RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNA1A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034656

Ensembl transcript IDs: ENSMUST00000121390.8, ENSMUST00000122053.2, ENSMUST00000153691.2, ENSMUST00000215756.2, ENSMUST00000238337.2, ENSMUST00000238701.2

Found 1002 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 72 bp TGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTaGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCACC +
Preference number: 3 (lower is better)
Translates to: WPASTPVGLRSV*GVQPSFRLAAT
Trigger: GGTGGCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
3UTR-3UTR CAA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGGTTATTGTTTATCATTaGCAGTGCGCCCGCACTTTA +
Preference number: 3 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRVIVYH*QCARTL
Trigger: TAAAGTGCGGGCGCACTGCAAATGATAAACAATAAC...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
3UTR-3UTR CAA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTTATTGTTTATCATTaGCAGTGCGCCCGCACTTTA +
Preference number: 3 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRVIVYH*QCARTL
Trigger: TAAAGTGCGGGCGCACTGCAAATGATAAACAATAAC...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
3UTR-3UTR CAA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAGTTATTGTTTATCATTaGCAGTGCGCCCGCACTTTA +
Preference number: 3 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSVIVYH*QCARTL
Trigger: TAAAGTGCGGGCGCACTGCAAATGATAAACAATAAC...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCCGCGGGGACGTGGCCTaGGCTCTGGCCTGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACRGDVA*ALACRR
Trigger: CCGACGACAGGCCAGAGCGCAGGCCACGTCCCCGCG...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCGAGAGCGCTCAGAGGTaGGGTGGCCACGGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACESAQR*GGHGPG
Trigger: GCCGGGACCGTGGCCACCGCACCTCTGAGCGCTCTC...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGGAGAGCGCTCAGAGGTaGGGTGGCCACGGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRESAQR*GGHGPG
Trigger: GCCGGGACCGTGGCCACCGCACCTCTGAGCGCTCTC...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCGGGGGAAGGCCGCTGTaGCCCAGGCTGTCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACGGRPL*PRLSWG
Trigger: TCCCCACGACAGCCTGGGCCACAGCGGCCTTCCCCC...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGGCTCCCGACCTTCGCTaGGCGAGCGGGACCAGCGCT +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRAPDLR*ASGTSA
Trigger: AGCGCTGGTCCCGCTCGCCCAGCGAAGGTCGGGAGC...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTCGCGGGGACGTGGCCTaGGCTCTGGCCTGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRRGDVA*ALACRR
Trigger: CCGACGACAGGCCAGAGCGCAGGCCACGTCCCCGCG...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGAGAGCGCTCAGAGGTaGGGTGGCCACGGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAESAQR*GGHGPG
Trigger: GCCGGGACCGTGGCCACCGCACCTCTGAGCGCTCTC...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGGGGGAAGGCCGCTGTaGCCCAGGCTGTCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAGGRPL*PRLSWG
Trigger: TCCCCACGACAGCCTGGGCCACAGCGGCCTTCCCCC...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGCTCCCGACCTTCGCTaGGCGAGCGGGACCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVAPDLR*ASGTSA
Trigger: AGCGCTGGTCCCGCTCGCCCAGCGAAGGTCGGGAGC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTGCTTGTACATCCTCTaGGCTCCGGGCTGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRCLYIL*APGCPP
Trigger: GGGCGGGCAGCCCGGAGCGCAGAGGATGTACAAGCA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCGGGGTTGGACGGGTTaGCCGGATTGTTGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSRGWTG*PDCWAS
Trigger: GGACGCCCAACAATCCGGGCAACCCGTCCAACCCCG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCACAGCGCCTCGCGGCTaGCCAGCAGGTTCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSTAPRG*PAGSAC
Trigger: GCAAGCAGAACCTGCTGGCCAGCCGCGAGGCGCTGT...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGACAGCGCCTCGCGGCTaGCCAGCAGGTTCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRTAPRG*PAGSAC
Trigger: GCAAGCAGAACCTGCTGGCCAGCCGCGAGGCGCTGT...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCATGGCCCAGGCTGTCGTaGGGACTGGCAGGTTCCCCG +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAWPRLS*GLAGSP
Trigger: CGGGGAACCTGCCAGTCCCCACGACAGCCTGGGCCA...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTGGCCCAGGCTGTCGTaGGGACTGGCAGGTTCCCCG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVWPRLS*GLAGSP
Trigger: CGGGGAACCTGCCAGTCCCCACGACAGCCTGGGCCA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCATCTCTTGGGCCCGCTaGGTCACCCAGGACGGGCTC +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSISWAR*VTQDGL
Trigger: GAGCCCGTCCTGGGTGACCCAGCGGGCCCAAGAGAT...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCGGGTGGCCCTCGCTCTaGGCTCCAGGTGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACGWPSL*APGASL
Trigger: AAGACTGGCACCTGGAGCCCAGAGCGAGGGCCACCC...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCGGCCCCTTCTCCTCTaGTTCTCTGCTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSRPLLL*FSAGRR
Trigger: CCGCCTCCCAGCAGAGAACCAGAGGAGAAGGGGCCG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCCAGTCGCCGGGCTTTaGGTCCCAGCACAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRPVAGL*VPAQRL
Trigger: CAGCCTCTGTGCTGGGACCCAAAGCCCGGCGACTGG...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCCGCGTAGTAACCATTaGGCAGCCTGCGGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSPRSNH*AACGRG
Trigger: GCCACGGCCGCAGGCTGCCCAATGGTTACTACGCGG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAAGGACGGGAGGGAGCTaGGGCTGTTCGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRARTGGS*GCSAAG
Trigger: CCCTGCAGCCGAACAGCCCCAGCTCCCTCCCGTCCT...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238337.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCCTTGGCGAGCGGGAATaGGGAGGACGGGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACLGERE*GGREGA
Trigger: AGCTCCCTCCCGTCCTCCCCATTCCCGCTCGCCAAG...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238337.2
CDS-3UTR TCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCCCTCCTGGGTCCAGCTaGGTGGAGGGAAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACPPGSS*VEGRAF
Trigger: GAATGCCCTTCCCTCCACTCAGCTGGACCCAGGAGG...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCGGGCTGGGCTTCCACTaGCGGAACTACTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSGLGFH*RNYCPV
Trigger: GACAGGGCAGTAGTTCCGTCAGTGGAAGCCCAGCCC...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCGGGCTGGGCTTCCACTaGCGGAACTACTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACGLGFH*RNYCPV
Trigger: GACAGGGCAGTAGTTCCGTCAGTGGAAGCCCAGCCC...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCGGGGTTGGACGGGTTaGCCGGATTGTTGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVRGWTG*PDCWAS
Trigger: GGACGCCCAACAATCCGGGCAACCCGTCCAACCCCG...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCACATTGTTGCGGGGTaGGTTGGGCTGCACCGGGTC +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRHIVAG*VGLHRV
Trigger: GACCCGGTGCAGCCCAACGCACCCCGCAACAATGTG...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCGACATTTGGTCCCGTTaGGGCAGGTGCGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACDIWSR*GRCGQA
Trigger: AGCCTGCCCGCACCTGCCCCAACGGGACCAAATGTC...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGACAGCGCCTCGCGGCTaGCCAGCAGGTTCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVTAPRG*PAGSAC
Trigger: GCAAGCAGAACCTGCTGGCCAGCCGCGAGGCGCTGT...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCGGCCCAGGTCCTGCTaGATTGGCCTGGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVRPRSC*IGLVVD
Trigger: GTCCACCACCAGGCCAATCCAGCAGGACCTGGGCCG...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGGCCAGCGGCAGGTCCTaGCGGCCCAGGTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLASGRS*RPRSCW
Trigger: CCAGCAGGACCTGGGCCGCCAGGACCTGCCGCTGGC...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCAGCGTTCTGGGGATTaGTGGCCAAGGCGGGACCAG +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRQRSGD*WPRRDQ
Trigger: CTGGTCCCGCCTTGGCCACCAATCCCCAGAACGCTG...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCATCAGGCCTCCTCCTaGGTCCAGCTGAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSHQASS*VQLSGG
Trigger: CCCTCCACTCAGCTGGACCCAGGAGGAGGCCTGATG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAATCTCTTGGGCCCGCTaGGTCACCCAGGACGGGCTC +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAISWAR*VTQDGL
Trigger: GAGCCCGTCCTGGGTGACCCAGCGGGCCCAAGAGAT...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGGGTGGCCCTCGCTCTaGGCTCCAGGTGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAGWPSL*APGASL
Trigger: AAGACTGGCACCTGGAGCCCAGAGCGAGGGCCACCC...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGAGGCATGTCGATGGGTaGCCCTCGCTCTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRRHVDG*PSLWAP
Trigger: TGGAGCCCAGAGCGAGGGCCACCCATCGACATGCCT...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCGGCCCCTTCTCCTCTaGTTCTCTGCTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVRPLLL*FSAGRR
Trigger: CCGCCTCCCAGCAGAGAACCAGAGGAGAAGGGGCCG...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCCAGTCGCCGGGCTTTaGGTCCCAGCACAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVPVAGL*VPAQRL
Trigger: CAGCCTCTGTGCTGGGACCCAAAGCCCGGCGACTGG...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTGGTGGTGGTGGTGGTaGTGTGGCCGATGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRWWWWW*CGRCFR
Trigger: CCGGAAGCATCGGCCACACCACCACCACCACCACCA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCTGGTGGTGGTGGTGGTaGTGTGGCCGATGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSWWWWW*CGRCFR
Trigger: CCGGAAGCATCGGCCACACCACCACCACCACCACCA...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCACCTGGCAGTCTTCGCTaGGTTGGGCTGGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAPGSLR*VGLGAA
Trigger: AGCAGCACCCAGCCCAACTCAGCGAAGACTGCCAGG...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCATCCACTGAGTGCTTaGGGACCTGTGGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSHPLSA*GPVASP
Trigger: AGGGCTGGCCACAGGTCCTCAAGCACTCAGTGGATG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCCATCCACTGAGTGCTTaGGGACCTGTGGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACHPLSA*GPVASP
Trigger: AGGGCTGGCCACAGGTCCTCAAGCACTCAGTGGATG...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCACCTCCTGGGTCCAGCTaGGTGGAGGGAAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAPPGSS*VEGRAF
Trigger: GAATGCCCTTCCCTCCACTCAGCTGGACCCAGGAGG...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGGAGGAGGCCGATCTaGAGCAGAGGGATCATCGCC +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACRRRPI*SRGIIA
Trigger: GGCGATGATCCCTCTGCTGCAGATCGGCCTCCTCCT...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCCCAGCAGGTTCTGCTTaGGCATCTCGCTGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACPAGSA*ASRWCA
Trigger: AGCGCACCAGCGAGATGCGCAAGCAGAACCTGCTGG...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCGCGGGGACGTGGCCTaGGCTCTGGCCTGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSRGDVA*ALACRR
Trigger: CCGACGACAGGCCAGAGCGCAGGCCACGTCCCCGCG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGATTGTTGGGCGTCCTaGGGCTGGCAGCGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVDCWAS*GWQRSG
Trigger: CCCAGAACGCTGCCAGCCGCAGGACGCCCAACAATC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGATTGTTGGGCGTCCTaGGGCTGGCAGCGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRADCWAS*GWQRSG
Trigger: CCCAGAACGCTGCCAGCCGCAGGACGCCCAACAATC...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGGAGAGCGCTCAGAGGTaGGGTGGCCACGGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEESAQR*GGHGPG
Trigger: GCCGGGACCGTGGCCACCGCACCTCTGAGCGCTCTC...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCTCTGGCGGACAGGGATaGGGTTGTAGAGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACSGGQG*GCRGPW
Trigger: CCATGGCCCTCTACAACCCCATCCCTGTCCGCCAGA...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCTGTCCCACACGGAGCTaGCGACTCACCCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACCPTRS*RLTLDV
Trigger: GACATCCAGGGTGAGTCGCCAGCTCCGTGTGGGACA...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGGGGACCCCAGAGCCCTaGTTCTCTTTTCTGCGTCGG +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRGTPEP*FSFLRR
Trigger: CCGACGCAGAAAAGAGAACCAGGGCTCTGGGGTCCC...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCGGGACCCCAGAGCCCTaGTTCTCTTTTCTGCGTCGG +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSGTPEP*FSFLRR
Trigger: CCGACGCAGAAAAGAGAACCAGGGCTCTGGGGTCCC...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTCGGCCCAGGTCCTGCTaGATTGGCCTGGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRRPRSC*IGLVVD
Trigger: GTCCACCACCAGGCCAATCCAGCAGGACCTGGGCCG...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGCCAGCGGCAGGTCCTaGCGGCCCAGGTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSASGRS*RPRSCW
Trigger: CCAGCAGGACCTGGGCCGCCAGGACCTGCCGCTGGC...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGGGGGGAAGGCCGCTGTaGCCCAGGCTGTCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLGGRPL*PRLSWG
Trigger: TCCCCACGACAGCCTGGGCCACAGCGGCCTTCCCCC...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGACTTGGACCACGGTGTaGTTGAGGGGCGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVTWTTV*LRGGQA
Trigger: AGCCTGCCCGCCCCTCAACCACACCGTGGTCCAAGT...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTATCTCTTGGGCCCGCTaGGTCACCCAGGACGGGCTC +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRISWAR*VTQDGL
Trigger: GAGCCCGTCCTGGGTGACCCAGCGGGCCCAAGAGAT...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCTGGGAGGCGGGGCATaGAGGCGGCCCTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSLGGGA*RRPWSG
Trigger: GCCAGACCAGGGCCGCCTCCATGCCCCGCCTCCCAG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCGAGGTCATTTCCACGTaGCCGGCCCCTTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACEVIST*PAPSPL
Trigger: CAGAGGAGAAGGGGCCGGCCACGTGGAAATGACCTC...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCGTGGTGGTGGTGGTGTaGCCGATGCTTCCGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSVVVVV*PMLPVL
Trigger: AAGGACCGGAAGCATCGGCCACACCACCACCACCAC...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGGCTCCCGACCTTCGCTaGGCGAGCGGGACCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLAPDLR*ASGTSA
Trigger: AGCGCTGGTCCCGCTCGCCCAGCGAAGGTCGGGAGC...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCACCTTCCCAGTACGGCTaGCATTTGGTCCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAPSQYG*HLVPLG
Trigger: CCCCAACGGGACCAAATGTCAGCCGTACTGGGAAGG...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCCTTCCCAGTACGGCTaGCATTTGGTCCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVPSQYG*HLVPLG
Trigger: CCCCAACGGGACCAAATGTCAGCCGTACTGGGAAGG...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCCAGCTTGGCACTTTTaGTGCTGGCTCTGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSPAWHF*CWLWRR
Trigger: CCTTCGCCAGAGCCAGCATCAAAAGTGCCAAGCTGG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCTGGTGGTGGAGAGGATaGACATGGAGCTGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACWWWRG*TWSCRA
Trigger: CGCCCTACAGCTCCATGTTCATCCTCTCCACCACCA...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCACATCCACTGAGTGCTTaGGGACCTGTGGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAHPLSA*GPVASP
Trigger: AGGGCTGGCCACAGGTCCTCAAGCACTCAGTGGATG...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCCCATGCGCTGGAACATaGGTGGTGTCCGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACPCAGT*VVSGSA
Trigger: AGCAGAACCGGACACCACTCATGTTCCAGCGCATGG...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGGCTGGGCTTCCACTaGCGGAACTACTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRGLGFH*RNYCPV
Trigger: GACAGGGCAGTAGTTCCGTCAGTGGAAGCCCAGCCC...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCATGGCCACCGAACAGCTaGATCCCCAGGAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAWPPNS*IPRRAK
Trigger: CTTTGCCCTCCTGGGGATGCAGCTGTTCGGTGGCCA...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTGGCCACCGAACAGCTaGATCCCCAGGAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVWPPNS*IPRRAK
Trigger: CTTTGCCCTCCTGGGGATGCAGCTGTTCGGTGGCCA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCATCTCGCTGGTGCGCTaGTCCCACACCGACTTGGTA +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACISLVR*SHTDLV
Trigger: TACCAAGTCGGTGTGGGAGCAGCGCACCAGCGAGAT...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCTTGTTACGGTTCTCCTaGGGGTCCACCACAAGCGGC +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSLLRFS*GSTTSG
Trigger: GCCGCTTGTGGTGGACCCGCAGGAGAACCGTAACAA...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCATCGCAGCACATTGTTaGGGGGTGCGTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSIAAHC*GVRWAA
Trigger: TGCAGCCCAACGCACCCCGCAACAATGTGCTGCGAT...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCTTGTTCTGGGGCATGTaGCTGGTCAGCGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSLFWGM*LVSGLA
Trigger: TGCCAAGCCGCTGACCAGGCACATGCCCCAGAACAA...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCACGGGCTCTCCTTCATaGCGCCTTCGTGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACTGSPS*RLREPS
Trigger: TGATGGCTCACGAAGGCGGCATGAAGGAGAGCCCGT...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCATCTCCTCTGGTTCTCTaGTGGGAGGCGGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRASPLVL*WEAGHG
Trigger: TCCATGCCCCGCCTCCCAGCAGAGAACCAGAGGAGA...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGAGTACGGCTGACATTTaGTCCCGTTGGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRSTADI*SRWGRC
Trigger: GCACCTGCCCCAACGGGACCAAATGTCAGCCGTACT...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCCTGCTGGATTGGCCTaGTGGTGGACAAGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRPAGLA*WWTSWD
Trigger: GTCCCAACTTGTCCACCACCAGGCCAATCCAGCAGG...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGTGCTTGAGGACCTGTaGCCAGCCCTCTCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAVLEDL*PALSCG
Trigger: TCCACAGGAGAGGGCTGGCCACAGGTCCTCAAGCAC...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGGAAGGGCATTCTGGCTaGGTCCTCCCTCCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFREGHSG*VLPPVL
Trigger: CAACACAGGAGGGAGGACCCAGCCAGAATGCCCTTC...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTCATCAGGCCTCCTCCTaGGTCCAGCTGAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRHQASS*VQLSGG
Trigger: CCCTCCACTCAGCTGGACCCAGGAGGAGGCCTGATG...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTTCTGGAACATCTCTTaGGCCCGCTGGGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRFWNIS*ARWVTQ
Trigger: CTGGGTGACCCAGCGGGCCCAAGAGATGTTCCAGAA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCTTCTGGAACATCTCTTaGGCCCGCTGGGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACFWNIS*ARWVTQ
Trigger: CTGGGTGACCCAGCGGGCCCAAGAGATGTTCCAGAA...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCTTCTGGAACATCTCTTaGGCCCGCTGGGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSFWNIS*ARWVTQ
Trigger: CTGGGTGACCCAGCGGGCCCAAGAGATGTTCCAGAA...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGAGGTCATTTCCACGTaGCCGGCCCCTTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAEVIST*PAPSPL
Trigger: CAGAGGAGAAGGGGCCGGCCACGTGGAAATGACCTC...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTTGGTGGTGGTGGTGGTaGTGTGGCCGATGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRWWWWW*CGRCFR
Trigger: CCGGAAGCATCGGCCACACCACCACCACCACCACCA...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGGACATGCAGAGTCCTaGATGAGCCTGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVGHAES*MSLPGC
Trigger: GCACCCTGGCAGGCTCATCCAGGACTCTGCATGTCC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCATGGTGGTGGAGAGGATaGACATGGAGCTGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAWWWRG*TWSCRA
Trigger: CGCCCTACAGCTCCATGTTCATCCTCTCCACCACCA...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCTCCGGAAGAGAAGCATaGGCGCTTGGAAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSSGREA*ALGRRS
Trigger: GGACCTTCTTCCAAGCGCTCATGCTTCTCTTCCGGA...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCTGGACTTGTGAGGTGTaGCCAGCAGATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACWTCEV*PADPGS
Trigger: AGACCCTGGATCTGCTGGTCACACCTCACAAGTCCA...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCACCATGCGCTGGAACATaGGTGGTGTCCGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAPCAGT*VVSGSA
Trigger: AGCAGAACCGGACACCACTCATGTTCCAGCGCATGG...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTTTCATGCCGCCTTCGTaGGCCATCAGGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRFMPPS*AIRPPP
Trigger: AGGAGGAGGCCTGATGGCTCACGAAGGCGGCATGAA...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGGCTCCATCAAAAGGGTaGCTCTGCTCCACGTCTGTC +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRAPSKG*LCSTSV
Trigger: GACAGACGTGGAGCAGAGGCACCCTTTTGATGGAGC...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTTGGCCACCGAACAGCTaGATCCCCAGGAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRWPPNS*IPRRAK
Trigger: CTTTGCCCTCCTGGGGATGCAGCTGTTCGGTGGCCA...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGTGGCGGCCCAGGTCCTaGTGGATTGGCCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEWRPRS*WIGLVV
Trigger: CACCACCAGGCCAATCCAGCAGGACCTGGGCCGCCA...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGTCCTCCCCGGGGTCTaGCTCCTCTTCCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVVLPGV*LLFLFL
Trigger: AAGAAAGAGGAAGAGGAGGCAGACCCCGGGGAGGAC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCTTGCCCTTGAAGAGCTaGACGGCTACCACAGCGAAG +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSLPLKS*TATTAK
Trigger: CTTCGCTGTGGTAGCCGTGCAGCTCTTCAAGGGCAA...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCCTTGGACTCGTCCGTaGAGTGGAAGAACTTGCCCT +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSPWTRP*SGRTCP
Trigger: AGGGCAAGTTCTTCCACTGCACGGACGAGTCCAAGG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCGAGAGCATGATGTTGTaGCACGCTTCTCCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSESMML*HASPVA
Trigger: CGCCACAGGAGAAGCGTGGCACAACATCATGCTCTC...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCTGTCCTTATAGTGAATaGGGCCGCAGGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACCPYSE*GRRQQG
Trigger: ACCCTGCTGCCTGCGGCCGCATTCACTATAAGGACA...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTGTCCTTATAGTGAATaGGGCCGCAGGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRCPYSE*GRRQQG
Trigger: ACCCTGCTGCCTGCGGCCGCATTCACTATAAGGACA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGCTGGGGCTGTTCGGCTaGAGGGTGAGTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSELGLFG*RVSPRC
Trigger: GCAGCGAGGACTCACCCTGCAGCCGAACAGCCCCAG...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238337.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAAGTACGGCTGACATTTaGTCCCGTTGGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRASTADI*SRWGRC
Trigger: GCACCTGCCCCAACGGGACCAAATGTCAGCCGTACT...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGAGTACGGCTGACATTTaGTCCCGTTGGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVSTADI*SRWGRC
Trigger: GCACCTGCCCCAACGGGACCAAATGTCAGCCGTACT...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCGGATTGGCCTGGTGGTaGACAAGTTGGGACCAGACA +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACGLAWW*TSWDQT
Trigger: TGTCTGGTCCCAACTTGTCCACCACCAGGCCAATCC...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGCTGGATTGGCCTGGTaGTGGACAAGTTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVAGLAW*WTSWDQ
Trigger: CTGGTCCCAACTTGTCCACCACCAGGCCAATCCAGC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCTGGATTGGCCTGGTaGTGGACAAGTTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAAGLAW*WTSWDQ
Trigger: CTGGTCCCAACTTGTCCACCACCAGGCCAATCCAGC...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGTGGGCGTCCTGCGGCTaGCAGCGTTCTGGGGATTGG +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLWASCG*QRSGDW
Trigger: CCAATCCCCAGAACGCTGCCAGCCGCAGGACGCCCA...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTGTGCTCGGGTTTCCTaGCAGTCTTCGCTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRCARVS*QSSLSW
Trigger: CCAACTCAGCGAAGACTGCCAGGAAACCCGAGCACA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCGGTGTACTCAAAGGGTaGGGACACGACGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACGVLKG*GHDELP
Trigger: TGGCAGTTCGTCGTGTCCCCACCCTTTGAGTACACC...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCGCTGGAACATGAGTaGTGTCCGGTTCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAALEHE*CPVLLL
Trigger: GAGGAGCAGAACCGGACACCACTCATGTTCCAGCGC...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGCGCTGGAACATGAGTaGTGTCCGGTTCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVALEHE*CPVLLL
Trigger: GAGGAGCAGAACCGGACACCACTCATGTTCCAGCGC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGAAGGGCATTCTGGCTaGGTCCTCCCTCCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVEGHSG*VLPPVL
Trigger: CAACACAGGAGGGAGGACCCAGCCAGAATGCCCTTC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCGCATCTCCACAGACTaGGAGTTGGGCTGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSRISTD*ELGWLL
Trigger: TAACAGCCAGCCCAACTCCCAGTCTGTGGAGATGCG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCTGGTCTGGCCTTCCATaGGGAGGTAGTGTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACWSGLP*GGSVRC
Trigger: ACAGCGAACACTACCTCCCCATGGAAGGCCAGACCA...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTGGTCTGGCCTTCCATaGGGAGGTAGTGTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRWSGLP*GGSVRC
Trigger: ACAGCGAACACTACCTCCCCATGGAAGGCCAGACCA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCGGCCCCTTCTCCTCTaGTTCTCTGCTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLRPLLL*FSAGRR
Trigger: CCGCCTCCCAGCAGAGAACCAGAGGAGAAGGGGCCG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGCGGCCCCTTCTCCTCTaGTTCTCTGCTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSERPLLL*FSAGRR
Trigger: CCGCCTCCCAGCAGAGAACCAGAGGAGAAGGGGCCG...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGAGGCTGAGCGCTTCATaGGGCTGGTATCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRRLSAS*GWYQRW
Trigger: CCATCTCTGATACCAGCCCCATGAAGCGCTCAGCCT...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCCAGTCGCCGGGCTTTaGGTCCCAGCACAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLPVAGL*VPAQRL
Trigger: CAGCCTCTGTGCTGGGACCCAAAGCCCGGCGACTGG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCGGTCACCCGATTGGGTaGTCATGCTCAGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACGHPIG*SCSDLS
Trigger: GGACAGATCTGAGCATGACCACCCAATCGGGTGACC...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGGGCAGGTCACCCGATTaGGTGGTCATGCTCAGATCT +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRGRSPD*VVMLRS
Trigger: AGATCTGAGCATGACCACCCAATCGGGTGACCTGCC...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCATTTTGTGCGCCTGGTaGGCCAAGATGACATCCCGG +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACILCAW*AKMTSR
Trigger: CCGGGATGTCATCTTGGCCCACCAGGCGCACAAAAT...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCCACGACAAAGTCCATaGCGTTCCAGCCATTCCTCA +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSPRQSP*RSSHSS
Trigger: TGAGGAATGGCTGGAACGTCATGGACTTTGTCGTGG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTGTTGTCGAACTGAGTaGTGCCGTTGTTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRCCRTE*CRCWAL
Trigger: AAGGGCCCAACAACGGCATCACTCAGTTCGACAACA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGGATGTTGTCGAACTaGGTGATGCCGTTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACRMLSN*VMPLLG
Trigger: GCCCAACAACGGCATCACTCAGTTCGACAACATCCT...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCAGAAGGCCTGAGTTTTaGCCATGCGGCGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSRRPEF*PCGGCR
Trigger: TCTACATCCGCCGCATGGTCAAAACTCAGGCCTTCT...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGGCTTTGGCAGCCGCTTaGTGGTCTTTAGAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRALAAA*WSLEVV
Trigger: TACGACCTCTAAAGACCATCAAGCGGCTGCCAAAGC...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGATCCAGGGTCTTCTaGGACAGGTTGGGCCAAATG +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACRSRVF*DRLGQM
Trigger: CATTTGGCCCAACCTGTCTCAGAAGACCCTGGATCT...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCAGATCCAGGGTCTTCTaGGACAGGTTGGGCCAAATG +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSRSRVF*DRLGQM
Trigger: CATTTGGCCCAACCTGTCTCAGAAGACCCTGGATCT...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTGGACTTGTGAGGTGTaGCCAGCAGATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVWTCEV*PADPGS
Trigger: AGACCCTGGATCTGCTGGTCACACCTCACAAGTCCA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCGGGGTTGGACGGGTTaGCCGGATTGTTGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSRGWTG*PDCWAS
Trigger: GGACGCCCAACAATCCGGGCAACCCGTCCAACCCCG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTATCTCCACCGCCATGTaGTCGGGTTTCCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRISTAM*SGFLAV
Trigger: GACTGCCAGGAAACCCGAGCACATGGCGGTGGAGAT...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTCCTCCCCGGGGTCTaGCTCCTCTTCCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRVLPGV*LLFLFL
Trigger: AAGAAAGAGGAAGAGGAGGCAGACCCCGGGGAGGAC...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCACATTGTTGCGGGGTaGGTTGGGCTGCACCGGGTC +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLHIVAG*VGLHRV
Trigger: GACCCGGTGCAGCCCAACGCACCCCGCAACAATGTG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTATCGCAGCACATTGTTaGGGGGTGCGTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRIAAHC*GVRWAA
Trigger: TGCAGCCCAACGCACCCCGCAACAATGTGCTGCGAT...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTTGCCCTTGAAGAGCTaGACGGCTACCACAGCGAAG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVLPLKS*TATTAK
Trigger: CTTCGCTGTGGTAGCCGTGCAGCTCTTCAAGGGCAA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCACCTTGGACTCGTCCGTaGAGTGGAAGAACTTGCCCT +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAPWTRP*SGRTCP
Trigger: AGGGCAAGTTCTTCCACTGCACGGACGAGTCCAAGG...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGTAGCATCCACTGAGTaGTTGAGGACCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVVASTE*LRTCGQ
Trigger: CTGGCCACAGGTCCTCAAGCACTCAGTGGATGCTAC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGTAGCATCCACTGAGTaGTTGAGGACCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAVASTE*LRTCGQ
Trigger: CTGGCCACAGGTCCTCAAGCACTCAGTGGATGCTAC...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCCGATACTGGAAGCTCTaGTTGTTCTGGGGCATGTGC +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACRYWKL*LFWGMC
Trigger: GCACATGCCCCAGAACAAGCAGAGCTTCCAGTATCG...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCGATACTGGAAGCTCTaGTTGTTCTGGGGCATGTGC +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSRYWKL*LFWGMC
Trigger: GCACATGCCCCAGAACAAGCAGAGCTTCCAGTATCG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGAAGTCCAGAGGAGAATaGGGATGGTGTAACCCTGGC +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRKSRGE*GWCNPG
Trigger: GCCAGGGTTACACCATCCGCATTCTCCTCTGGACTT...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCAAGTCCAGAGGAGAATaGGGATGGTGTAACCCTGGC +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSKSRGE*GWCNPG
Trigger: GCCAGGGTTACACCATCCGCATTCTCCTCTGGACTT...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGGGCCTTGAAGGACTaGACGAAAGTCCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACRALKD*TKVQRR
Trigger: TCTCCTCTGGACTTTCGTGCAGTCCTTCAAGGCCCT...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGAGAGCATGATGTTGTaGCACGCTTCTCCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVESMML*HASPVA
Trigger: CGCCACAGGAGAAGCGTGGCACAACATCATGCTCTC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGAGAGCATGATGTTGTaGCACGCTTCTCCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAESMML*HASPVA
Trigger: CGCCACAGGAGAAGCGTGGCACAACATCATGCTCTC...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTCTGCATCCATCTGCTaGTTGTCAGCTCCACCCTTG +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRSASIC*LSAPPL
Trigger: CAAGGGTGGAGCTGACAAGCAGCAGATGGATGCAGA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCTCTGCATCCATCTGCTaGTTGTCAGCTCCACCCTTG +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSSASIC*LSAPPL
Trigger: CAAGGGTGGAGCTGACAAGCAGCAGATGGATGCAGA...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCTCTGCATCCATCTGCTaGTTGTCAGCTCCACCCTTG +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACSASIC*LSAPPL
Trigger: CAAGGGTGGAGCTGACAAGCAGCAGATGGATGCAGA...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTCCTCTCGCATGGCCTaGAGTTTCTTGGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVSSRMA*SFLALL
Trigger: GAGCAAGGCCAAGAAACTGCAGGCCATGCGAGAGGA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTACGGGCTCTCCTTCATaGCGCCTTCGTGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRTGSPS*RLREPS
Trigger: TGATGGCTCACGAAGGCGGCATGAAGGAGAGCCCGT...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCCCGATTGGGTGGTCATaGTCAGATCTGTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACPIGWS*SDLSPN
Trigger: GTTTGGGGACAGATCTGAGCATGACCACCCAATCGG...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGTGCTGTGCATTTTGTaGGCCTGGTGGGCCAAGATG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVVLCIL*AWWAKM
Trigger: CATCTTGGCCCACCAGGCGCACAAAATGCACAGCAC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCGAAAAGTGTCGAAGTTaGTGGGCGGAGTCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACEKCRS*WAESPH
Trigger: ATGAGGGGACTCCGCCCACCAACTTCGACACTTTTC...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCTGGATTGGCCTGGTaGTGGACAAGTTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRAGLAW*WTSWDQ
Trigger: CTGGTCCCAACTTGTCCACCACCAGGCCAATCCAGC...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTCCTGCTGGATTGGCCTaGTGGTGGACAAGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRPAGLA*WWTSWD
Trigger: GTCCCAACTTGTCCACCACCAGGCCAATCCAGCAGG...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGGTCCTGCTGGATTaGCCTGGTGGTGGACAAGTT +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVQVLLD*PGGGQV
Trigger: AACTTGTCCACCACCAGGCCAATCCAGCAGGACCTG...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCGGCCCAGGTCCTGCTaGATTGGCCTGGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSRPRSC*IGLVVD
Trigger: GTCCACCACCAGGCCAATCCAGCAGGACCTGGGCCG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCAGCGTTCTGGGGATTaGTGGCCAAGGCGGGACCAG +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLQRSGD*WPRRDQ
Trigger: CTGGTCCCGCCTTGGCCACCAATCCCCAGAACGCTG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGACTTGGACCACGGTGTaGTTGAGGGGCGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLTWTTV*LRGGQA
Trigger: AGCCTGCCCGCCCCTCAACCACACCGTGGTCCAAGT...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCCTCTTCCTCTTTCTTTaGCAGTGGGTCTGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACLFLFL*QWVWVG
Trigger: GCCAACCCAGACCCACTGCCAAAGAAAGAGGAAGAG...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGGACTCGTCCGTGCAGTaGAAGAACTTGCCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRDSSVQ*KNLPLK
Trigger: CTTCAAGGGCAAGTTCTTCCACTGCACGGACGAGTC...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGGTGTACTCAAAGGGTaGGGACACGACGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAGVLKG*GHDELP
Trigger: TGGCAGTTCGTCGTGTCCCCACCCTTTGAGTACACC...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTGGCCTGCAGTTTCTTaGCCTTGCTCTGCCGGTAAT +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRWPAVS*PCSAGN
Trigger: ATTACCGGCAGAGCAAGGCCAAGAAACTGCAGGCCA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCATCAGGCCTCCTCCTaGGTCCAGCTGAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLHQASS*VQLSGG
Trigger: CCCTCCACTCAGCTGGACCCAGGAGGAGGCCTGATG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTTTCTGGAACATCTCTTaGGCCCGCTGGGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRFWNIS*ARWVTQ
Trigger: CTGGGTGACCCAGCGGGCCCAAGAGATGTTCCAGAA...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTCAGGTGCCAGTCTTCTaGAACATCTCTTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRQVPVF*NISWAR
Trigger: GCGGGCCCAAGAGATGTTCCAGAAGACTGGCACCTG...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGGGTGGCCCTCGCTCTaGGCTCCAGGTGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSGWPSL*APGASL
Trigger: AAGACTGGCACCTGGAGCCCAGAGCGAGGGCCACCC...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCGCATCTCCACAGACTaGGAGTTGGGCTGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVRISTD*ELGWLL
Trigger: TAACAGCCAGCCCAACTCCCAGTCTGTGGAGATGCG...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTGTTGTCGAACTGAGTaGTGCCGTTGTTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVCCRTE*CRCWAL
Trigger: AAGGGCCCAACAACGGCATCACTCAGTTCGACAACA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCAAAAGTAGCATCCACTaGGTGCTTGAGGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSKSSIH*VLEDLW
Trigger: CCACAGGTCCTCAAGCACTCAGTGGATGCTACTTTT...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCACATAAGGTAGGGCCTTaGAGGACTGCACGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAHKVGP*RTARKS
Trigger: GGACTTTCGTGCAGTCCTTCAAGGCCCTACCTTATG...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCATAAGGTAGGGCCTTaGAGGACTGCACGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVHKVGP*RTARKS
Trigger: GGACTTTCGTGCAGTCCTTCAAGGCCCTACCTTATG...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTTCCGGAAGAGAAGCATaGGCGCTTGGAAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRSGREA*ALGRRS
Trigger: GGACCTTCTTCCAAGCGCTCATGCTTCTCTTCCGGA...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCCACCCTTGGCAATTTTaGTATCAAGGGCGGTTCGGA +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACHPWQF*YQGRFG
Trigger: TCCGAACCGCCCTTGATATCAAAATTGCCAAGGGTG...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTTGGACTTGTGAGGTGTaGCCAGCAGATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRWTCEV*PADPGS
Trigger: AGACCCTGGATCTGCTGGTCACACCTCACAAGTCCA...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCCTCCTGGGTCCAGCTaGGTGGAGGGAAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSPPGSS*VEGRAF
Trigger: GAATGCCCTTCCCTCCACTCAGCTGGACCCAGGAGG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGTTCATGCCGCCTTCGTaGGCCATCAGGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLFMPPS*AIRPPP
Trigger: AGGAGGAGGCCTGATGGCTCACGAAGGCGGCATGAA...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGTTCATGCCGCCTTCGTaGGCCATCAGGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEFMPPS*AIRPPP
Trigger: AGGAGGAGGCCTGATGGCTCACGAAGGCGGCATGAA...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGGTAGTGTTCGCTGTCTaGGTAGCCATCAGTACCCAT +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRVVFAV*VAISTH
Trigger: ATGGGTACTGATGGCTACTCAGACAGCGAACACTAC...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTGTTGCCAAACACCTTaGAGGACTGCACGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRCCQTP*RTARKS
Trigger: GGACTTTCGTGCAGTCCTTCAAGGTGTTTGGCAACA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238337.2
CDS-3UTR GCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGGAGGAGGCCGATCTaGAGCAGAGGGATCATCGCC +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLRRRPI*SRGIIA
Trigger: GGCGATGATCCCTCTGCTGCAGATCGGCCTCCTCCT...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCTATGGACATGTTGGCTaGAGACAGGGGACTCACTTC +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSYGHVG*RQGTHF
Trigger: GAAGTGAGTCCCCTGTCTGCAGCCAACATGTCCATA...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTATGGACATGTTGGCTaGAGACAGGGGACTCACTTC +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRYGHVG*RQGTHF
Trigger: GAAGTGAGTCCCCTGTCTGCAGCCAACATGTCCATA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGCGCGGGGACGTGGCCTaGGCTCTGGCCTGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRRGDVA*ALACRR
Trigger: CCGACGACAGGCCAGAGCGCAGGCCACGTCCCCGCG...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGATTGTTGGGCGTCCTaGGGCTGGCAGCGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSDCWAS*GWQRSG
Trigger: CCCAGAACGCTGCCAGCCGCAGGACGCCCAACAATC...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGAGCAGGGTCATACTCTaGCCAGACACGCACGTATTC +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVSRVIL*PDTHVF
Trigger: GAATACGTGCGTGTCTGGGCAGAGTATGACCCTGCT...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAAGCAGGGTCATACTCTaGCCAGACACGCACGTATTC +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRASRVIL*PDTHVF
Trigger: GAATACGTGCGTGTCTGGGCAGAGTATGACCCTGCT...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTTGTCCTTATAGTGAATaGGGCCGCAGGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRCPYSE*GRRQQG
Trigger: ACCCTGCTGCCTGCGGCCGCATTCACTATAAGGACA...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTATGAGGACATTTCTTaGCTAAGCCGAGAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVYEDIS*LSREGA
Trigger: CGCCCCCTCTCGGCTTAGGCAAGAAATGTCCTCATA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTCTGCATCCATCTGCTaGTTGTCAGCTCCACCCTTG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVSASIC*LSAPPL
Trigger: CAAGGGTGGAGCTGACAAGCAGCAGATGGATGCAGA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCTGGCCATCATCTCCTTaGGAAGCTCTGCATCCATCT +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSWPSSP*EALHPS
Trigger: AGATGGATGCAGAGCTTCGCAAGGAGATGATGGCCA...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGGGTGAGTCCTCGCTaGCCGCTGAGTCGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLRVSPR*PLSRRR
Trigger: TCTTCTCCGACTCAGCGGGCAGCGAGGACTCACCCT...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238337.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGAAGTGTCGAAGTTGGTaGGCGGAGTCCCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVKCRSW*AESPHQ
Trigger: TTGATGAGGGGACTCCGCCCACCAACTTCGACACTT...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCTTCTGCTACCTCCTTaGCTTTCTGTAGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSLLLPP*LSVEPA
Trigger: AGCTGGCTCTACAGAAAGCCAAGGAGGTAGCAGAAG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGGACTTGGTAGGCTTCTaGTTCTTCTGCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRDLVGF*FFCCSF
Trigger: GAAGGAGCAGCAGAAGAACCAGAAGCCTACCAAGTC...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCGACTTGGTAGGCTTCTaGTTCTTCTGCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACDLVGF*FFCCSF
Trigger: GAAGGAGCAGCAGAAGAACCAGAAGCCTACCAAGTC...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGGCCAGCGGCAGGTCCTaGCGGCCCAGGTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRASGRS*RPRSCW
Trigger: CCAGCAGGACCTGGGCCGCCAGGACCTGCCGCTGGC...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTTGTGCTCGGGTTTCCTaGCAGTCTTCGCTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRCARVS*QSSLSW
Trigger: CCAACTCAGCGAAGACTGCCAGGAAACCCGAGCACA...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTCTCTCTCGAACTCCTTaGACTCGTCCGTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRLSRTP*TRPCSG
Trigger: TCCACTGCACGGACGAGTCCAAGGAGTTCGAGAGAG...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGACAGGTTGGGCCAAATaGCCATCATCTCCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRTGWAK*PSSPCE
Trigger: TTCGCAAGGAGATGATGGCCATTTGGCCCAACCTGT...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCATGGCCTGCAGTTTCTTaGCCTTGCTCTGCCGGTAAT +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAWPAVS*PCSAGN
Trigger: ATTACCGGCAGAGCAAGGCCAAGAAACTGCAGGCCA...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGGGAGGCTCCATGCGCTaGAACATGAGTGGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEGGSMR*NMSGVR
Trigger: CCGGACACCACTCATGTTCCAGCGCATGGAGCCTCC...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGGGAGGCTCCATGCGCTaGAACATGAGTGGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLGGSMR*NMSGVR
Trigger: CCGGACACCACTCATGTTCCAGCGCATGGAGCCTCC...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGGAGGGAAGGGCATTCTaGCTGGGTCCTCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEEGRAF*LGPPSC
Trigger: ACAGGAGGGAGGACCCAGCCAGAATGCCCTTCCCTC...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTTGGTCTGGCCTTCCATaGGGAGGTAGTGTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRWSGLP*GGSVRC
Trigger: ACAGCGAACACTACCTCCCCATGGAAGGCCAGACCA...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTAGGCTGAGCGCTTCATaGGGCTGGTATCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRRLSAS*GWYQRW
Trigger: CCATCTCTGATACCAGCCCCATGAAGCGCTCAGCCT...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGTCACCCGATTGGGTaGTCATGCTCAGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRGHPIG*SCSDLS
Trigger: GGACAGATCTGAGCATGACCACCCAATCGGGTGACC...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGCAGGTCACCCGATTaGGTGGTCATGCTCAGATCT +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRGRSPD*VVMLRS
Trigger: AGATCTGAGCATGACCACCCAATCGGGTGACCTGCC...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGGTGGTGGTGGTGGTGTaGCCGATGCTTCCGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEVVVVV*PMLPVL
Trigger: AAGGACCGGAAGCATCGGCCACACCACCACCACCAC...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGGTGGTGGTGGTGGTGTaGCCGATGCTTCCGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLVVVVV*PMLPVL
Trigger: AAGGACCGGAAGCATCGGCCACACCACCACCACCAC...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCGGATCATCGCCTTCATaGTTGACTTCAGGACGACTT +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACGSSPS*LTSGRL
Trigger: AAGTCGTCCTGAAGTCAATCATGAAGGCGATGATCC...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGGGATCATCGCCTTCATaGTTGACTTCAGGACGACTT +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRGSSPS*LTSGRL
Trigger: AAGTCGTCCTGAAGTCAATCATGAAGGCGATGATCC...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCCTTCCCAGTACGGCTaGCATTTGGTCCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSPSQYG*HLVPLG
Trigger: CCCCAACGGGACCAAATGTCAGCCGTACTGGGAAGG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCTCTGCTGTTGTCTTCTaGGCTTCAGAAAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSSAVVF*ASEKLS
Trigger: GGAGAGCTTTTCTGAAGCTCAGAAGACAACAGCAGA...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTCTGCTGTTGTCTTCTaGGCTTCAGAAAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRSAVVF*ASEKLS
Trigger: GGAGAGCTTTTCTGAAGCTCAGAAGACAACAGCAGA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCACCTCTTCTGCTTTTaGGATCCACTCCATGTATCC +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSHLFCF*DPLHVS
Trigger: GGATACATGGAGTGGATCTCAAAAGCAGAAGAGGTG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCGGCCTCCTCAGGGTTaGGCAGGTCTGTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLRPPQG*AGLSCF
Trigger: AAAGCAAGACAGACCTGCTCAACCCTGAGGAGGCCG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGCGGCCTCCTCAGGGTTaGGCAGGTCTGTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSERPPQG*AGLSCF
Trigger: AAAGCAAGACAGACCTGCTCAACCCTGAGGAGGCCG...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCGAGCTCGTAACACACTaGTTCCAAAGGATGTACCAG +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACELVTH*FQRMYQ
Trigger: CTGGTACATCCTTTGGAATCAGTGTGTTACGAGCTC...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCAGACAACCAGGTTTCTaGGAGATGCCCAGTACTTTG +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSRQPGF*EMPSTL
Trigger: CAAAGTACTGGGCATCTCTCAGAAACCTGGTTGTCT...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGAGACAACCAGGTTTCTaGGAGATGCCCAGTACTTTG +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRRQPGF*EMPSTL
Trigger: CAAAGTACTGGGCATCTCTCAGAAACCTGGTTGTCT...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGTGGTGGTGGAGAGGATaGACATGGAGCTGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEWWWRG*TWSCRA
Trigger: CGCCCTACAGCTCCATGTTCATCCTCTCCACCACCA...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGAAAAGTAGCATCCACTaGGTGCTTGAGGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVKSSIH*VLEDLW
Trigger: CCACAGGTCCTCAAGCACTCAGTGGATGCTACTTTT...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGAGGGTGGAGTTGAAGTaGACTGTGTTGTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRRVELK*TVLSSA
Trigger: AGCAGATGACAACACAGTTCACTTCAACTCCACCCT...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCCATCAGGGTGGAGTTaGAGTGAACTGTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSPSGWS*SELCCH
Trigger: ATGACAACACAGTTCACTTCAACTCCACCCTGATGG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGCCGGTAATACTCCATaGTCATCATGGCTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVAGNTP*SSWLRR
Trigger: TCTACGCAGCCATGATGATCATGGAGTATTACCGGC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTTGGCCACCGAACAGCTaGATCCCCAGGAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSWPPNS*IPRRAK
Trigger: CTTTGCCCTCCTGGGGATGCAGCTGTTCGGTGGCCA...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCACAGCTTCTGATTGGCTaGCTCTTCCTCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAQLLIG*LFLFLL
Trigger: GAGCAAGAAGAGGAAGAGGCAGCCAATCAGAAGCTG...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCCAGCAGGTTCTGCTTaGGCATCTCGCTGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSPAGSA*ASRWCA
Trigger: AGCGCACCAGCGAGATGCGCAAGCAGAACCTGCTGG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGTTGTTCTGGGGCATGTaGCTGGTCAGCGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSELFWGM*LVSGLA
Trigger: TGCCAAGCCGCTGACCAGGCACATGCCCCAGAACAA...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTCGATACTGGAAGCTCTaGTTGTTCTGGGGCATGTGC +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRRYWKL*LFWGMC
Trigger: GCACATGCCCCAGAACAAGCAGAGCTTCCAGTATCG...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTAAGTCCAGAGGAGAATaGGGATGGTGTAACCCTGGC +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRKSRGE*GWCNPG
Trigger: GCCAGGGTTACACCATCCGCATTCTCCTCTGGACTT...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTTATGAGGACATTTCTTaGCTAAGCCGAGAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRYEDIS*LSREGA
Trigger: CGCCCCCTCTCGGCTTAGGCAAGAAATGTCCTCATA...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTAACTGTGTTGTCATCTaGTACCGGCAGGTCCATCCG +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRNCVVI*YRQVHP
Trigger: CGGATGGACCTGCCGGTAGCAGATGACAACACAGTT...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTGGCCATCATCTCCTTaGGAAGCTCTGCATCCATCT +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVWPSSP*EALHPS
Trigger: AGATGGATGCAGAGCTTCGCAAGGAGATGATGGCCA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGACGGGCTCTCCTTCATaGCGCCTTCGTGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSETGSPS*RLREPS
Trigger: TGATGGCTCACGAAGGCGGCATGAAGGAGAGCCCGT...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTCCGATTGGGTGGTCATaGTCAGATCTGTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRPIGWS*SDLSPN
Trigger: GTTTGGGGACAGATCTGAGCATGACCACCCAATCGG...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGGATTCCAATGAAGTATaGTTCCGTGTCATCCAGCCG +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRDSNEV*FRVIQP
Trigger: CGGCTGGATGACACGGAACCATACTTCATTGGAATC...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGAAAAGTGTCGAAGTTaGTGGGCGGAGTCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGREKCRS*WAESPH
Trigger: ATGAGGGGACTCCGCCCACCAACTTCGACACTTTTC...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCTCCTTCACGGCTATaGACATGTTGGCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRAPSRL*TCWLQT
Trigger: TGTCTGCAGCCAACATGTCCATAGCCGTGAAGGAGC...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCGCACGGCTCTTGTTaGTGTTGTTGTTACGGTTCT +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAAHGSC*CCCYGS
Trigger: AGAACCGTAACAACAACACCAACAAGAGCCGTGCGC...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGGCTGGATTGGCCTGGTaGTGGACAAGTTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLAGLAW*WTSWDQ
Trigger: CTGGTCCCAACTTGTCCACCACCAGGCCAATCCAGC...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCCTGCTGGATTGGCCTaGTGGTGGACAAGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLPAGLA*WWTSWD
Trigger: GTCCCAACTTGTCCACCACCAGGCCAATCCAGCAGG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCTTTGGCAGTGGGTCTaGGTTGGCGTTTTTGTTTAC +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSLWQWV*VGVFVY
Trigger: GTAAACAAAAACGCCAACCCAGACCCACTGCCAAAG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCCTTTGGCAGTGGGTCTaGGTTGGCGTTTTTGTTTAC +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACLWQWV*VGVFVY
Trigger: GTAAACAAAAACGCCAACCCAGACCCACTGCCAAAG...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCCTCTTTCTTTGGCAGTaGGTCTGGGTTGGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACLFLWQ*VWVGVF
Trigger: AAAAACGCCAACCCAGACCCACTGCCAAAGAAAGAG...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCTCTTTCTTTGGCAGTaGGTCTGGGTTGGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSLFLWQ*VWVGVF
Trigger: AAAAACGCCAACCCAGACCCACTGCCAAAGAAAGAG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGCTTGAGGACCTGTaGCCAGCCCTCTCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSVLEDL*PALSCG
Trigger: TCCACAGGAGAGGGCTGGCCACAGGTCCTCAAGCAC...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGAAGCATGAGCGCTTaGAAGAAGGTCCGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACRSMSA*KKVRKL
Trigger: TAACTTCCGGACCTTCTTCCAAGCGCTCATGCTTCT...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAACAGGTTGGGCCAAATaGCCATCATCTCCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRATGWAK*PSSPCE
Trigger: TTCGCAAGGAGATGATGGCCATTTGGCCCAACCTGT...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCTCTTCTGAGACAGGTTaGGCCAAATGGCCATCATCT +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACSSETG*AKWPSS
Trigger: AGATGATGGCCATTTGGCCCAACCTGTCTCAGAAGA...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGGAAGGGCATTCTGGCTaGGTCCTCCCTCCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEEGHSG*VLPPVL
Trigger: CAACACAGGAGGGAGGACCCAGCCAGAATGCCCTTC...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGAGGGAAGGGCATTCTaGCTGGGTCCTCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSEGRAF*LGPPSC
Trigger: ACAGGAGGGAGGACCCAGCCAGAATGCCCTTCCCTC...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGCAGGTGCCAGTCTTCTaGAACATCTCTTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEQVPVF*NISWAR
Trigger: GCGGGCCCAAGAGATGTTCCAGAAGACTGGCACCTG...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCAGGTGCCAGTCTTCTaGAACATCTCTTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLQVPVF*NISWAR
Trigger: GCGGGCCCAAGAGATGTTCCAGAAGACTGGCACCTG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGTCCCGGCGACGTTGGTaGTACCGTTGGTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSESRRRW*YRWFSS
Trigger: TGAGGAGAACCAACGGTACCACCAACGTCGCCGGGA...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGTCCCGGCGACGTTGGTaGTACCGTTGGTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLSRRRW*YRWFSS
Trigger: TGAGGAGAACCAACGGTACCACCAACGTCGCCGGGA...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCCAGCTTGGCACTTTTaGTGCTGGCTCTGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSPAWHF*CWLWRR
Trigger: CCTTCGCCAGAGCCAGCATCAAAAGTGCCAAGCTGG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGAGACAACCAGGTTTCTaGGAGATGCCCAGTACTTTG +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVRQPGF*EMPSTL
Trigger: CAAAGTACTGGGCATCTCTCAGAAACCTGGTTGTCT...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGACGAGCACAGGAAGATaGACGAGACAAAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRTSTGR*TRQSRS
Trigger: ACTTCTACTTTGTCTCGTTCATCTTCCTGTGCTCGT...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCTTGCAAGCAACCCTATaGGGACATTTCTTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSLQATL*GHFLPK
Trigger: CTTAGGCAAGAAATGTCCTCATAGGGTTGCTTGCAA...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCCATCAGGGTGGAGTTaGAGTGAACTGTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVPSGWS*SELCCH
Trigger: ATGACAACACAGTTCACTTCAACTCCACCCTGATGG...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCACCATCAGGGTGGAGTTaGAGTGAACTGTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAPSGWS*SELCCH
Trigger: ATGACAACACAGTTCACTTCAACTCCACCCTGATGG...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGTGGACTTGTGAGGTGTaGCCAGCAGATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLWTCEV*PADPGS
Trigger: AGACCCTGGATCTGCTGGTCACACCTCACAAGTCCA...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCCATGCGCTGGAACATaGGTGGTGTCCGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSPCAGT*VVSGSA
Trigger: AGCAGAACCGGACACCACTCATGTTCCAGCGCATGG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCTCTGCGCCATCGACTaGTTGTACATCCTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLLCAID*LYILCA
Trigger: AGCGCAGAGGATGTACAAGCAGTCGATGGCGCAGAG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTATCTCGCTGGTGCGCTaGTCCCACACCGACTTGGTA +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSISLVR*SHTDLV
Trigger: TACCAAGTCGGTGTGGGAGCAGCGCACCAGCGAGAT...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTTTGTTACGGTTCTCCTaGGGGTCCACCACAAGCGGC +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSLLRFS*GSTTSG
Trigger: GCCGCTTGTGGTGGACCCGCAGGAGAACCGTAACAA...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGGTAGCATCCACTGAGTaGTTGAGGACCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLVASTE*LRTCGQ
Trigger: CTGGCCACAGGTCCTCAAGCACTCAGTGGATGCTAC...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGTTCTGGCCTGAGGGGTaGTGTGCATTTTGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLFWPEG*CAFCAP
Trigger: AGGCGCACAAAATGCACAGCACCCCTCAGGCCAGAA...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTCACGTTCCCTTTCTTTaGCAAACTCCCCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRHVPFL*QTPQTA
Trigger: TGCTGTCTGGGGAGTTTGCCAAAGAAAGGGAACGTG...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTCTTCTGCTACCTCCTTaGCTTTCTGTAGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRLLLPP*LSVEPA
Trigger: AGCTGGCTCTACAGAAAGCCAAGGAGGTAGCAGAAG...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGACTTGGTAGGCTTCTaGTTCTTCTGCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRDLVGF*FFCCSF
Trigger: GAAGGAGCAGCAGAAGAACCAGAAGCCTACCAAGTC...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCGCACGGCTCTTGTTaGTGTTGTTGTTACGGTTCT +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRAHGSC*CCCYGS
Trigger: AGAACCGTAACAACAACACCAACAAGAGCCGTGCGC...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGTGGCCCAGGCTGTCGTaGGGACTGGCAGGTTCCCCG +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRWPRLS*GLAGSP
Trigger: CGGGGAACCTGCCAGTCCCCACGACAGCCTGGGCCA...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCTCTCTCGAACTCCTTaGACTCGTCCGTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLLSRTP*TRPCSG
Trigger: TCCACTGCACGGACGAGTCCAAGGAGTTCGAGAGAG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGAGAAGCATGAGCGCTTaGAAGAAGGTCCGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVRSMSA*KKVRKL
Trigger: TAACTTCCGGACCTTCTTCCAAGCGCTCATGCTTCT...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTACAGGTTGGGCCAAATaGCCATCATCTCCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRTGWAK*PSSPCE
Trigger: TTCGCAAGGAGATGATGGCCATTTGGCCCAACCTGT...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGCGCTGGAACATGAGTaGTGTCCGGTTCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSALEHE*CPVLLL
Trigger: GAGGAGCAGAACCGGACACCACTCATGTTCCAGCGC...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCAGGTGCCAGTCTTCTaGAACATCTCTTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSQVPVF*NISWAR
Trigger: GCGGGCCCAAGAGATGTTCCAGAAGACTGGCACCTG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCGCATCTCCACAGACTaGGAGTTGGGCTGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLRISTD*ELGWLL
Trigger: TAACAGCCAGCCCAACTCCCAGTCTGTGGAGATGCG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAGGCTGAGCGCTTCATaGGGCTGGTATCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSERLSAS*GWYQRW
Trigger: CCATCTCTGATACCAGCCCCATGAAGCGCTCAGCCT...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGGGTCACCCGATTGGGTaGTCATGCTCAGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLGHPIG*SCSDLS
Trigger: GGACAGATCTGAGCATGACCACCCAATCGGGTGACC...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCCACGACAAAGTCCATaGCGTTCCAGCCATTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLPRQSP*RSSHSS
Trigger: TGAGGAATGGCTGGAACGTCATGGACTTTGTCGTGG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGATCATCGCCTTCATaGTTGACTTCAGGACGACTT +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRGSSPS*LTSGRL
Trigger: AAGTCGTCCTGAAGTCAATCATGAAGGCGATGATCC...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAGGATGTTGTCGAACTaGGTGATGCCGTTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSERMLSN*VMPLLG
Trigger: GCCCAACAACGGCATCACTCAGTTCGACAACATCCT...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGACTCCATGTATCCATTaGGCTCACGTTCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVTPCIH*AHVQSA
Trigger: AGCAGATTGAACGTGAGCTCAATGGATACATGGAGT...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGGCTTTGGCAGCCGCTTaGTGGTCTTTAGAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEALAAA*WSLEVV
Trigger: TACGACCTCTAAAGACCATCAAGCGGCTGCCAAAGC...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCATAAGGTAGGGCCTTaGAGGACTGCACGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLHKVGP*RTARKS
Trigger: GGACTTTCGTGCAGTCCTTCAAGGCCCTACCTTATG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGTTATTGTGCTCCGTaGTTTGGAATTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACSYCAP*FGIHPR
Trigger: ACGAGGATGAATTCCAAATCACGGAGCACAATAACT...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGAGTTATTGTGCTCCGTaGTTTGGAATTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRSYCAP*FGIHPR
Trigger: ACGAGGATGAATTCCAAATCACGGAGCACAATAACT...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGACGAGCACAGGAAGATaGACGAGACAAAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVTSTGR*TRQSRS
Trigger: ACTTCTACTTTGTCTCGTTCATCTTCCTGTGCTCGT...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTAGGGTGGAGTTGAAGTaGACTGTGTTGTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRRVELK*TVLSSA
Trigger: AGCAGATGACAACACAGTTCACTTCAACTCCACCCT...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAGATCCAGGGTCTTCTaGGACAGGTTGGGCCAAATG +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSERSRVF*DRLGQM
Trigger: CATTTGGCCCAACCTGTCTCAGAAGACCCTGGATCT...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTTGGACTTGTGAGGTGTaGCCAGCAGATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSWTCEV*PADPGS
Trigger: AGACCCTGGATCTGCTGGTCACACCTCACAAGTCCA...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCAGGTTTCTGAGAGATaGCCAGTACTTTGTGACTTT +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSQVSER*PVLCDF
Trigger: AAAGTCACAAAGTACTGGGCATCTCTCAGAAACCTG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGCAGGGGACTCACTTCTaGTACCTCCTTGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEQGTHF*YLLGFL
Trigger: CAGAAAGCCAAGGAGGTAGCAGAAGTGAGTCCCCTG...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCGATACTGGAAGCTCTaGTTGTTCTGGGGCATGTGC +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLRYWKL*LFWGMC
Trigger: GCACATGCCCCAGAACAAGCAGAGCTTCCAGTATCG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCCAGAGGAGAATaGGGATGGTGTAACCCTGGC +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEKSRGE*GWCNPG
Trigger: GCCAGGGTTACACCATCCGCATTCTCCTCTGGACTT...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGGGCCTTGAAGGACTaGACGAAAGTCCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLRALKD*TKVQRR
Trigger: TCTCCTCTGGACTTTCGTGCAGTCCTTCAAGGCCCT...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAACTGTGTTGTCATCTaGTACCGGCAGGTCCATCCG +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSENCVVI*YRQVHP
Trigger: CGGATGGACCTGCCGGTAGCAGATGACAACACAGTT...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAACTGTGTTGTCATCTaGTACCGGCAGGTCCATCCG +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLNCVVI*YRQVHP
Trigger: CGGATGGACCTGCCGGTAGCAGATGACAACACAGTT...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCACATGATCATCATGGCTaGGTAGATCTTACCCACTGT +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAHDHHG*VDLTHC
Trigger: ACAGTGGGTAAGATCTACGCAGCCATGATGATCATG...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTTCCTCTCGCATGGCCTaGAGTTTCTTGGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSSSRMA*SFLALL
Trigger: GAGCAAGGCCAAGAAACTGCAGGCCATGCGAGAGGA...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCCGATTGGGTGGTCATaGTCAGATCTGTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLPIGWS*SDLSPN
Trigger: GTTTGGGGACAGATCTGAGCATGACCACCCAATCGG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTCGAAGTTGGTaGGCGGAGTCCCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEKCRSW*AESPHQ
Trigger: TTGATGAGGGGACTCCGCCCACCAACTTCGACACTT...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGGCTCCTTCACGGCTATaGACATGTTGGCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLAPSRL*TCWLQT
Trigger: TGTCTGCAGCCAACATGTCCATAGCCGTGAAGGAGC...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGCGGCCCAGGTCCTGCTaGATTGGCCTGGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRRPRSC*IGLVVD
Trigger: GTCCACCACCAGGCCAATCCAGCAGGACCTGGGCCG...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGTGGGCGTCCTGCGGCTaGCAGCGTTCTGGGGATTGG +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRWASCG*QRSGDW
Trigger: CCAATCCCCAGAACGCTGCCAGCCGCAGGACGCCCA...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTCTTTGGCAGTGGGTCTaGGTTGGCGTTTTTGTTTAC +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRLWQWV*VGVFVY
Trigger: GTAAACAAAAACGCCAACCCAGACCCACTGCCAAAG...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTAGAAGCATGAGCGCTTaGAAGAAGGTCCGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRRSMSA*KKVRKL
Trigger: TAACTTCCGGACCTTCTTCCAAGCGCTCATGCTTCT...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGTGGCCTGCAGTTTCTTaGCCTTGCTCTGCCGGTAAT +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLWPAVS*PCSAGN
Trigger: ATTACCGGCAGAGCAAGGCCAAGAAACTGCAGGCCA...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGCCAGTCGCCGGGCTTTaGGTCCCAGCACAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRPVAGL*VPAQRL
Trigger: CAGCCTCTGTGCTGGGACCCAAAGCCCGGCGACTGG...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGTGCATTTTGTGCGCCTaGTGGGCCAAGATGACATCC +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLCILCA*WAKMTS
Trigger: GGATGTCATCTTGGCCCACCAGGCGCACAAAATGCA...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAACAGAAGATTCCAATaGAGTATGGTTCCGTGTCAT +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACNRRFQ*SMVPCH
Trigger: ATGACACGGAACCATACTTCATTGGAATCTTCTGTT...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTAGAAGGCCTGAGTTTTaGCCATGCGGCGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSRRPEF*PCGGCR
Trigger: TCTACATCCGCCGCATGGTCAAAACTCAGGCCTTCT...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGGCCGGTAATACTCCATaGTCATCATGGCTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEAGNTP*SSWLRR
Trigger: TCTACGCAGCCATGATGATCATGGAGTATTACCGGC...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGCCTCCTGGGTCCAGCTaGGTGGAGGGAAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRPPGSS*VEGRAF
Trigger: GAATGCCCTTCCCTCCACTCAGCTGGACCCAGGAGG...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGGTAGTGTTCGCTGTCTaGGTAGCCATCAGTACCCAT +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEVVFAV*VAISTH
Trigger: ATGGGTACTGATGGCTACTCAGACAGCGAACACTAC...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCACAGGTTTCTGAGAGATaGCCAGTACTTTGTGACTTT +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAQVSER*PVLCDF
Trigger: AAAGTCACAAAGTACTGGGCATCTCTCAGAAACCTG...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCAGCTTCTGATTGGCTaGCTCTTCCTCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLQLLIG*LFLFLL
Trigger: GAGCAAGAAGAGGAAGAGGCAGCCAATCAGAAGCTG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGTCCGGAAGTTATTGTaGTCCGTGATTTGGAATTCA +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVVRKLL*SVIWNS
Trigger: TGAATTCCAAATCACGGAGCACAATAACTTCCGGAC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTTATGAGGACATTTCTTaGCTAAGCCGAGAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSYEDIS*LSREGA
Trigger: CGCCCCCTCTCGGCTTAGGCAAGAAATGTCCTCATA...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGGACATTTGGTCCCGTTaGGGCAGGTGCGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRDIWSR*GRCGQA
Trigger: AGCCTGCCCGCACCTGCCCCAACGGGACCAAATGTC...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCAGTCATTATTGCTGCTaGAAAAGTGTCGAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSSHYCC*KSVEVG
Trigger: ACCAACTTCGACACTTTTCCAGCAGCAATAATGACT...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGCTTCTGCTACCTCCTTaGCTTTCTGTAGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSELLLPP*LSVEPA
Trigger: AGCTGGCTCTACAGAAAGCCAAGGAGGTAGCAGAAG...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGCTCCTTCACGGCTATaGACATGTTGGCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSAPSRL*TCWLQT
Trigger: TGTCTGCAGCCAACATGTCCATAGCCGTGAAGGAGC...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGAGGCATGTCGATGGGTaGCCCTCGCTCTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRRHVDG*PSLWAP
Trigger: TGGAGCCCAGAGCGAGGGCCACCCATCGACATGCCT...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGCCTTCCCAGTACGGCTaGCATTTGGTCCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRPSQYG*HLVPLG
Trigger: CCCCAACGGGACCAAATGTCAGCCGTACTGGGAAGG...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGGTTCCAAGTGTTCCCTaGGGCATCGTTGCTATTGTA +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLVPSVP*GIVAIV
Trigger: TACAATAGCAACGATGCCTCAGGGAACACTTGGAAC...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGGTTCCAAGTGTTCCCTaGGGCATCGTTGCTATTGTA +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEVPSVP*GIVAIV
Trigger: TACAATAGCAACGATGCCTCAGGGAACACTTGGAAC...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCACCTCTTCTGCTTTTaGGATCCACTCCATGTATCC +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLHLFCF*DPLHVS
Trigger: GGATACATGGAGTGGATCTCAAAAGCAGAAGAGGTG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGGGTGGAGTTGAAGTaGACTGTGTTGTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLRVELK*TVLSSA
Trigger: AGCAGATGACAACACAGTTCACTTCAACTCCACCCT...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGCCATCAGGGTGGAGTTaGAGTGAACTGTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLPSGWS*SELCCH
Trigger: ATGACAACACAGTTCACTTCAACTCCACCCTGATGG...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGCCGGTAATACTCCATaGTCATCATGGCTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSAGNTP*SSWLRR
Trigger: TCTACGCAGCCATGATGATCATGGAGTATTACCGGC...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGTTCATGCCGCCTTCGTaGGCCATCAGGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRFMPPS*AIRPPP
Trigger: AGGAGGAGGCCTGATGGCTCACGAAGGCGGCATGAA...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCACACAGTCATTATTGCTaGTGGAAAAGTGTCGAAGTT +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAHSHYC*WKSVEV
Trigger: AACTTCGACACTTTTCCAGCAGCAATAATGACTGTG...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAAACACAGTCATTATTaGTGCTGGAAAAGTGTCGAA +
Preference number: 4 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACKHSHY*CWKSVE
Trigger: TTCGACACTTTTCCAGCAGCAATAATGACTGTGTTT...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCAAACACAGTCATTATTaGTGCTGGAAAAGTGTCGAA +
Preference number: 4 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSKHSHY*CWKSVE
Trigger: TTCGACACTTTTCCAGCAGCAATAATGACTGTGTTT...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGACCGTGAGGCAGTTCTaGCGGACAGGGATGGGGTTG +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRTVRQF*RTGMGL
Trigger: CAACCCCATCCCTGTCCGCCAGAACTGCCTCACGGT...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCCTCTTCAAAGCAGGTaGTATGAAATTTCCCCATAT +
Preference number: 4 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVPLQSR*YEISPY
Trigger: ATATGGGGAAATTTCATACCACCTGCTTTGAAGAGG...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGTGTCCCACACGGAGCTaGCGACTCACCCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRCPTRS*RLTLDV
Trigger: GACATCCAGGGTGAGTCGCCAGCTCCGTGTGGGACA...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCATCATCAAAATTAAATTaGCCACCGAACAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRASSKLN*PPNSCI
Trigger: GATGCAGCTGTTCGGTGGCCAATTTAATTTTGATGA...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAAGTCATTATTGCTGCTaGAAAAGTGTCGAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRASHYCC*KSVEVG
Trigger: ACCAACTTCGACACTTTTCCAGCAGCAATAATGACT...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGGCGTTTTTGTTTACTTaGACCACGGTGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEAFLFT*TTVWLR
Trigger: CCTCAACCACACCGTGGTCCAAGTAAACAAAAACGC...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGTGCCACATTCGATACTaGAAGCTCTGCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLCHIRY*KLCLFW
Trigger: CCAGAACAAGCAGAGCTTCCAGTATCGAATGTGGCA...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGTCTTCTGAGACAGGTTaGGCCAAATGGCCATCATCT +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLSSETG*AKWPSS
Trigger: AGATGATGGCCATTTGGCCCAACCTGTCTCAGAAGA...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGGGAGGCTCCATGCGCTaGAACATGAGTGGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRGGSMR*NMSGVR
Trigger: CCGGACACCACTCATGTTCCAGCGCATGGAGCCTCC...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGGAGGGAAGGGCATTCTaGCTGGGTCCTCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALREGRAF*LGPPSC
Trigger: ACAGGAGGGAGGACCCAGCCAGAATGCCCTTCCCTC...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAGGGAGGCCATTCAGTaGTCTTTTTGGCGTATTTTC +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEREAIQ*SFWRIF
Trigger: GAAAATACGCCAAAAAGATCACTGAATGGCCTCCCT...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTTCCAAGTGTTCCCTaGGGCATCGTTGCTATTGTA +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSVPSVP*GIVAIV
Trigger: TACAATAGCAACGATGCCTCAGGGAACACTTGGAAC...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGACTCCATGTATCCATTaGGCTCACGTTCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSETPCIH*AHVQSA
Trigger: AGCAGATTGAACGTGAGCTCAATGGATACATGGAGT...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGACGAGCACAGGAAGATaGACGAGACAAAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSETSTGR*TRQSRS
Trigger: ACTTCTACTTTGTCTCGTTCATCTTCCTGTGCTCGT...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAGCTCACGTTCAATCTaGTGTTGTCTTCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSESSRSI*CCLLSF
Trigger: GAAGCTCAGAAGACAACAGCAGATTGAACGTGAGCT...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAAAACACAGTCATTATTaGTGCTGGAAAAGTGTCGAA +
Preference number: 4 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAKHSHY*CWKSVE
Trigger: TTCGACACTTTTCCAGCAGCAATAATGACTGTGTTT...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGCATGATCATCATGGCTaGGTAGATCTTACCCACTGT +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEHDHHG*VDLTHC
Trigger: ACAGTGGGTAAGATCTACGCAGCCATGATGATCATG...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTCCTCTTCAAAGCAGGTaGTATGAAATTTCCCCATAT +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRPLQSR*YEISPY
Trigger: ATATGGGGAAATTTCATACCACCTGCTTTGAAGAGG...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGAGTACGGCTGACATTTaGTCCCGTTGGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRSTADI*SRWGRC
Trigger: GCACCTGCCCCAACGGGACCAAATGTCAGCCGTACT...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGCGTTTTTGTTTACTTaGACCACGGTGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSAFLFT*TTVWLR
Trigger: CCTCAACCACACCGTGGTCCAAGTAAACAAAAACGC...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTTCTTCTGAGACAGGTTaGGCCAAATGGCCATCATCT +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSSSETG*AKWPSS
Trigger: AGATGATGGCCATTTGGCCCAACCTGTCTCAGAAGA...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGGAAGGGCATTCTGGCTaGGTCCTCCCTCCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALREGHSG*VLPPVL
Trigger: CAACACAGGAGGGAGGACCCAGCCAGAATGCCCTTC...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGTCCCGGCGACGTTGGTaGTACCGTTGGTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRSRRRW*YRWFSS
Trigger: TGAGGAGAACCAACGGTACCACCAACGTCGCCGGGA...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTAGGGAGGCCATTCAGTaGTCTTTTTGGCGTATTTTC +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSREAIQ*SFWRIF
Trigger: GAAAATACGCCAAAAAGATCACTGAATGGCCTCCCT...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTACTCCATGTATCCATTaGGCTCACGTTCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSTPCIH*AHVQSA
Trigger: AGCAGATTGAACGTGAGCTCAATGGATACATGGAGT...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTAGAGTCCTAAGAAAATaGATTCTGCATAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRRVLRK*ILHSRG
Trigger: TCCTCTACTATGCAGAATTCATTTTCTTAGGACTCT...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGTCCGGAAGAGAAGCATaGGCGCTTGGAAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRSGREA*ALGRRS
Trigger: GGACCTTCTTCCAAGCGCTCATGCTTCTCTTCCGGA...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGCTCTGCGCCATCGACTaGTTGTACATCCTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRLCAID*LYILCA
Trigger: AGCGCAGAGGATGTACAAGCAGTCGATGGCGCAGAG...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGGCTCCATCAAAAGGGTaGCTCTGCTCCACGTCTGTC +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRAPSKG*LCSTSV
Trigger: GACAGACGTGGAGCAGAGGCACCCTTTTGATGGAGC...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGCAGGTTTCTGAGAGATaGCCAGTACTTTGTGACTTT +
Preference number: 4 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEQVSER*PVLCDF
Trigger: AAAGTCACAAAGTACTGGGCATCTCTCAGAAACCTG...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGGTCCGGAAGTTATTGTaGTCCGTGATTTGGAATTCA +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLVRKLL*SVIWNS
Trigger: TGAATTCCAAATCACGGAGCACAATAACTTCCGGAC...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGTGTCCTTATAGTGAATaGGGCCGCAGGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRCPYSE*GRRQQG
Trigger: ACCCTGCTGCCTGCGGCCGCATTCACTATAAGGACA...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCATGATCATCATGGCTaGGTAGATCTTACCCACTGT +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSHDHHG*VDLTHC
Trigger: ACAGTGGGTAAGATCTACGCAGCCATGATGATCATG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGTGTGCTCGGGTTTCCTaGCAGTCTTCGCTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRCARVS*QSSLSW
Trigger: CCAACTCAGCGAAGACTGCCAGGAAACCCGAGCACA...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGCTCTCTCGAACTCCTTaGACTCGTCCGTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRLSRTP*TRPCSG
Trigger: TCCACTGCACGGACGAGTCCAAGGAGTTCGAGAGAG...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGTGGTCTGGCCTTCCATaGGGAGGTAGTGTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRWSGLP*GGSVRC
Trigger: ACAGCGAACACTACCTCCCCATGGAAGGCCAGACCA...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCTGGGAGGCGGGGCATaGAGGCGGCCCTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSLGGGA*RRPWSG
Trigger: GCCAGACCAGGGCCGCCTCCATGCCCCGCCTCCCAG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGAGGATGTTGTCGAACTaGGTGATGCCGTTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRRMLSN*VMPLLG
Trigger: GCCCAACAACGGCATCACTCAGTTCGACAACATCCT...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCAGGTTTCTGAGAGATaGCCAGTACTTTGTGACTTT +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSQVSER*PVLCDF
Trigger: AAAGTCACAAAGTACTGGGCATCTCTCAGAAACCTG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTCCGGAAGTTATTGTaGTCCGTGATTTGGAATTCA +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSVRKLL*SVIWNS
Trigger: TGAATTCCAAATCACGGAGCACAATAACTTCCGGAC...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGAGCAGGGTCATACTCTaGCCAGACACGCACGTATTC +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRSRVIL*PDTHVF
Trigger: GAATACGTGCGTGTCTGGGCAGAGTATGACCCTGCT...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGTATGAGGACATTTCTTaGCTAAGCCGAGAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRYEDIS*LSREGA
Trigger: CGCCCCCTCTCGGCTTAGGCAAGAAATGTCCTCATA...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAGAGAGCGCTCAGAGGTaGGGTGGCCACGGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQESAQR*GGHGPG
Trigger: GCCGGGACCGTGGCCACCGCACCTCTGAGCGCTCTC...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGCCAGCCGCTCAGACATaGGTGTCTTGTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRPAAQT*VSCHHQ
Trigger: CTGATGATGACAAGACACCCATGTCTGAGCGGCTGG...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGTCATCAAAATTAAATTaGCCACCGAACAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLSSKLN*PPNSCI
Trigger: GATGCAGCTGTTCGGTGGCCAATTTAATTTTGATGA...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAGCCAGCGGCAGGTCCTaGCGGCCCAGGTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSASGRS*RPRSCW
Trigger: CCAGCAGGACCTGGGCCGCCAGGACCTGCCGCTGGC...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAGGGGGAAGGCCGCTGTaGCCCAGGCTGTCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQGGRPL*PRLSWG
Trigger: TCCCCACGACAGCCTGGGCCACAGCGGCCTTCCCCC...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGGACTCGTCCGTGCAGTaGAAGAACTTGCCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRDSSVQ*KNLPLK
Trigger: CTTCAAGGGCAAGTTCTTCCACTGCACGGACGAGTC...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATCTGGGAGGCGGGGCATaGAGGCGGCCCTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINLGGGA*RRPWSG
Trigger: GCCAGACCAGGGCCGCCTCCATGCCCCGCCTCCCAG...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGACTGGGAGGCGGGGCATaGAGGCGGCCCTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRLGGGA*RRPWSG
Trigger: GCCAGACCAGGGCCGCCTCCATGCCCCGCCTCCCAG...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGCACCCTTGGCAATTTTaGTATCAAGGGCGGTTCGGA +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRHPWQF*YQGRFG
Trigger: TCCGAACCGCCCTTGATATCAAAATTGCCAAGGGTG...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGGCCGGTAATACTCCATaGTCATCATGGCTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRAGNTP*SSWLRR
Trigger: TCTACGCAGCCATGATGATCATGGAGTATTACCGGC...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAAACACAGTCATTATTaGTGCTGGAAAAGTGTCGAA +
Preference number: 4 (lower is better)
Translates to: SLQAVISLAWPASTPVGLKHSHY*CWKSVE
Trigger: TTCGACACTTTTCCAGCAGCAATAATGACTGTGTTT...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGCAGCTTCTGATTGGCTaGCTCTTCCTCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRQLLIG*LFLFLL
Trigger: GAGCAAGAAGAGGAAGAGGCAGCCAATCAGAAGCTG...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGTGGCCATCATCTCCTTaGGAAGCTCTGCATCCATCT +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRWPSSP*EALHPS
Trigger: AGATGGATGCAGAGCTTCGCAAGGAGATGATGGCCA...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCCTCTTCAAAGCAGGTaGTATGAAATTTCCCCATAT +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSPLQSR*YEISPY
Trigger: ATATGGGGAAATTTCATACCACCTGCTTTGAAGAGG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGCACGTTCCCTTTCTTTaGCAAACTCCCCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRHVPFL*QTPQTA
Trigger: TGCTGTCTGGGGAGTTTGCCAAAGAAAGGGAACGTG...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCTGGCCCAGGCTGTCGTaGGGACTGGCAGGTTCCCCG +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSWPRLS*GLAGSP
Trigger: CGGGGAACCTGCCAGTCCCCACGACAGCCTGGGCCA...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGACAGGTTGGGCCAAATaGCCATCATCTCCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRTGWAK*PSSPCE
Trigger: TTCGCAAGGAGATGATGGCCATTTGGCCCAACCTGT...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAGCTCCCGACCTTCGCTaGGCGAGCGGGACCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRAPDLR*ASGTSA
Trigger: AGCGCTGGTCCCGCTCGCCCAGCGAAGGTCGGGAGC...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATGCTCCCGACCTTCGCTaGGCGAGCGGGACCAGCGCT +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINAPDLR*ASGTSA
Trigger: AGCGCTGGTCCCGCTCGCCCAGCGAAGGTCGGGAGC...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGTCTGCTGTTGTCTTCTaGGCTTCAGAAAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRSAVVF*ASEKLS
Trigger: GGAGAGCTTTTCTGAAGCTCAGAAGACAACAGCAGA...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTAGAGTCCTAAGAAAATaGATTCTGCATAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: QAVISLAWPASTPVGLRSRVLRK*ILHSRG
Trigger: TCCTCTACTATGCAGAATTCATTTTCTTAGGACTCT...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATGGCGGCCCAGGTCCTaGTGGATTGGCCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQWRPRS*WIGLVV
Trigger: CACCACCAGGCCAATCCAGCAGGACCTGGGCCGCCA...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCGGGGTTGGACGGGTTaGCCGGATTGTTGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSRGWTG*PDCWAS
Trigger: GGACGCCCAACAATCCGGGCAACCCGTCCAACCCCG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAACAGCGCCTCGCGGCTaGCCAGCAGGTTCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQTAPRG*PAGSAC
Trigger: GCAAGCAGAACCTGCTGGCCAGCCGCGAGGCGCTGT...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGTGCCACATTCGATACTaGAAGCTCTGCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRCHIRY*KLCLFW
Trigger: CCAGAACAAGCAGAGCTTCCAGTATCGAATGTGGCA...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGAGAAGCATGAGCGCTTaGAAGAAGGTCCGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRRSMSA*KKVRKL
Trigger: TAACTTCCGGACCTTCTTCCAAGCGCTCATGCTTCT...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCATCTCTTGGGCCCGCTaGGTCACCCAGGACGGGCTC +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSISWAR*VTQDGL
Trigger: GAGCCCGTCCTGGGTGACCCAGCGGGCCCAAGAGAT...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAACCGCGTAGTAACCATTaGGCAGCCTGCGGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQPRSNH*AACGRG
Trigger: GCCACGGCCGCAGGCTGCCCAATGGTTACTACGCGG...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAACCTGGCAGTCTTCGCTaGGTTGGGCTGGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQPGSLR*VGLGAA
Trigger: AGCAGCACCCAGCCCAACTCAGCGAAGACTGCCAGG...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGACGAGCACAGGAAGATaGACGAGACAAAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRTSTGR*TRQSRS
Trigger: ACTTCTACTTTGTCTCGTTCATCTTCCTGTGCTCGT...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGTTGCAAGCAACCCTATaGGGACATTTCTTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRLQATL*GHFLPK
Trigger: CTTAGGCAAGAAATGTCCTCATAGGGTTGCTTGCAA...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAACCTCCTGGGTCCAGCTaGGTGGAGGGAAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQPPGSS*VEGRAF
Trigger: GAATGCCCTTCCCTCCACTCAGCTGGACCCAGGAGG...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAGGGCTGGGCTTCCACTaGCGGAACTACTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQGLGFH*RNYCPV
Trigger: GACAGGGCAGTAGTTCCGTCAGTGGAAGCCCAGCCC...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCCTGGTGGGCCAAGATaGCATCCCGGTGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSPGGPR*HPGGPP
Trigger: TGGTGGACCACCGGGATGTCATCTTGGCCCACCAGG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATTGCTTGTACATCCTCTaGGCTCCGGGCTGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINCLYIL*APGCPP
Trigger: GGGCGGGCAGCCCGGAGCGCAGAGGATGTACAAGCA...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCATGCTTGTACATCCTCTaGGCTCCGGGCTGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSCLYIL*APGCPP
Trigger: GGGCGGGCAGCCCGGAGCGCAGAGGATGTACAAGCA...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000121390.8
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCATGGCGGCCCAGGTCCTaGTGGATTGGCCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSWRPRS*WIGLVV
Trigger: CACCACCAGGCCAATCCAGCAGGACCTGGGCCGCCA...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGATGGCGGCCCAGGTCCTaGTGGATTGGCCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRWRPRS*WIGLVV
Trigger: CACCACCAGGCCAATCCAGCAGGACCTGGGCCGCCA...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAGATTGTTGGGCGTCCTaGGGCTGGCAGCGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQDCWAS*GWQRSG
Trigger: CCCAGAACGCTGCCAGCCGCAGGACGCCCAACAATC...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAACACATTGTTGCGGGGTaGGTTGGGCTGCACCGGGTC +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQHIVAG*VGLHRV
Trigger: GACCCGGTGCAGCCCAACGCACCCCGCAACAATGTG...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGCATGATCATCATGGCTaGGTAGATCTTACCCACTGT +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRHDHHG*VDLTHC
Trigger: ACAGTGGGTAAGATCTACGCAGCCATGATGATCATG...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCCAGGGTGCAGTCCGTaGCTGGGTACCTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSPGCSP*LGTLGC
Trigger: ACAGCCCAAGGTACCCAGGCACGGACTGCACCCTGG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATTGGGCGTCCTGCGGCTaGCAGCGTTCTGGGGATTGG +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINWASCG*QRSGDW
Trigger: CCAATCCCCAGAACGCTGCCAGCCGCAGGACGCCCA...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGATGGGCGTCCTGCGGCTaGCAGCGTTCTGGGGATTGG +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRWASCG*QRSGDW
Trigger: CCAATCCCCAGAACGCTGCCAGCCGCAGGACGCCCA...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAACTTGGACCACGGTGTaGTTGAGGGGCGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQTWTTV*LRGGQA
Trigger: AGCCTGCCCGCCCCTCAACCACACCGTGGTCCAAGT...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCATCAGGCCTCCTCCTaGGTCCAGCTGAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSHQASS*VQLSGG
Trigger: CCCTCCACTCAGCTGGACCCAGGAGGAGGCCTGATG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAATCTCTTGGGCCCGCTaGGTCACCCAGGACGGGCTC +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSISWAR*VTQDGL
Trigger: GAGCCCGTCCTGGGTGACCCAGCGGGCCCAAGAGAT...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAGGGTGGCCCTCGCTCTaGGCTCCAGGTGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSGWPSL*APGASL
Trigger: AAGACTGGCACCTGGAGCCCAGAGCGAGGGCCACCC...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAAGGCATGTCGATGGGTaGCCCTCGCTCTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQRHVDG*PSLWAP
Trigger: TGGAGCCCAGAGCGAGGGCCACCCATCGACATGCCT...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATCCAGTCGCCGGGCTTTaGGTCCCAGCACAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINPVAGL*VPAQRL
Trigger: CAGCCTCTGTGCTGGGACCCAAAGCCCGGCGACTGG...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGACCGCGTAGTAACCATTaGGCAGCCTGCGGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRPRSNH*AACGRG
Trigger: GCCACGGCCGCAGGCTGCCCAATGGTTACTACGCGG...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCACCGCGTAGTAACCATTaGGCAGCCTGCGGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSPRSNH*AACGRG
Trigger: GCCACGGCCGCAGGCTGCCCAATGGTTACTACGCGG...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGACCTGGCAGTCTTCGCTaGGTTGGGCTGGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRPGSLR*VGLGAA
Trigger: AGCAGCACCCAGCCCAACTCAGCGAAGACTGCCAGG...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCACCTGGCAGTCTTCGCTaGGTTGGGCTGGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSPGSLR*VGLGAA
Trigger: AGCAGCACCCAGCCCAACTCAGCGAAGACTGCCAGG...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGAGTTATTGTGCTCCGTaGTTTGGAATTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRSYCAP*FGIHPR
Trigger: ACGAGGATGAATTCCAAATCACGGAGCACAATAACT...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCTTCATGCCGCCTTCGTaGGCCATCAGGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSFMPPS*AIRPPP
Trigger: AGGAGGAGGCCTGATGGCTCACGAAGGCGGCATGAA...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATGGGCTGGGCTTCCACTaGCGGAACTACTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINGLGFH*RNYCPV
Trigger: GACAGGGCAGTAGTTCCGTCAGTGGAAGCCCAGCCC...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGACACATTGTTGCGGGGTaGGTTGGGCTGCACCGGGTC +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRHIVAG*VGLHRV
Trigger: GACCCGGTGCAGCCCAACGCACCCCGCAACAATGTG...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCTCTCCTCTGGTTCTCTaGTGGGAGGCGGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSSPLVL*WEAGHG
Trigger: TCCATGCCCCGCCTCCCAGCAGAGAACCAGAGGAGA...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCTCTGGCGGACAGGGATaGGGTTGTAGAGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSSGGQG*GCRGPW
Trigger: CCATGGCCCTCTACAACCCCATCCCTGTCCGCCAGA...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCTGTCCCACACGGAGCTaGCGACTCACCCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSCPTRS*RLTLDV
Trigger: GACATCCAGGGTGAGTCGCCAGCTCCGTGTGGGACA...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATGACATTTGGTCCCGTTaGGGCAGGTGCGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINDIWSR*GRCGQA
Trigger: AGCCTGCCCGCACCTGCCCCAACGGGACCAAATGTC...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAGACATTTGGTCCCGTTaGGGCAGGTGCGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRDIWSR*GRCGQA
Trigger: AGCCTGCCCGCACCTGCCCCAACGGGACCAAATGTC...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCGGGACCCCAGAGCCCTaGTTCTCTTTTCTGCGTCGG +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSGTPEP*FSFLRR
Trigger: CCGACGCAGAAAAGAGAACCAGGGCTCTGGGGTCCC...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATCAGCGTTCTGGGGATTaGTGGCCAAGGCGGGACCAG +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINQRSGD*WPRRDQ
Trigger: CTGGTCCCGCCTTGGCCACCAATCCCCAGAACGCTG...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAACTTGGACCACGGTGTaGTTGAGGGGCGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRTWTTV*LRGGQA
Trigger: AGCCTGCCCGCCCCTCAACCACACCGTGGTCCAAGT...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCGGAGGCTCCATGCGCTaGAACATGAGTGGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSGGSMR*NMSGVR
Trigger: CCGGACACCACTCATGTTCCAGCGCATGGAGCCTCC...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAGAGGGAAGGGCATTCTaGCTGGGTCCTCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQEGRAF*LGPPSC
Trigger: ACAGGAGGGAGGACCCAGCCAGAATGCCCTTCCCTC...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAAGGCATGTCGATGGGTaGCCCTCGCTCTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSRHVDG*PSLWAP
Trigger: TGGAGCCCAGAGCGAGGGCCACCCATCGACATGCCT...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGGCATGTCGATGGGTaGCCCTCGCTCTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINRHVDG*PSLWAP
Trigger: TGGAGCCCAGAGCGAGGGCCACCCATCGACATGCCT...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAGTGGTGGTGGTGGTGTaGCCGATGCTTCCGGTCCTT +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQVVVVV*PMLPVL
Trigger: AAGGACCGGAAGCATCGGCCACACCACCACCACCAC...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATTGGTGGTGGTGGTGGTaGTGTGGCCGATGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINWWWWW*CGRCFR
Trigger: CCGGAAGCATCGGCCACACCACCACCACCACCACCA...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGAACAGAAGATTCCAATaGAGTATGGTTCCGTGTCAT +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRNRRFQ*SMVPCH
Trigger: ATGACACGGAACCATACTTCATTGGAATCTTCTGTT...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCCAGCTTGGCACTTTTaGTGCTGGCTCTGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSPAWHF*CWLWRR
Trigger: CCTTCGCCAGAGCCAGCATCAAAAGTGCCAAGCTGG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGACATCCACTGAGTGCTTaGGGACCTGTGGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRHPLSA*GPVASP
Trigger: AGGGCTGGCCACAGGTCCTCAAGCACTCAGTGGATG...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGGAGGAGGCCGATCTaGAGCAGAGGGATCATCGCC +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRRRRPI*SRGIIA
Trigger: GGCGATGATCCCTCTGCTGCAGATCGGCCTCCTCCT...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGCACAGTCATTATTGCTaGTGGAAAAGTGTCGAAGTT +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRHSHYC*WKSVEV
Trigger: AACTTCGACACTTTTCCAGCAGCAATAATGACTGTG...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAATCTCGCTGGTGCGCTaGTCCCACACCGACTTGGTA +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQISLVR*SHTDLV
Trigger: TACCAAGTCGGTGTGGGAGCAGCGCACCAGCGAGAT...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATCCAGCAGGTTCTGCTTaGGCATCTCGCTGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINPAGSA*ASRWCA
Trigger: AGCGCACCAGCGAGATGCGCAAGCAGAACCTGCTGG...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCTTGTTACGGTTCTCCTaGGGGTCCACCACAAGCGGC +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSLLRFS*GSTTSG
Trigger: GCCGCTTGTGGTGGACCCGCAGGAGAACCGTAACAA...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCATCTCCACCGCCATGTaGTCGGGTTTCCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSISTAM*SGFLAV
Trigger: GACTGCCAGGAAACCCGAGCACATGGCGGTGGAGAT...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAGTCCTCCCCGGGGTCTaGCTCCTCTTCCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQVLPGV*LLFLFL
Trigger: AAGAAAGAGGAAGAGGAGGCAGACCCCGGGGAGGAC...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCGTCCTCCCCGGGGTCTaGCTCCTCTTCCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSVLPGV*LLFLFL
Trigger: AAGAAAGAGGAAGAGGAGGCAGACCCCGGGGAGGAC...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCATCGCAGCACATTGTTaGGGGGTGCGTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSIAAHC*GVRWAA
Trigger: TGCAGCCCAACGCACCCCGCAACAATGTGCTGCGAT...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAATCGCAGCACATTGTTaGGGGGTGCGTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQIAAHC*GVRWAA
Trigger: TGCAGCCCAACGCACCCCGCAACAATGTGCTGCGAT...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCACGGGCTCTCCTTCATaGCGCCTTCGTGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSTGSPS*RLREPS
Trigger: TGATGGCTCACGAAGGCGGCATGAAGGAGAGCCCGT...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATTCTCCTCTGGTTCTCTaGTGGGAGGCGGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINSPLVL*WEAGHG
Trigger: TCCATGCCCCGCCTCCCAGCAGAGAACCAGAGGAGA...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGATCTCCTCTGGTTCTCTaGTGGGAGGCGGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRSPLVL*WEAGHG
Trigger: TCCATGCCCCGCCTCCCAGCAGAGAACCAGAGGAGA...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCATCTCCTCTGGTTCTCTaGTGGGAGGCGGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSSPLVL*WEAGHG
Trigger: TCCATGCCCCGCCTCCCAGCAGAGAACCAGAGGAGA...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGATCTGGCGGACAGGGATaGGGTTGTAGAGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRSGGQG*GCRGPW
Trigger: CCATGGCCCTCTACAACCCCATCCCTGTCCGCCAGA...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATTCTGGCGGACAGGGATaGGGTTGTAGAGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINSGGQG*GCRGPW
Trigger: CCATGGCCCTCTACAACCCCATCCCTGTCCGCCAGA...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp AAAAACGTTATTGTTTATCATTTGCAGTGCGCCCGCACTTTACGGGCGCTGCGGTCATCAAAATTAAATTaGCCACCGAACAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: KNVIVYHLQCARTLRALRSSKLN*PPNSCI
Trigger: GATGCAGCTGTTCGGTGGCCAATTTAATTTTGATGA...CCGCAGCGCCCGTAAAGTGCGGGCGCACTGCAAATGATAAACAATAACGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATGGGACCCCAGAGCCCTaGTTCTCTTTTCTGCGTCGG +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINGTPEP*FSFLRR
Trigger: CCGACGCAGAAAAGAGAACCAGGGCTCTGGGGTCCC...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAACCTGCTGGATTGGCCTaGTGGTGGACAAGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQPAGLA*WWTSWD
Trigger: GTCCCAACTTGTCCACCACCAGGCCAATCCAGCAGG...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAGTGCTTGAGGACCTGTaGCCAGCCCTCTCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRVLEDL*PALSCG
Trigger: TCCACAGGAGAGGGCTGGCCACAGGTCCTCAAGCAC...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAGAAGGGCATTCTGGCTaGGTCCTCCCTCCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQEGHSG*VLPPVL
Trigger: CAACACAGGAGGGAGGACCCAGCCAGAATGCCCTTC...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATGAGGGAAGGGCATTCTaGCTGGGTCCTCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINEGRAF*LGPPSC
Trigger: ACAGGAGGGAGGACCCAGCCAGAATGCCCTTCCCTC...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAGAGGTCATTTCCACGTaGCCGGCCCCTTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSEVIST*PAPSPL
Trigger: CAGAGGAGAAGGGGCCGGCCACGTGGAAATGACCTC...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATGAGGTCATTTCCACGTaGCCGGCCCCTTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINEVIST*PAPSPL
Trigger: CAGAGGAGAAGGGGCCGGCCACGTGGAAATGACCTC...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAGTGGTGGTGGTGGTGTaGCCGATGCTTCCGGTCCTT +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSVVVVV*PMLPVL
Trigger: AAGGACCGGAAGCATCGGCCACACCACCACCACCAC...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAAGATGACATCCCGGTaGTCCACCACGCCACCACGC +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRKMTSR*STTPPR
Trigger: GCGTGGTGGCGTGGTGGACCACCGGGATGTCATCTT...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCACGGCCTCCTCAGGGTTaGGCAGGTCTGTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSRPPQG*AGLSCF
Trigger: AAAGCAAGACAGACCTGCTCAACCCTGAGGAGGCCG...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGACGGCCTCCTCAGGGTTaGGCAGGTCTGTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRRPPQG*AGLSCF
Trigger: AAAGCAAGACAGACCTGCTCAACCCTGAGGAGGCCG...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATCCAGCTTGGCACTTTTaGTGCTGGCTCTGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINPAWHF*CWLWRR
Trigger: CCTTCGCCAGAGCCAGCATCAAAAGTGCCAAGCTGG...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGATGGTGGTGGAGAGGATaGACATGGAGCTGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRWWWRG*TWSCRA
Trigger: CGCCCTACAGCTCCATGTTCATCCTCTCCACCACCA...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCTCCGGAAGAGAAGCATaGGCGCTTGGAAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSSGREA*ALGRRS
Trigger: GGACCTTCTTCCAAGCGCTCATGCTTCTCTTCCGGA...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAACTGTGCAGGAGCTCATaGCTGAGGGGAGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQLCRSS*LRGESM
Trigger: CATGCTTTCTCCCCTCAGTCATGAGCTCCTGCACAG...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCATCCGCTCATCTGCTGTaGCCACGGGACATGCAGAGT +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSSAHLL*PRDMQS
Trigger: ACTCTGCATGTCCCGTGGTCACAGCAGATGAGCGGA...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATTTGTTACGGTTCTCCTaGGGGTCCACCACAAGCGGC +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINLLRFS*GSTTSG
Trigger: GCCGCTTGTGGTGGACCCGCAGGAGAACCGTAACAA...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAATCTCCACCGCCATGTaGTCGGGTTTCCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRISTAM*SGFLAV
Trigger: GACTGCCAGGAAACCCGAGCACATGGCGGTGGAGAT...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAATCTCCACCGCCATGTaGTCGGGTTTCCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSISTAM*SGFLAV
Trigger: GACTGCCAGGAAACCCGAGCACATGGCGGTGGAGAT...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCCTTGGACTCGTCCGTaGAGTGGAAGAACTTGCCCT +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSPWTRP*SGRTCP
Trigger: AGGGCAAGTTCTTCCACTGCACGGACGAGTCCAAGG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATCCTCTCGCATGGCCTaGAGTTTCTTGGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQSSRMA*SFLALL
Trigger: GAGCAAGGCCAAGAAACTGCAGGCCATGCGAGAGGA...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGGCTTCCGCTCATCTaGTGTGACCACGGGACATGC +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRRLPLI*CDHGTC
Trigger: GCATGTCCCGTGGTCACAGCAGATGAGCGGAAGCCT...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCGGATTGGCCTGGTGGTaGACAAGTTGGGACCAGACA +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSGLAWW*TSWDQT
Trigger: TGTCTGGTCCCAACTTGTCCACCACCAGGCCAATCC...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCAGGTCCTGCTGGATTaGCCTGGTGGTGGACAAGTT +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSQVLLD*PGGGQV
Trigger: AACTTGTCCACCACCAGGCCAATCCAGCAGGACCTG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAGGTGTACTCAAAGGGTaGGGACACGACGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQGVLKG*GHDELP
Trigger: TGGCAGTTCGTCGTGTCCCCACCCTTTGAGTACACC...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCGGTGTACTCAAAGGGTaGGGACACGACGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSGVLKG*GHDELP
Trigger: TGGCAGTTCGTCGTGTCCCCACCCTTTGAGTACACC...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAGCGCTGGAACATGAGTaGTGTCCGGTTCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSALEHE*CPVLLL
Trigger: GAGGAGCAGAACCGGACACCACTCATGTTCCAGCGC...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATCAGGTGCCAGTCTTCTaGAACATCTCTTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINQVPVF*NISWAR
Trigger: GCGGGCCCAAGAGATGTTCCAGAAGACTGGCACCTG...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCGCATCTCCACAGACTaGGAGTTGGGCTGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSRISTD*ELGWLL
Trigger: TAACAGCCAGCCCAACTCCCAGTCTGTGGAGATGCG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAAGGCTGAGCGCTTCATaGGGCTGGTATCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQRLSAS*GWYQRW
Trigger: CCATCTCTGATACCAGCCCCATGAAGCGCTCAGCCT...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGATCCCGGCGACGTTGGTaGTACCGTTGGTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRSRRRW*YRWFSS
Trigger: TGAGGAGAACCAACGGTACCACCAACGTCGCCGGGA...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAGGTCACCCGATTGGGTaGTCATGCTCAGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQGHPIG*SCSDLS
Trigger: GGACAGATCTGAGCATGACCACCCAATCGGGTGACC...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCGGCAGGTCACCCGATTaGGTGGTCATGCTCAGATCT +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSGRSPD*VVMLRS
Trigger: AGATCTGAGCATGACCACCCAATCGGGTGACCTGCC...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAGGCAGGTCACCCGATTaGGTGGTCATGCTCAGATCT +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQGRSPD*VVMLRS
Trigger: AGATCTGAGCATGACCACCCAATCGGGTGACCTGCC...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCCACGACAAAGTCCATaGCGTTCCAGCCATTCCTCA +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSPRQSP*RSSHSS
Trigger: TGAGGAATGGCTGGAACGTCATGGACTTTGTCGTGG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCTGTTGTCGAACTGAGTaGTGCCGTTGTTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSCCRTE*CRCWAL
Trigger: AAGGGCCCAACAACGGCATCACTCAGTTCGACAACA...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAAGGATGTTGTCGAACTaGGTGATGCCGTTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQRMLSN*VMPLLG
Trigger: GCCCAACAACGGCATCACTCAGTTCGACAACATCCT...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCAGAAGGCCTGAGTTTTaGCCATGCGGCGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSRRPEF*PCGGCR
Trigger: TCTACATCCGCCGCATGGTCAAAACTCAGGCCTTCT...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAACATAAGGTAGGGCCTTaGAGGACTGCACGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQHKVGP*RTARKS
Trigger: GGACTTTCGTGCAGTCCTTCAAGGCCCTACCTTATG...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGATCCGGAAGAGAAGCATaGGCGCTTGGAAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRSGREA*ALGRRS
Trigger: GGACCTTCTTCCAAGCGCTCATGCTTCTCTTCCGGA...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAAGATCCAGGGTCTTCTaGGACAGGTTGGGCCAAATG +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQRSRVF*DRLGQM
Trigger: CATTTGGCCCAACCTGTCTCAGAAGACCCTGGATCT...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATGCTCCATCAAAAGGGTaGCTCTGCTCCACGTCTGTC +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINAPSKG*LCSTSV
Trigger: GACAGACGTGGAGCAGAGGCACCCTTTTGATGGAGC...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCATTGCCCTTGAAGAGCTaGACGGCTACCACAGCGAAG +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSLPLKS*TATTAK
Trigger: CTTCGCTGTGGTAGCCGTGCAGCTCTTCAAGGGCAA...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGATTGCCCTTGAAGAGCTaGACGGCTACCACAGCGAAG +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRLPLKS*TATTAK
Trigger: CTTCGCTGTGGTAGCCGTGCAGCTCTTCAAGGGCAA...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCACCTTGGACTCGTCCGTaGAGTGGAAGAACTTGCCCT +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSPWTRP*SGRTCP
Trigger: AGGGCAAGTTCTTCCACTGCACGGACGAGTCCAAGG...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAGTAGCATCCACTGAGTaGTTGAGGACCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRVASTE*LRTCGQ
Trigger: CTGGCCACAGGTCCTCAAGCACTCAGTGGATGCTAC...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATGAGAGCATGATGTTGTaGCACGCTTCTCCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINESMML*HASPVA
Trigger: CGCCACAGGAGAAGCGTGGCACAACATCATGCTCTC...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAGAGAGCATGATGTTGTaGCACGCTTCTCCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSESMML*HASPVA
Trigger: CGCCACAGGAGAAGCGTGGCACAACATCATGCTCTC...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCAGCAGGGTCATACTCTaGCCAGACACGCACGTATTC +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSSRVIL*PDTHVF
Trigger: GAATACGTGCGTGTCTGGGCAGAGTATGACCCTGCT...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCATCCTCTCGCATGGCCTaGAGTTTCTTGGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSSSRMA*SFLALL
Trigger: GAGCAAGGCCAAGAAACTGCAGGCCATGCGAGAGGA...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATTCCTCTCGCATGGCCTaGAGTTTCTTGGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINSSRMA*SFLALL
Trigger: GAGCAAGGCCAAGAAACTGCAGGCCATGCGAGAGGA...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCCGATTGGGTGGTCATaGTCAGATCTGTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSPIGWS*SDLSPN
Trigger: GTTTGGGGACAGATCTGAGCATGACCACCCAATCGG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAACCAGCCGCTCAGACATaGGTGTCTTGTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQPAAQT*VSCHHQ
Trigger: CTGATGATGACAAGACACCCATGTCTGAGCGGCTGG...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCCAGCCGCTCAGACATaGGTGTCTTGTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSPAAQT*VSCHHQ
Trigger: CTGATGATGACAAGACACCCATGTCTGAGCGGCTGG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAGGATTGGCCTGGTGGTaGACAAGTTGGGACCAGACA +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSGLAWW*TSWDQT
Trigger: TGTCTGGTCCCAACTTGTCCACCACCAGGCCAATCC...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATCAGGTCCTGCTGGATTaGCCTGGTGGTGGACAAGTT +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINQVLLD*PGGGQV
Trigger: AACTTGTCCACCACCAGGCCAATCCAGCAGGACCTG...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCATGTGCTCGGGTTTCCTaGCAGTCTTCGCTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSCARVS*QSSLSW
Trigger: CCAACTCAGCGAAGACTGCCAGGAAACCCGAGCACA...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGACTCTCTCGAACTCCTTaGACTCGTCCGTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRLSRTP*TRPCSG
Trigger: TCCACTGCACGGACGAGTCCAAGGAGTTCGAGAGAG...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCACGCATCTCCACAGACTaGGAGTTGGGCTGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSRISTD*ELGWLL
Trigger: TAACAGCCAGCCCAACTCCCAGTCTGTGGAGATGCG...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGATGGTCTGGCCTTCCATaGGGAGGTAGTGTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRWSGLP*GGSVRC
Trigger: ACAGCGAACACTACCTCCCCATGGAAGGCCAGACCA...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGGCTGAGCGCTTCATaGGGCTGGTATCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRRLSAS*GWYQRW
Trigger: CCATCTCTGATACCAGCCCCATGAAGCGCTCAGCCT...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAGGTCACCCGATTGGGTaGTCATGCTCAGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSGHPIG*SCSDLS
Trigger: GGACAGATCTGAGCATGACCACCCAATCGGGTGACC...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAGGCAGGTCACCCGATTaGGTGGTCATGCTCAGATCT +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSGRSPD*VVMLRS
Trigger: AGATCTGAGCATGACCACCCAATCGGGTGACCTGCC...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATTGTTGTCGAACTGAGTaGTGCCGTTGTTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINCCRTE*CRCWAL
Trigger: AAGGGCCCAACAACGGCATCACTCAGTTCGACAACA...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAGCTTTGGCAGCCGCTTaGTGGTCTTTAGAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRALAAA*WSLEVV
Trigger: TACGACCTCTAAAGACCATCAAGCGGCTGCCAAAGC...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAGCTTTGGCAGCCGCTTaGTGGTCTTTAGAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSALAAA*WSLEVV
Trigger: TACGACCTCTAAAGACCATCAAGCGGCTGCCAAAGC...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCAAAAGTAGCATCCACTaGGTGCTTGAGGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSKSSIH*VLEDLW
Trigger: CCACAGGTCCTCAAGCACTCAGTGGATGCTACTTTT...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAACACCCTTGGCAATTTTaGTATCAAGGGCGGTTCGGA +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQHPWQF*YQGRFG
Trigger: TCCGAACCGCCCTTGATATCAAAATTGCCAAGGGTG...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCAGCTTCTGATTGGCTaGCTCTTCCTCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSQLLIG*LFLFLL
Trigger: GAGCAAGAAGAGGAAGAGGCAGCCAATCAGAAGCTG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCACAGGGGACTCACTTCTaGTACCTCCTTGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSQGTHF*YLLGFL
Trigger: CAGAAAGCCAAGGAGGTAGCAGAAGTGAGTCCCCTG...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGACAGGGGACTCACTTCTaGTACCTCCTTGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRQGTHF*YLLGFL
Trigger: CAGAAAGCCAAGGAGGTAGCAGAAGTGAGTCCCCTG...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATCAGGGGACTCACTTCTaGTACCTCCTTGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINQGTHF*YLLGFL
Trigger: CAGAAAGCCAAGGAGGTAGCAGAAGTGAGTCCCCTG...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCTATGGACATGTTGGCTaGAGACAGGGGACTCACTTC +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSYGHVG*RQGTHF
Trigger: GAAGTGAGTCCCCTGTCTGCAGCCAACATGTCCATA...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAAGTCCAGAGGAGAATaGGGATGGTGTAACCCTGGC +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRKSRGE*GWCNPG
Trigger: GCCAGGGTTACACCATCCGCATTCTCCTCTGGACTT...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAAGGGCCTTGAAGGACTaGACGAAAGTCCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSRALKD*TKVQRR
Trigger: TCTCCTCTGGACTTTCGTGCAGTCCTTCAAGGCCCT...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAAGCAGGGTCATACTCTaGCCAGACACGCACGTATTC +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSSRVIL*PDTHVF
Trigger: GAATACGTGCGTGTCTGGGCAGAGTATGACCCTGCT...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATTATGAGGACATTTCTTaGCTAAGCCGAGAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINYEDIS*LSREGA
Trigger: CGCCCCCTCTCGGCTTAGGCAAGAAATGTCCTCATA...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAAACTGTGTTGTCATCTaGTACCGGCAGGTCCATCCG +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSNCVVI*YRQVHP
Trigger: CGGATGGACCTGCCGGTAGCAGATGACAACACAGTT...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAACTGTGTTGTCATCTaGTACCGGCAGGTCCATCCG +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINNCVVI*YRQVHP
Trigger: CGGATGGACCTGCCGGTAGCAGATGACAACACAGTT...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCATCTGCATCCATCTGCTaGTTGTCAGCTCCACCCTTG +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSSASIC*LSAPPL
Trigger: CAAGGGTGGAGCTGACAAGCAGCAGATGGATGCAGA...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCTGGCCATCATCTCCTTaGGAAGCTCTGCATCCATCT +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSWPSSP*EALHPS
Trigger: AGATGGATGCAGAGCTTCGCAAGGAGATGATGGCCA...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGAGCATCAAAAGGGTaGCTCTGCTCCACGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRRASKG*LCSTSV
Trigger: GACAGACGTGGAGCAGAGGCACCCTTTTGATGCTCT...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215756.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAAAGTGTCGAAGTTGGTaGGCGGAGTCCCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSKCRSW*AESPHQ
Trigger: TTGATGAGGGGACTCCGCCCACCAACTTCGACACTT...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATGCTCCTTCACGGCTATaGACATGTTGGCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINAPSRL*TCWLQT
Trigger: TGTCTGCAGCCAACATGTCCATAGCCGTGAAGGAGC...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAGCGCACGGCTCTTGTTaGTGTTGTTGTTACGGTTCT +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQAHGSC*CCCYGS
Trigger: AGAACCGTAACAACAACACCAACAAGAGCCGTGCGC...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATCTCTTCCTCTTTCTTTaGCAGTGGGTCTGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINLFLFL*QWVWVG
Trigger: GCCAACCCAGACCCACTGCCAAAGAAAGAGGAAGAG...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCACTCTTCCTCTTTCTTTaGCAGTGGGTCTGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSLFLFL*QWVWVG
Trigger: GCCAACCCAGACCCACTGCCAAAGAAAGAGGAAGAG...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATGACTCGTCCGTGCAGTaGAAGAACTTGCCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINDSSVQ*KNLPLK
Trigger: CTTCAAGGGCAAGTTCTTCCACTGCACGGACGAGTC...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCATGGCCTGCAGTTTCTTaGCCTTGCTCTGCCGGTAAT +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSWPAVS*PCSAGN
Trigger: ATTACCGGCAGAGCAAGGCCAAGAAACTGCAGGCCA...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGATGGCCTGCAGTTTCTTaGCCTTGCTCTGCCGGTAAT +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRWPAVS*PCSAGN
Trigger: ATTACCGGCAGAGCAAGGCCAAGAAACTGCAGGCCA...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCACCTCTTCTGCTTTTaGGATCCACTCCATGTATCC +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSHLFCF*DPLHVS
Trigger: GGATACATGGAGTGGATCTCAAAAGCAGAAGAGGTG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAGAGCTCGTAACACACTaGTTCCAAAGGATGTACCAG +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQELVTH*FQRMYQ
Trigger: CTGGTACATCCTTTGGAATCAGTGTGTTACGAGCTC...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAAGACAACCAGGTTTCTaGGAGATGCCCAGTACTTTG +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQRQPGF*EMPSTL
Trigger: CAAAGTACTGGGCATCTCTCAGAAACCTGGTTGTCT...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAAAAGTAGCATCCACTaGGTGCTTGAGGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRKSSIH*VLEDLW
Trigger: CCACAGGTCCTCAAGCACTCAGTGGATGCTACTTTT...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAAGGGTGGAGTTGAAGTaGACTGTGTTGTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQRVELK*TVLSSA
Trigger: AGCAGATGACAACACAGTTCACTTCAACTCCACCCT...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCCATCAGGGTGGAGTTaGAGTGAACTGTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSPSGWS*SELCCH
Trigger: ATGACAACACAGTTCACTTCAACTCCACCCTGATGG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATCACCCTTGGCAATTTTaGTATCAAGGGCGGTTCGGA +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINHPWQF*YQGRFG
Trigger: TCCGAACCGCCCTTGATATCAAAATTGCCAAGGGTG...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAGCCGGTAATACTCCATaGTCATCATGGCTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRAGNTP*SSWLRR
Trigger: TCTACGCAGCCATGATGATCATGGAGTATTACCGGC...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATGTAGTGTTCGCTGTCTaGGTAGCCATCAGTACCCAT +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINVVFAV*VAISTH
Trigger: ATGGGTACTGATGGCTACTCAGACAGCGAACACTAC...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAGTAGTGTTCGCTGTCTaGGTAGCCATCAGTACCCAT +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSVVFAV*VAISTH
Trigger: ATGGGTACTGATGGCTACTCAGACAGCGAACACTAC...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGATATGGACATGTTGGCTaGAGACAGGGGACTCACTTC +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRYGHVG*RQGTHF
Trigger: GAAGTGAGTCCCCTGTCTGCAGCCAACATGTCCATA...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCACACGTTCCCTTTCTTTaGCAAACTCCCCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSHVPFL*QTPQTA
Trigger: TGCTGTCTGGGGAGTTTGCCAAAGAAAGGGAACGTG...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGACACGTTCCCTTTCTTTaGCAAACTCCCCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRHVPFL*QTPQTA
Trigger: TGCTGTCTGGGGAGTTTGCCAAAGAAAGGGAACGTG...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGACTTCTGCTACCTCCTTaGCTTTCTGTAGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRLLLPP*LSVEPA
Trigger: AGCTGGCTCTACAGAAAGCCAAGGAGGTAGCAGAAG...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAGCGCACGGCTCTTGTTaGTGTTGTTGTTACGGTTCT +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRAHGSC*CCCYGS
Trigger: AGAACCGTAACAACAACACCAACAAGAGCCGTGCGC...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCCTCTTTCTTTGGCAGTaGGTCTGGGTTGGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSLFLWQ*VWVGVF
Trigger: AAAAACGCCAACCCAGACCCACTGCCAAAGAAAGAG...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATACAGGTTGGGCCAAATaGCCATCATCTCCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINTGWAK*PSSPCE
Trigger: TTCGCAAGGAGATGATGGCCATTTGGCCCAACCTGT...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATCTTCTGAGACAGGTTaGGCCAAATGGCCATCATCT +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQSSETG*AKWPSS
Trigger: AGATGATGGCCATTTGGCCCAACCTGTCTCAGAAGA...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAAGGGAGGCCATTCAGTaGTCTTTTTGGCGTATTTTC +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQREAIQ*SFWRIF
Trigger: GAAAATACGCCAAAAAGATCACTGAATGGCCTCCCT...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAGGATCATCGCCTTCATaGTTGACTTCAGGACGACTT +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRGSSPS*LTSGRL
Trigger: AAGTCGTCCTGAAGTCAATCATGAAGGCGATGATCC...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCACTCCATGTATCCATTaGGCTCACGTTCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSTPCIH*AHVQSA
Trigger: AGCAGATTGAACGTGAGCTCAATGGATACATGGAGT...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAGAGCTCGTAACACACTaGTTCCAAAGGATGTACCAG +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRELVTH*FQRMYQ
Trigger: CTGGTACATCCTTTGGAATCAGTGTGTTACGAGCTC...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATTGCAAGCAACCCTATaGGGACATTTCTTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQLQATL*GHFLPK
Trigger: CTTAGGCAAGAAATGTCCTCATAGGGTTGCTTGCAA...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GGTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAAAGCTCACGTTCAATCTaGTGTTGTCTTCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GFIHRENERFNRDDKTHQSSRSI*CCLLSF
Trigger: GAAGCTCAGAAGACAACAGCAGATTGAACGTGAGCT...TTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAGATTCCAATGAAGTATaGTTCCGTGTCATCCAGCCG +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSDSNEV*FRVIQP
Trigger: CGGCTGGATGACACGGAACCATACTTCATTGGAATC...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATGATTCCAATGAAGTATaGTTCCGTGTCATCCAGCCG +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINDSNEV*FRVIQP
Trigger: CGGCTGGATGACACGGAACCATACTTCATTGGAATC...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAGCGTTTTTGTTTACTTaGACCACGGTGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSAFLFT*TTVWLR
Trigger: CCTCAACCACACCGTGGTCCAAGTAAACAAAAACGC...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATCTTTGGCAGTGGGTCTaGGTTGGCGTTTTTGTTTAC +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINLWQWV*VGVFVY
Trigger: GTAAACAAAAACGCCAACCCAGACCCACTGCCAAAG...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATCTCTTTCTTTGGCAGTaGGTCTGGGTTGGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINLFLWQ*VWVGVF
Trigger: AAAAACGCCAACCCAGACCCACTGCCAAAGAAAGAG...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGATGCCACATTCGATACTaGAAGCTCTGCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRCHIRY*KLCLFW
Trigger: CCAGAACAAGCAGAGCTTCCAGTATCGAATGTGGCA...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGAAGCATGAGCGCTTaGAAGAAGGTCCGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRRSMSA*KKVRKL
Trigger: TAACTTCCGGACCTTCTTCCAAGCGCTCATGCTTCT...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATTTGCAAGCAACCCTATaGGGACATTTCTTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINLQATL*GHFLPK
Trigger: CTTAGGCAAGAAATGTCCTCATAGGGTTGCTTGCAA...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCTCACGTTCAATCTaGTGTTGTCTTCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRSSRSI*CCLLSF
Trigger: GAAGCTCAGAAGACAACAGCAGATTGAACGTGAGCT...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCGTCCGGAAGTTATTGTaGTCCGTGATTTGGAATTCA +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSVRKLL*SVIWNS
Trigger: TGAATTCCAAATCACGGAGCACAATAACTTCCGGAC...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATCATGATCATCATGGCTaGGTAGATCTTACCCACTGT +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINHDHHG*VDLTHC
Trigger: ACAGTGGGTAAGATCTACGCAGCCATGATGATCATG...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCGATTCCAATGAAGTATaGTTCCGTGTCATCCACGTT +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSDSNEV*FRVIHV
Trigger: AACGTGGATGACACGGAACCATACTTCATTGGAATC...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000122053.2
CDS-3UTR TCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGTTATTGTGCTCCGTaGTTTGGAATTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRSYCAP*FGIHPR
Trigger: ACGAGGATGAATTCCAAATCACGGAGCACAATAACT...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGTTATTGTGCTCCGTaGTTTGGAATTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINSYCAP*FGIHPR
Trigger: ACGAGGATGAATTCCAAATCACGGAGCACAATAACT...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp GTTTCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATGTCCGGAAGTTATTGTaGTCCGTGATTTGGAATTCA +
Preference number: 4 (lower is better)
Translates to: VSFTGKTKDSIEMIKLINVRKLL*SVIWNS
Trigger: TGAATTCCAAATCACGGAGCACAATAACTTCCGGAC...ATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCAGTCATTATTGCTGCTaGAAAAGTGTCGAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSSHYCC*KSVEVG
Trigger: ACCAACTTCGACACTTTTCCAGCAGCAATAATGACT...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGCAGAGTCCTAAGAAAATaGATTCTGCATAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: FTGKTKDSIEMIKLINRSRVLRK*ILHSRG
Trigger: TCCTCTACTATGCAGAATTCATTTTCTTAGGACTCT...GCTTCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGACACAGTCATTATTGCTaGTGGAAAAGTGTCGAAGTT +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRHSHYC*WKSVEV
Trigger: AACTTCGACACTTTTCCAGCAGCAATAATGACTGTG...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR GCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCACACAGTCATTATTGCTaGTGGAAAAGTGTCGAAGTT +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSHSHYC*WKSVEV
Trigger: AACTTCGACACTTTTCCAGCAGCAATAATGACTGTG...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCACCTCTTCAAAGCAGGTaGTATGAAATTTCCCCATAT +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSPLQSR*YEISPY
Trigger: ATATGGGGAAATTTCATACCACCTGCTTTGAAGAGG...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCATCATCAAAATTAAATTaGCCACCGAACAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSSSKLN*PPNSCI
Trigger: GATGCAGCTGTTCGGTGGCCAATTTAATTTTGATGA...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CCA 90 bp TTTGTTCTTTTTAATGTCATGCAATATTTCACAGTCCCAAGCCCACGTTTTTCAAGTCATTATTGCTGCTaGAAAAGTGTCGAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: FVLFNVMQYFTVPSPRFSSHYCC*KSVEVG
Trigger: ACCAACTTCGACACTTTTCCAGCAGCAATAATGACT...TGAAAAACGTGGGCTTGGGACTGTGAAATATTGCATGACATTAAAAAGAACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000121390.8
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR TCA 90 bp TCATTCACCGGGAAAACGAAAGATTCAATCGAGATGATAAAACTCATCAATAGAAGAGTCCTAAGAAAATaGATTCTGCATAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SFTGKTKDSIEMIKLINRRVLRK*ILHSRG
Trigger: TCCTCTACTATGCAGAATTCATTTTCTTAGGACTCT...TCTATTGATGAGTTTTATCATCTCGATTGAATCTTTCGTTTTCCCGGTGAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS GCA 90 bp TGTGTCGTGTGCTCCCGACCTTCGCTGGGCGAGCGGGACCAGCGCTaGTCCCGGGCCCGCGCCCGGCCGGTGTCCGGCCGCTCCTGTGCG +
Preference number: 5 (lower is better)
Translates to: CVVCSRPSLGERDQR*SRARARPVSGRSCA
Trigger: CGCACAGGAGCGGCCGGACACCGGCCGGGCGCGGGCCCGGGAGCAGCGCTGGTCCCGCTCGCCCAGCGAAGGTCGGGAGCACACGACACA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp TTCGCCGTCTGCAGCGCGGGCCGGCCTAGTGGCGTCGCGGGGACGTaGCCTGCGCTCTGGCCTGTCGTCGGGTTCGTCCCCGGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: FAVCSAGRPSGVAGT*PALWPVVGFVPGPA
Trigger: CGCCGGCCCGGGGACGAACCCGACGACAGGCCAGAGCGCAGGCCACGTCCCCGCGACGCCACTAGGCCGGCCCGCGCTGCAGACGGCGAA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS GCA 90 bp GCGCTGCTCCCGGGCCCGCGCCCGGCCGGTGTCCGGCCGCTCCTGTaGGTAGCGATCCCGGTCGGGGGCCGGGGGATGATGATGATGGTG +
Preference number: 5 (lower is better)
Translates to: ALLPGPRPAGVRPLL*VAIPVGGRGMMMMV
Trigger: CACCATCATCATCATCCCCCGGCCCCCGACCGGGATCGCTACGCACAGGAGCGGCCGGACACCGGCCGGGCGCGGGCCCGGGAGCAGCGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS GCA 90 bp CGTCCTCGCTCTCGCTGTACGCGTCGTGCGCGCCCCTGCGGGCTGTaGGCGGCCGCGGCGCGCCGTGCCCCGCGTAGTAACCATTGGGCA +
Preference number: 5 (lower is better)
Translates to: RPRSRCTRRARPCGL*AAAARRAPRSNHWA
Trigger: TGCCCAATGGTTACTACGCGGGGCACGGCGCGCCGCGGCCGCGCACAGCCCGCAGGGGCGCGCACGACGCGTACAGCGAGAGCGAGGACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp CCAAGTGAGTCTTCACGTCGGGCCGCAGCGGGCGCGCGTAGGGGGTaGGCCAGCGCTCAGCCGCGTCCCCGTACAGCGCCTCGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: PSESSRRAAAGARRG*ASAQPRPRTAPRGW
Trigger: CCAGCCGCGAGGCGCTGTACGGGGACGCGGCTGAGCGCTGGCCCACCCCCTACGCGCGCCCGCTGCGGCCCGACGTGAAGACTCACTTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS CCA 90 bp CGGAACTACTGCCCTGTCTGTGTGTCGTGTGCTCCCGACCTTCGCTaGGCGAGCGGGACCAGCGCTGCTCCCGGGCCCGCGCCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: RNYCPVCVSCAPDLR*ASGTSAAPGPAPGR
Trigger: CCGGCCGGGCGCGGGCCCGGGAGCAGCGCTGGTCCCGCTCGCCCAGCGAAGGTCGGGAGCACACGACACACAGACAGGGCAGTAGTTCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp GGGTGGGCCAGCGCTCAGCCGCGTCCCCGTACAGCGCCTCGCGGCTaGCCAGCAGGTTCTGCTTGCGCATCTCGCTGGTGCGCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: GWASAQPRPRTAPRG*PAGSACASRWCAAP
Trigger: GGGAGCAGCGCACCAGCGAGATGCGCAAGCAGAACCTGCTGGCCAGCCGCGAGGCGCTGTACGGGGACGCGGCTGAGCGCTGGCCCACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS CCA 90 bp GCGGCGGCCGCGCCGCGGCGTGCTGGTGCCGGACGTAGAGGGGGCTaGGCTTCCACTGACGGAACTACTGCCCTGTCTGTGTGTCGTGTG +
Preference number: 5 (lower is better)
Translates to: AAAAPRRAGAGRRGG*ASTDGTTALSVCRV
Trigger: CACACGACACACAGACAGGGCAGTAGTTCCGTCAGTGGAAGCCCAGCCCCCTCTACGTCCGGCACCAGCACGCCGCGGCGCGGCCGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp GTCGCGCGCGCTTTCGCGGGGCCGCGCGGTCGGGCGCAGCGCTTCTaGCGCACGGCTCTTGTTGGTGTTGTTGTTACGGTTCTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: VARAFAGPRGRAQRF*RTALVGVVVTVLLR
Trigger: CCGCAGGAGAACCGTAACAACAACACCAACAAGAGCCGTGCGCCAGAAGCGCTGCGCCCGACCGCGCGGCCCCGCGAAAGCGCGCGCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS CCA 90 bp GGCCGGGGTTGGACGGGTTGCCCGGATTGTTGGGCGTCCTGCGGCTaGCAGCGTTCTGGGGATTGGTGGCCAAGGCGGGACCAGGGTTGG +
Preference number: 5 (lower is better)
Translates to: GRGWTGCPDCWASCG*QRSGDWWPRRDQGW
Trigger: CCAACCCTGGTCCCGCCTTGGCCACCAATCCCCAGAACGCTGCCAGCCGCAGGACGCCCAACAATCCGGGCAACCCGTCCAACCCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGAGGGCGGCATGGGCTTaGGGCCGTCCTCCCCGGGGT +
Preference number: 5 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRRAAWA*GRPPRG
Trigger: ACCCCGGGGAGGACGGCCCAAAGCCCATGCCGCCCT...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS CCA 90 bp GGGGCCGCGCGGTCGGGCGCAGCGCTTCTGGCGCACGGCTCTTGTTaGTGTTGTTGTTACGGTTCTCCTGCGGGTCCACCACAAGCGGCC +
Preference number: 5 (lower is better)
Translates to: GAARSGAALLAHGSC*CCCYGSPAGPPQAA
Trigger: GGCCGCTTGTGGTGGACCCGCAGGAGAACCGTAACAACAACACCAACAAGAGCCGTGCGCCAGAAGCGCTGCGCCCGACCGCGCGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS CCA 90 bp CCAGCGGCAGGTCCTGGCGGCCCAGGTCCTGCTGGATTGGCCTGGTaGTGGACAAGTTGGGACCAGACACGGGGACCCCAGAGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: PAAGPGGPGPAGLAW*WTSWDQTRGPQSPG
Trigger: ACCAGGGCTCTGGGGTCCCCGTGTCTGGTCCCAACTTGTCCACCACCAGGCCAATCCAGCAGGACCTGGGCCGCCAGGACCTGCCGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS CCA 90 bp CAGCCAGCGGCAGGTCCTGGCGGCCCAGGTCCTGCTGGATTGGCCTaGTGGTGGACAAGTTGGGACCAGACACGGGGACCCCAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: QPAAGPGGPGPAGLA*WWTSWDQTRGPQSP
Trigger: AGGGCTCTGGGGTCCCCGTGTCTGGTCCCAACTTGTCCACCACCAGGCCAATCCAGCAGGACCTGGGCCGCCAGGACCTGCCGCTGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAAGGGCGGCATGGGCTTaGGGCCGTCCTCCCCGGGGT +
Preference number: 5 (lower is better)
Translates to: FGVARKHSRGSEKCVGRARAAWA*GRPPRG
Trigger: ACCCCGGGGAGGACGGCCCAAAGCCCATGCCGCCCT...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCGATGCTTCCGGTCCTaGGGTCGGCCCCGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRRCFRS*GRPRSW
Trigger: CCAGGACCGGGGCCGACCCAAGGACCGGAAGCATCG...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp GCGGCAGGTCCTGGCGGCCCAGGTCCTGCTGGATTGGCCTGGTGGTaGACAAGTTGGGACCAGACACGGGGACCCCAGAGCCCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: AAGPGGPGPAGLAWW*TSWDQTRGPQSPGS
Trigger: AGAACCAGGGCTCTGGGGTCCCCGTGTCTGGTCCCAACTTGTCCACCACCAGGCCAATCCAGCAGGACCTGGGCCGCCAGGACCTGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS CCA 90 bp GACGGGTTGCCCGGATTGTTGGGCGTCCTGCGGCTGGCAGCGTTCTaGGGATTGGTGGCCAAGGCGGGACCAGGGTTGGTGCTGTTCCCG +
Preference number: 5 (lower is better)
Translates to: DGLPGLLGVLRLAAF*GLVAKAGPGLVLFP
Trigger: CGGGAACAGCACCAACCCTGGTCCCGCCTTGGCCACCAATCCCCAGAACGCTGCCAGCCGCAGGACGCCCAACAATCCGGGCAACCCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCGATGCTTCCGGTCCTaGGGTCGGCCCCGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVRCFRS*GRPRSW
Trigger: CCAGGACCGGGGCCGACCCAAGGACCGGAAGCATCG...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCACGATGCTTCCGGTCCTaGGGTCGGCCCCGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: FGVARKHSRGSEKCVGRARCFRS*GRPRSW
Trigger: CCAGGACCGGGGCCGACCCAAGGACCGGAAGCATCG...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS GCA 90 bp TGGGCCCTTCCCAGTACGGCTGACATTTGGTCCCGTTGGGGCAGGTaGGGGCAGGCTCCTCTGTCCCACACGGAGCTGGCGACTCACCCT +
Preference number: 5 (lower is better)
Translates to: WALPSTADIWSRWGR*GQAPLSHTELATHP
Trigger: AGGGTGAGTCGCCAGCTCCGTGTGGGACAGAGGAGCCTGCCCGCACCTGCCCCAACGGGACCAAATGTCAGCCGTACTGGGAAGGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS CCA 90 bp TGCCGTTGTTGGGCCCTTCCCAGTACGGCTGACATTTGGTCCCGTTaGGGCAGGTGCGGGCAGGCTCCTCTGTCCCACACGGAGCTGGCG +
Preference number: 5 (lower is better)
Translates to: CRCWALPSTADIWSR*GRCGQAPLSHTELA
Trigger: CGCCAGCTCCGTGTGGGACAGAGGAGCCTGCCCGCACCTGCCCCAACGGGACCAAATGTCAGCCGTACTGGGAAGGGCCCAACAACGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS CCA 90 bp ATCCTCAGCCAGCGGCAGGTCCTGGCGGCCCAGGTCCTGCTGGATTaGCCTGGTGGTGGACAAGTTGGGACCAGACACGGGGACCCCAGA +
Preference number: 5 (lower is better)
Translates to: ILSQRQVLAAQVLLD*PGGGQVGTRHGDPR
Trigger: TCTGGGGTCCCCGTGTCTGGTCCCAACTTGTCCACCACCAGGCCAATCCAGCAGGACCTGGGCCGCCAGGACCTGCCGCTGGCTGAGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCCGGGGTTGGACGGGTaGCCCGGATTGTTGGGCGTC +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVPGLDG*PGLLGV
Trigger: GACGCCCAACAATCCGGGCAACCCGTCCAACCCCGG...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS GCA 90 bp ACATCTCTTGGGCCCGCTGGGTCACCCAGGACGGGCTCTCCTTCATaGCGCCTTCGTGAGCCATCAGGCCTCCTCCTGGGTCCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: TSLGPAGSPRTGSPS*RLREPSGLLLGPAE
Trigger: CTCAGCTGGACCCAGGAGGAGGCCTGATGGCTCACGAAGGCGGCATGAAGGAGAGCCCGTCCTGGGTGACCCAGCGGGCCCAAGAGATGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp CCCGTTGGGGCAGGTGCGGGCAGGCTCCTCTGTCCCACACGGAGCTaGCGACTCACCCTGGATGTCGTCTGTCCCCTCTTCAAAGCAGGT +
Preference number: 5 (lower is better)
Translates to: PVGAGAGRLLCPTRS*RLTLDVVCPLFKAG
Trigger: ACCTGCTTTGAAGAGGGGACAGACGACATCCAGGGTGAGTCGCCAGCTCCGTGTGGGACAGAGGAGCCTGCCCGCACCTGCCCCAACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS CCA 90 bp CCGGATTGTTGGGCGTCCTGCGGCTGGCAGCGTTCTGGGGATTGGTaGCCAAGGCGGGACCAGGGTTGGTGCTGTTCCCGATTTTGGCGG +
Preference number: 5 (lower is better)
Translates to: PDCWASCGWQRSGDW*PRRDQGWCCSRFWR
Trigger: CCGCCAAAATCGGGAACAGCACCAACCCTGGTCCCGCCTTGGCCACCAATCCCCAGAACGCTGCCAGCCGCAGGACGCCCAACAATCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS CCA 90 bp TGGTGGTGTGGCCGATGCTTCCGGTCCTTGGGTCGGCCCCGGTCCTaGTCCCGATCTTTGGAGGGCAGGTCACCCGATTGGGTGGTCATG +
Preference number: 5 (lower is better)
Translates to: WWCGRCFRSLGRPRS*SRSLEGRSPDWVVM
Trigger: CATGACCACCCAATCGGGTGACCTGCCCTCCAAAGATCGGGACCAGGACCGGGGCCGACCCAAGGACCGGAAGCATCGGCCACACCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp GATGATGGTGGTGGTGGTGGTGGTGTGGCCGATGCTTCCGGTCCTTaGGTCGGCCCCGGTCCTGGTCCCGATCTTTGGAGGGCAGGTCAC +
Preference number: 5 (lower is better)
Translates to: DDGGGGGGVADASGP*VGPGPGPDLWRAGH
Trigger: GTGACCTGCCCTCCAAAGATCGGGACCAGGACCGGGGCCGACCCAAGGACCGGAAGCATCGGCCACACCACCACCACCACCACCATCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCTGGTGGTGGACAAGTaGGGACCAGACACGGGGACC +
Preference number: 5 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSLVVDK*GPDTGT
Trigger: GGTCCCCGTGTCTGGTCCCAACTTGTCCACCACCAG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGCAGCGTTCTGGGGATaGGTGGCCAAGGCGGGACCA +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVAAFWG*VAKAGP
Trigger: TGGTCCCGCCTTGGCCACCAATCCCCAGAACGCTGC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCAGCGTTCTGGGGATaGGTGGCCAAGGCGGGACCA +
Preference number: 5 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAAAFWG*VAKAGP
Trigger: TGGTCCCGCCTTGGCCACCAATCCCCAGAACGCTGC...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGGGCGGCATGGGCTTaGGGCCGTCCTCCCCGGGGT +
Preference number: 5 (lower is better)
Translates to: SLQAVISLAWPASTPVGLRAAWA*GRPPRG
Trigger: ACCCCGGGGAGGACGGCCCAAAGCCCATGCCGCCCT...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS GCA 90 bp TTGTCAAGATCCTCAGCCAGCGGCAGGTCCTGGCGGCCCAGGTCCTaGTGGATTGGCCTGGTGGTGGACAAGTTGGGACCAGACACGGGG +
Preference number: 5 (lower is better)
Translates to: LSRSSASGRSWRPRS*WIGLVVDKLGPDTG
Trigger: CCCCGTGTCTGGTCCCAACTTGTCCACCACCAGGCCAATCCAGCAGGACCTGGGCCGCCAGGACCTGCCGCTGGCTGAGGATCTTGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS CCA 90 bp TGCCCGGATTGTTGGGCGTCCTGCGGCTGGCAGCGTTCTGGGGATTaGTGGCCAAGGCGGGACCAGGGTTGGTGCTGTTCCCGATTTTGG +
Preference number: 5 (lower is better)
Translates to: CPDCWASCGWQRSGD*WPRRDQGWCCSRFW
Trigger: CCAAAATCGGGAACAGCACCAACCCTGGTCCCGCCTTGGCCACCAATCCCCAGAACGCTGCCAGCCGCAGGACGCCCAACAATCCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS CCA 90 bp CGAGGCTTCCGCTCATCTGCTGTGACCACGGGACATGCAGAGTCCTaGATGAGCCTGCCAGGGTGCAGTCCGTGCCTGGGTACCTTGGGC +
Preference number: 5 (lower is better)
Translates to: RGFRSSAVTTGHAES*MSLPGCSPCLGTLG
Trigger: GCCCAAGGTACCCAGGCACGGACTGCACCCTGGCAGGCTCATCCAGGACTCTGCATGTCCCGTGGTCACAGCAGATGAGCGGAAGCCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCTGGGCATTGGCCAGGTaGTCCACTGCGATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSWALAR*STAMAK
Trigger: CTTGGCCATCGCAGTGGACAACCTGGCCAATGCCCA...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCTGGTGGTGGACAAGTaGGGACCAGACACGGGGACC +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVLVVDK*GPDTGT
Trigger: GGTCCCCGTGTCTGGTCCCAACTTGTCCACCACCAG...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCCAGGTCCTGCTGGATaGGCCTGGTGGTGGACAAGT +
Preference number: 5 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSPGPAG*AWWWTS
Trigger: ACTTGTCCACCACCAGGCCAATCCAGCAGGACCTGG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAAGCCGGCGAAGGGGGTaGGTGGTGGAGAGGATGAAC +
Preference number: 5 (lower is better)
Translates to: FGVARKHSRGSEKCVGRASRRRG*VVERMN
Trigger: GTTCATCCTCTCCACCACCAACCCCCTTCGCCGGCT...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGCATCCACTGAGTGCTaGAGGACCTGTGGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVASTEC*RTCGQP
Trigger: GGGCTGGCCACAGGTCCTCAAGCACTCAGTGGATGC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTGCCTGGTCAGCGGCTaGGCACTGATGGCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRCLVSG*ALMAKS
Trigger: CGACTTTGCCATCAGTGCCAAGCCGCTGACCAGGCA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCCTTCTGGAACATCTCTaGGGCCCGCTGGGTCACCCA +
Preference number: 5 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACLLEHL*GPLGHP
Trigger: TGGGTGACCCAGCGGGCCCAAGAGATGTTCCAGAAG...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCTTCTGGAACATCTCTaGGGCCCGCTGGGTCACCCA +
Preference number: 5 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSLLEHL*GPLGHP
Trigger: TGGGTGACCCAGCGGGCCCAAGAGATGTTCCAGAAG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCGGGCAGGTCACCCGATaGGGTGGTCATGCTCAGATC +
Preference number: 5 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACGQVTR*GGHAQI
Trigger: GATCTGAGCATGACCACCCAATCGGGTGACCTGCCC...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp GGAGTTGGGCTGGCTGTTAGGCATGTCGATGGGTGGCCCTCGCTCTaGGCTCCAGGTGCCAGTCTTCTGGAACATCTCTTGGGCCCGCTG +
Preference number: 5 (lower is better)
Translates to: GVGLAVRHVDGWPSL*APGASLLEHLLGPL
Trigger: CAGCGGGCCCAAGAGATGTTCCAGAAGACTGGCACCTGGAGCCCAGAGCGAGGGCCACCCATCGACATGCCTAACAGCCAGCCCAACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp GTGTCCACATCAGTGTATCGGCCCAGAGAGCGCTCAGAGGTGCGGTaGCCACGGTCCCGGCGACGTTGGTGGTACCGTTGGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VSTSVYRPRERSEVR*PRSRRRWWYRWFSS
Trigger: TGAGGAGAACCAACGGTACCACCAACGTCGCCGGGACCGTGGCCACCGCACCTCTGAGCGCTCTCTGGGCCGATACACTGATGTGGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp GATGCTTCCGGTCCTTGGGTCGGCCCCGGTCCTGGTCCCGATCTTTaGAGGGCAGGTCACCCGATTGGGTGGTCATGCTCAGATCTGTCC +
Preference number: 5 (lower is better)
Translates to: DASGPWVGPGPGPDL*RAGHPIGWSCSDLS
Trigger: GGACAGATCTGAGCATGACCACCCAATCGGGTGACCTGCCCTCCAAAGATCGGGACCAGGACCGGGGCCGACCCAAGGACCGGAAGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp GTGCTGTGCATTTTGTGCGCCTGGTGGGCCAAGATGACATCCCGGTaGTCCACCACGCCACCACGCCGTTTCAGAGTTGGCCCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: VLCILCAWWAKMTSR*STTPPRRFRVGPSR
Trigger: CCTCGAGGGGCCAACTCTGAAACGGCGTGGTGGCGTGGTGGACCACCGGGATGTCATCTTGGCCCACCAGGCGCACAAAATGCACAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAAGGAACAGGGAGCGGTaGACCGTGAGGCAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: FGVARKHSRGSEKCVGRARNRER*TVRQFW
Trigger: CCAGAACTGCCTCACGGTCAACCGCTCCCTGTTCCT...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGAGGAACAGGGAGCGGTaGACCGTGAGGCAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVRNRER*TVRQFW
Trigger: CCAGAACTGCCTCACGGTCAACCGCTCCCTGTTCCT...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTGGGCATTGGCCAGGTaGTCCACTGCGATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVWALAR*STAMAK
Trigger: CTTGGCCATCGCAGTGGACAACCTGGCCAATGCCCA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGACGGCTATGGACATGTaGGCTGCAGACAGGGGACTC +
Preference number: 5 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRTAMDM*AADRGL
Trigger: GAGTCCCCTGTCTGCAGCCAACATGTCCATAGCCGT...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCACGGCTATGGACATGTaGGCTGCAGACAGGGGACTC +
Preference number: 5 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSTAMDM*AADRGL
Trigger: GAGTCCCCTGTCTGCAGCCAACATGTCCATAGCCGT...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCCAGGTCCTGCTGGATaGGCCTGGTGGTGGACAAGT +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVPGPAG*AWWWTS
Trigger: ACTTGTCCACCACCAGGCCAATCCAGCAGGACCTGG...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCTGGGTGCTGCTGGGGTaGGTGACGATAAGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACWVLLG*VTIRLF
Trigger: GAACAGCCTTATCGTCACCAACCCCAGCAGCACCCA...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCATGCCTGGTCAGCGGCTaGGCACTGATGGCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: FGVARKHSRGSEKCVGRACLVSG*ALMAKS
Trigger: CGACTTTGCCATCAGTGCCAAGCCGCTGACCAGGCA...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCTCCACAGACTGGGAGTaGGGCTGGCTGTTAGGCATG +
Preference number: 5 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSSTDWE*GWLLGM
Trigger: CATGCCTAACAGCCAGCCCAACTCCCAGTCTGTGGA...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGGGCAGGTCACCCGATaGGGTGGTCATGCTCAGATC +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVGQVTR*GGHAQI
Trigger: GATCTGAGCATGACCACCCAATCGGGTGACCTGCCC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCGATGCTTCCGGTCCTaGGGTCGGCCCCGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: QAVISLAWPASTPVGLRSRCFRS*GRPRSW
Trigger: CCAGGACCGGGGCCGACCCAAGGACCGGAAGCATCG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS TCA 90 bp TGGCCTGAGGGGTGCTGTGCATTTTGTGCGCCTGGTGGGCCAAGATaGCATCCCGGTGGTCCACCACGCCACCACGCCGTTTCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: WPEGCCAFCAPGGPR*HPGGPPRHHAVSEL
Trigger: CAACTCTGAAACGGCGTGGTGGCGTGGTGGACCACCGGGATGTCATCTTGGCCCACCAGGCGCACAAAATGCACAGCACCCCTCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238701.2
CDS GCA 90 bp AACCTGTGTCCACATCAGTGTATCGGCCCAGAGAGCGCTCAGAGGTaGGGTGGCCACGGTCCCGGCGACGTTGGTGGTACCGTTGGTTCT +
Preference number: 5 (lower is better)
Translates to: NLCPHQCIGPESAQR*GGHGPGDVGGTVGS
Trigger: AGAACCAACGGTACCACCAACGTCGCCGGGACCGTGGCCACCGCACCTCTGAGCGCTCTCTGGGCCGATACACTGATGTGGACACAGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp CTGGCTCTGGCGAAGGGAGACCCCACAGACGCGATGTCAGCCAGCTaGTCCTCGGCCTCCTCAGGGTTGAGCAGGTCTGTCTTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: LALAKGDPTDAMSAS*SSASSGLSRSVLLF
Trigger: GAAAAGCAAGACAGACCTGCTCAACCCTGAGGAGGCCGAGGACCAGCTGGCTGACATCGCGTCTGTGGGGTCTCCCTTCGCCAGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS CCA 90 bp GGCCGCTGTGGCCCAGGCTGTCGTGGGGACTGGCAGGTTCCCCGGTaGCCAGCTTGTTATTCTTCATGTTGTCAAGATCCTCAGCCAGCG +
Preference number: 5 (lower is better)
Translates to: GRCGPGCRGDWQVPR*PACYSSCCQDPQPA
Trigger: CGCTGGCTGAGGATCTTGACAACATGAAGAATAACAAGCTGGCCACCGGGGAACCTGCCAGTCCCCACGACAGCCTGGGCCACAGCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS CCA 90 bp CTGCTGGGAGGCGGGGCATGGAGGCGGCCCTGGTCTGGCCTTCCATaGGGAGGTAGTGTTCGCTGTCTGAGTAGCCATCAGTACCCATTT +
Preference number: 5 (lower is better)
Translates to: LLGGGAWRRPWSGLP*GGSVRCLSSHQYPF
Trigger: AAATGGGTACTGATGGCTACTCAGACAGCGAACACTACCTCCCCATGGAAGGCCAGACCAGGGCCGCCTCCATGCCCCGCCTCCCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp CAGGCGGTACCCGCTCTAGTGAGTAGTCATCCAGTCGCCGGGCTTTaGGTCCCAGCACAGAGGCTGAGCGCTTCATGGGGCTGGTATCAG +
Preference number: 5 (lower is better)
Translates to: QAVPALVSSHPVAGL*VPAQRLSASWGWYQ
Trigger: CTGATACCAGCCCCATGAAGCGCTCAGCCTCTGTGCTGGGACCCAAAGCCCGGCGACTGGATGACTACTCACTAGAGCGGGTACCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTCGGCCTCCTCAGGGTaGAGCAGGTCTGTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVSASSG*SRSVLL
Trigger: AAGCAAGACAGACCTGCTCAACCCTGAGGAGGCCGA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCATCGGCCTCCTCAGGGTaGAGCAGGTCTGTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: FGVARKHSRGSEKCVGRASASSG*SRSVLL
Trigger: AAGCAAGACAGACCTGCTCAACCCTGAGGAGGCCGA...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCTGCTCCCACACCGACTaGGTAGGCTTCTGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACCSHTD*VGFWFF
Trigger: GAAGAACCAGAAGCCTACCAAGTCGGTGTGGGAGCA...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGGCAGCGTTCTGGGGATaGGTGGCCAAGGCGGGACCA +
Preference number: 5 (lower is better)
Translates to: SLQAVISLAWPASTPVGLAAFWG*VAKAGP
Trigger: TGGTCCCGCCTTGGCCACCAATCCCCAGAACGCTGC...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCCGGGGTTGGACGGGTaGCCCGGATTGTTGGGCGTC +
Preference number: 5 (lower is better)
Translates to: QAVISLAWPASTPVGLRSPGLDG*PGLLGV
Trigger: GACGCCCAACAATCCGGGCAACCCGTCCAACCCCGG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCTGGAAGAACTTGCCCTaGAAGAGCTGCACGGCTACC +
Preference number: 5 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSWKNLP*KSCTAT
Trigger: GGTAGCCGTGCAGCTCTTCAAGGGCAAGTTCTTCCA...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTCCACAGACTGGGAGTaGGGCTGGCTGTTAGGCATG +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVSTDWE*GWLLGM
Trigger: CATGCCTAACAGCCAGCCCAACTCCCAGTCTGTGGA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp CGGCCCCGGTCCTGGTCCCGATCTTTGGAGGGCAGGTCACCCGATTaGGTGGTCATGCTCAGATCTGTCCCCAAACCTGTGTCCACATCA +
Preference number: 5 (lower is better)
Translates to: RPRSWSRSLEGRSPD*VVMLRSVPKPVSTS
Trigger: TGATGTGGACACAGGTTTGGGGACAGATCTGAGCATGACCACCCAATCGGGTGACCTGCCCTCCAAAGATCGGGACCAGGACCGGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCACACGTTCCCTTTCTTaGGCAAACTCCCCAGACAGC +
Preference number: 5 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACTRSLS*ANSPDS
Trigger: GCTGTCTGGGGAGTTTGCCAAAGAAAGGGAACGTGT...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTTCGGCCTCCTCAGGGTaGAGCAGGTCTGTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRSASSG*SRSVLL
Trigger: AAGCAAGACAGACCTGCTCAACCCTGAGGAGGCCGA...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTGCCTCTTCCTCTTCTaGCTCATCCTTGGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRCLFLF*LILGEL
Trigger: GAGCTCACCAAGGATGAGCAAGAAGAGGAAGAGGCA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTCTTGTTGGTGTTGTaGTTACGGTTCTCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRLLLVL*LRFSCG
Trigger: CCCGCAGGAGAACCGTAACAACAACACCAACAAGAG...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCCGGCTCTTGTTGGTGTaGTTGTTACGGTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACRLLLV*LLRFSC
Trigger: GCAGGAGAACCGTAACAACAACACCAACAAGAGCCG...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCGGCTCTTGTTGGTGTaGTTGTTACGGTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRRLLLV*LLRFSC
Trigger: GCAGGAGAACCGTAACAACAACACCAACAAGAGCCG...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTTGGGTGCTGCTGGGGTaGGTGACGATAAGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRWVLLG*VTIRLF
Trigger: GAACAGCCTTATCGTCACCAACCCCAGCAGCACCCA...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCGGCAGTGGGTCTGGGTaGGCGTTTTTGTTTACTTGG +
Preference number: 5 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSGSGSG*AFLFTW
Trigger: CCAAGTAAACAAAAACGCCAACCCAGACCCACTGCC...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCAGCTTTGGCAGCCGCTaGATGGTCTTTAGAGGTCGT +
Preference number: 5 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSSFGSR*MVFRGR
Trigger: ACGACCTCTAAAGACCATCAAGCGGCTGCCAAAGCT...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTGGAAGAACTTGCCCTaGAAGAGCTGCACGGCTACC +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVWKNLP*KSCTAT
Trigger: GGTAGCCGTGCAGCTCTTCAAGGGCAAGTTCTTCCA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGGCATCCACTGAGTGCTaGAGGACCTGTGGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: SLQAVISLAWPASTPVGLASTEC*RTCGQP
Trigger: GGGCTGGCCACAGGTCCTCAAGCACTCAGTGGATGC...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTACTGGAAGCTCTGCTaGTTCTGGGGCATGTGCCTG +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVYWKLC*FWGMCL
Trigger: CAGGCACATGCCCCAGAACAAGCAGAGCTTCCAGTA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCGAGAAGCATGAGCGCTaGGAAGAAGGTCCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACEKHER*EEGPEV
Trigger: AACTTCCGGACCTTCTTCCAAGCGCTCATGCTTCTC...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCCCACCCTTGGCAATTTaGATATCAAGGGCGGTTCGG +
Preference number: 5 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSPPLAI*ISRAVR
Trigger: CCGAACCGCCCTTGATATCAAAATTGCCAAGGGTGG...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCAGCATGGCCATCATCTCCTaGCGAAGCTCTGCATCCATC +
Preference number: 5 (lower is better)
Translates to: SRGSEKCVGRAAVLPACSMAIIS*RSSASI
Trigger: GATGGATGCAGAGCTTCGCAAGGAGATGATGGCCAT...GCTGCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCATGGCCATCATCTCCTaGCGAAGCTCTGCATCCATC +
Preference number: 5 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACMAIIS*RSSASI
Trigger: GATGGATGCAGAGCTTCGCAAGGAGATGATGGCCAT...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGATGGCCATCATCTCCTaGCGAAGCTCTGCATCCATC +
Preference number: 5 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRMAIIS*RSSASI
Trigger: GATGGATGCAGAGCTTCGCAAGGAGATGATGGCCAT...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTTCCACAGACTGGGAGTaGGGCTGGCTGTTAGGCATG +
Preference number: 5 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRSTDWE*GWLLGM
Trigger: CATGCCTAACAGCCAGCCCAACTCCCAGTCTGTGGA...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp CCATCAGTACCCATTTCTCGCATCTCCACAGACTGGGAGTTGGGCTaGCTGTTAGGCATGTCGATGGGTGGCCCTCGCTCTGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PSVPISRISTDWELG*LLGMSMGGPRSGLQ
Trigger: CTGGAGCCCAGAGCGAGGGCCACCCATCGACATGCCTAACAGCCAGCCCAACTCCCAGTCTGTGGAGATGCGAGAAATGGGTACTGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAGGAACAGGGAGCGGTaGACCGTGAGGCAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: SAGSNKFGVARKHSRGSERNRER*TVRQFW
Trigger: CCAGAACTGCCTCACGGTCAACCGCTCCCTGTTCCT...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGCGCACGGCTCTTGTaGGTGTTGTTGTTACGGTTC +
Preference number: 5 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRGARLL*VLLLRF
Trigger: GAACCGTAACAACAACACCAACAAGAGCCGTGCGCC...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp CACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGCTTGCTCCCCGGTGGCCAGCTaGTTATTCTTCATGTTGTCA +
Preference number: 5 (lower is better)
Translates to: HSRGSEKCVGRAAVLPACSPVAS*LFFMLS
Trigger: TGACAACATGAAGAATAACAAGCTGGCCACCGGGGA...GCAAGCCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTCTGGGTTGGCGTTTTaGTTTACTTGGACCACGGTG +
Preference number: 5 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRSGLAF*FTWTTV
Trigger: CACCGTGGTCCAAGTAAACAAAAACGCCAACCCAGA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGGGCAGTGGGTCTGGGTaGGCGTTTTTGTTTACTTGG +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVGSGSG*AFLFTW
Trigger: CCAAGTAAACAAAAACGCCAACCCAGACCCACTGCC...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGGCAGTGGGTCTGGGTaGGCGTTTTTGTTTACTTGG +
Preference number: 5 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAGSGSG*AFLFTW
Trigger: CCAAGTAAACAAAAACGCCAACCCAGACCCACTGCC...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGTCCTTTCCTTTGCTATaGCCAGTGAAGGCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFRSFPLL*PVKAKA
Trigger: GGCCTTTGCCTTCACTGGCAATAGCAAAGGAAAGGA...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGCATCCACTGAGTGCTaGAGGACCTGTGGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: QAVISLAWPASTPVGLRSASTEC*RTCGQP
Trigger: GGGCTGGCCACAGGTCCTCAAGCACTCAGTGGATGC...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGTGCCTGGTCAGCGGCTaGGCACTGATGGCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: SAGSNKFGVARKHSRGSECLVSG*ALMAKS
Trigger: CGACTTTGCCATCAGTGCCAAGCCGCTGACCAGGCA...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp GCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGCCGTCCTTCCGGGAGGTGAAGACAATGTaGAACACGCGAAGGGCGTTT +
Preference number: 5 (lower is better)
Translates to: ASTPVGLRSVWGVQPSFREVKTM*NTRRAF
Trigger: AAACGCCCTTCGCGTGTTCAACATTGTCTTCACCTC...CCGGAAGGACGGCTGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCCGTGCCTGGGTACCTaGGGCTGTGCAGGAGCTCAT +
Preference number: 5 (lower is better)
Translates to: QAVISLAWPASTPVGLRSPCLGT*GCAGAH
Trigger: ATGAGCTCCTGCACAGCCCAAGGTACCCAGGCACGG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238701.2
CDS TCA 90 bp GGCGGCCCTGGTCTGGCCTTCCATGGGGAGGTAGTGTTCGCTGTCTaGGTAGCCATCAGTACCCATTTCTCGCATCTCCACAGACTGGGA +
Preference number: 5 (lower is better)
Translates to: GGPGLAFHGEVVFAV*VAISTHFSHLHRLG
Trigger: TCCCAGTCTGTGGAGATGCGAGAAATGGGTACTGATGGCTACTCAGACAGCGAACACTACCTCCCCATGGAAGGCCAGACCAGGGCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS GCA 90 bp TTCTTATCGCACGGCTTCCCGCTGAGGCAGGAGAGCATGATGTTGTaGCACGCTTCTCCTGTGGCGCTCCGGAAGAGAAGCATGAGCGCT +
Preference number: 5 (lower is better)
Translates to: FLSHGFPLRQESMML*HASPVALRKRSMSA
Trigger: AGCGCTCATGCTTCTCTTCCGGAGCGCCACAGGAGAAGCGTGGCACAACATCATGCTCTCCTGCCTCAGCGGGAAGCCGTGCGATAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000153691.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS CCA 90 bp CCCGGTCCTGGTCCCGATCTTTGGAGGGCAGGTCACCCGATTGGGTaGTCATGCTCAGATCTGTCCCCAAACCTGTGTCCACATCAGTGT +
Preference number: 5 (lower is better)
Translates to: PGPGPDLWRAGHPIG*SCSDLSPNLCPHQC
Trigger: ACACTGATGTGGACACAGGTTTGGGGACAGATCTGAGCATGACCACCCAATCGGGTGACCTGCCCTCCAAAGATCGGGACCAGGACCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAGGACGACTTGTAAACTaGGGATTCCAGACACCAGCT +
Preference number: 5 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAGRLVN*GFQTPA
Trigger: AGCTGGTGTCTGGAATCCCAAGTTTACAAGTCGTCC...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCTCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGACGGCTATGGACATGTaGGCTGCAGACAGGGGACTC +
Preference number: 5 (lower is better)
Translates to: SLQAVISLAWPASTPVGLTAMDM*AADRGL
Trigger: GAGTCCCCTGTCTGCAGCCAACATGTCCATAGCCGT...CAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTCGGCTCTTGTTGGTGTaGTTGTTACGGTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: KFGVARKHSRGSEKCVGRRLLLV*LLRFSC
Trigger: GCAGGAGAACCGTAACAACAACACCAACAAGAGCCG...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTCCCCGGTGGCCAGCTaGTTATTCTTCATGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVSPVAS*LFFMLS
Trigger: TGACAACATGAAGAATAACAAGCTGGCCACCGGGGA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGTGGGTGCTGCTGGGGTaGGTGACGATAAGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: SAGSNKFGVARKHSRGSEWVLLG*VTIRLF
Trigger: GAACAGCCTTATCGTCACCAACCCCAGCAGCACCCA...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGTCCTTTCCTTTGCTATaGCCAGTGAAGGCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVSFPLL*PVKAKA
Trigger: GGCCTTTGCCTTCACTGGCAATAGCAAAGGAAAGGA...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCAATTAGCACGATGGTGTaGAGAGCGATCATGGCCATG +
Preference number: 5 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAISTMV*RAIMAM
Trigger: CATGGCCATGATCGCTCTCAACACCATCGTGCTAAT...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGAGAAGCATGAGCGCTaGGAAGAAGGTCCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: KFGVARKHSRGSEKCVGREKHER*EEGPEV
Trigger: AACTTCCGGACCTTCTTCCAAGCGCTCATGCTTCTC...ACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp CAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTCTTCTGGAACATCTCTaGGGCCCGCTGGGTCACCCA +
Preference number: 5 (lower is better)
Translates to: QAVISLAWPASTPVGLRSLLEHL*GPLGHP
Trigger: TGGGTGACCCAGCGGGCCCAAGAGATGTTCCAGAAG...ACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS GCA 90 bp AAGGGTGGGGACACGACGAACTGCCACATTCGATACTGGAAGCTCTaGTTGTTCTGGGGCATGTGCCTGGTCAGCGGCTTGGCACTGATG +
Preference number: 5 (lower is better)
Translates to: KGGDTTNCHIRYWKL*LFWGMCLVSGLALM
Trigger: CATCAGTGCCAAGCCGCTGACCAGGCACATGCCCCAGAACAAGCAGAGCTTCCAGTATCGAATGTGGCAGTTCGTCGTGTCCCCACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS GCA 90 bp CCTGGTCCCGATCTTTGGAGGGCAGGTCACCCGATTGGGTGGTCATaGTCAGATCTGTCCCCAAACCTGTGTCCACATCAGTGTATCGGC +
Preference number: 5 (lower is better)
Translates to: PGPDLWRAGHPIGWS*SDLSPNLCPHQCIG
Trigger: GCCGATACACTGATGTGGACACAGGTTTGGGGACAGATCTGAGCATGACCACCCAATCGGGTGACCTGCCCTCCAAAGATCGGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238337.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCACACTCCATGTATCCATaGAGCTCACGTTCAATCTGC +
Preference number: 5 (lower is better)
Translates to: FGVARKHSRGSEKCVGRAHSMYP*SSRSIC
Trigger: GCAGATTGAACGTGAGCTCAATGGATACATGGAGTG...TGCACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGTCCAGCTTGGCACTTTaGATGCTGGCTCTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: SAGSNKFGVARKHSRGSESSLAL*MLALAK
Trigger: CTTCGCCAGAGCCAGCATCAAAAGTGCCAAGCTGGA...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGAAGGATGTACCAGGTTaGATGACAGCCCAGATGACT +
Preference number: 5 (lower is better)
Translates to: SLAWPASTPVGLRSVWGVKDVPG*MTAQMT
Trigger: AGTCATCTGGGCTGTCATCAAACCTGGTACATCCTT...CACGCCCCACACACTTCTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp TCTGCAGGCAGTAATAAGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGTGCTCCCACACCGACTaGGTAGGCTTCTGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SAGSNKFGVARKHSRGSECSHTD*VGFWFF
Trigger: GAAGAACCAGAAGCCTACCAAGTCGGTGTGGGAGCA...CTCAGACCCACGGGAGTGCTTGCGGGCCACGCCAAACTTATTACTGCCTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000121390.8
ENSMUST00000122053.2
ENSMUST00000215756.2
ENSMUST00000238701.2
CDS-3UTR CAA 90 bp AGTTTGGCGTGGCCCGCAAGCACTCCCGTGGGTCTGAGAAGTGTGTGGGGCGTGCCCAGGTCGATCATCTaGATCACCATCTCAAAGGTA +