
Trigger: AGAGCAGGGGCTGGTGGGCAAGCCCTCACAAAGGAA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTTGTTCCCTGTCTTGTaGATGTGCAGTGGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTLFPVL*MCSGRW
Trigger: CCAGCGCCCACTGCACATCAACAAGACAGGGAACAA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGCCCAGGGCAGTGTTGTaGGCATTGTTGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQPRAVL*ALLMLA
Trigger: TGCCAACATCAACAATGCCAACAACACTGCCCTGGG...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCTCTGGGCAGGTCAGTaGTCGGTGTTCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTLWAGQ*SVFIFL
Trigger: CAGGAAGATGAACACCGACAACTGACCTGCCCAGAG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GACCAGGCAGAAAGGGATTTAACTGGACTTGTCTGTTACTTGGACTGTGTCATGGATGGGAAGCTGCTGTaGAGTTTCTCGCTGGACTCT +
Preference number: 5 (lower is better)
Translates to: DQAERDLTGLVCYLDCVMDGKLL*SFSLDS
Trigger: AGAGTCCAGCGAGAAACTCAACAGCAGCTTCCCATC...CATGACACAGTCCAAGTAACAGACAAGTCCAGTTAAATCCCTTTCTGCCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGGATGAACTTGGGATCTaGAGCAAACTGTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWDELGI*SKLSQS
Trigger: GGACTGGGACAGTTTGCTCAAGATCCCAAGTTCATC...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGTCTCCATCTCCTCTATaGTCATGTCGCAGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQSPSPL*SCRRRQ
Trigger: CTGACGCCTGCGACATGACAATAGAGGAGATGGAGA...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGGCTTCATGTACCACCTaGCCCTTGAACTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWASCTT*PLNFLS
Trigger: AGAGAGGAAGTTCAAGGGCAAGGTGGTACATGAAGC...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTCCACTCGTTCCAGGTaGGAGTTGGTGGCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPSTRSR*ELVALE
Trigger: CTCCAACGCCACCAACTCCAACCTGGAACGAGTGGA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTTGGTGATGCCGTGCTaGGGCCCATCCCACCCGGGT +
Preference number: 5 (lower is better)
Translates to: IQSNQIRLKYANANVETVLVMPC*GPSHPG
Trigger: ACCCGGGTGGGATGGGCCCAAGCACGGCATCACCAA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGGCTTTCTCCCTCTCTTaGGAAAACTCCCCGCTCAAA +
Preference number: 5 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLAFSLS*ENSPLK
Trigger: TTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAGC...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
CDS-3UTR CAA 90 bp GACCAGGCAGAAAGGGATTTAACTGGACTTGTCTGTTACTTGGACTGTGTCATGGCTTTCTCCCTCTCTTaGGAAAACTCCCCGCTCAAA +
Preference number: 5 (lower is better)
Translates to: DQAERDLTGLVCYLDCVMAFSLS*ENSPLK
Trigger: TTTGAGCGGGGAGTTTTCCAAAGAGAGGGAGAAAGC...CATGACACAGTCCAAGTAACAGACAAGTCCAGTTAAATCCCTTTCTGCCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGAAATCTCCTCGGGCTTaGGCTTTCTCCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQKSPRA*AFSLSL
Trigger: CAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATTT...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGAAATCTCCTCGGGCTTaGGCTTTCTCCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEKSPRA*AFSLSL
Trigger: CAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATTT...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCTCATGTTTCGAGGCTaGTCTTCATCCATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTLMFRG*SSSMPS
Trigger: CGAGGGCATGGATGAAGACAAGCCTCGAAACATGAG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCGGCTGAATTTGGATTaGGAGATCCGATGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTRLNLD*EIRWAS
Trigger: GCTTGCCCATCGGATCTCCAAATCCAAATTCAGCCG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATTTATTGGCTGTGTCTaGCACTTCTGTGAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQFIGCV*HFCEPV
Trigger: CACTGGCTCACAGAAGTGCAAGACACAGCCAATAAA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATCCGCATCAGCCAGGTaGTCCACCGCAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKSASAR*STAMAK
Trigger: CTTGGCCATTGCGGTGGACAACCTGGCTGATGCGGA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCCTGCAGTGTCTGGGTaGGAGTGGGGACTCTTATCC +
Preference number: 5 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPPAVSG*EWGLLS
Trigger: GGATAAGAGTCCCCACTCCAACCCAGACACTGCAGG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTACCTGCAGTGTCTGGGTaGGAGTGGGGACTCTTATCC +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVPAVSG*EWGLLS
Trigger: GGATAAGAGTCCCCACTCCAACCCAGACACTGCAGG...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTACATGCTTTAGCCCCTaGGCCCTGTTGATGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPTCFSP*ALLMAL
Trigger: GAGGGCCATCAACAGGGCCAAGGGGCTAAAGCATGT...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAACATGCTTTAGCCCCTaGGCCCTGTTGATGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVTCFSP*ALLMAL
Trigger: GAGGGCCATCAACAGGGCCAAGGGGCTAAAGCATGT...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTACTGGTGCTGGTTCTaGGGGATGTACCTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTYWCWF*GMYLRK
Trigger: CTTGCGAAGGTACATCCCCAAGAACCAGCACCAGTA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CTTAACATCAGCTTCCGTGGGCTTGGAGTAGCTCTTTTGAAATCCAGACACTCCGGGAACGTCTGGAAGTaGTTGTTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: LNISFRGLGVALLKSRHSGNVWK*LFRLIS
Trigger: AGAGATCAATCGGAACAACAACTTCCAGACGTTCCC...GGAGTGTCTGGATTTCAAAAGAGCTACTCCAAGCCCACGGAAGCTGATGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAAACAGCTACAAAGAGGTaGATGATCAGGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQTATKR*MIRKAQ
Trigger: CTGTGCCTTCCTGATCATCAACCTCTTTGTAGCTGT...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTGTTTGATCCGACCCTaGGCTTCAGGGTCATACTCG +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTCLIRP*ASGSYS
Trigger: CGAGTATGACCCTGAAGCCAAGGGTCGGATCAAACA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCAGGTTCCCTTCTGTTTaGATCCTCAGGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTRFPSV*ILRAVL
Trigger: CAGGACAGCCCTGAGGATCAAAACAGAAGGGAACCT...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATCAGTGTCAGCTTGGTaGTTCCCTGTCTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQSVSAW*FPVLLM
Trigger: CATCAACAAGACAGGGAACAACCAAGCTGACACTGA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGGATGAACTTGGGATCTaGAGCAAACTGTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEDELGI*SKLSQS
Trigger: GGACTGGGACAGTTTGCTCAAGATCCCAAGTTCATC...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTTTGGAGTTGGTGGCGTaGGAGTCGTCTTCCGGAAAG +
Preference number: 5 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPLELVA*ESSSGK
Trigger: CTTTCCGGAAGACGACTCCAACGCCACCAACTCCAA...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCAAATCTCCTCGGGCTTaGGCTTTCTCCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTKSPRA*AFSLSL
Trigger: CAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATTT...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GACCAGGCAGAAAGGGATTTAACTGGACTTGTCTGTTACTTGGACTGTGTCATGTTTATTGGCTGTGTCTaGCACTTCTGTGAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: DQAERDLTGLVCYLDCVMFIGCV*HFCEPV
Trigger: CACTGGCTCACAGAAGTGCAAGACACAGCCAATAAA...CATGACACAGTCCAAGTAACAGACAAGTCCAGTTAAATCCCTTTCTGCCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp CACATACCACGTGGGTGCACATACGCACATACTATGGACACAAGTGTGACACAATGCATCTCATCGAAATaGAACTTCCCTCCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: HIPRGCTYAHTMDTSVTQCISSK*NFPPKS
Trigger: GCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGCA...TTGTGTCACACTTGTGTCCATAGTATGTGCGTATGTGCACCCACGTGGTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AAACACAAGATATGCAAAATGGCACCTCCCCTCTCTCTGGAAAGCAGAGTGAGGTGCATCTCATCGAAATaGAACTTCCCTCCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: KHKICKMAPPLSLESRVRCISSK*NFPPKS
Trigger: GCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGCA...CCTCACTCTGCTTTCCAGAGAGAGGGGAGGTGCCATTTTGCATATCTTGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTGCAGTGTCTGGGTaGGAGTGGGGACTCTTATCC +
Preference number: 5 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKPAVSG*EWGLLS
Trigger: GGATAAGAGTCCCCACTCCAACCCAGACACTGCAGG...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAACATGCTTTAGCCCCTaGGCCCTGTTGATGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKTCFSP*ALLMAL
Trigger: GAGGGCCATCAACAGGGCCAAGGGGCTAAAGCATGT...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGATATTCATGGCGATTTaGAAGAGGCAGCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQIFMAI*KRQLWP
Trigger: TGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATAT...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGACAGCTACAAAGAGGTaGATGATCAGGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLTATKR*MIRKAQ
Trigger: CTGTGCCTTCCTGATCATCAACCTCTTTGTAGCTGT...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCACCACATCCAAGTGTTaGATCCGACCCTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTTTSKC*IRPLAS
Trigger: TGAAGCCAAGGGTCGGATCAAACACTTGGATGTGGT...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTCAGTGTCAGCTTGGTaGTTCCCTGTCTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLSVSAW*FPVLLM
Trigger: CATCAACAAGACAGGGAACAACCAAGCTGACACTGA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGGCAGTGTTGTTGGCATaGTTGATGTTGGCATTGGAG +
Preference number: 5 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEAVLLA*LMLALE
Trigger: CTCCAATGCCAACATCAACAATGCCAACAACACTGC...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGGCAGTGTTGTTGGCATaGTTGATGTTGGCATTGGAG +
Preference number: 5 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQAVLLA*LMLALE
Trigger: CTCCAATGCCAACATCAACAATGCCAACAACACTGC...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTACCTCTGTTTCGAGGCTaGTCTTCATCCATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVPLFRG*SSSMPS
Trigger: CGAGGGCATGGATGAAGACAAGCCTCGAAACAGAGG...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000112825.9
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp AGCCAAGCTCCCCCAACTACTTCTCCATTGGCAAATTCTTTGGCAGACACAGTGGTAGAAACAGTTGAGTaGAGCTTCATGTACCACCTT +
Preference number: 5 (lower is better)
Translates to: SQAPPTTSPLANSLADTVVETVE*SFMYHL
Trigger: AAGGTGGTACATGAAGCTCAACTCAACTGTTTCTAC...CACTGTGTCTGCCAAAGAATTTGCCAATGGAGAAGTAGTTGGGGGAGCTTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCCCCATCAGCTTTGGTaGCTTGTTCTAAAATTGCAC +
Preference number: 5 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLPHQLW*LVLKLH
Trigger: GTGCAATTTTAGAACAAGCAACCAAAGCTGATGGGG...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGACAGCCCCATCAGCTTTGGTaGCTTGTTCTAAAATTGCAC +
Preference number: 5 (lower is better)
Translates to: GTEKCSYRFSFQKQKQRQPHQLW*LVLKLH
Trigger: GTGCAATTTTAGAACAAGCAACCAAAGCTGATGGGG...CTGTCTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp GACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGCTCCAGTGGTTGGCCCCATCAGCTTaGGTTGCTTGTTCTAAAATT +
Preference number: 5 (lower is better)
Translates to: DTEQVKPFSGDIEPLLQWLAPSA*VACSKI
Trigger: AATTTTAGAACAAGCAACCAAAGCTGATGGGGCCAA...CCACTGGAGCAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCGGCTGAATTTGGATTaGGAGATCCGATGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPRLNLD*EIRWAS
Trigger: GCTTGCCCATCGGATCTCCAAATCCAAATTCAGCCG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTTTATTGGCTGTGTCTaGCACTTCTGTGAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTFIGCV*HFCEPV
Trigger: CACTGGCTCACAGAAGTGCAAGACACAGCCAATAAA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATCAATTTTCTCCTCTTaGCTCTCCTCCACGGCTGGC +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVSIFSS*LSSTAG
Trigger: GCCAGCCGTGGAGGAGAGCAAAGAGGAGAAAATTGA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATGGAGGTCATCCATGTaGATCTTGGTAGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVWRSSM*ILVVGG
Trigger: CCCACCCACTACCAAGATCAACATGGATGACCTCCA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGTTGTCAAAGTCAAACTaGCTGTTCTCCCAGCTTCGA +
Preference number: 5 (lower is better)
Translates to: SWDRKMQLPILVSEAEAELSKSN*LFSQLR
Trigger: TCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACAA...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGTTGTCAAAGTCAAACTaGCTGTTCTCCCAGCTTCGA +
Preference number: 5 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLLSKSN*LFSQLR
Trigger: TCGAAGCTGGGAGAACAGCAAGTTTGACTTTGACAA...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATACTGGTGCTGGTTCTaGGGGATGTACCTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVYWCWF*GMYLRK
Trigger: CTTGCGAAGGTACATCCCCAAGAACCAGCACCAGTA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCATATTCATGGCGATTTaGAAGAGGCAGCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTIFMAI*KRQLWP
Trigger: TGGCCAGAGCTGCCTCTTCAAAATCGCCATGAATAT...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCCATAGAGGGAGAGCATaGGGTATGTTCAGCTGGATT +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTHRGRA*GMFSWI
Trigger: AATCCAGCTGAACATACCCAATGCTCTCCCTCTATG...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR CAA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGCCTCCTTCATAGCCTaGTCCAACTCCTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKASFIA*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGACAAGGCTATGAAGGAGGC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTACCCAGGGCAGTGTTGTaGGCATTGTTGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVPRAVL*ALLMLA
Trigger: TGCCAACATCAACAATGCCAACAACACTGCCCTGGG...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTGATGGGAAGCTGCTGTaGAGTTTCTCGCTGGACTCT +
Preference number: 5 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPDGKLL*SFSLDS
Trigger: AGAGTCCAGCGAGAAACTCAACAGCAGCTTCCCATC...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATTCCCTCCTAGAGCATaGGCCCCATCAGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKFPPRA*APSALV
Trigger: AACCAAAGCTGATGGGGCCAATGCTCTAGGAGGGAA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCTGCATCTCATCGAAATaGAACTTCCCTCCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTCISSK*NFPPKS
Trigger: GCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGCA...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCGCAAGGGTCGGGCCTaGAGGGCATATTCCACACAT +
Preference number: 5 (lower is better)
Translates to: IQSNQIRLKYANANVETVRKGRA*RAYSTH
Trigger: ATGTGTGGAATATGCCCTCAAGGCCCGACCCTTGCG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATACTGGTGCTGGTTCTaGGGGATGTACCTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKYWCWF*GMYLRK
Trigger: CTTGCGAAGGTACATCCCCAAGAACCAGCACCAGTA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAACCACGTACCACACTTaGTACTGGTGCTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVTTYHT*YWCWFL
Trigger: CAAGAACCAGCACCAGTACAAAGTGTGGTACGTGGT...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TCGTGGGACAGAAAAATGCAGTTACCGATTCTCGTTTCAGAAGCAGAAGCAGAGAAGTTGTTGTTCCGATaGATCTCTGTGGTGTCATTC +
Preference number: 5 (lower is better)
Translates to: SWDRKMQLPILVSEAEAEKLLFR*ISVVSF
Trigger: GAATGACACCACAGAGATCAATCGGAACAACAACTT...CTCTGCTTCTGCTTCTGAAACGAGAATCGGTAACTGCATTTTTCTGTCCCACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000078320.14
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TACTGGGCAGACACAGAGCAGGTAAAACCTTTCTCTGGTGATATTGAACCCTTGAAGTTGTTGTTCCGATaGATCTCTGTGGTGTCATTC +
Preference number: 5 (lower is better)
Translates to: YWADTEQVKPFSGDIEPLKLLFR*ISVVSF
Trigger: GAATGACACCACAGAGATCAATCGGAACAACAACTT...CAAGGGTTCAATATCACCAGAGAAAGGTTTTACCTGCTCTGTGTCTGCCCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAACCACATCCAAGTGTTaGATCCGACCCTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVTTSKC*IRPLAS
Trigger: TGAAGCCAAGGGTCGGATCAAACACTTGGATGTGGT...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTACCACATCCAAGTGTTaGATCCGACCCTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPTTSKC*IRPLAS
Trigger: TGAAGCCAAGGGTCGGATCAAACACTTGGATGTGGT...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAAGGTTCCCTTCTGTTTaGATCCTCAGGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKRFPSV*ILRAVL
Trigger: CAGGACAGCCCTGAGGATCAAAACAGAAGGGAACCT...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGATGGGAAGCTGCTGTaGAGTTTCTCGCTGGACTCT +
Preference number: 5 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKDGKLL*SFSLDS
Trigger: AGAGTCCAGCGAGAAACTCAACAGCAGCTTCCCATC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATGTACCACCTTGCCCTaGAACTTCCTCTCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVCTTLP*NFLSVS
Trigger: GGAAACAGAGAGGAAGTTCAAGGGCAAGGTGGTACA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186889.7
CDS-3UTR CAA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTTGGAGTTGGTGGCGTaGGAGTCGTCTTCCGGAAAG +
Preference number: 5 (lower is better)
Translates to: IQSNQIRLKYANANVETVLELVA*ESSSGK
Trigger: CTTTCCGGAAGACGACTCCAACGCCACCAACTCCAA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
CDS-3UTR CAA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAAAATCTCCTCGGGCTTaGGCTTTCTCCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKKSPRA*AFSLSL
Trigger: CAAAGAGAGGGAGAAAGCCAAAGCCCGAGGAGATTT...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTAAAATCTTCACAACGTaGATCGCGCTGGACTGGATG +
Preference number: 5 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPKIFTT*IALDWM
Trigger: CATCCAGTCCAGCGCGATCAACGTTGTGAAGATTTT...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAATCTTCACAACGTaGATCGCGCTGGACTGGATG +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVKIFTT*IALDWM
Trigger: CATCCAGTCCAGCGCGATCAACGTTGTGAAGATTTT...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATAAAGAAACCAAACCCCAGAAAGTCGCAACATGCTGACAAGAACCCTCAAACCATGGCTGCCAAAACATaGTCAAAGTCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: IKKPNPRKSQHADKNPQTMAAKT*SKSNLL
Trigger: CAGCAAGTTTGACTTTGACAATGTTTTGGCAGCCAT...GGTTTGAGGGTTCTTGTCAGCATGTTGCGACTTTCTGGGGTTTGGTTTCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTCATAGAGGGAGAGCATaGGGTATGTTCAGCTGGATT +
Preference number: 5 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPHRGRA*GMFSWI
Trigger: AATCCAGCTGAACATACCCAATGCTCTCCCTCTATG...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAGGGAACGTCTGGAAGTaGTTGTTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVGNVWK*LFRLIS
Trigger: AGAGATCAATCGGAACAACAACTTCCAGACGTTCCC...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTACAGCTACAAAGAGGTaGATGATCAGGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPTATKR*MIRKAQ
Trigger: CTGTGCCTTCCTGATCATCAACCTCTTTGTAGCTGT...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTATCAGTGTCAGCTTGGTaGTTCCCTGTCTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVSVSAW*FPVLLM
Trigger: CATCAACAAGACAGGGAACAACCAAGCTGACACTGA...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAACCTGCAGTGTTGTTGGCATaGTTGATGTTGGCATTGGAG +
Preference number: 5 (lower is better)
Translates to: LLKEIGTSYWADTEQVKPAVLLA*LMLALE
Trigger: CTCCAATGCCAACATCAACAATGCCAACAACACTGC...AGGTTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGATGAACTTGGGATCTaGAGCAAACTGTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKDELGI*SKLSQS
Trigger: GGACTGGGACAGTTTGCTCAAGATCCCAAGTTCATC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCCTCTGTTTCGAGGCTaGTCTTCATCCATGCCCTCG +
Preference number: 5 (lower is better)
Translates to: IQSNQIRLKYANANVETVPLFRG*SSSMPS
Trigger: CGAGGGCATGGATGAAGACAAGCCTCGAAACAGAGG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000112825.9
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCGGCTGAATTTGGATTaGGAGATCCGATGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: IQSNQIRLKYANANVETVRLNLD*EIRWAS
Trigger: GCTTGCCCATCGGATCTCCAAATCCAAATTCAGCCG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAGGGAACGTCTGGAAGTaGTTGTTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKGNVWK*LFRLIS
Trigger: AGAGATCAATCGGAACAACAACTTCCAGACGTTCCC...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCCCAGGGCAGTGTTGTaGGCATTGTTGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: IQSNQIRLKYANANVETVPRAVL*ALLMLA
Trigger: TGCCAACATCAACAATGCCAACAACACTGCCCTGGG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGGATGGGAAGCTGCTGTaGAGTTTCTCGCTGGACTCT +
Preference number: 5 (lower is better)
Translates to: IQSNQIRLKYANANVETVDGKLL*SFSLDS
Trigger: AGAGTCCAGCGAGAAACTCAACAGCAGCTTCCCATC...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAATGCATCTCATCGAAATaGAACTTCCCTCCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKCISSK*NFPPKS
Trigger: GCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGCA...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGGTGAAGATCGTGTCATaGACAATACGGTGGCACTGC +
Preference number: 5 (lower is better)
Translates to: IQSNQIRLKYANANVETVVKIVS*TIRWHC
Trigger: GCAGTGCCACCGTATTGTCAATGACACGATCTTCAC...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp TTGCTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAGTTGTTGTTCCGATaGATCTCTGTGGTGTCATTC +
Preference number: 5 (lower is better)
Translates to: LLLLKEIGTSYWADTEQVKLLFR*ISVVSF
Trigger: GAATGACACCACAGAGATCAATCGGAACAACAACTT...TACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGTTTATTGGCTGTGTCTaGCACTTCTGTGAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: IQSNQIRLKYANANVETVFIGCV*HFCEPV
Trigger: CACTGGCTCACAGAAGTGCAAGACACAGCCAATAAA...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAATGGCTGCCAAAACATaGTCAAAGTCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKMAAKT*SKSNLL
Trigger: CAGCAAGTTTGACTTTGACAATGTTTTGGCAGCCAT...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp CTTTTACTTAAGGAAATTGGAACAAGTTACTGGGCAGACACAGAGCAGGTAAAAAAGTTGTTGTTCCGATaGATCTCTGTGGTGTCATTC +
Preference number: 5 (lower is better)
Translates to: LLLKEIGTSYWADTEQVKKLLFR*ISVVSF
Trigger: GAATGACACCACAGAGATCAATCGGAACAACAACTT...TTTTACCTGCTCTGTGTCTGCCCAGTAACTTGTTCCAATTTCCTTAAGTAAAAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGGGGAACGTCTGGAAGTaGTTGTTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: IQSNQIRLKYANANVETVGNVWK*LFRLIS
Trigger: AGAGATCAATCGGAACAACAACTTCCAGACGTTCCC...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGGCAGTGTTGTTGGCATaGTTGATGTTGGCATTGGAG +
Preference number: 5 (lower is better)
Translates to: IQSNQIRLKYANANVETVAVLLA*LMLALE
Trigger: CTCCAATGCCAACATCAACAATGCCAACAACACTGC...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCCCCATCAGCTTTGGTaGCTTGTTCTAAAATTGCAC +
Preference number: 5 (lower is better)
Translates to: IQSNQIRLKYANANVETVPHQLW*LVLKLH
Trigger: GTGCAATTTTAGAACAAGCAACCAAAGCTGATGGGG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS-3UTR CAA 90 bp ATACAATCAAACCAAATCCGACTTAAATACGCAAATGCAAATGTGGAAACAGTGCCGGTGAAAAGCATGTaGAGTATATTCATGGCGATT +
Preference number: 5 (lower is better)
Translates to: IQSNQIRLKYANANVETVPVKSM*SIFMAI
Trigger: AATCGCCATGAATATACTCAACATGCTTTTCACCGG...CACTGTTTCCACATTTGCATTTGCGTATTTAAGTCGGATTTGGTTTGATTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112825.9
ENSMUST00000186889.7
ENSMUST00000187940.7
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 72 bp GAGCGCCTCCTCGCTCCGGCCTCGCCCCAGGGCATATaGGCAGCTCTCGTCCTCTGGGGCCACAGCCCTGTC +
Preference number: 6 (lower is better)
Translates to: ERLLAPASPQGI*AALVLWGHSPV
Trigger: GACAGGGCTGTGGCCCCAGAGGACGAGAGCTGCGCATATGCCCTGGGGCGAGGCCGGAGCGAGGAGGCGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS TCA 72 bp CAGGGGACAAGGGAGGCCCATGGCCCTCCACAGTGCTaGCCGTGCTGGAGTAGCCAGCGGGATGGGGGAAGC +
Preference number: 6 (lower is better)
Translates to: QGTREAHGPPQC*PCWSSQRDGGS
Trigger: GCTTCCCCCATCCCGCTGGCTACTCCAGCACGGTCAGCACTGTGGAGGGCCATGGGCCTCCCTTGTCCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 72 bp CCGGGCGGCATCGATGGCTGCCTGCCAGGACAGTGCTaGCCCTGGAGTAGGGATGTGCTCGGGAGCAAGTCC +
Preference number: 6 (lower is better)
Translates to: PGGIDGCLPGQC*PWSRDVLGSKS
Trigger: GGACTTGCTCCCGAGCACATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS GCA 72 bp CTGCCGGGCGGCATCGATGGCTGCCTGCCAGGACAGTaGTGCCCCTGGAGTAGGGATGTGCTCGGGAGCAAG +
Preference number: 6 (lower is better)
Translates to: LPGGIDGCLPGQ*CPWSRDVLGSK
Trigger: CTTGCTCCCGAGCACATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS GCA 72 bp GCCCATGAGCTTGGCCTGCCGGGCGGCATCGATGGCTaGCTGCCAGGACAGTGCTGCCCCTGGAGTAGGGAT +
Preference number: 6 (lower is better)
Translates to: AHELGLPGGIDG*LPGQCCPWSRD
Trigger: ATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGCAGGCCAAGCTCATGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS GCA 72 bp GACACAGCAGAGCCCGGGGCGGCCGTGTGGCGGTTGTaGCCCCCTGCTTCTTGGGTTTCCCATACTGCTGCC +
Preference number: 6 (lower is better)
Translates to: DTAEPGAAVWRL*PPASWVSHTAA
Trigger: GGCAGCAGTATGGGAAACCCAAGAAGCAGGGGGGCACAACCGCCACACGGCCGCCCCGGGCTCTGCTGTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS GCA 72 bp ATGGTTGCGTTGCCAGCACTGCCCATGAGCTTGGCCTaGCGGGCGGCATCGATGGCTGCCTGCCAGGACAGT +
Preference number: 6 (lower is better)
Translates to: MVALPALPMSLA*RAASMAACQDS
Trigger: ACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGCAGGCCAAGCTCATGGGCAGTGCTGGCAACGCAACCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS CCA 72 bp GGCATCGATGGCTGCCTGCCAGGACAGTGCTGCCCCTaGAGTAGGGATGTGCTCGGGAGCAAGTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: GIDGCLPGQCCP*SRDVLGSKSCS
Trigger: GCTGCAGGACTTGCTCCCGAGCACATCCCTACTCCAGGGGCAGCACTGTCCTGGCAGGCAGCCATCGATGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS TCA 72 bp AGAGGGTGCCGTTGGGGCTCTGCTGGGCGCCCCCACTaGGGATGTTGTCTGCGGCGTTCTCCATCTCCTCTA +
Preference number: 6 (lower is better)
Translates to: RGCRWGSAGRPH*GCCLRRSPSPL
Trigger: TAGAGGAGATGGAGAACGCCGCAGACAACATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGGCACCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CAA 90 bp GAACTGACGGTAGAGATGGTTGCGTTGCCAGCACTGCCCATGAGCTaGGCCTGCCGGGCGGCATCGATGGCTGCCTGCCAGGACAGTGCT +
Preference number: 6 (lower is better)
Translates to: ELTVEMVALPALPMS*ACRAASMAACQDSA
Trigger: AGCACTGTCCTGGCAGGCAGCCATCGATGCCGCCCGGCAGGCCAAGCTCATGGGCAGTGCTGGCAACGCAACCATCTCTACCGTCAGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS CAA 90 bp TGCTGCCGCTTCCGCTGTGTGGAACTGACGGTAGAGATGGTTGCGTaGCCAGCACTGCCCATGAGCTTGGCCTGCCGGGCGGCATCGATG +
Preference number: 6 (lower is better)
Translates to: CCRFRCVELTVEMVA*PALPMSLACRAASM
Trigger: CATCGATGCCGCCCGGCAGGCCAAGCTCATGGGCAGTGCTGGCAACGCAACCATCTCTACCGTCAGTTCCACACAGCGGAAGCGGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS CAA 90 bp AAGAGGGTGCCGTTGGGGCTCTGCTGGGCGCCCCCACTGAGGATGTaGTCTGCGGCGTTCTCCATCTCCTCTATTGTCATGTCGCAGGCG +
Preference number: 6 (lower is better)
Translates to: KRVPLGLCWAPPLRM*SAAFSISSIVMSQA
Trigger: CGCCTGCGACATGACAATAGAGGAGATGGAGAACGCCGCAGACAACATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGGCACCCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS TCA 72 bp GGCCCATCCCACCCGGGTTTGCACACGGTCCCGTTCTaGCACTGTCGCCCATGGCCTGTCTCCAAAGCACAA +
Preference number: 6 (lower is better)
Translates to: GPSHPGLHTVPF*HCRPWPVSKAQ
Trigger: TTGTGCTTTGGAGACAGGCCATGGGCGACAGTGTCAGAACGGGACCGTGTGCAAACCCGGGTGGGATGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS TCA 72 bp CGGAAGCTGAGGGCCAGAGAGGCCCTCTACGGAGGCTaGCTTCAGGACTCAGGTTGGAGTTGGTGGCGTTGG +
Preference number: 6 (lower is better)
Translates to: RKLRAREALYGG*LQDSGWSWWRW
Trigger: CCAACGCCACCAACTCCAACCTGAGTCCTGAAGTCAGCCTCCGTAGAGGGCCTCTCTGGCCCTCAGCTTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239204.2
CDS CCA 72 bp GGTCTCCCCTTCCGTGCTGTTGCTGGGCTCAGACTCTaGGGCACACTTCTTGCCTGGCATGCAGGCCAGCAT +
Preference number: 6 (lower is better)
Translates to: GLPFRAVAGLRL*GTLLAWHAGQH
Trigger: ATGCTGGCCTGCATGCCAGGCAAGAAGTGTGCCCCAGAGTCTGAGCCCAGCAACAGCACGGAAGGGGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 72 bp AGCTGGGCTGGGTTCCCAGGGCTCTGGAAATCAGGGTaGATAAGACGTGGGTGGCTAGAGGGGGAGCCACAG +
Preference number: 6 (lower is better)
Translates to: SWAGFPGLWKSG*IRRGWLEGEPQ
Trigger: CTGTGGCTCCCCCTCTAGCCACCCACGTCTTATCCACCCTGATTTCCAGAGCCCTGGGAACCCAGCCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112793.10
ENSMUST00000220022.2
CDS CAA 72 bp TTCCGCTGTGTGGAACTGACGGTAGAGATGGTTGCGTaGCCAGCACTGCCCATGAGCTTGGCCTGCCGGGCG +
Preference number: 6 (lower is better)
Translates to: FRCVELTVEMVA*PALPMSLACRA
Trigger: CGCCCGGCAGGCCAAGCTCATGGGCAGTGCTGGCAACGCAACCATCTCTACCGTCAGTTCCACACAGCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS GCA 72 bp TCGGGAGTGGCACCTCTTAGAGCTGAGCTTCCATGCTaGCTCCTGTACTCGGACAGCAGGGGACAAGGGAGG +
Preference number: 6 (lower is better)
Translates to: SGVAPLRAELPC*LLYSDSRGQGR
Trigger: CCTCCCTTGTCCCCTGCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGCTCTAAGAGGTGCCACTCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 72 bp CTCTCGGGAGTGGCACCTCTTAGAGCTGAGCTTCCATaGTGCCTCCTGTACTCGGACAGCAGGGGACAAGGG +
Preference number: 6 (lower is better)
Translates to: LSGVAPLRAELP*CLLYSDSRGQG
Trigger: CCCTTGTCCCCTGCTGTCCGAGTACAGGAGGCAGCATGGAAGCTCAGCTCTAAGAGGTGCCACTCCCGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 72 bp GGGGCTCTGCTGGGCGCCCCCACTGAGGATGTTGTCTaGGGCGTTCTCCATCTCCTCTATTGTCATGTCGCA +
Preference number: 6 (lower is better)
Translates to: GALLGAPTEDVV*GVLHLLYCHVA
Trigger: TGCGACATGACAATAGAGGAGATGGAGAACGCCGCAGACAACATCCTCAGTGGGGGCGCCCAGCAGAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CAA 72 bp CCGTTGGGGCTCTGCTGGGCGCCCCCACTGAGGATGTaGTCTGCGGCGTTCTCCATCTCCTCTATTGTCATG +
Preference number: 6 (lower is better)
Translates to: PLGLCWAPPLRM*SAAFSISSIVM
Trigger: CATGACAATAGAGGAGATGGAGAACGCCGCAGACAACATCCTCAGTGGGGGCGCCCAGCAGAGCCCCAACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS TCA 72 bp GGGGGAAGCGGCCCAGGGCAGTGTTGTTGGCATTGTTaGTGTTGGCATTGGAGCCCGTGGATGAGTAGCTGC +
Preference number: 6 (lower is better)
Translates to: GGSGPGQCCWHC*CWHWSPWMSSC
Trigger: GCAGCTACTCATCCACGGGCTCCAATGCCAACATCAACAATGCCAACAACACTGCCCTGGGCCGCTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CAA 90 bp GAGTCCACCAGCTTCTCATGGGACGGTGACTCAGTGTCAGCTTGGTaGTTCCCTGTCTTGTTGATGTGCAGTGGGCGCTGGGTGGCGAAC +
Preference number: 6 (lower is better)
Translates to: ESTSFSWDGDSVSAW*FPVLLMCSGRWVAN
Trigger: GTTCGCCACCCAGCGCCCACTGCACATCAACAAGACAGGGAACAACCAAGCTGACACTGAGTCACCGTCCCATGAGAAGCTGGTGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 72 bp TGGAGTAGGGATGTGCTCGGGAGCAAGTCCTGCAGCTaGATTGGCATTCATGTTGGCATGAGCTGGGCGTGG +
Preference number: 6 (lower is better)
Translates to: WSRDVLGSKSCS*IGIHVGMSWAW
Trigger: CCACGCCCAGCTCATGCCAACATGAATGCCAATGCAGCTGCAGGACTTGCTCCCGAGCACATCCCTACTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000239204.2
CDS GCA 72 bp CCAGTCCTTCTGAAATCAAGACCGCTTCCACCAGGCTaGTGGCACTGCCATGGAACTGTCTCCCTGGAGCTC +
Preference number: 6 (lower is better)
Translates to: PVLLKSRPLPPG*WHCHGTVSLEL
Trigger: GAGCTCCAGGGAGACAGTTCCATGGCAGTGCCAGCAGCCTGGTGGAAGCGGTCTTGATTTCAGAAGGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 72 bp TGTAGATGGGGCCCTTGTCTTCTGTGTGGGAGTCAATaGAGCGGTACAGCAGCTCTGGCCACCCTTCGAAGG +
Preference number: 6 (lower is better)
Translates to: CRWGPCLLCGSQ*SGTAALATLRR
Trigger: CCTTCGAAGGGTGGCCAGAGCTGCTGTACCGCTCCATTGACTCCCACACAGAAGACAAGGGCCCCATCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 72 bp CCAGGGCTCTGGAAATCAGGGTGGATAAGACGTGGGTaGCTAGAGGGGGAGCCACAGAAGCTGGAAATGTGG +
Preference number: 6 (lower is better)
Translates to: PGLWKSGWIRRG*LEGEPQKLEMW
Trigger: CCACATTTCCAGCTTCTGTGGCTCCCCCTCTAGCCACCCACGTCTTATCCACCCTGATTTCCAGAGCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112793.10
ENSMUST00000220022.2
CDS CCA 72 bp AGAACAAGAGTATCCCAAGGCACTGCAGCGTCCTCATaGTGTCGGAAGCTGAGGGCCAGAGAGGCCCTCTAC +
Preference number: 6 (lower is better)
Translates to: RTRVSQGTAASS*CRKLRAREALY
Trigger: GTAGAGGGCCTCTCTGGCCCTCAGCTTCCGACACCATGAGGACGCTGCAGTGCCTTGGGATACTCTTGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239204.2
CDS CAA 72 bp AGAGGCCCTCTACGGAGGCTGACTTCAGGACTCAGGTaGGAGTTGGTGGCGTTGGAGTCGTCTTCCGGAAAG +
Preference number: 6 (lower is better)
Translates to: RGPLRRLTSGLR*ELVALESSSGK
Trigger: CTTTCCGGAAGACGACTCCAACGCCACCAACTCCAACCTGAGTCCTGAAGTCAGCCTCCGTAGAGGGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239204.2
CDS TCA 72 bp GTGACTCAGTGTCAGCTTGGTTGTTCCCTGTCTTGTTaGTGTGCAGTGGGCGCTGGGTGGCGAACGTCTGAG +
Preference number: 6 (lower is better)
Translates to: VTQCQLGCSLSC*CAVGAGWRTSE
Trigger: CTCAGACGTTCGCCACCCAGCGCCCACTGCACATCAACAAGACAGGGAACAACCAAGCTGACACTGAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 72 bp GTCAGCTTGGTTGTTCCCTGTCTTGTTGATGTGCAGTaGGCGCTGGGTGGCGAACGTCTGAGGAAAGTTGCC +
Preference number: 6 (lower is better)
Translates to: VSLVVPCLVDVQ*ALGGERLRKVA
Trigger: GGCAACTTTCCTCAGACGTTCGCCACCCAGCGCCCACTGCACATCAACAAGACAGGGAACAACCAAGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 72 bp GTTCCCAGGGCTCTGGAAATCAGGGTGGATAAGACGTaGGTGGCTAGAGGGGGAGCCACAGAAGCTGGAAAT +
Preference number: 6 (lower is better)
Translates to: VPRALEIRVDKT*VARGGATEAGN
Trigger: ATTTCCAGCTTCTGTGGCTCCCCCTCTAGCCACCCACGTCTTATCCACCCTGATTTCCAGAGCCCTGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112793.10
ENSMUST00000220022.2
CDS CCA 72 bp ACCAGCTTCTCATGGGACGGTGACTCAGTGTCAGCTTaGTTGTTCCCTGTCTTGTTGATGTGCAGTGGGCGC +
Preference number: 6 (lower is better)
Translates to: TSFSWDGDSVSA*LFPVLLMCSGR
Trigger: GCGCCCACTGCACATCAACAAGACAGGGAACAACCAAGCTGACACTGAGTCACCGTCCCATGAGAAGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CAA 72 bp AGCTTCTCATGGGACGGTGACTCAGTGTCAGCTTGGTaGTTCCCTGTCTTGTTGATGTGCAGTGGGCGCTGG +
Preference number: 6 (lower is better)
Translates to: SFSWDGDSVSAW*FPVLLMCSGRW
Trigger: CCAGCGCCCACTGCACATCAACAAGACAGGGAACAACCAAGCTGACACTGAGTCACCGTCCCATGAGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CAA 72 bp GCGGGAGTTCTCCTCTGCACTCATAGAGGGAGAGCATaGGGTATGTTCAGCTGGGTGTACCTCGGTGATTGC +
Preference number: 6 (lower is better)
Translates to: AGVLLCTHRGRA*GMFSWVYLGDC
Trigger: GCAATCACCGAGGTACACCCAGCTGAACATACCCAATGCTCTCCCTCTATGAGTGCAGAGGAGAACTCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000112790.9
ENSMUST00000185345.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
CDS TCA 72 bp TTCTGCAGAATCGATTCCACCTGCGCCAGTAGCGGCTaGATTTGGATTTGGAGATCCGATGGGCAAGCCTGG +
Preference number: 6 (lower is better)
Translates to: FCRIDSTCASSG*IWIWRSDGQAW
Trigger: CCAGGCTTGCCCATCGGATCTCCAAATCCAAATTCAGCCGCTACTGGCGCAGGTGGAATCGATTCTGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS TCA 72 bp GGTGAACGTGGAGTCCACCAGCTTCTCATGGGACGGTaGCTCAGTGTCAGCTTGGTTGTTCCCTGTCTTGTT +
Preference number: 6 (lower is better)
Translates to: GERGVHQLLMGR*LSVSLVVPCLV
Trigger: AACAAGACAGGGAACAACCAAGCTGACACTGAGTCACCGTCCCATGAGAAGCTGGTGGACTCCACGTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 72 bp AACTCAAACCAGAAGAACAAGAGTATCCCAAGGCACTaGAGCGTCCTCATGGTGTCGGAAGCTGAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: NSNQKNKSIPRH*SVLMVSEAEGQ
Trigger: CTGGCCCTCAGCTTCCGACACCATGAGGACGCTGCAGTGCCTTGGGATACTCTTGTTCTTCTGGTTTGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239204.2
CDS CCA 72 bp CGGGAGTTCTCCTCTGCACTCATAGAGGGAGAGCATTaGGTATGTTCAGCTGGGTGTACCTCGGTGATTGCT +
Preference number: 6 (lower is better)
Translates to: REFSSALIEGEH*VCSAGCTSVIA
Trigger: AGCAATCACCGAGGTACACCCAGCTGAACATACCCAATGCTCTCCCTCTATGAGTGCAGAGGAGAACTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000112790.9
ENSMUST00000185345.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
CDS CCA 72 bp GCTAGAGGGGGAGCCACAGAAGCTGGAAATGTGGTCTaGAGGGTTGTTCTTACCATAGAGGGAGAGCATTGG +
Preference number: 6 (lower is better)
Translates to: ARGGATEAGNVV*RVVLTIEGEHW
Trigger: CCAATGCTCTCCCTCTATGGTAAGAACAACCCTCCAGACCACATTTCCAGCTTCTGTGGCTCCCCCTCTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112793.10
ENSMUST00000220022.2
CDS TCA 72 bp CCAGGAGGGCTTTATTGGCTGTGTCTTGCACTTCTGTaGGCCAGTGAGGCTGGTTGTAATGTTCGGAGGCAA +
Preference number: 6 (lower is better)
Translates to: PGGLYWLCLALL*ASEAGCNVRRQ
Trigger: TTGCCTCCGAACATTACAACCAGCCTCACTGGCTCACAGAAGTGCAAGACACAGCCAATAAAGCCCTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 72 bp GCCTGTCTCCAAAGCACAAGGGGAAGGATCCTCTTCTaGCGGAACATCTATTATGCCCTCCTGGTTGTAGCA +
Preference number: 6 (lower is better)
Translates to: ACLQSTRGRILF*RNIYYALLVVA
Trigger: TGCTACAACCAGGAGGGCATAATAGATGTTCCGGCAGAAGAGGATCCTTCCCCTTGTGCTTTGGAGACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CAA 72 bp CTGAGGACTCGCAGCACTCGTAAAATCTTCACAACGTaGATCGCGCTGGACTGGATGCCAAAGGAGATGAGG +
Preference number: 6 (lower is better)
Translates to: LRTRSTRKIFTT*IALDWMPKEMR
Trigger: CCTCATCTCCTTTGGCATCCAGTCCAGCGCGATCAACGTTGTGAAGATTTTACGAGTGCTGCGAGTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CAA 72 bp GGTCTGGAGGGTTGTTCTTACCATAGAGGGAGAGCATaGGGTATGTTCAGCTGGGTGTACCTCGGTGATTGC +
Preference number: 6 (lower is better)
Translates to: GLEGCSYHRGRA*GMFSWVYLGDC
Trigger: GCAATCACCGAGGTACACCCAGCTGAACATACCCAATGCTCTCCCTCTATGGTAAGAACAACCCTCCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112793.10
ENSMUST00000220022.2
CDS CAA 90 bp CATTTCTGCAGTGAAAAGGGCCAGGAGGGCTTTATTGGCTGTGTCTaGCACTTCTGTGAGCCAGTGAGGCTGGTTGTAATGTTCGGAGGC +
Preference number: 6 (lower is better)
Translates to: HFCSEKGQEGFIGCV*HFCEPVRLVVMFGG
Trigger: GCCTCCGAACATTACAACCAGCCTCACTGGCTCACAGAAGTGCAAGACACAGCCAATAAAGCCCTCCTGGCCCTTTTCACTGCAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS TCA 72 bp AGCTCCTGGGTGGTGACCTCGATGAACTTGGGATCTTaGGCAAACTGTCCCAGTCCTTCTGAAATCAAGACC +
Preference number: 6 (lower is better)
Translates to: SSWVVTSMNLGS*ANCPSPSEIKT
Trigger: GGTCTTGATTTCAGAAGGACTGGGACAGTTTGCTCAAGATCCCAAGTTCATCGAGGTCACCACCCAGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 72 bp GACTGCGGGAAGTTATCGAACGTGCTCCTACGGGTCTaGATCTCATCGAAATTGAACTTCCCTCCAAAGAGC +
Preference number: 6 (lower is better)
Translates to: DCGKLSNVLLRV*ISSKLNFPPKS
Trigger: GCTCTTTGGAGGGAAGTTCAATTTCGATGAGATGCAGACCCGTAGGAGCACGTTCGATAACTTCCCGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 72 bp CACTGCAGTACTCGGCTTCTTCACTCATCCTTACGCTaGGGGTCTCATCTGGAAATATCTCCTGATTCACCG +
Preference number: 6 (lower is better)
Translates to: HCSTRLLHSSLR*GSHLEISPDSP
Trigger: CGGTGAATCAGGAGATATTTCCAGATGAGACCCGCAGCGTAAGGATGAGTGAAGAAGCCGAGTACTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 72 bp ATGAGGTTGGTGAAGATCGTGTCATTGACAATACGGTaGCACTGCAGGCGGAACCTGTTGTTTGGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: MRLVKIVSLTIR*HCRRNLLFGLK
Trigger: CTTCAGCCCAAACAACAGGTTCCGCCTGCAGTGCCACCGTATTGTCAATGACACGATCTTCACCAACCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 72 bp GTCTGGAGGGTTGTTCTTACCATAGAGGGAGAGCATTaGGTATGTTCAGCTGGGTGTACCTCGGTGATTGCT +
Preference number: 6 (lower is better)
Translates to: VWRVVLTIEGEH*VCSAGCTSVIA
Trigger: AGCAATCACCGAGGTACACCCAGCTGAACATACCCAATGCTCTCCCTCTATGGTAAGAACAACCCTCCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112793.10
ENSMUST00000220022.2
CDS CAA 72 bp TCGTTTTCACTGGGCTGGAGGTCATCCATGTTGATCTaGGTAGTGGGTGGGGATTCTCCATCGGCTGTAATG +
Preference number: 6 (lower is better)
Translates to: SFSLGWRSSMLI*VVGGDSPSAVM
Trigger: CATTACAGCCGATGGAGAATCCCCACCCACTACCAAGATCAACATGGATGACCTCCAGCCCAGTGAAAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 72 bp AAGGGGAAGGATCCTCTTCTGCCGGAACATCTATTATaGCCTCCTGGTTGTAGCAGGTCTTGTGCATCTTTC +
Preference number: 6 (lower is better)
Translates to: KGKDPLLPEHLL*PPGCSRSCASF
Trigger: GAAAGATGCACAAGACCTGCTACAACCAGGAGGGCATAATAGATGTTCCGGCAGAAGAGGATCCTTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 72 bp GATACTCCACTCGTTCCAGGTTGGAGTTGGTGGCGTTaGAGTCGTCTTCCGGAAAGGGAATATAGATTGCTA +
Preference number: 6 (lower is better)
Translates to: DTPLVPGWSWWR*SRLPEREYRLL
Trigger: TAGCAATCTATATTCCCTTTCCGGAAGACGACTCCAACGCCACCAACTCCAACCTGGAACGAGTGGAGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
CDS CCA 72 bp CGGGAGTTCTCCTCTGCACTCATAGAGGGAGAGCATTaGGTATGTTCAGCTGGATTAGTCTCACTGAGAATG +
Preference number: 6 (lower is better)
Translates to: REFSSALIEGEH*VCSAGLVSLRM
Trigger: CATTCTCAGTGAGACTAATCCAGCTGAACATACCCAATGCTCTCCCTCTATGAGTGCAGAGGAGAACTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000188078.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS CAA 72 bp GCGGGAGTTCTCCTCTGCACTCATAGAGGGAGAGCATaGGGTATGTTCAGCTGGATTAGTCTCACTGAGAAT +
Preference number: 6 (lower is better)
Translates to: AGVLLCTHRGRA*GMFSWISLTEN
Trigger: ATTCTCAGTGAGACTAATCCAGCTGAACATACCCAATGCTCTCCCTCTATGAGTGCAGAGGAGAACTCCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000186889.7
ENSMUST00000187474.7
ENSMUST00000188078.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219833.2
CDS GCA 72 bp TTGGTGAAGATCGTGTCATTGACAATACGGTGGCACTaGAGGCGGAACCTGTTGTTTGGGCTGAAGATGAAA +
Preference number: 6 (lower is better)
Translates to: LVKIVSLTIRWH*RRNLLFGLKMK
Trigger: TTTCATCTTCAGCCCAAACAACAGGTTCCGCCTGCAGTGCCACCGTATTGTCAATGACACGATCTTCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CCA 72 bp TCACGTCGAATCCAGCTCCTTTCCCTCCTAGAGCATTaGCCCCATCAGCTTTGGTTGCTTGTTCTAAAATTG +
Preference number: 6 (lower is better)
Translates to: SRRIQLLSLLEH*PHQLWLLVLKL
Trigger: CAATTTTAGAACAAGCAACCAAAGCTGATGGGGCCAATGCTCTAGGAGGGAAAGGAGCTGGATTCGACGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS CAA 90 bp CTCAGTGCCTTCACGTCGAATCCAGCTCCTTTCCCTCCTAGAGCATaGGCCCCATCAGCTTTGGTTGCTTGTTCTAAAATTGCACTAAAA +
Preference number: 6 (lower is better)
Translates to: LSAFTSNPAPFPPRA*APSALVACSKIALK
Trigger: TTTTAGTGCAATTTTAGAACAAGCAACCAAAGCTGATGGGGCCAATGCTCTAGGAGGGAAAGGAGCTGGATTCGACGTGAAGGCACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 72 bp GAAGATCACGAGCCAGTAGAAGACGTTGGACTTAACTaGTGCACGGCATTTTCTTCTGCAGAATCGATTCCA +
Preference number: 6 (lower is better)
Translates to: EDHEPVEDVGLN*CTAFSSAESIP
Trigger: TGGAATCGATTCTGCAGAAGAAAATGCCGTGCAGCAGTTAAGTCCAACGTCTTCTACTGGCTCGTGATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000075591.13
ENSMUST00000078320.14
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000112825.9
ENSMUST00000185345.7
ENSMUST00000186889.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187474.7
ENSMUST00000187940.7
ENSMUST00000188078.7
ENSMUST00000188106.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000189520.7
ENSMUST00000190285.2
ENSMUST00000219018.2
ENSMUST00000219223.2
ENSMUST00000219833.2
ENSMUST00000220022.2
CDS GCA 72 bp GCATTGGGTATGTTCAGCTGGGTGTACCTCGGTGATTaGTATATCAACAATGCTACCCACAACAATCAAGGC +
Preference number: 6 (lower is better)
Translates to: ALGMFSWVYLGD*YINNATHNNQG
Trigger: GCCTTGATTGTTGTGGGTAGCATTGTTGATATAGCAATCACCGAGGTACACCCAGCTGAACATACCCAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000112790.9
ENSMUST00000112793.10
ENSMUST00000185345.7
ENSMUST00000187317.7
ENSMUST00000187386.7
ENSMUST00000187940.7
ENSMUST00000188522.7
ENSMUST00000188865.7
ENSMUST00000189389.7
ENSMUST00000220022.2