Pregenerated sensors for CACFD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015488Ensembl transcript IDs: ENSMUST00000114003.2, ENSMUST00000114004.8, ENSMUST00000114005.9, ENSMUST00000114006.8, ENSMUST00000114007.8, ENSMUST00000133807.2
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCTAGTCTGGGCTGGACAGTGCCCATGGTCAGAGTCAAAGCAATaGGCTCCAGAGCCACTGTGCCATGGGACTGCCAAGAACCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: GLVWAGQCPWSESKQ*APEPLCHGTAKNLR Trigger: CCTGAGGTTCTTGGCAGTCCCATGGCACAGTGGCTCTGGAGCCCATTGCTTTGACTCTGACCATGGGCACTGTCCAGCCCAGACTAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR CCA 90 bp | TGTCTACTCCTCTGGGCCTCAAGCCCTGAGAAGCTAAGGATTCCCTaGAGACTCAGTGACTCCAGGGCTGGGTTCCATGGACAGGTCCGG | + |
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Preference number: 1 (lower is better) Translates to: CLLLWASSPEKLRIP*RLSDSRAGFHGQVR Trigger: CCGGACCTGTCCATGGAACCCAGCCCTGGAGTCACTGAGTCTCCAGGGAATCCTTAGCTTCTCAGGGCTTGAGGCCCAGAGGAGTAGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR GCA 90 bp | CCCTGGAGCCATGTGCCAGTGAAACAGCTCTCCTTGTCCCAACCATaGAGGCTTACTCTCTGTGCTCTGGTACCCGAGAAGGGGCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: PWSHVPVKQLSLSQP*RLTLCALVPEKGPS Trigger: ACTTGGCCCCTTCTCGGGTACCAGAGCACAGAGAGTAAGCCTGCATGGTTGGGACAAGGAGAGCTGTTTCACTGGCACATGGCTCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR CCA 90 bp | GTAGCCTTTGAATTCTACTGTGGAGGCAGGAGGCCTGGGCAGAACTaGCCCAAGTCCATGCCTACCCAAGTAACCAGAGGAGCAGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: VAFEFYCGGRRPGQN*PKSMPTQVTRGAGG Trigger: CCCACCTGCTCCTCTGGTTACTTGGGTAGGCATGGACTTGGGCCAGTTCTGCCCAGGCCTCCTGCCTCCACAGTAGAATTCAAAGGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR GCA 90 bp | AGTCCGGAGAACAGGGAGGCACAGGAAGACTCAAGGAGTGCTCCTTaGAGGTGCTCCTCTCCCAGGCCATTTAACAGAGCTGACACTCAG | + |
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Preference number: 1 (lower is better) Translates to: SPENREAQEDSRSAP*RCSSPRPFNRADTQ Trigger: CTGAGTGTCAGCTCTGTTAAATGGCCTGGGAGAGGAGCACCTGCAAGGAGCACTCCTTGAGTCTTCCTGTGCCTCCCTGTTCTCCGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
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| 3UTR TCA 90 bp | CTGTCAGCAGGCGCACATACTGTGTGCTCTCCCTGCAGAAGCCTCTaGGTCCCACCAATCCTGAGGGAGGGGAACCTGATCTTAATGACA | + |
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Preference number: 1 (lower is better) Translates to: LSAGAHTVCSPCRSL*VPPILREGNLILMT Trigger: TGTCATTAAGATCAGGTTCCCCTCCCTCAGGATTGGTGGGACTCAGAGGCTTCTGCAGGGAGAGCACACAGTATGTGCGCCTGCTGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
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| 3UTR GCA 90 bp | CCTGGTGGCAGTAGCTGGCCTCAGGACACTGTTGTACTCTTCCTCTaGTCTGACGACAGGTCATGGAGCAGAACTGAAGCCCTAACTTCC | + |
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Preference number: 1 (lower is better) Translates to: PGGSSWPQDTVVLFL*SDDRSWSRTEALTS Trigger: GGAAGTTAGGGCTTCAGTTCTGCTCCATGACCTGTCGTCAGAGCAGAGGAAGAGTACAACAGTGTCCTGAGGCCAGCTACTGCCACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
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| 3UTR CCA 90 bp | ACAGAAGACACCCAGACACAGACAAGAATGAGGCCTAGTCTGGGCTaGACAGTGCCCATGGTCAGAGTCAAAGCAATGGGCTCCAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: TEDTQTQTRMRPSLG*TVPMVRVKAMGSRA Trigger: GGCTCTGGAGCCCATTGCTTTGACTCTGACCATGGGCACTGTCCAGCCCAGACTAGGCCTCATTCTTGTCTGTGTCTGGGTGTCTTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR CCA 90 bp | TGTTTGGAGCCCCATACAAACCCAGGTGCTTTGGGGCTGCTGAGGTaGAAACAGGTGGATTCCTACAGCTCACTGGCTTTGGCAGTCTCG | + |
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Preference number: 1 (lower is better) Translates to: CLEPHTNPGALGLLR*KQVDSYSSLALAVS Trigger: CGAGACTGCCAAAGCCAGTGAGCTGTAGGAATCCACCTGTTTCCACCTCAGCAGCCCCAAAGCACCTGGGTTTGTATGGGGCTCCAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
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| 3UTR TCA 90 bp | CAGAGCCACTGTGCCATGGGACTGCCAAGAACCTCAGGACTTAAGTaGCTGACCACCCCAAATTGGCCTATATCTGAGGGCCTCCACCTT | + |
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Preference number: 1 (lower is better) Translates to: QSHCAMGLPRTSGLK*LTTPNWPISEGLHL Trigger: AAGGTGGAGGCCCTCAGATATAGGCCAATTTGGGGTGGTCAGTCACTTAAGTCCTGAGGTTCTTGGCAGTCCCATGGCACAGTGGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR TCA 90 bp | TGGGTGCAAAAGGAGCCACAGAAGACACCCAGACACAGACAAGAATaGGGCCTAGTCTGGGCTGGACAGTGCCCATGGTCAGAGTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: WVQKEPQKTPRHRQE*GLVWAGQCPWSESK Trigger: CTTTGACTCTGACCATGGGCACTGTCCAGCCCAGACTAGGCCTCATTCTTGTCTGTGTCTGGGTGTCTTCTGTGGCTCCTTTTGCACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR TCA 90 bp | AAGACCATCTCAAATACAGAGGGAAAGGCAAAGACAAGGAAGGGGTaGGGAGATGGCTTAGCTGGTGCCTGCTGCACATGCACGAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: KTISNTEGKAKTRKG*GDGLAGACCTCTRA Trigger: GGCTCTCGTGCATGTGCAGCAGGCACCAGCTAAGCCATCTCCTCACCCCTTCCTTGTCTTTGCCTTTCCCTCTGTATTTGAGATGGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
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| 3UTR CCA 90 bp | CTCAAATACAGAGGGAAAGGCAAAGACAAGGAAGGGGTGAGGAGATaGCTTAGCTGGTGCCTGCTGCACATGCACGAGAGCCTGTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: LKYRGKGKDKEGVRR*LSWCLLHMHESLFG Trigger: TCCAAACAGGCTCTCGTGCATGTGCAGCAGGCACCAGCTAAGCCATCTCCTCACCCCTTCCTTGTCTTTGCCTTTCCCTCTGTATTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
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| 3UTR CCA 90 bp | ACGCTGCACTTGCCAGAACCAGAGAAGTGTGGATTTAGAGGGAAATaGTGTTTCTGTTCGGCAGTCTCACATCTGGCCACGCTCCTCGCA | + |
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Preference number: 1 (lower is better) Translates to: TLHLPEPEKCGFRGK*CFCSAVSHLATLLA Trigger: TGCGAGGAGCGTGGCCAGATGTGAGACTGCCGAACAGAAACACCATTTCCCTCTAAATCCACACTTCTCTGGTTCTGGCAAGTGCAGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
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| 3UTR GCA 90 bp | GGGGAACCTGATCTTAATGACAATATTGGTAATTACAGTGAGTACTaGTGTCTAGCCAGGCTCTCATGGGAAAGCCCTTCCTCGGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: GEPDLNDNIGNYSEY*CLARLSWESPSSEA Trigger: GGCCTCCGAGGAAGGGCTTTCCCATGAGAGCCTGGCTAGACAGCAGTACTCACTGTAATTACCAATATTGTCATTAAGATCAGGTTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
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| 3UTR CCA 90 bp | GCTCGGGGAGGCAGGTACTGGGTCCCATTCTTTAGCACCTGTTATTaGATGAGTCAGTGTCTGTGCCCACTGCTATCAAATAAAAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: ARGGRYWVPFFSTCY*MSQCLCPLLSNKSS Trigger: AGAGCTTTTATTTGATAGCAGTGGGCACAGACACTGACTCATCCAATAACAGGTGCTAAAGAATGGGACCCAGTACCTGCCTCCCCGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000133807.2 |
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| 3UTR CCA 90 bp | GTGGATTTAGAGGGAAATGGTGTTTCTGTTCGGCAGTCTCACATCTaGCCACGCTCCTCGCAAGGCTTCACCATGCCTACACATACATTA | + |
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Preference number: 1 (lower is better) Translates to: VDLEGNGVSVRQSHI*PRSSQGFTMPTHTL Trigger: TAATGTATGTGTAGGCATGGTGAAGCCTTGCGAGGAGCGTGGCCAGATGTGAGACTGCCGAACAGAAACACCATTTCCCTCTAAATCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
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| 3UTR TCA 90 bp | AATGGATTCCCTAGTGAAGTACAATCTCACCATACATGTAGCCTTTaGATTCTACTGTGGAGGCAGGAGGCCTGGGCAGAACTGGCCCAA | + |
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Preference number: 1 (lower is better) Translates to: NGFPSEVQSHHTCSL*ILLWRQEAWAELAQ Trigger: TTGGGCCAGTTCTGCCCAGGCCTCCTGCCTCCACAGTAGAATTCAAAGGCTACATGTATGGTGAGATTGTACTTCACTAGGGAATCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR CCA 90 bp | ACAGATCAGAGCTTCTATACCAAGGAGAATGAATGTCTACTCCTCTaGGCCTCAAGCCCTGAGAAGCTAAGGATTCCCTGGAGACTCAGT | + |
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Preference number: 1 (lower is better) Translates to: TDQSFYTKENECLLL*ASSPEKLRIPWRLS Trigger: ACTGAGTCTCCAGGGAATCCTTAGCTTCTCAGGGCTTGAGGCCCAGAGGAGTAGACATTCATTCTCCTTGGTATAGAAGCTCTGATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR TCA 90 bp | CTCCTCGCAAGGCTTCACCATGCCTACACATACATTAGCAAATGCTaGTGTACACATATCCACTACAACCTGCCTGGAAACTCCCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: LLARLHHAYTYISKC*CTHIHYNLPGNSQV Trigger: CACTTGGGAGTTTCCAGGCAGGTTGTAGTGGATATGTGTACATCAGCATTTGCTAATGTATGTGTAGGCATGGTGAAGCCTTGCGAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
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| 3UTR GCA 90 bp | GTATTACATTTATCTCAGAAGTGCTGCAGTCCGACACGCTGCACTTaGCAGAACCAGAGAAGTGTGGATTTAGAGGGAAATGGTGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: VLHLSQKCCSPTRCT*QNQRSVDLEGNGVS Trigger: AGAAACACCATTTCCCTCTAAATCCACACTTCTCTGGTTCTGGCAAGTGCAGCGTGTCGGACTGCAGCACTTCTGAGATAAATGTAATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
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| 3UTR GCA 90 bp | TGGGTCCCATTCTTTAGCACCTGTTATTGGATGAGTCAGTGTCTGTaGCCACTGCTATCAAATAAAAGCTCTGTAGAAGAAAAGGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: WVPFFSTCYWMSQCL*PLLSNKSSVEEKAS Trigger: AGAAGCCTTTTCTTCTACAGAGCTTTTATTTGATAGCAGTGGGCACAGACACTGACTCATCCAATAACAGGTGCTAAAGAATGGGACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000133807.2 |
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| 3UTR CAA 90 bp | GGAGATGGCTTAGCTGGTGCCTGCTGCACATGCACGAGAGCCTGTTaGGAGCCCCATACAAACCCAGGTGCTTTGGGGCTGCTGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: GDGLAGACCTCTRAC*EPHTNPGALGLLRW Trigger: CCACCTCAGCAGCCCCAAAGCACCTGGGTTTGTATGGGGCTCCAAACAGGCTCTCGTGCATGTGCAGCAGGCACCAGCTAAGCCATCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
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| 3UTR-3UTR TCA 90 bp | TCTAGCCAGGCTCTCATGGGAAAGCCCTTCCTCGGAGGCCCCCAGGTATTACATCCCTGCAGAAGCCTCTaGGTCCCACCAATCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SSQALMGKPFLGGPQVLHPCRSL*VPPILR Trigger: CCTCAGGATTGGTGGGACTCAGAGGCTTCTGCAGGG...ATGTAATACCTGGGGGCCTCCGAGGAAGGGCTTTCCCATGAGAGCCTGGCTAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGCCACTCCCAAGGTTGCTCTTCTGCCCAGGATGCTGCATCCTGGGAGTGCTACTCTTCCTCTGCTCTaGCGACAGGTCATGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LATPKVALLPRMLHPGSATLPLL*RQVMEQ Trigger: CTGCTCCATGACCTGTCGTCAGAGCAGAGGAAGAGT...AGCACTCCCAGGATGCAGCATCCTGGGCAGAAGAGCAACCTTGGGAGTGGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGAGAGAGACACCCAGAATGCCTCTTGGGGAAGTAACTGAGTCGCGTATGCCCTGCAGAAGCCTCTaGGTCCCACCAATCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GRRETPRMPLGEVTESRMPCRSL*VPPILR Trigger: CCTCAGGATTGGTGGGACTCAGAGGCTTCTGCAGGG...CATACGCGACTCAGTTACTTCCCCAAGAGGCATTCTGGGTGTCTCTCTCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
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| 3UTR-3UTR GCA 90 bp | TGGACAGTGCCCATGGTCAGAGTCAAAGCAATGGGCTCCAGAGCCACTGTGCCATCAAGGAGTGCTCCTTaGAGGTGCTCCTCTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: WTVPMVRVKAMGSRATVPSRSAP*RCSSPR Trigger: CCTGGGAGAGGAGCACCTGCAAGGAGCACTCCTTGA...TGGCACAGTGGCTCTGGAGCCCATTGCTTTGACTCTGACCATGGGCACTGTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
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| 3UTR-3UTR CCA 90 bp | GCATGTCCCTGGAGCCATGTGCCAGTGAAACAGCTCTCCTTGTCCCAACCATGCTGTGTAGGGTGGGTCTaGTCTCTGCCCAGCTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: ACPWSHVPVKQLSLSQPCCVGWV*SLPSSP Trigger: TGGAGAGCTGGGCAGAGACCAGACCCACCCTACACA...GCATGGTTGGGACAAGGAGAGCTGTTTCACTGGCACATGGCTCCAGGGACATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR CAA 90 bp | CCATCTCTCCTGCTCCTGGTGGCAGTAGCTGGCCTCAGGACACTGTaGTACTCTTCCTCTGCTCTGACGACAGGTCATGGAGCAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: PSLLLLVAVAGLRTL*YSSSALTTGHGAEL Trigger: CAGTTCTGCTCCATGACCTGTCGTCAGAGCAGAGGAAGAGTACAACAGTGTCCTGAGGCCAGCTACTGCCACCAGGAGCAGGAGAGATGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTGCAAAAGGAGCCACAGAAGACACCCAGACACAGACAAGAATGAGGCCTGGTGGGTCTGGTCTCTaGCCAGCTCTCCAAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: VGAKGATEDTQTQTRMRPGGSGL*PALQRL Trigger: GAGCCTTTGGAGAGCTGGGCAGAGACCAGACCCACC...AGGCCTCATTCTTGTCTGTGTCTGGGTGTCTTCTGTGGCTCCTTTTGCACCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR-3UTR CCA 90 bp | GGACAGTGGGAAGAGAACAGTGCAGAGAAAGGTGAGGGGACAGCAAGGCATGTCCAAGTCTGTGTAGGGTaGGTCTGGTCTCTGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: GQWEENSAEKGEGTARHVQVCVG*VWSLPS Trigger: GCTGGGCAGAGACCAGACCCACCCTACACAGACTTG...GACATGCCTTGCTGTCCCCTCACCTTTCTCTGCACTGTTCTCTTCCCACTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGCTAAGGATTCCCTGGAGACTCAGTGACTCCAGGGCTGGGTTCCATGGACTCCCCAGTTCAGCATaGCCAGGCTCTCTGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: EKLRIPWRLSDSRAGFHGLPSSA*PGSLEN Trigger: GTTCTCCAGAGAGCCTGGCCATGCTGAACTGGGGAG...TCCATGGAACCCAGCCCTGGAGTCACTGAGTCTCCAGGGAATCCTTAGCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR-3UTR TCA 90 bp | CATGCCTACCCAAGTAACCAGAGGAGCAGGTGGGGATTTTTCTCCTCCTGGGAGGCAGGGCTCAGCACTTaGCACATCATCTTCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: HAYPSNQRSRWGFFSSWEAGLST*HIIFSQ Trigger: CTGGCTGAAGATGATGTGTCAAGTGCTGAGCCCTGC...CTCCCAGGAGGAGAAAAATCCCCACCTGCTCCTCTGGTTACTTGGGTAGGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGCCTCAGGACACTGTTGTACTCTTCCTCTGCTCTGACGACAGGTCATGGGCAGGGCTCAGCACTTaGCACATCATCTTCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SWPQDTVVLFLCSDDRSWAGLST*HIIFSQ Trigger: CTGGCTGAAGATGATGTGTCAAGTGCTGAGCCCTGC...CCATGACCTGTCGTCAGAGCAGAGGAAGAGTACAACAGTGTCCTGAGGCCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCCATGTGCCAGTGAAACAGCTCTCCTTGTCCCAACCATGCAGGCTTACTCTTGTGTAGGGTGGGTCTaGTCTCTGCCCAGCTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: EPCASETALLVPTMQAYSCVGWV*SLPSSP Trigger: TGGAGAGCTGGGCAGAGACCAGACCCACCCTACACA...AGAGTAAGCCTGCATGGTTGGGACAAGGAGAGCTGTTTCACTGGCACATGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCAAAGCAATGGGCTCCAGAGCCACTGTGCCATGGGACTGCCAAGAACCTCAACCAGAGGAGCAGGTaGGGATTTTTCTCCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ESKQWAPEPLCHGTAKNLNQRSR*GFFSSW Trigger: CCAGGAGGAGAAAAATCCCCACCTGCTCCTCTGGTT...GAGGTTCTTGGCAGTCCCATGGCACAGTGGCTCTGGAGCCCATTGCTTTGACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTGCAAAAGGAGCCACAGAAGACACCCAGACACAGACAAGAATGAGGCCTCAGTGCAGAGAAAGGTaGGGGGACAGCAAGGCATGT | + |
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Preference number: 2 (lower is better) Translates to: VGAKGATEDTQTQTRMRPQCRER*GDSKAC Trigger: ACATGCCTTGCTGTCCCCTCACCTTTCTCTGCACTG...AGGCCTCATTCTTGTCTGTGTCTGGGTGTCTTCTGTGGCTCCTTTTGCACCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTCCCTGGAGCCATGTGCCAGTGAAACAGCTCTCCTTGTCCCAACCATGCAGAGACACAGACAAGAATaGGGCCTAGTCTGGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: MSLEPCASETALLVPTMQRHRQE*GLVWAG Trigger: TCCAGCCCAGACTAGGCCTCATTCTTGTCTGTGTCT...CTGCATGGTTGGGACAAGGAGAGCTGTTTCACTGGCACATGGCTCCAGGGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTCCCTGGAGCCATGTGCCAGTGAAACAGCTCTCCTTGTCCCAACCATGCAGGGTGTCACAGGACAGTaGGAAGAGAACAGTGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: MSLEPCASETALLVPTMQGVTGQ*EENSAE Trigger: CTCTGCACTGTTCTCTTCCCACTGTCCTGTGACACC...CTGCATGGTTGGGACAAGGAGAGCTGTTTCACTGGCACATGGCTCCAGGGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGCTAAGGATTCCCTGGAGACTCAGTGACTCCAGGGCTGGGTTCCATGGACAAACAAACCAGGGGTaGGTGCAAAAGGAGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: EKLRIPWRLSDSRAGFHGQTNQG*VQKEPQ Trigger: CTGTGGCTCCTTTTGCACCCACCCCTGGTTTGTTTG...TCCATGGAACCCAGCCCTGGAGTCACTGAGTCTCCAGGGAATCCTTAGCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGAAACAGGTGGATTCCTACAGCTCACTGGCTTTGGCAGTCTCGCCAGATATCTAGCCAGGCTCTCATaGGAAAGCCCTTCCTCGGAG | + |
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Preference number: 2 (lower is better) Translates to: VETGGFLQLTGFGSLARYLARLS*ESPSSE Trigger: CTCCGAGGAAGGGCTTTCCCATGAGAGCCTGGCTAG...ATATCTGGCGAGACTGCCAAAGCCAGTGAGCTGTAGGAATCCACCTGTTTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
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| 3UTR-3UTR GCA 90 bp | CATCATCTTCAGCCAGGCCACCAAATGTGCCTAATGGCCAAGGACTCATCTAATGGTGGGTCTGGTCTCTaGCCAGCTCTCCAAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: HHLQPGHQMCLMAKDSSNGGSGL*PALQRL Trigger: GAGCCTTTGGAGAGCTGGGCAGAGACCAGACCCACC...ATTAGATGAGTCCTTGGCCATTAGGCACATTTGGTGGCCTGGCTGAAGATGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR-3UTR GCA 90 bp | ATCAGAGCTTCTATACCAAGGAGAATGAATGTCTACTCCTCTGGGCCTCAAGCCGGTGGGTCTGGTCTCTaGCCAGCTCTCCAAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: IRASIPRRMNVYSSGPQAGGSGL*PALQRL Trigger: GAGCCTTTGGAGAGCTGGGCAGAGACCAGACCCACC...GGCTTGAGGCCCAGAGGAGTAGACATTCATTCTCCTTGGTATAGAAGCTCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR-3UTR GCA 90 bp | TGGACAGTGCCCATGGTCAGAGTCAAAGCAATGGGCTCCAGAGCCACTGTGCCATCTCTGGAGAACTTCTaGTATCCCCAAAGTCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: WTVPMVRVKAMGSRATVPSLENF*YPQSPQ Trigger: CTGTGGACTTTGGGGATAGCAGAAGTTCTCCAGAGA...TGGCACAGTGGCTCTGGAGCCCATTGCTTTGACTCTGACCATGGGCACTGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCCCTGATTTTAGACACAGCAGAAGACTGTCAGCAGGCGCACATACTGTGTGCTGCAGTCCGACACGCTaGACTTGCCAGAACCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SPDFRHSRRLSAGAHTVCCSPTR*TCQNQR Trigger: TCTCTGGTTCTGGCAAGTGCAGCGTGTCGGACTGCA...GCACACAGTATGTGCGCCTGCTGACAGTCTTCTGCTGTGTCTAAAATCAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGTGCAAAAGGAGCCACAGAAGACACCCAGACACAGACAAGAATGAGGCCTAACCAGAGGAGCAGGTaGGGATTTTTCTCCTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VGAKGATEDTQTQTRMRPNQRSR*GFFSSW Trigger: CCAGGAGGAGAAAAATCCCCACCTGCTCCTCTGGTT...AGGCCTCATTCTTGTCTGTGTCTGGGTGTCTTCTGTGGCTCCTTTTGCACCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR-3UTR CCA 90 bp | AACTTGCTTTACTCCAAAAGTAACCCAGTCAACAAACAAACCAGGGGTGGGTGCTGGAGGCAGGAGGCCTaGGCAGAACTGGCCCAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: NLLYSKSNPVNKQTRGGCWRQEA*AELAQV Trigger: GACTTGGGCCAGTTCTGCCCAGGCCTCCTGCCTCCA...GCACCCACCCCTGGTTTGTTTGTTGACTGGGTTACTTTTGGAGTAAAGCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGACAGTGCCCATGGTCAGAGTCAAAGCAATGGGCTCCAGAGCCACTGTGCCATTATACCTCACCCCATaGCTGCCTAGCACAAAATGG | + |
|
Preference number: 2 (lower is better) Translates to: WTVPMVRVKAMGSRATVPLYLTP*LPSTKW Trigger: CCATTTTGTGCTAGGCAGCCATGGGGTGAGGTATAA...TGGCACAGTGGCTCTGGAGCCCATTGCTTTGACTCTGACCATGGGCACTGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAGACAAACAGACACACACACACACACACAGCACATCATACCAGACAAACACATCCCTGGAGACTCAGTaGCTCCAGGGCTGGGTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: PDKQTHTHTHSTSYQTNTSLETQ*LQGWVP Trigger: TGGAACCCAGCCCTGGAGTCACTGAGTCTCCAGGGA...TGTGTTTGTCTGGTATGATGTGCTGTGTGTGTGTGTGTGTGTCTGTTTGTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGACAGTGCCCATGGTCAGAGTCAAAGCAATGGGCTCCAGAGCCACTGTGCCACATACATGTAGCCTTTaGATTCTACTGTGGAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: WTVPMVRVKAMGSRATVPHTCSL*ILLWRQ Trigger: CTGCCTCCACAGTAGAATTCAAAGGCTACATGTATG...TGGCACAGTGGCTCTGGAGCCCATTGCTTTGACTCTGACCATGGGCACTGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCAATGGGCTCCAGAGCCACTGTGCCATGGGACTGCCAAGAACCTCAGGACTTAAATTGGCCTATATCTaGGGGCCTCCACCTTTATAC | + |
|
Preference number: 2 (lower is better) Translates to: SNGLQSHCAMGLPRTSGLKLAYI*GPPPLY Trigger: GTATAAAGGTGGAGGCCCTCAGATATAGGCCAATTT...AAGTCCTGAGGTTCTTGGCAGTCCCATGGCACAGTGGCTCTGGAGCCCATTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR-3UTR TCA 90 bp | CATCATCTTCAGCCAGGCCACCAAATGTGCCTAATGGCCAAGGACTCATCTAATAACGGCAGTAGGCAATaGGGACAGGCCACTCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: HHLQPGHQMCLMAKDSSNNGSRQ*GQATLP Trigger: AGGCAGAGTGGCCTGTCCTCATTGCCTACTGCCGTT...ATTAGATGAGTCCTTGGCCATTAGGCACATTTGGTGGCCTGGCTGAAGATGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGATTTTAGACACAGCAGAAGACTGTCAGCAGGCGCACATACTGTGTGCTCTCTGCAGTCCGACACGCTaGACTTGCCAGAACCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LILDTAEDCQQAHILCALCSPTR*TCQNQR Trigger: TCTCTGGTTCTGGCAAGTGCAGCGTGTCGGACTGCA...GAGAGCACACAGTATGTGCGCCTGCTGACAGTCTTCTGCTGTGTCTAAAATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCACAGATCAGAGCTTCTATACCAAGGAGAATGAATGTCTACTCCTCTGGGCCTGTGTAGGGTGGGTCTaGTCTCTGCCCAGCTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: STDQSFYTKENECLLLWACVGWV*SLPSSP Trigger: TGGAGAGCTGGGCAGAGACCAGACCCACCCTACACA...GGCCCAGAGGAGTAGACATTCATTCTCCTTGGTATAGAAGCTCTGATCTGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCACAGATCAGAGCTTCTATACCAAGGAGAATGAATGTCTACTCCTCTGGGCCCAAGTCTGTGTAGGGTaGGTCTGGTCTCTGCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: STDQSFYTKENECLLLWAQVCVG*VWSLPS Trigger: GCTGGGCAGAGACCAGACCCACCCTACACAGACTTG...GGCCCAGAGGAGTAGACATTCATTCTCCTTGGTATAGAAGCTCTGATCTGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGTGAAAGTAATCCAGCTGCTTCCCCATCCTTCCACTAGTAGGACACTTGTGCTAGCCAGGCTCTCATaGGAAAGCCCTTCCTCGGAG | + |
|
Preference number: 2 (lower is better) Translates to: QVKVIQLLPHPSTSRTLVLARLS*ESPSSE Trigger: CTCCGAGGAAGGGCTTTCCCATGAGAGCCTGGCTAG...CACAAGTGTCCTACTAGTGGAAGGATGGGGAAGCAGCTGGATTACTTTCACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTAGCCAGGCTCTCATGGGAAAGCCCTTCCTCGGAGGCCCCCAGGTATTACATAGTGTCTGTGCCCACTaGTATCAAATAAAAGCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SSQALMGKPFLGGPQVLHSVCAH*YQIKAL Trigger: CAGAGCTTTTATTTGATAGCAGTGGGCACAGACACT...ATGTAATACCTGGGGGCCTCCGAGGAAGGGCTTTCCCATGAGAGCCTGGCTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCTTCAGCCAGGCCACCAAATGTGCCTAATGGCCAAGGACTCATCTAATAAGGGAAGACTCAAGGAGTaGTCCTTGCAGGTGCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: HLQPGHQMCLMAKDSSNKGRLKE*SLQVLL Trigger: GAGGAGCACCTGCAAGGAGCACTCCTTGAGTCTTCC...CTTATTAGATGAGTCCTTGGCCATTAGGCACATTTGGTGGCCTGGCTGAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGATGGGGAGGAGAGAGACACCCAGAATGCCTCTTGGGGAAGTAACTGAGTCGGGATTTAGAGGGAAATaGTGTTTCTGTTCGGCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: WMGRRETPRMPLGEVTESGFRGK*CFCSAV Trigger: GACTGCCGAACAGAAACACCATTTCCCTCTAAATCC...CGACTCAGTTACTTCCCCAAGAGGCATTCTGGGTGTCTCTCTCCTCCCCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCATCTTCAGCCAGGCCACCAAATGTGCCTAATGGCCAAGGACTCATCTAATAGCAAGGCATGTCCCTaGAGCCATGTGCCAGTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: HHLQPGHQMCLMAKDSSNSKACP*SHVPVK Trigger: TTTCACTGGCACATGGCTCCAGGGACATGCCTTGCT...ATTAGATGAGTCCTTGGCCATTAGGCACATTTGGTGGCCTGGCTGAAGATGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR-3UTR CCA 90 bp | GATCAGAGCTTCTATACCAAGGAGAATGAATGTCTACTCCTCTGGGCCTCAAGCGGTGTCACAGGACAGTaGGAAGAGAACAGTGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: DQSFYTKENECLLLWASSGVTGQ*EENSAE Trigger: CTCTGCACTGTTCTCTTCCCACTGTCCTGTGACACC...GCTTGAGGCCCAGAGGAGTAGACATTCATTCTCCTTGGTATAGAAGCTCTGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR-3UTR TCA 90 bp | GAACTTCTGCTATCCCCAAAGTCCACAGATCAGAGCTTCTATACCAAGGAGAATCAGTGCAGAGAAAGGTaGGGGGACAGCAAGGCATGT | + |
|
Preference number: 2 (lower is better) Translates to: ELLLSPKSTDQSFYTKENQCRER*GDSKAC Trigger: ACATGCCTTGCTGTCCCCTCACCTTTCTCTGCACTG...ATTCTCCTTGGTATAGAAGCTCTGATCTGTGGACTTTGGGGATAGCAGAAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTCCACAGATCAGAGCTTCTATACCAAGGAGAATGAATGTCTACTCCTCTGGGCCAGGCCACCAAATGTaGCTAATGGCCAAGGACTCA | + |
|
Preference number: 2 (lower is better) Translates to: SPQIRASIPRRMNVYSSGPGHQM*LMAKDS Trigger: TGAGTCCTTGGCCATTAGGCACATTTGGTGGCCTGG...CCCAGAGGAGTAGACATTCATTCTCCTTGGTATAGAAGCTCTGATCTGTGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTGCCTGGAAACTCCCAAGTGAAAGTAATCCAGCTGCTTCCCCATCCTTCCACAGTGTCTGTGCCCACTaGTATCAAATAAAAGCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PAWKLPSESNPAASPSFHSVCAH*YQIKAL Trigger: CAGAGCTTTTATTTGATAGCAGTGGGCACAGACACT...GTGGAAGGATGGGGAAGCAGCTGGATTACTTTCACTTGGGAGTTTCCAGGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000133807.2 |
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| 3UTR-3UTR CCA 90 bp | AACTTGCTTTACTCCAAAAGTAACCCAGTCAACAAACAAACCAGGGGTGGGTGCAGCAAGGCATGTCCCTaGAGCCATGTGCCAGTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: NLLYSKSNPVNKQTRGGCSKACP*SHVPVK Trigger: TTTCACTGGCACATGGCTCCAGGGACATGCCTTGCT...GCACCCACCCCTGGTTTGTTTGTTGACTGGGTTACTTTTGGAGTAAAGCAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR-3UTR CCA 90 bp | AACTTGCTTTACTCCAAAAGTAACCCAGTCAACAAACAAACCAGGGGTGGGTGCGGTGTCACAGGACAGTaGGAAGAGAACAGTGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: NLLYSKSNPVNKQTRGGCGVTGQ*EENSAE Trigger: CTCTGCACTGTTCTCTTCCCACTGTCCTGTGACACC...GCACCCACCCCTGGTTTGTTTGTTGACTGGGTTACTTTTGGAGTAAAGCAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR-3UTR CCA 90 bp | TCACCCCATGGCTGCCTAGCACAAAATGGATTCCCTAGTGAAGTACAATCTCACGGATTTTTCTCCTCCTaGGAGGTAGACAGGTCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: SPHGCLAQNGFPSEVQSHGFFSS*EVDRSY Trigger: GTAAGACCTGTCTACCTCCCAGGAGGAGAAAAATCC...GTGAGATTGTACTTCACTAGGGAATCCATTTTGTGCTAGGCAGCCATGGGGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| 3UTR-3UTR TCA 90 bp | AAAATACCTGATGTCTACATTAGTCTTTTCCACTCTCATGCACACCCACCTGTAGTCTCGCCAGATATGTaGGCTCCAGGCTCAGTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KIPDVYISLFHSHAHPPVVSPDM*APGSVR Trigger: TCTCACTGAGCCTGGAGCTCACATATCTGGCGAGAC...TACAGGTGGGTGTGCATGAGAGTGGAAAAGACTAATGTAGACATCAGGTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGAAAGTAATCCAGCTGCTTCCCCATCCTTCCACTAGTAGGACACTTGTGAATTACAGTGAGTACTaGTGTCTAGCCAGGCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: QVKVIQLLPHPSTSRTLVNYSEY*CLARLS Trigger: TGAGAGCCTGGCTAGACAGCAGTACTCACTGTAATT...CACAAGTGTCCTACTAGTGGAAGGATGGGGAAGCAGCTGGATTACTTTCACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAAACAGGTGGATTCCTACAGCTCACTGGCTTTGGCAGTCTCGCCAGATATGTCAAGTAGAAAATGACTaGGGAAAATACCTGATGTCT | + |
|
Preference number: 2 (lower is better) Translates to: GNRWIPTAHWLWQSRQICQVEND*GKYLMS Trigger: AGACATCAGGTATTTTCCTCAGTCATTTTCTACTTG...ACATATCTGGCGAGACTGCCAAAGCCAGTGAGCTGTAGGAATCCACCTGTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
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| 3UTR-3UTR GCA 90 bp | ATGACAACACATCTTAAAAATCCAAAGAAAGCCAGGTATGGTGGTGCACATCTTCCATACAAACCCAGGTaGTTTGGGGCTGCTGAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: MTTHLKNPKKARYGGAHLPYKPR*FGAAEV Trigger: CACCTCAGCAGCCCCAAAGCACCTGGGTTTGTATGG...AAGATGTGCACCACCATACCTGGCTTTCTTTGGATTTTTAAGATGTGTTGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
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| 3UTR-3UTR GCA 90 bp | GATGTCTACATTAGTCTTTTCCACTCTCATGCACACCCACCTGTATGTACGCATAATTACAGTGAGTACTaGTGTCTAGCCAGGCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: DVYISLFHSHAHPPVCTHNYSEY*CLARLS Trigger: TGAGAGCCTGGCTAGACAGCAGTACTCACTGTAATT...ATGCGTACATACAGGTGGGTGTGCATGAGAGTGGAAAAGACTAATGTAGACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
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| 3UTR-3UTR GCA 90 bp | GTTCAAGGCCAGCCAGGTCTACATAATAAGACCATCTCAAATACAGAGGGAAAGTCTTTTCCACTCTCATaGACACCCACCTGTATGTAC | + |
|
Preference number: 2 (lower is better) Translates to: VQGQPGLHNKTISNTEGKSFPLS*TPTCMY Trigger: GTACATACAGGTGGGTGTGCATGAGAGTGGAAAAGA...CTTTCCCTCTGTATTTGAGATGGTCTTATTATGTAGACCTGGCTGGCCTTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGGTAATTCCACACCTGGAAACGTCTCCTAAGGATGGCATCATGGTTAGCTTGATGAGTCAGTGTCTGTaGCCACTGCTATCAAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: LVIPHLETSPKDGIMVSLMSQCL*PLLSNK Trigger: TTTATTTGATAGCAGTGGGCACAGACACTGACTCAT...CAAGCTAACCATGATGCCATCCTTAGGAGACGTTTCCAGGTGTGGAATTACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
||
| 3UTR GCA 72 bp | GGGACCTTCCAGCAGCCCTCTGGCCACTCCCAAGGTTaGTCTTCTGCCCAGGATGCTGCATCCTGGGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GTFQQPSGHSQG*SSAQDAASWEC Trigger: GCACTCCCAGGATGCAGCATCCTGGGCAGAAGAGCAACCTTGGGAGTGGCCAGAGGGCTGCTGGAAGGTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
||
| 3UTR CCA 72 bp | TACCCGAGAAGGGGCCAAGTCTGTGTAGGGTGGGTCTaGTCTCTGCCCAGCTCTCCAAAGGCTCCAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: YPRRGQVCVGWV*SLPSSPKAPGC Trigger: GCAGCCTGGAGCCTTTGGAGAGCTGGGCAGAGACCAGACCCACCCTACACAGACTTGGCCCCTTCTCGGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
||
| 3UTR CCA 72 bp | TGGGCTGGACAGTGCCCATGGTCAGAGTCAAAGCAATaGGCTCCAGAGCCACTGTGCCATGGGACTGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: WAGQCPWSESKQ*APEPLCHGTAK Trigger: CTTGGCAGTCCCATGGCACAGTGGCTCTGGAGCCCATTGCTTTGACTCTGACCATGGGCACTGTCCAGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR CCA 72 bp | CTCTGGGCCTCAAGCCCTGAGAAGCTAAGGATTCCCTaGAGACTCAGTGACTCCAGGGCTGGGTTCCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: LWASSPEKLRIP*RLSDSRAGFHG Trigger: TCCATGGAACCCAGCCCTGGAGTCACTGAGTCTCCAGGGAATCCTTAGCTTCTCAGGGCTTGAGGCCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAATGGGCTCCAGAGCCACTGTGCCATGGGACTGCCAAGAACCTCAGGACTTGGCAGGGCTCAGCACTaGACACATCATCTTCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SNGLQSHCAMGLPRTSGLGRAQH*THHLQP Trigger: TGGCTGAAGATGATGTGTCAAGTGCTGAGCCCTGCC...AAGTCCTGAGGTTCTTGGCAGTCCCATGGCACAGTGGCTCTGGAGCCCATTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR TCA 72 bp | GGGACAGCAAGGCATGTCCCTGGAGCCATGTGCCAGTaGAACAGCTCTCCTTGTCCCAACCATGCAGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GTARHVPGAMCQ*NSSPCPNHAGL Trigger: TAAGCCTGCATGGTTGGGACAAGGAGAGCTGTTTCACTGGCACATGGCTCCAGGGACATGCCTTGCTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR TCA 72 bp | TGGAGCCCCATACAAACCCAGGTGCTTTGGGGCTGCTaGGGTGGAAACAGGTGGATTCCTACAGCTCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: WSPIQTQVLWGC*GGNRWIPTAHW Trigger: CCAGTGAGCTGTAGGAATCCACCTGTTTCCACCTCAGCAGCCCCAAAGCACCTGGGTTTGTATGGGGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
||
| 3UTR CCA 72 bp | GAATTCTACTGTGGAGGCAGGAGGCCTGGGCAGAACTaGCCCAAGTCCATGCCTACCCAAGTAACCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: EFYCGGRRPGQN*PKSMPTQVTRG Trigger: TCCTCTGGTTACTTGGGTAGGCATGGACTTGGGCCAGTTCTGCCCAGGCCTCCTGCCTCCACAGTAGAATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGTTTGGAGCCCCATACAAACCCAGGTGCTTTGGGGCTGCTGAGGTGGAAACCACTAGTAGGACACTaGTGTGGCCATAGCTGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: ACLEPHTNPGALGLLRWKPLVGH*CGHSCH Trigger: ATGGCAGCTATGGCCACACAAGTGTCCTACTAGTGG...TTTCCACCTCAGCAGCCCCAAAGCACCTGGGTTTGTATGGGGCTCCAAACAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
||
| 3UTR TCA 72 bp | AAGGAGCCACAGAAGACACCCAGACACAGACAAGAATaGGGCCTAGTCTGGGCTGGACAGTGCCCATGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KEPQKTPRHRQE*GLVWAGQCPWS Trigger: TGACCATGGGCACTGTCCAGCCCAGACTAGGCCTCATTCTTGTCTGTGTCTGGGTGTCTTCTGTGGCTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR GCA 72 bp | GAGGCACAGGAAGACTCAAGGAGTGCTCCTTGCAGGTaGTCCTCTCCCAGGCCATTTAACAGAGCTGACACT | + |
|
Preference number: 3 (lower is better) Translates to: EAQEDSRSAPCR*SSPRPFNRADT Trigger: AGTGTCAGCTCTGTTAAATGGCCTGGGAGAGGAGCACCTGCAAGGAGCACTCCTTGAGTCTTCCTGTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
||
| 3UTR GCA 72 bp | AACAGGGAGGCACAGGAAGACTCAAGGAGTGCTCCTTaGAGGTGCTCCTCTCCCAGGCCATTTAACAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NREAQEDSRSAP*RCSSPRPFNRA Trigger: AGCTCTGTTAAATGGCCTGGGAGAGGAGCACCTGCAAGGAGCACTCCTTGAGTCTTCCTGTGCCTCCCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
||
| 3UTR GCA 72 bp | GGTTGCTCTTCTGCCCAGGATGCTGCATCCTGGGAGTaGTGTAGATTCTCAAGTGAGCAGCCATCTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GCSSAQDAASWE*CRFSSEQPSLL Trigger: CAGGAGAGATGGCTGCTCACTTGAGAATCTACAGCACTCCCAGGATGCAGCATCCTGGGCAGAAGAGCAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
||
| 3UTR CCA 72 bp | ACCCAGACACAGACAAGAATGAGGCCTAGTCTGGGCTaGACAGTGCCCATGGTCAGAGTCAAAGCAATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TQTQTRMRPSLG*TVPMVRVKAMG Trigger: GCCCATTGCTTTGACTCTGACCATGGGCACTGTCCAGCCCAGACTAGGCCTCATTCTTGTCTGTGTCTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR CCA 72 bp | GGTGGAAACAGGTGGATTCCTACAGCTCACTGGCTTTaGCAGTCTCGCCAGATATGTGAGCTCCAGGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GGNRWIPTAHWL*QSRQICELQAQ Trigger: CTGAGCCTGGAGCTCACATATCTGGCGAGACTGCCAAAGCCAGTGAGCTGTAGGAATCCACCTGTTTCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
||
| 3UTR GCA 72 bp | CATGTGCCAGTGAAACAGCTCTCCTTGTCCCAACCATaGAGGCTTACTCTCTGTGCTCTGGTACCCGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HVPVKQLSLSQP*RLTLCALVPEK Trigger: CTTCTCGGGTACCAGAGCACAGAGAGTAAGCCTGCATGGTTGGGACAAGGAGAGCTGTTTCACTGGCACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR GCA 72 bp | GGAGGCCCCCAGGTATTACATTTATCTCAGAAGTGCTaGAGTCCGACACGCTGCACTTGCCAGAACCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GGPQVLHLSQKC*SPTRCTCQNQR Trigger: TCTCTGGTTCTGGCAAGTGCAGCGTGTCGGACTGCAGCACTTCTGAGATAAATGTAATACCTGGGGGCCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
||
| 3UTR CCA 72 bp | TTCTGCCACTCCCCAGTTCAGCATGGCCAGGCTCTCTaGAGAACTTCTGCTATCCCCAAAGTCCACAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: FCHSPVQHGQAL*RTSAIPKVHRS Trigger: TGATCTGTGGACTTTGGGGATAGCAGAAGTTCTCCAGAGAGCCTGGCCATGCTGAACTGGGGAGTGGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR CCA 72 bp | AATTACAGTGAGTACTGCTGTCTAGCCAGGCTCTCATaGGAAAGCCCTTCCTCGGAGGCCCCCAGGTATTAC | + |
|
Preference number: 3 (lower is better) Translates to: NYSEYCCLARLS*ESPSSEAPRYY Trigger: GTAATACCTGGGGGCCTCCGAGGAAGGGCTTTCCCATGAGAGCCTGGCTAGACAGCAGTACTCACTGTAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
||
| 3UTR CCA 72 bp | TCCCAAGGTTGCTCTTCTGCCCAGGATGCTGCATCCTaGGAGTGCTGTAGATTCTCAAGTGAGCAGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: SQGCSSAQDAAS*ECCRFSSEQPS Trigger: AGATGGCTGCTCACTTGAGAATCTACAGCACTCCCAGGATGCAGCATCCTGGGCAGAAGAGCAACCTTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
||
| 3UTR TCA 72 bp | TACAGCTCACTGGCTTTGGCAGTCTCGCCAGATATGTaGGCTCCAGGCTCAGTGAGAGAGCCTGTCTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: YSSLALAVSPDM*APGSVREPVSK Trigger: TTTAGAGACAGGCTCTCTCACTGAGCCTGGAGCTCACATATCTGGCGAGACTGCCAAAGCCAGTGAGCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
||
| 3UTR-3UTR CAA 90 bp | CTACAACCTGCCTGGAAACTCCCAAGTGAAAGTAATCCAGCTGCTTCCCCATCCCCACTAGTAGGACACTaGTGTGGCCATAGCTGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LQPAWKLPSESNPAASPSPLVGH*CGHSCH Trigger: ATGGCAGCTATGGCCACACAAGTGTCCTACTAGTGG...GGATGGGGAAGCAGCTGGATTACTTTCACTTGGGAGTTTCCAGGCAGGTTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000133807.2 |
||
| 3UTR GCA 72 bp | CCCAGTTCAGCATGGCCAGGCTCTCTGGAGAACTTCTaGTATCCCCAAAGTCCACAGATCAGAGCTTCTATA | + |
|
Preference number: 3 (lower is better) Translates to: PSSAWPGSLENF*YPQSPQIRASI Trigger: TATAGAAGCTCTGATCTGTGGACTTTGGGGATAGCAGAAGTTCTCCAGAGAGCCTGGCCATGCTGAACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR CCA 72 bp | TGGAAACGTCTCCTAAGGATGGCATCATGGTTAGCTTaGCCGACAGATGTTCACCAGACTCGACTGACACCA | + |
|
Preference number: 3 (lower is better) Translates to: WKRLLRMASWLA*PTDVHQTRLTP Trigger: TGGTGTCAGTCGAGTCTGGTGAACATCTGTCGGCCAAGCTAACCATGATGCCATCCTTAGGAGACGTTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
||
| 3UTR GCA 72 bp | TCTGAGGGCCTCCACCTTTATACCTCACCCCATGGCTaGCTAGCACAAAATGGATTCCCTAGTGAAGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: SEGLHLYTSPHG*LAQNGFPSEVQ Trigger: TTGTACTTCACTAGGGAATCCATTTTGTGCTAGGCAGCCATGGGGTGAGGTATAAAGGTGGAGGCCCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR CCA 72 bp | AGCTTCTATACCAAGGAGAATGAATGTCTACTCCTCTaGGCCTCAAGCCCTGAGAAGCTAAGGATTCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SFYTKENECLLL*ASSPEKLRIPW Trigger: CCAGGGAATCCTTAGCTTCTCAGGGCTTGAGGCCCAGAGGAGTAGACATTCATTCTCCTTGGTATAGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR CCA 72 bp | TACACTATTACATTTCTGCCACTCCCCAGTTCAGCATaGCCAGGCTCTCTGGAGAACTTCTGCTATCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: YTITFLPLPSSA*PGSLENFCYPQ Trigger: TTGGGGATAGCAGAAGTTCTCCAGAGAGCCTGGCCATGCTGAACTGGGGAGTGGCAGAAATGTAATAGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR TCA 72 bp | CCTAGTGAAGTACAATCTCACCATACATGTAGCCTTTaGATTCTACTGTGGAGGCAGGAGGCCTGGGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSEVQSHHTCSL*ILLWRQEAWAE Trigger: TTCTGCCCAGGCCTCCTGCCTCCACAGTAGAATTCAAAGGCTACATGTATGGTGAGATTGTACTTCACTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR CCA 72 bp | GGCAGGTACTGGGTCCCATTCTTTAGCACCTGTTATTaGATGAGTCAGTGTCTGTGCCCACTGCTATCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GRYWVPFFSTCY*MSQCLCPLLSN Trigger: ATTTGATAGCAGTGGGCACAGACACTGACTCATCCAATAACAGGTGCTAAAGAATGGGACCCAGTACCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000133807.2 |
||
| 3UTR TCA 72 bp | GGATTTTTCTCCTCCTGGGAGGTAGACAGGTCTTACTaGGAACATAGGCTCCAACATATACAGACACACATA | + |
|
Preference number: 3 (lower is better) Translates to: GFFSSWEVDRSY*EHRLQHIQTHI Trigger: TATGTGTGTCTGTATATGTTGGAGCCTATGTTCTCAGTAAGACCTGTCTACCTCCCAGGAGGAGAAAAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR TCA 72 bp | AGGCTTCACCATGCCTACACATACATTAGCAAATGCTaGTGTACACATATCCACTACAACCTGCCTGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RLHHAYTYISKC*CTHIHYNLPGN Trigger: GTTTCCAGGCAGGTTGTAGTGGATATGTGTACATCAGCATTTGCTAATGTATGTGTAGGCATGGTGAAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
||
| 3UTR GCA 72 bp | GATCTTAATGACAATATTGGTAATTACAGTGAGTACTaGTGTCTAGCCAGGCTCTCATGGGAAAGCCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: DLNDNIGNYSEY*CLARLSWESPS Trigger: GGAAGGGCTTTCCCATGAGAGCCTGGCTAGACAGCAGTACTCACTGTAATTACCAATATTGTCATTAAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
||
| 3UTR GCA 72 bp | TTCTTTAGCACCTGTTATTGGATGAGTCAGTGTCTGTaGCCACTGCTATCAAATAAAAGCTCTGTAGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FFSTCYWMSQCL*PLLSNKSSVEE Trigger: TTCTTCTACAGAGCTTTTATTTGATAGCAGTGGGCACAGACACTGACTCATCCAATAACAGGTGCTAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000133807.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCCTGGAGCCATGTGCCAGTGAAACAGCTCTCCTTGTCCCAACCATGCAGGCATACAGCACCCCCGTaGCAAAGGCGATGGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: CPWSHVPVKQLSLSQPCRHTAPP*QRRWHC Trigger: GCAATGCCATCGCCTTTGCCACGGGGGTGCTGTATG...CCTGCATGGTTGGGACAAGGAGAGCTGTTTCACTGGCACATGGCTCCAGGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| 3UTR CAA 72 bp | TCCAGCTGCTTCCCCATCCTTCCACTAGTAGGACACTaGTGTGGCCATAGCTGCCATCTGAGCTCGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSCFPILPLVGH*CGHSCHLSSGR Trigger: CCTCCCCGAGCTCAGATGGCAGCTATGGCCACACAAGTGTCCTACTAGTGGAAGGATGGGGAAGCAGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000133807.2 |
||
| CDS-3UTR GCA 90 bp | AGCAATGGGCTCCAGAGCCACTGTGCCATGGGACTGCCAAGAACCTCAGGACTTCATCCACACGCCAGCTaGGATGTTCAGAGGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SNGLQSHCAMGLPRTSGLHPHAS*DVQRVD Trigger: ATCCACCCTCTGAACATCGCAGCTGGCGTGTGGATG...AAGTCCTGAGGTTCTTGGCAGTCCCATGGCACAGTGGCTCTGGAGCCCATTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCCTGGAGCCATGTGCCAGTGAAACAGCTCTCCTTGTCCCAACCATGCAGGGCAAACTCCACAAACTaGCAGCAGAAGGGAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CPWSHVPVKQLSLSQPCRANSTN*QQKGAS Trigger: CGAGGCTCCCTTCTGCTGCCAGTTTGTGGAGTTTGC...CCTGCATGGTTGGGACAAGGAGAGCTGTTTCACTGGCACATGGCTCCAGGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTCTCCTTGTCCCAACCATGCAGGCTTACTCTCTGTGCTCTGGTACCCGAGGCAAACTCCACAAACTaGCAGCAGAAGGGAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QLSLSQPCRLTLCALVPEANSTN*QQKGAS Trigger: CGAGGCTCCCTTCTGCTGCCAGTTTGTGGAGTTTGC...CTCGGGTACCAGAGCACAGAGAGTAAGCCTGCATGGTTGGGACAAGGAGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCCCTGGAGCCATGTGCCAGTGAAACAGCTCTCCTTGTCCCAACCATGCAGCATACAGCACCCCCGTaGCAAAGGCGATGGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: MSLEPCASETALLVPTMQHTAPP*QRRWHC Trigger: GCAATGCCATCGCCTTTGCCACGGGGGTGCTGTATG...CTGCATGGTTGGGACAAGGAGAGCTGTTTCACTGGCACATGGCTCCAGGGACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGCTGCTTCCCCATCCTTCCACTAGTAGGACACTTGTGTGGCCATAGCTGCCATCCACACGCCAGCTaGGATGTTCAGAGGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSCFPILPLVGHLCGHSCHPHAS*DVQRVD Trigger: ATCCACCCTCTGAACATCGCAGCTGGCGTGTGGATG...GCAGCTATGGCCACACAAGTGTCCTACTAGTGGAAGGATGGGGAAGCAGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000133807.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCATAGCTGCCATCTGAGCTCGGGGAGGCAGGTACTGGGTCCCATTCTTGAGTTGCTTGTGTTCTaGCCACTGCAAAACCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CGHSCHLSSGRQVLGPILELLVF*PLQNPS Trigger: TGAGGGGTTTTGCAGTGGCCAGAACACAAGCAACTC...AAGAATGGGACCCAGTACCTGCCTCCCCGAGCTCAGATGGCAGCTATGGCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCTCGGAGGCCCCCAGGTATTACATTTATCTCAGAAGTGCTGCAGTCCGACCATCCACACGCCAGCTaGGATGTTCAGAGGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPRRPPGITFISEVLQSDHPHAS*DVQRVD Trigger: ATCCACCCTCTGAACATCGCAGCTGGCGTGTGGATG...GTCGGACTGCAGCACTTCTGAGATAAATGTAATACCTGGGGGCCTCCGAGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
||
| CDS-3UTR CCA 90 bp | CTACAACCTGCCTGGAAACTCCCAAGTGAAAGTAATCCAGCTGCTTCCCCATCCGCAAACTCCACAAACTaGCAGCAGAAGGGAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LQPAWKLPSESNPAASPSANSTN*QQKGAS Trigger: CGAGGCTCCCTTCTGCTGCCAGTTTGTGGAGTTTGC...GGATGGGGAAGCAGCTGGATTACTTTCACTTGGGAGTTTCCAGGCAGGTTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000133807.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTGCTTCCCCATCCTTCCACTAGTAGGACACTTGTGTGGCCATAGCTGCGATGGCACAGGCTTCTaGTTTTTCTTTGTCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSCFPILPLVGHLCGHSCDGTGF*FFFVSG Trigger: GCCGCTGACAAAGAAAAACCAGAAGCCTGTGCCATC...GCAGCTATGGCCACACAAGTGTCCTACTAGTGGAAGGATGGGGAAGCAGCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
||
| CDS-3UTR CCA 90 bp | CCATTTAACAGAGCTGACACTCAGTCTTCTCCAGAATTCACAGACCCCAACGGCGCAAACTCCACAAACTaGCAGCAGAAGGGAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PFNRADTQSSPEFTDPNGANSTN*QQKGAS Trigger: CGAGGCTCCCTTCTGCTGCCAGTTTGTGGAGTTTGC...GCCGTTGGGGTCTGTGAATTCTGGAGAAGACTGAGTGTCAGCTCTGTTAAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114007.8 |
||
| CDS-3UTR CCA 90 bp | CATCATCTTCAGCCAGGCCACCAAATGTGCCTAATGGCCAAGGACTCATCTAATCATACAGCACCCCCGTaGCAAAGGCGATGGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: HHLQPGHQMCLMAKDSSNHTAPP*QRRWHC Trigger: GCAATGCCATCGCCTTTGCCACGGGGGTGCTGTATG...ATTAGATGAGTCCTTGGCCATTAGGCACATTTGGTGGCCTGGCTGAAGATGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGGTATTACATTTATCTCAGAAGTGCTGCAGTCCGACACGCTGCACTTGCCGCGATGTTCAGAGGGTaGATAGTGACGCAGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRYYIYLRSAAVRHAALAAMFRG*IVTQLK Trigger: CTTCAACTGCGTCACTATCCACCCTCTGAACATCGC...GGCAAGTGCAGCGTGTCGGACTGCAGCACTTCTGAGATAAATGTAATACCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
||
| CDS-3UTR CCA 90 bp | GAAACAGGTGGATTCCTACAGCTCACTGGCTTTGGCAGTCTCGCCAGATATGTGGCGATGTTCAGAGGGTaGATAGTGACGCAGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ETGGFLQLTGFGSLARYVAMFRG*IVTQLK Trigger: CTTCAACTGCGTCACTATCCACCCTCTGAACATCGC...CACATATCTGGCGAGACTGCCAAAGCCAGTGAGCTGTAGGAATCCACCTGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
||
| CDS-3UTR CCA 90 bp | TCCCAAGTGAAAGTAATCCAGCTGCTTCCCCATCCTTCCACTAGTAGGACACTTGCAAACTCCACAAACTaGCAGCAGAAGGGAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SQVKVIQLLPHPSTSRTLANSTN*QQKGAS Trigger: CGAGGCTCCCTTCTGCTGCCAGTTTGTGGAGTTTGC...AAGTGTCCTACTAGTGGAAGGATGGGGAAGCAGCTGGATTACTTTCACTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000133807.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCACAGATCAGAGCTTCTATACCAAGGAGAATGAATGTCTACTCCTCTGGGCATCCACACGCCAGCTaGGATGTTCAGAGGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPQIRASIPRRMNVYSSGHPHAS*DVQRVD Trigger: ATCCACCCTCTGAACATCGCAGCTGGCGTGTGGATG...CCCAGAGGAGTAGACATTCATTCTCCTTGGTATAGAAGCTCTGATCTGTGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| CDS-3UTR CCA 90 bp | CATCATCTTCAGCCAGGCCACCAAATGTGCCTAATGGCCAAGGACTCATCTAATGCGATGTTCAGAGGGTaGATAGTGACGCAGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HHLQPGHQMCLMAKDSSNAMFRG*IVTQLK Trigger: CTTCAACTGCGTCACTATCCACCCTCTGAACATCGC...ATTAGATGAGTCCTTGGCCATTAGGCACATTTGGTGGCCTGGCTGAAGATGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| CDS-3UTR CCA 90 bp | AGGTACTGGGTCCCATTCTTTAGCACCTGTTATTGGATGAGTCAGTGTCTGTGCGCGATGTTCAGAGGGTaGATAGTGACGCAGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RYWVPFFSTCYWMSQCLCAMFRG*IVTQLK Trigger: CTTCAACTGCGTCACTATCCACCCTCTGAACATCGC...GCACAGACACTGACTCATCCAATAACAGGTGCTAAAGAATGGGACCCAGTACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000133807.2 |
||
| 3UTR CAA 72 bp | TTTATCTCAGAAGTGCTGCAGTCCGACACGCTGCACTaGCCAGAACCAGAGAAGTGTGGATTTAGAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FISEVLQSDTLH*PEPEKCGFRGK Trigger: TTTCCCTCTAAATCCACACTTCTCTGGTTCTGGCAAGTGCAGCGTGTCGGACTGCAGCACTTCTGAGATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
||
| CDS-3UTR TCA 90 bp | CAAGTGAAAGTAATCCAGCTGCTTCCCCATCCTTCCACTAGTAGGACACTTGTGTGCGTCTCTTTTCCTTaGGGAGTTGCTTGTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVKVIQLLPHPSTSRTLVCVSFP*GVACVL Trigger: CAGAACACAAGCAACTCCTCAAGGAAAAGAGACGCA...CACAAGTGTCCTACTAGTGGAAGGATGGGGAAGCAGCTGGATTACTTTCACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
||
| CDS-3UTR CCA 90 bp | ATACCTGATGTCTACATTAGTCTTTTCCACTCTCATGCACACCCACCTGTATGTGCAAACTCCACAAACTaGCAGCAGAAGGGAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: IPDVYISLFHSHAHPPVCANSTN*QQKGAS Trigger: CGAGGCTCCCTTCTGCTGCCAGTTTGTGGAGTTTGC...ACATACAGGTGGGTGTGCATGAGAGTGGAAAAGACTAATGTAGACATCAGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
||
| CDS-3UTR CCA 90 bp | GAACTTCTGCTATCCCCAAAGTCCACAGATCAGAGCTTCTATACCAAGGAGAATGCGATGTTCAGAGGGTaGATAGTGACGCAGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELLLSPKSTDQSFYTKENAMFRG*IVTQLK Trigger: CTTCAACTGCGTCACTATCCACCCTCTGAACATCGC...ATTCTCCTTGGTATAGAAGCTCTGATCTGTGGACTTTGGGGATAGCAGAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| CDS-3UTR GCA 90 bp | ATGACAACACATCTTAAAAATCCAAAGAAAGCCAGGTATGGTGGTGCACATCTTCATCCACACGCCAGCTaGGATGTTCAGAGGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: MTTHLKNPKKARYGGAHLHPHAS*DVQRVD Trigger: ATCCACCCTCTGAACATCGCAGCTGGCGTGTGGATG...AAGATGTGCACCACCATACCTGGCTTTCTTTGGATTTTTAAGATGTGTTGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
||
| 3UTR CAA 72 bp | AGGAATGGCATCATTTTTATGACAATACTGAAGATGTaGAAACCACAGCAAGTCAAAAAGAGCAGGTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RNGIIFMTILKM*KPQQVKKSRYK Trigger: TTTGTACCTGCTCTTTTTGACTTGCTGTGGTTTCAACATCTTCAGTATTGTCATAAAAATGATGCCATTCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
||
| CDS GCA 90 bp | CAGGCGGCACAGCCAGCGGTACCACCAAGTCATGCCCTCTTCCTGTaGCGGCGGGGCTGGGCCCGCGGCCGCTCCGGCGGCGCCCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QAAQPAVPPSHALFL*RRGWARGRSGGARA Trigger: GGCTCGGGCGCCGCCGGAGCGGCCGCGGGCCCAGCCCCGCCGGCACAGGAAGAGGGCATGACTTGGTGGTACCGCTGGCTGTGCCGCCTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 ENSMUST00000114006.8 ENSMUST00000114007.8 |
||
| CDS-3UTR CAA 90 bp | GGACACTTGTGTGGCCATAGCTGCCATCTGAGCTCGGGGAGGCAGGTACTGGGTTGGATAGTGACGCAGTaGAAGAGTCCAGAGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GHLCGHSCHLSSGRQVLGWIVTQ*KSPEMA Trigger: TGCCATCTCTGGACTCTTCAACTGCGTCACTATCCA...ACCCAGTACCTGCCTCCCCGAGCTCAGATGGCAGCTATGGCCACACAAGTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000133807.2 |
||
| CDS-3UTR CAA 90 bp | GAGAAGCTAAGGATTCCCTGGAGACTCAGTGACTCCAGGGCTGGGTTCCATGGAATGGCATCGCCCTTTTaGCCCAGGGCAGACAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EKLRIPWRLSDSRAGFHGMASPF*PRADSP Trigger: TGGACTGTCTGCCCTGGGCAAAAAGGGCGATGCCAT...TCCATGGAACCCAGCCCTGGAGTCACTGAGTCTCCAGGGAATCCTTAGCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| CDS-3UTR CAA 90 bp | CATGCCTACCCAAGTAACCAGAGGAGCAGGTGGGGATTTTTCTCCTCCTGGGAGATGGCATCGCCCTTTTaGCCCAGGGCAGACAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: HAYPSNQRSRWGFFSSWEMASPF*PRADSP Trigger: TGGACTGTCTGCCCTGGGCAAAAAGGGCGATGCCAT...CTCCCAGGAGGAGAAAAATCCCCACCTGCTCCTCTGGTTACTTGGGTAGGCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| CDS GCA 90 bp | CTTCTGCCAGGAGCGCAGCCGGTCAACCTTCTCAGCTACTGTGTTTaGAAACTCCACAAACTGGCAGCAGAAGGGAGCCTCGCACAACAA | + |
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Preference number: 5 (lower is better) Translates to: LLPGAQPVNLLSYCV*KLHKLAAEGSLAQQ Trigger: TTGTTGTGCGAGGCTCCCTTCTGCTGCCAGTTTGTGGAGTTTGCAAACACAGTAGCTGAGAAGGTTGACCGGCTGCGCTCCTGGCAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000114003.2 ENSMUST00000114004.8 ENSMUST00000114005.9 ENSMUST00000114006.8 ENSMUST00000114007.8 ENSMUST00000133807.2 |
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| CDS-3UTR CAA 90 bp | TACTGTGTGCTCTCCCTGCAGAAGCCTCTGAGTCCCACCAATCCTGAGGGAGGGTGGATAGTGACGCAGTaGAAGAGTCCAGAGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: YCVLSLQKPLSPTNPEGGWIVTQ*KSPEMA Trigger: TGCCATCTCTGGACTCTTCAACTGCGTCACTATCCA...CCCTCCCTCAGGATTGGTGGGACTCAGAGGCTTCTGCAGGGAGAGCACACAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 |
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| CDS-3UTR CAA 90 bp | GCCAGTGAAACAGCTCTCCTTGTCCCAACCATGCAGGCTTACTCTCTGTGCTCTATGGCATCGCCCTTTTaGCCCAGGGCAGACAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: ASETALLVPTMQAYSLCSMASPF*PRADSP Trigger: TGGACTGTCTGCCCTGGGCAAAAAGGGCGATGCCAT...AGAGCACAGAGAGTAAGCCTGCATGGTTGGGACAAGGAGAGCTGTTTCACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| CDS CCA 90 bp | AAGGCGTTCATGATCATCCACACGCCAGCTGCGATGTTCAGAGGGTaGATAGTGACGCAGTTGAAGAGTCCAGAGATGGCACAGGACACC | + |
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Preference number: 5 (lower is better) Translates to: KAFMIIHTPAAMFRG*IVTQLKSPEMAQDT Trigger: GGTGTCCTGTGCCATCTCTGGACTCTTCAACTGCGTCACTATCCACCCTCTGAACATCGCAGCTGGCGTGTGGATGATCATGAACGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| CDS-3UTR CAA 90 bp | GAGTCAAAGCAATGGGCTCCAGAGCCACTGTGCCATGGGACTGCCAAGAACCTCTGGATAGTGACGCAGTaGAAGAGTCCAGAGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: ESKQWAPEPLCHGTAKNLWIVTQ*KSPEMA Trigger: TGCCATCTCTGGACTCTTCAACTGCGTCACTATCCA...GAGGTTCTTGGCAGTCCCATGGCACAGTGGCTCTGGAGCCCATTGCTTTGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| CDS CCA 90 bp | AAGGCGTTCATGATCATCCACACGCCAGCTGCGATGTTCAGAGGGTaGATAGTGACGCAGTTGAAGAGTCCAGAGATGGCACAGGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: KAFMIIHTPAAMFRG*IVTQLKSPEMAQAS Trigger: AGAAGCCTGTGCCATCTCTGGACTCTTCAACTGCGTCACTATCCACCCTCTGAACATCGCAGCTGGCGTGTGGATGATCATGAACGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
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| CDS GCA 90 bp | GCACAACAACAGGATGAAGGCGTTCATGATCATCCACACGCCAGCTaGGATGTTCAGAGGGTGGATAGTGACGCAGTTGAAGAGTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: AQQQDEGVHDHPHAS*DVQRVDSDAVEESR Trigger: TCTGGACTCTTCAACTGCGTCACTATCCACCCTCTGAACATCGCAGCTGGCGTGTGGATGATCATGAACGCCTTCATCCTGTTGTTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 ENSMUST00000114006.8 ENSMUST00000114007.8 ENSMUST00000133807.2 |
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| CDS CCA 90 bp | GTGGATAGTGACGCAGTTGAAGAGTCCAGAGATGGCACAGGCTTCTaGTTTTTCTTTGTCAGCGGCTGTTTTCTCGGGAGGTGGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: VDSDAVEESRDGTGF*FFFVSGCFLGRWLP Trigger: AGGAAGCCACCTCCCGAGAAAACAGCCGCTGACAAAGAAAAACCAGAAGCCTGTGCCATCTCTGGACTCTTCAACTGCGTCACTATCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
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| CDS-3UTR CAA 90 bp | ACAAACAAACCAGGGGTGGGTGCAAAAGGAGCCACAGAAGACACCCAGACACAGTGGATAGTGACGCAGTaGAAGAGTCCAGAGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: TNKPGVGAKGATEDTQTQWIVTQ*KSPEMA Trigger: TGCCATCTCTGGACTCTTCAACTGCGTCACTATCCA...CTGTGTCTGGGTGTCTTCTGTGGCTCCTTTTGCACCCACCCCTGGTTTGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| CDS-3UTR CAA 90 bp | CGTCTCCTAAGGATGGCATCATGGTTAGCTTGGCCGACAGATGTTCACCAGACTTGGATAGTGACGCAGTaGAAGAGTCCAGAGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: RLLRMASWLAWPTDVHQTWIVTQ*KSPEMA Trigger: TGCCATCTCTGGACTCTTCAACTGCGTCACTATCCA...AGTCTGGTGAACATCTGTCGGCCAAGCTAACCATGATGCCATCCTTAGGAGACG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114004.8 |
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| CDS-3UTR CAA 90 bp | AGGTACTGGGTCCCATTCTTTAGCACCTGTTATTGGATGAGTCAGTGTCTGTGCGGAGGTGGCTTCCTCTaGCGTGCGTCTCTTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: RYWVPFFSTCYWMSQCLCGGGFL*RASLFL Trigger: AAGGAAAAGAGACGCACGCAAGAGGAAGCCACCTCC...GCACAGACACTGACTCATCCAATAACAGGTGCTAAAGAATGGGACCCAGTACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
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| CDS-3UTR CAA 90 bp | GGAGGCAGGTACTGGGTCCCATTCTTTAGCACCTGTTATTGGATGAGTCAGTGTTCCTTGAGGAGTTGCTaGTGTTCTGGCCACTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: GGRYWVPFFSTCYWMSQCSLRSC*CSGHCK Trigger: TTTGCAGTGGCCAGAACACAAGCAACTCCTCAAGGA...ACACTGACTCATCCAATAACAGGTGCTAAAGAATGGGACCCAGTACCTGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
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| CDS-3UTR CAA 90 bp | AGGCTTCTACCTGTTCCTGGCCCACCCACCCCACAACATTGTTTTAATCAGCAGGTGCGTCTCTTTTCCTaGAGGAGTTGCTTGTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: RLLPVPGPPTPQHCFNQQVRLFS*RSCLCS Trigger: AGAACACAAGCAACTCCTCAAGGAAAAGAGACGCAC...CTGCTGATTAAAACAATGTTGTGGGGTGGGTGGGCCAGGAACAGGTAGAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
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| CDS-3UTR CAA 90 bp | AGGTACTGGGTCCCATTCTTTAGCACCTGTTATTGGATGAGTCAGTGTCTGTGCCTTTTCCTTGAGGAGTaGCTTGTGTTCTGGCCACTG | + |
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Preference number: 5 (lower is better) Translates to: RYWVPFFSTCYWMSQCLCLFLEE*LVFWPL Trigger: CAGTGGCCAGAACACAAGCAACTCCTCAAGGAAAAG...GCACAGACACTGACTCATCCAATAACAGGTGCTAAAGAATGGGACCCAGTACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
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| CDS-3UTR CAA 90 bp | TCCCAAGTGAAAGTAATCCAGCTGCTTCCCCATCCTTCCACTAGTAGGACACTTGCTTCTGGTTTTTCTTaGTCAGCGGCTGTTTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: SQVKVIQLLPHPSTSRTLASGFS*SAAVFS Trigger: CGAGAAAACAGCCGCTGACAAAGAAAAACCAGAAGC...AAGTGTCCTACTAGTGGAAGGATGGGGAAGCAGCTGGATTACTTTCACTTGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
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| CDS GCA 72 bp | CCGCCAGGCGGCACAGCCAGCGGTACCACCAAGTCATaGCCTCTTCCTGTGCCGGCGGGGCTGGGCCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: PPGGTASGTTKS*PLPVPAGLGPR Trigger: CCGCGGGCCCAGCCCCGCCGGCACAGGAAGAGGGCATGACTTGGTGGTACCGCTGGCTGTGCCGCCTGGCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| CDS CAA 90 bp | ATCCACACGCCAGCTGCGATGTTCAGAGGGTGGATAGTGACGCAGTaGAAGAGTCCAGAGATGGCACAGGACACCGCTCCTAGCACTCCC | + |
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Preference number: 6 (lower is better) Translates to: IHTPAAMFRGWIVTQ*KSPEMAQDTAPSTP Trigger: GGGAGTGCTAGGAGCGGTGTCCTGTGCCATCTCTGGACTCTTCAACTGCGTCACTATCCACCCTCTGAACATCGCAGCTGGCGTGTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| CDS GCA 72 bp | GCTGGATCCGAGCATAAGAAATGGCATCGCCCTTTTTaGCCAGGGCAGACAGTCCATACAGCACCCCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: AGSEHKKWHRPF*PGQTVHTAPPW Trigger: CCACGGGGGTGCTGTATGGACTGTCTGCCCTGGGCAAAAAGGGCGATGCCATTTCTTATGCTCGGATCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000114003.2 ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| CDS CAA 90 bp | CCTTCTGCCAGGAGCGCAGCCGGTCAACCTTCTCAGCTACTGTGTTaGCAAACTCCACAAACTGGCAGCAGAAGGGAGCCTCGCACAACA | + |
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Preference number: 6 (lower is better) Translates to: PSARSAAGQPSQLLC*QTPQTGSRREPRTT Trigger: TGTTGTGCGAGGCTCCCTTCTGCTGCCAGTTTGTGGAGTTTGCAAACACAGTAGCTGAGAAGGTTGACCGGCTGCGCTCCTGGCAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000114003.2 ENSMUST00000114004.8 ENSMUST00000114005.9 ENSMUST00000114006.8 ENSMUST00000114007.8 ENSMUST00000133807.2 |
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| CDS GCA 72 bp | GGAGCGCAGCCGGTCAACCTTCTCAGCTACTGTGTTTaGAAACTCCACAAACTGGCAGCAGAAGGGAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GAQPVNLLSYCV*KLHKLAAEGSL Trigger: GAGGCTCCCTTCTGCTGCCAGTTTGTGGAGTTTGCAAACACAGTAGCTGAGAAGGTTGACCGGCTGCGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000114003.2 ENSMUST00000114004.8 ENSMUST00000114005.9 ENSMUST00000114006.8 ENSMUST00000114007.8 ENSMUST00000133807.2 |
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| CDS CAA 72 bp | CCAGCTGCGATGTTCAGAGGGTGGATAGTGACGCAGTaGAAGAGTCCAGAGATGGCACAGGACACCGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PAAMFRGWIVTQ*KSPEMAQDTAP Trigger: AGGAGCGGTGTCCTGTGCCATCTCTGGACTCTTCAACTGCGTCACTATCCACCCTCTGAACATCGCAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 ENSMUST00000114006.8 ENSMUST00000114007.8 |
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| CDS TCA 72 bp | GGGAGGTGGCTTCCTCTTGCGTGCGTCTCTTTTCCTTaGGGAGTTGCTTGTGTTCTGGCCACTGCAAAACCC | + |
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Preference number: 6 (lower is better) Translates to: GRWLPLACVSFP*GVACVLATAKP Trigger: GGGTTTTGCAGTGGCCAGAACACAAGCAACTCCTCAAGGAAAAGAGACGCACGCAAGAGGAAGCCACCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
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| CDS CAA 72 bp | AGGAGCGCAGCCGGTCAACCTTCTCAGCTACTGTGTTaGCAAACTCCACAAACTGGCAGCAGAAGGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: RSAAGQPSQLLC*QTPQTGSRREP Trigger: AGGCTCCCTTCTGCTGCCAGTTTGTGGAGTTTGCAAACACAGTAGCTGAGAAGGTTGACCGGCTGCGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000114003.2 ENSMUST00000114004.8 ENSMUST00000114005.9 ENSMUST00000114006.8 ENSMUST00000114007.8 ENSMUST00000133807.2 |
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| CDS CAA 72 bp | CGGGAGGTGGCTTCCTCTTGCGTGCGTCTCTTTTCCTaGAGGAGTTGCTTGTGTTCTGGCCACTGCAAAACC | + |
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Preference number: 6 (lower is better) Translates to: REVASSCVRLFS*RSCLCSGHCKT Trigger: GGTTTTGCAGTGGCCAGAACACAAGCAACTCCTCAAGGAAAAGAGACGCACGCAAGAGGAAGCCACCTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
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| CDS CAA 90 bp | ACGCAGTTGAAGAGTCCAGAGATGGCACAGGCTTCTGGTTTTTCTTaGTCAGCGGCTGTTTTCTCGGGAGGTGGCTTCCTCTTGCGTGCG | + |
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Preference number: 6 (lower is better) Translates to: TQLKSPEMAQASGFS*SAAVFSGGGFLLRA Trigger: CGCACGCAAGAGGAAGCCACCTCCCGAGAAAACAGCCGCTGACAAAGAAAAACCAGAAGCCTGTGCCATCTCTGGACTCTTCAACTGCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
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| CDS CAA 72 bp | TTGTCAGCGGCTGTTTTCTCGGGAGGTGGCTTCCTCTaGCGTGCGTCTCTTTTCCTTGAGGAGTTGCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: LSAAVFSGGGFL*RASLFLEELLV Trigger: CACAAGCAACTCCTCAAGGAAAAGAGACGCACGCAAGAGGAAGCCACCTCCCGAGAAAACAGCCGCTGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
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| CDS GCA 72 bp | CAGGATGAAGGCGTTCATGATCATCCACACGCCAGCTaGGATGTTCAGAGGGTGGATAGTGACGCAGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: QDEGVHDHPHAS*DVQRVDSDAVE Trigger: TTCAACTGCGTCACTATCCACCCTCTGAACATCGCAGCTGGCGTGTGGATGATCATGAACGCCTTCATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 ENSMUST00000114006.8 ENSMUST00000114007.8 ENSMUST00000133807.2 |
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| CDS CCA 72 bp | ATGATCATCCACACGCCAGCTGCGATGTTCAGAGGGTaGATAGTGACGCAGTTGAAGAGTCCAGAGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: MIIHTPAAMFRG*IVTQLKSPEMA Trigger: TGCCATCTCTGGACTCTTCAACTGCGTCACTATCCACCCTCTGAACATCGCAGCTGGCGTGTGGATGATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000114004.8 ENSMUST00000114005.9 ENSMUST00000114006.8 ENSMUST00000114007.8 ENSMUST00000133807.2 |
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| CDS CCA 72 bp | GACGCAGTTGAAGAGTCCAGAGATGGCACAGGCTTCTaGTTTTTCTTTGTCAGCGGCTGTTTTCTCGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: DAVEESRDGTGF*FFFVSGCFLGR Trigger: CCTCCCGAGAAAACAGCCGCTGACAAAGAAAAACCAGAAGCCTGTGCCATCTCTGGACTCTTCAACTGCGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
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| CDS CAA 72 bp | AAGAGTCCAGAGATGGCACAGGCTTCTGGTTTTTCTTaGTCAGCGGCTGTTTTCTCGGGAGGTGGCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: KSPEMAQASGFS*SAAVFSGGGFL Trigger: GAGGAAGCCACCTCCCGAGAAAACAGCCGCTGACAAAGAAAAACCAGAAGCCTGTGCCATCTCTGGACTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133807.2 |
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