Pregenerated sensors for CABS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007907Ensembl transcript IDs: ENSMUST00000008051.5
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAACAGACCCACTTGCAAAGTCTGTATCAGAAAAGAATGAAGATATaGGTCCTTGAGTTGCTAACCAACTGCCTAAGAAGAGTACAACAT | + |
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Preference number: 1 (lower is better) Translates to: QQTHLQSLYQKRMKI*VLELLTNCLRRVQH Trigger: ATGTTGTACTCTTCTTAGGCAGTTGGTTAGCAACTCAAGGACGCATATCTTCATTCTTTTCTGATACAGACTTTGCAAGTGGGTCTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| 3UTR TCA 90 bp | CCACTTGCAAAGTCTGTATCAGAAAAGAATGAAGATATGCGTCCTTaGGTTGCTAACCAACTGCCTAAGAAGAGTACAACATTCAACGTT | + |
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Preference number: 1 (lower is better) Translates to: PLAKSVSEKNEDMRP*VANQLPKKSTTFNV Trigger: AACGTTGAATGTTGTACTCTTCTTAGGCAGTTGGTTAGCAACTCAAGGACGCATATCTTCATTCTTTTCTGATACAGACTTTGCAAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| 3UTR-3UTR GCA 90 bp | ATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCAAAGTCTGTATCAGAGAGTTGCTAACCAACTaGCTAAGAAGAGTACAACAT | + |
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Preference number: 2 (lower is better) Translates to: IEENQPSDNRPTCKVCIRELLTN*LRRVQH Trigger: ATGTTGTACTCTTCTTAGGCAGTTGGTTAGCAACTC...TCTGATACAGACTTTGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| 3UTR-3UTR CCA 90 bp | CTGTATCAGAAAAGAATGAAGATATGCGTCCTTGAGTTGCTAACCAACTGCCTATCGTGTATGTCTATGTaGCTTCCCTTATGTTACTGG | + |
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Preference number: 2 (lower is better) Translates to: LYQKRMKICVLELLTNCLSCMSM*LPLCYW Trigger: CCAGTAACATAAGGGAAGCCACATAGACATACACGA...TAGGCAGTTGGTTAGCAACTCAAGGACGCATATCTTCATTCTTTTCTGATACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| 3UTR CAA 90 bp | TTGCAAAGTCTGTATCAGAAAAGAATGAAGATATGCGTCCTTGAGTaGCTAACCAACTGCCTAAGAAGAGTACAACATTCAACGTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: LQSLYQKRMKICVLE*LTNCLRRVQHSTFK Trigger: CTTAAACGTTGAATGTTGTACTCTTCTTAGGCAGTTGGTTAGCAACTCAAGGACGCATATCTTCATTCTTTTCTGATACAGACTTTGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| 3UTR TCA 72 bp | AAGTCTGTATCAGAAAAGAATGAAGATATGCGTCCTTaGGTTGCTAACCAACTGCCTAAGAAGAGTACAACA | + |
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Preference number: 3 (lower is better) Translates to: KSVSEKNEDMRP*VANQLPKKSTT Trigger: TGTTGTACTCTTCTTAGGCAGTTGGTTAGCAACTCAAGGACGCATATCTTCATTCTTTTCTGATACAGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| 3UTR GCA 72 bp | AGAATGAAGATATGCGTCCTTGAGTTGCTAACCAACTaGCTAAGAAGAGTACAACATTCAACGTTTAAGATC | + |
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Preference number: 3 (lower is better) Translates to: RMKICVLELLTN*LRRVQHSTFKI Trigger: GATCTTAAACGTTGAATGTTGTACTCTTCTTAGGCAGTTGGTTAGCAACTCAAGGACGCATATCTTCATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR TCA 90 bp | ATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCAAAGTCTGTATCAGAAAGGAGTCAGTGACCTaGACAGCTCCATCATCAGGA | + |
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Preference number: 4 (lower is better) Translates to: IEENQPSDNRPTCKVCIRKESVT*TAPSSG Trigger: TCCTGATGATGGAGCTGTTCAGGTCACTGACTCCTT...TCTGATACAGACTTTGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR TCA 90 bp | TGCTGTCAGAATAATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTATCATCAGGAGCATCTaGGGTGGCAGAGGAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: CCQNNLLRRISPATTDPLIIRSI*GGRGRN Trigger: GTTCCTTCCTCTGCCACCTCAGATGCTCCTGATGAT...AAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATTATTCTGACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CCA 90 bp | AATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCAAAGTCTGTACAGGAGCATCTGAGGTaGCAGAGGAAGGAACATCAG | + |
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Preference number: 4 (lower is better) Translates to: NLLRRISPATTDPLAKSVQEHLR*QRKEHQ Trigger: CTGATGTTCCTTCCTCTGCCACCTCAGATGCTCCTG...TACAGACTTTGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR TCA 90 bp | TGTCAGAATAATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCATGTCTGGAATGGTGGTaGCCTCCTTTTCAGTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: CQNNLLRRISPATTDPLACLEWW*PPFQLR Trigger: CCTCAACTGAAAAGGAGGTCACCACCATTCCAGACA...TGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATTATTCTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CCA 90 bp | ATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCAAAGTCTGTATCAGAGTCGAGAATAAATTTTaGGCGATCCATCTTCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: IEENQPSDNRPTCKVCIRVENKF*AIHLQP Trigger: TGGCTGAAGATGGATCGCCCAAAATTTATTCTCGAC...TCTGATACAGACTTTGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CCA 90 bp | ATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCAAAGTCTGTATCAGACTTAGGTTTGGAGTTTaGAGTTTCAGTTGGAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: IEENQPSDNRPTCKVCIRLRFGV*SFSWSG Trigger: ACCACTCCAACTGAAACTCCAAACTCCAAACCTAAG...TCTGATACAGACTTTGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR TCA 90 bp | TGTCAGAATAATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCATGTGCAGTCATTTACTaGAGTAACGTGGTCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: CQNNLLRRISPATTDPLACAVIY*SNVVSF Trigger: GAAGGAGACCACGTTACTTCAGTAAATGACTGCACA...TGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATTATTCTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR GCA 90 bp | ATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCAAAGTCTGTATCAGAGAACATCAGTTTCAGTaGTTTCATCTGGAAATCCAG | + |
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Preference number: 4 (lower is better) Translates to: IEENQPSDNRPTCKVCIREHQFQ*FHLEIQ Trigger: CTGGATTTCCAGATGAAAGCACTGAAACTGATGTTC...TCTGATACAGACTTTGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR GCA 90 bp | TGTCAGAATAATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCAGGACTCTGCCTCACTTaGAGTTTCTTTTTCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: CQNNLLRRISPATTDPLAGLCLT*SFFFHP Trigger: TGGATGGAAAAAGAAACTGCAAGTGAGGCAGAGTCC...TGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATTATTCTGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CCA 90 bp | TGCTGTCAGAATAATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTTTCAGTGCTTTCATCTaGAAATCCAGAGGCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: CCQNNLLRRISPATTDPLFSAFI*KSRGIL Trigger: GAGGATGCCTCTGGATTTCCAGATGAAAGCACTGAA...AAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATTATTCTGACAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CCA 90 bp | CAAAGTCTGTATCAGAAAAGAATGAAGATATGCGTCCTTGAGTTGCTAACCAACGTGAGCAGAACAGCATaGGACTCTGCCTCACTTGCA | + |
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Preference number: 4 (lower is better) Translates to: QSLYQKRMKICVLELLTNVSRTA*DSASLA Trigger: TGCAAGTGAGGCAGAGTCCCATGCTGTTCTGCTCAC...GTTGGTTAGCAACTCAAGGACGCATATCTTCATTCTTTTCTGATACAGACTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR TCA 90 bp | ATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCAAAGTCTGTATCAGAGGTAATAGTTGTTTCTaGTTTAGGAATGGTGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: IEENQPSDNRPTCKVCIRGNSCF*FRNGVV Trigger: GACAACACCATTCCTAAATCAGAAACAACTATTACC...TCTGATACAGACTTTGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR TCA 90 bp | CAAAGTCTGTATCAGAAAAGAATGAAGATATGCGTCCTTGAGTTGCTAACCAACCTTCTTTCAGCAGTTTaGAGAGACCGGAGTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QSLYQKRMKICVLELLTNLLSAV*RDRSWW Trigger: CCACCAACTCCGGTCTCTTCAAACTGCTGAAAGAAG...GTTGGTTAGCAACTCAAGGACGCATATCTTCATTCTTTTCTGATACAGACTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CCA 90 bp | TGTCAGAATAATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCAAATGTTGGTTATGTCTaGAATGGTGGTGACCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: CQNNLLRRISPATTDPLANVGYV*NGGDLL Trigger: AAGGAGGTCACCACCATTCCAGACATAACCAACATT...TGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATTATTCTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR TCA 90 bp | CAAAGTCTGTATCAGAAAAGAATGAAGATATGCGTCCTTGAGTTGCTAACCAACTGTGGTGTTCACATGTaGTTCCTCCATGACGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: QSLYQKRMKICVLELLTNCGVHM*FLHDVV Trigger: GACAACGTCATGGAGGAATCACATGTGAACACCACA...GTTGGTTAGCAACTCAAGGACGCATATCTTCATTCTTTTCTGATACAGACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CCA 90 bp | TGCTGTCAGAATAATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTTTTCAGGCAAATCTGTaGTGTTCACATGTGATTCCT | + |
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Preference number: 4 (lower is better) Translates to: CCQNNLLRRISPATTDPLFQANL*CSHVIP Trigger: AGGAATCACATGTGAACACCACAGATTTGCCTGAAA...AAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATTATTCTGACAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR TCA 90 bp | AATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCAAAGTCTGTATTTGGGCCTATCTTCTaGAACAATCAATTTGATCTC | + |
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Preference number: 4 (lower is better) Translates to: NLLRRISPATTDPLAKSVFGPIF*NNQFDL Trigger: GAGATCAAATTGATTGTTTCAGAAGATAGGCCCAAA...TACAGACTTTGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR GCA 90 bp | TGCTGTCAGAATAATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTAGTTACATTCTCTTCTaGAATGTTGGTTATGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: CCQNNLLRRISPATTDPLSYILF*NVGYVW Trigger: CCAGACATAACCAACATTGCAGAAGAGAATGTAACT...AAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATTATTCTGACAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CCA 90 bp | TGCTGTCAGAATAATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTCTCCTGTGTCAATGGTaGTTAAGAAGATATCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: CCQNNLLRRISPATTDPLLLCQW*LRRYLL Trigger: AAGAAGATATCTTCTTAACCACCATTGACACAGGAG...AAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATTATTCTGACAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CCA 90 bp | AATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCAAAGTCTGTATTTCTCCTGTGTCAATaGTGGTTAAGAAGATATCTT | + |
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Preference number: 4 (lower is better) Translates to: NLLRRISPATTDPLAKSVFLLCQ*WLRRYL Trigger: AAGATATCTTCTTAACCACCATTGACACAGGAGAAA...TACAGACTTTGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CCA 90 bp | CAAAGTCTGTATCAGAAAAGAATGAAGATATGCGTCCTTGAGTTGCTAACCAACCATCATGAGATCGTCTaGTTCTTCTTTCAGCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: QSLYQKRMKICVLELLTNHHEIV*FFFQQF Trigger: AAACTGCTGAAAGAAGAACCAGACGATCTCATGATG...GTTGGTTAGCAACTCAAGGACGCATATCTTCATTCTTTTCTGATACAGACTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS GCA 90 bp | CATCAGGAGCATCTGAGGTGGCAGAGGAAGGAACATCAGTTTCAGTaGTTTCATCTGGAAATCCAGAGGCATCCTCCACATCAGCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: HQEHLRWQRKEHQFQ*FHLEIQRHPPHQQH Trigger: GTGCTGCTGATGTGGAGGATGCCTCTGGATTTCCAGATGAAAGCACTGAAACTGATGTTCCTTCCTCTGCCACCTCAGATGCTCCTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS GCA 90 bp | CGATTCCACAGCAGTGAGCAGAACAGCATGGGACTCTGCCTCACTTaGAGTTTCTTTTTCCATCCAATCATTAGCTCCATCAGTCGATTC | + |
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Preference number: 5 (lower is better) Translates to: RFHSSEQNSMGLCLT*SFFFHPIISSISRF Trigger: GAATCGACTGATGGAGCTAATGATTGGATGGAAAAAGAAACTGCAAGTGAGGCAGAGTCCCATGCTGTTCTGCTCACTGCTGTGGAATCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS GCA 90 bp | GTCATACCTCGATTCCACAGCAGTGAGCAGAACAGCATGGGACTCTaGCTCACTTGCAGTTTCTTTTTCCATCCAATCATTAGCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: VIPRFHSSEQNSMGL*LTCSFFFHPIISSI Trigger: GATGGAGCTAATGATTGGATGGAAAAAGAAACTGCAAGTGAGGCAGAGTCCCATGCTGTTCTGCTCACTGCTGTGGAATCGAGGTATGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CAA 90 bp | ATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCAAAGTCTGTATCAGATTCTCTTCTGCAATGTaGGTTATGTCTGGAATGGTG | + |
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Preference number: 5 (lower is better) Translates to: IEENQPSDNRPTCKVCIRFSSAM*VMSGMV Trigger: CACCATTCCAGACATAACCAACATTGCAGAAGAGAA...TCTGATACAGACTTTGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CAA 90 bp | AATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCAAAGTCTGTAGTTGGTGTTTTACTGTaGTCTCTTGGAGGTCGAGAA | + |
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Preference number: 5 (lower is better) Translates to: NLLRRISPATTDPLAKSVVGVLL*SLGGRE Trigger: TTCTCGACCTCCAAGAGACAACAGTAAAACACCAAC...TACAGACTTTGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CAA 90 bp | CTGTATCAGAAAAGAATGAAGATATGCGTCCTTGAGTTGCTAACCAACTGCCTATTGAAGAGACCGGAGTaGGTGGTAGATAAGTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LYQKRMKICVLELLTNCLLKRPE*VVDKSS Trigger: GGAGGACTTATCTACCACCAACTCCGGTCTCTTCAA...TAGGCAGTTGGTTAGCAACTCAAGGACGCATATCTTCATTCTTTTCTGATACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CCA 90 bp | ACAATAAAGTCATACCTCGATTCCACAGCAGTGAGCAGAACAGCATaGGACTCTGCCTCACTTGCAGTTTCTTTTTCCATCCAATCATTA | + |
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Preference number: 5 (lower is better) Translates to: TIKSYLDSTAVSRTA*DSASLAVSFSIQSL Trigger: TAATGATTGGATGGAAAAAGAAACTGCAAGTGAGGCAGAGTCCCATGCTGTTCTGCTCACTGCTGTGGAATCGAGGTATGACTTTATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CAA 90 bp | AATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCAAAGTCTGTAAAATGTCTGCTTCCGTaGGTGTTTTACTGTTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: NLLRRISPATTDPLAKSVKCLLP*VFYCCL Trigger: GAGACAACAGTAAAACACCAACGGAAGCAGACATTT...TACAGACTTTGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CAA 90 bp | CAAAGTCTGTATCAGAAAAGAATGAAGATATGCGTCCTTGAGTTGCTAACCAACGGGACTCTGCCTCACTaGCAGTTTCTTTTTCCATCC | + |
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Preference number: 5 (lower is better) Translates to: QSLYQKRMKICVLELLTNGTLPH*QFLFPS Trigger: GGATGGAAAAAGAAACTGCAAGTGAGGCAGAGTCCC...GTTGGTTAGCAACTCAAGGACGCATATCTTCATTCTTTTCTGATACAGACTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CCA 90 bp | GTTGAAAAATCACCATCCGGTGTGCAGTCATTTACTGAAGTAACGTaGTCTCCTTCCGAGGTAATAGTTGTTTCTGATTTAGGAATGGTG | + |
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Preference number: 5 (lower is better) Translates to: VEKSPSGVQSFTEVT*SPSEVIVVSDLGMV Trigger: CACCATTCCTAAATCAGAAACAACTATTACCTCGGAAGGAGACCACGTTACTTCAGTAAATGACTGCACACCGGATGGTGATTTTTCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CAA 90 bp | TGTCAGAATAATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCACTTTCTCTGGAAGAGTaGTTAATTTCAGACAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: CQNNLLRRISPATTDPLALSLEE*LISDSL Trigger: AAGGCTGTCTGAAATTAACAACTCTTCCAGAGAAAG...TGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATTATTCTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CAA 90 bp | AATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCAAAGTCTGTAAGTTTAGTCACAGTTTaGGGCCTATCTTCTGAAACA | + |
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Preference number: 5 (lower is better) Translates to: NLLRRISPATTDPLAKSVSLVTV*GLSSET Trigger: TGTTTCAGAAGATAGGCCCAAAACTGTGACTAAACT...TACAGACTTTGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CAA 90 bp | TGTCAGAATAATTTATTGAGGAGAATCAGCCCAGCGACAACAGACCCACTTGCATCTTCCACATTATCTTaGGCTTTTTCAGCCGAGTTA | + |
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Preference number: 5 (lower is better) Translates to: CQNNLLRRISPATTDPLASSTLS*AFSAEL Trigger: TAACTCGGCTGAAAAAGCCAAAGATAATGTGGAAGA...TGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTCAATAAATTATTCTGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS-3UTR CAA 90 bp | CTGTATCAGAAAAGAATGAAGATATGCGTCCTTGAGTTGCTAACCAACTGCCTAGTAGATAAGTCCTCCTaGTCCTTAAGGGTATCTACT | + |
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Preference number: 5 (lower is better) Translates to: LYQKRMKICVLELLTNCLVDKSS*SLRVST Trigger: AGTAGATACCCTTAAGGACAAGGAGGACTTATCTAC...TAGGCAGTTGGTTAGCAACTCAAGGACGCATATCTTCATTCTTTTCTGATACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS TCA 72 bp | GTCAGTGACCTGAACAGCTCCATCATCAGGAGCATCTaGGGTGGCAGAGGAAGGAACATCAGTTTCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: VSDLNSSIIRSI*GGRGRNISFSA Trigger: AGCACTGAAACTGATGTTCCTTCCTCTGCCACCTCAGATGCTCCTGATGATGGAGCTGTTCAGGTCACTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS GCA 72 bp | AGCAGTGAGCAGAACAGCATGGGACTCTGCCTCACTTaGAGTTTCTTTTTCCATCCAATCATTAGCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: SSEQNSMGLCLT*SFFFHPIISSI Trigger: GATGGAGCTAATGATTGGATGGAAAAAGAAACTGCAAGTGAGGCAGAGTCCCATGCTGTTCTGCTCACTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CAA 72 bp | TCTGGTTCTTCTTTCAGCAGTTTGAAGAGACCGGAGTaGGTGGTAGATAAGTCCTCCTTGTCCTTAAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: SGSSFSSLKRPE*VVDKSSLSLRV Trigger: TACCCTTAAGGACAAGGAGGACTTATCTACCACCAACTCCGGTCTCTTCAAACTGCTGAAAGAAGAACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CAA 72 bp | TACATCATGAGATCGTCTGGTTCTTCTTTCAGCAGTTaGAAGAGACCGGAGTTGGTGGTAGATAAGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: YIMRSSGSSFSS*KRPELVVDKSS Trigger: GGAGGACTTATCTACCACCAACTCCGGTCTCTTCAAACTGCTGAAAGAAGAACCAGACGATCTCATGATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CAA 72 bp | TTGAAGAGACCGGAGTTGGTGGTAGATAAGTCCTCCTaGTCCTTAAGGGTATCTACTATAGAGGTCACTGAA | + |
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Preference number: 6 (lower is better) Translates to: LKRPELVVDKSS*SLRVSTIEVTE Trigger: TTCAGTGACCTCTATAGTAGATACCCTTAAGGACAAGGAGGACTTATCTACCACCAACTCCGGTCTCTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CCA 72 bp | AATGTCTGCTTCCGTTGGTGTTTTACTGTTGTCTCTTaGAGGTCGAGAATAAATTTTGGGCGATCCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: NVCFRWCFTVVS*RSRINFGRSIF Trigger: GAAGATGGATCGCCCAAAATTTATTCTCGACCTCCAAGAGACAACAGTAAAACACCAACGGAAGCAGACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS TCA 72 bp | AGTAACGTGGTCTCCTTCCGAGGTAATAGTTGTTTCTaGTTTAGGAATGGTGTTGTCAGCCCCAAAGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: SNVVSFRGNSCF*FRNGVVSPKEN Trigger: ATTTTCTTTGGGGCTGACAACACCATTCCTAAATCAGAAACAACTATTACCTCGGAAGGAGACCACGTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CAA 72 bp | AAATGTCTGCTTCCGTTGGTGTTTTACTGTTGTCTCTaGGAGGTCGAGAATAAATTTTGGGCGATCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: KCLLPLVFYCCL*EVENKFWAIHL Trigger: AAGATGGATCGCCCAAAATTTATTCTCGACCTCCAAGAGACAACAGTAAAACACCAACGGAAGCAGACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CAA 72 bp | AAATCTGTGGTGTTCACATGTGATTCCTCCATGACGTaGTCAGTTTCTGAGGCAGTGACAATAAAGTCATAC | + |
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Preference number: 6 (lower is better) Translates to: KSVVFTCDSSMT*SVSEAVTIKSY Trigger: GTATGACTTTATTGTCACTGCCTCAGAAACTGACAACGTCATGGAGGAATCACATGTGAACACCACAGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CAA 90 bp | TCTGAAACAATCAATTTGATCTCAGTTACATTCTCTTCTGCAATGTaGGTTATGTCTGGAATGGTGGTGACCTCCTTTTCAGTTGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SETINLISVTFSSAM*VMSGMVVTSFSVEG Trigger: CCCCTCAACTGAAAAGGAGGTCACCACCATTCCAGACATAACCAACATTGCAGAAGAGAATGTAACTGAGATCAAATTGATTGTTTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CAA 72 bp | TCTAATTTGAGTTTTTCCTTTGTAGGTGTGAGCTTGTaGACTGTAGTTGAAAAATCACCATCCGGTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SNLSFSFVGVSL*TVVEKSPSGVQ Trigger: CTGCACACCGGATGGTGATTTTTCAACTACAGTCAACAAGCTCACACCTACAAAGGAAAAACTCAAATTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CAA 72 bp | ACTGGAATGAAATTTTCAGTAATTGACCCCTTAGGTTaGGAGTTTGGAGTTTCAGTTGGAGTGGTAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: TGMKFSVIDPLG*EFGVSVGVVIS Trigger: AGAAATTACCACTCCAACTGAAACTCCAAACTCCAAACCTAAGGGGTCAATTACTGAAAATTTCATTCCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CAA 72 bp | GTCACAGTTTTGGGCCTATCTTCTGAAACAATCAATTaGATCTCAGTTACATTCTCTTCTGCAATGTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: VTVLGLSSETIN*ISVTFSSAMLV Trigger: AACCAACATTGCAGAAGAGAATGTAACTGAGATCAAATTGATTGTTTCAGAAGATAGGCCCAAAACTGTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CAA 90 bp | ATATCATCTTCTAATTTGAGTTTTTCCTTTGTAGGTGTGAGCTTGTaGACTGTAGTTGAAAAATCACCATCCGGTGTGCAGTCATTTACT | + |
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Preference number: 6 (lower is better) Translates to: ISSSNLSFSFVGVSL*TVVEKSPSGVQSFT Trigger: AGTAAATGACTGCACACCGGATGGTGATTTTTCAACTACAGTCAACAAGCTCACACCTACAAAGGAAAAACTCAAATTAGAAGATGATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CAA 90 bp | TCAATATCATCTTCTAATTTGAGTTTTTCCTTTGTAGGTGTGAGCTaGTTGACTGTAGTTGAAAAATCACCATCCGGTGTGCAGTCATTT | + |
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Preference number: 6 (lower is better) Translates to: SISSSNLSFSFVGVS*LTVVEKSPSGVQSF Trigger: AAATGACTGCACACCGGATGGTGATTTTTCAACTACAGTCAACAAGCTCACACCTACAAAGGAAAAACTCAAATTAGAAGATGATATTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CAA 90 bp | CTTAGTTTAGTCACAGTTTTGGGCCTATCTTCTGAAACAATCAATTaGATCTCAGTTACATTCTCTTCTGCAATGTTGGTTATGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LSLVTVLGLSSETIN*ISVTFSSAMLVMSG Trigger: TCCAGACATAACCAACATTGCAGAAGAGAATGTAACTGAGATCAAATTGATTGTTTCAGAAGATAGGCCCAAAACTGTGACTAAACTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CAA 90 bp | CCATCAGTCGATTCCTCATCATTTAAAGGATCTTCCACATTATCTTaGGCTTTTTCAGCCGAGTTAGTGAGTTCAAAAACAGTGATAAAT | + |
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Preference number: 6 (lower is better) Translates to: PSVDSSSFKGSSTLS*AFSAELVSSKTVIN Trigger: ATTTATCACTGTTTTTGAACTCACTAACTCGGCTGAAAAAGCCAAAGATAATGTGGAAGATCCTTTAAATGATGAGGAATCGACTGATGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS TCA 72 bp | TCACAGTTTTGGGCCTATCTTCTGAAACAATCAATTTaGTCTCAGTTACATTCTCTTCTGCAATGTTGGTTA | + |
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Preference number: 6 (lower is better) Translates to: SQFWAYLLKQSI*SQLHSLLQCWL Trigger: TAACCAACATTGCAGAAGAGAATGTAACTGAGATCAAATTGATTGTTTCAGAAGATAGGCCCAAAACTGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CAA 72 bp | TTTTCTTCTTCGGAGTCACTTAGTTTAGTCACAGTTTaGGGCCTATCTTCTGAAACAATCAATTTGATCTCA | + |
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Preference number: 6 (lower is better) Translates to: FSSSESLSLVTV*GLSSETINLIS Trigger: TGAGATCAAATTGATTGTTTCAGAAGATAGGCCCAAAACTGTGACTAAACTAAGTGACTCCGAAGAAGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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| CDS CAA 72 bp | GATTCCTCATCATTTAAAGGATCTTCCACATTATCTTaGGCTTTTTCAGCCGAGTTAGTGAGTTCAAAAACA | + |
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Preference number: 6 (lower is better) Translates to: DSSSFKGSSTLS*AFSAELVSSKT Trigger: TGTTTTTGAACTCACTAACTCGGCTGAAAAAGCCAAAGATAATGTGGAAGATCCTTTAAATGATGAGGAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000008051.5 |
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