Pregenerated sensors for CABP7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009075Ensembl transcript IDs: ENSMUST00000009219.3
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCAGGGCTGTGGCAGACCCTCAGGGGACTCAGATCCCTAGGGAATaGCTCAGGGCCTCCCAGGGTTACACCCTGGCCAGTGGGGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: CRAVADPQGTQIPRE*LRASQGYTLASGES Trigger: TGACTCCCCACTGGCCAGGGTGTAACCCTGGGAGGCCCTGAGCCATTCCCTAGGGATCTGAGTCCCCTGAGGGTCTGCCACAGCCCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR TCA 90 bp | GCTGAGCTGGTGCCAAGAAACGGCGTGACACAGGCGGAGCAAGCATaGGAGCTGTGTCGCCAGCCTCGAGGGTACAGAGAAGTGGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: AELVPRNGVTQAEQA*ELCRQPRGYREVGS Trigger: GGACCCCACTTCTCTGTACCCTCGAGGCTGGCGACACAGCTCTCATGCTTGCTCCGCCTGTGTCACGCCGTTTCTTGGCACCAGCTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR TCA 90 bp | CCCAAGAGGGCAGGCCCTGAACTTGGAAGAGTAGTCTGTGACCACTaGCAGTGCAGGGCTGTGGCAGACCCTCAGGGGACTCAGATCCCT | + |
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Preference number: 1 (lower is better) Translates to: PKRAGPELGRVVCDH*QCRAVADPQGTQIP Trigger: AGGGATCTGAGTCCCCTGAGGGTCTGCCACAGCCCTGCACTGTCAGTGGTCACAGACTACTCTTCCAAGTTCAGGGCCTGCCCTCTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR TCA 90 bp | AGGTCCTCCACAGCTGAGCCATGGCTCCATGCAAGGCCTAAGGGGTaGGGATTGGGATGGTCATTGTCCAGGCTCAAAGTGCCCAGGGGT | + |
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Preference number: 1 (lower is better) Translates to: RSSTAEPWLHARPKG*GLGWSLSRLKVPRG Trigger: ACCCCTGGGCACTTTGAGCCTGGACAATGACCATCCCAATCCTCACCCCTTAGGCCTTGCATGGAGCCATGGCTCAGCTGTGGAGGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR CCA 90 bp | CTCAGATCCCTAGGGAATGGCTCAGGGCCTCCCAGGGTTACACCCTaGCCAGTGGGGAGTCACACGAGCTACAGGATTTCTGCTTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: LRSLGNGSGPPRVTP*PVGSHTSYRISASF Trigger: GAAGGAAGCAGAAATCCTGTAGCTCGTGTGACTCCCCACTGGCCAGGGTGTAACCCTGGGAGGCCCTGAGCCATTCCCTAGGGATCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR CCA 90 bp | TGCTCTTGGTTCTGTCCTCCTGCCTCCATCAGGGGACAGGTGAGCTaGAATGAGACAGTGTCCCCTCCAGGGTGCTTAGGGATCAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: CSWFCPPASIRGQVS*NETVSPPGCLGISR Trigger: TCTACTGATCCCTAAGCACCCTGGAGGGGACACTGTCTCATTCCAGCTCACCTGTCCCCTGATGGAGGCAGGAGGACAGAACCAAGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR TCA 90 bp | TCAGGGTTCTACTTCCAGAAGGGCCGTGCAGGTGACCACCGTTTCTaGCAGTCGGGAAGTTGGAAGAGTAAGGTGGAATCTGTGAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: SGFYFQKGRAGDHRF*QSGSWKSKVESVRC Trigger: GCACCTCACAGATTCCACCTTACTCTTCCAACTTCCCGACTGTCAGAAACGGTGGTCACCTGCACGGCCCTTCTGGAAGTAGAACCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR GCA 90 bp | CCCTGCCTGACTTCAACCTGTCTCATCAGTCACAGTAAAGACAATTaGCTAACCGAGGAAGCAGAGCTGCCTTCCCTCCCTTCTCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: PCLTSTCLISHSKDN*LTEEAELPSLPSPW Trigger: CCAGGGAGAAGGGAGGGAAGGCAGCTCTGCTTCCTCGGTTAGGCAATTGTCTTTACTGTGACTGATGAGACAGGTTGAAGTCAGGCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR CCA 90 bp | CTCAGTTGGGCCTCTAGGTTCTGTGCTAGGAGACAATTCGGCCCTTaGTCTCTAAGCCTTTGGTGGATGGCTCAGAAATTAATGGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: LSWASRFCARRQFGP*SLSLWWMAQKLMGL Trigger: AAGGCCCATTAATTTCTGAGCCATCCACCAAAGGCTTAGAGACCAAGGGCCGAATTGTCTCCTAGCACAGAACCTAGAGGCCCAACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR GCA 90 bp | TTGGTGGATGGCTCAGAAATTAATGGGCCTTGGGGCTATCTCTCATaGCCCATCTTGTATGAGCATCTGCCTTTCCTGAAAAGCCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: LVDGSEINGPWGYLS*PILYEHLPFLKSPV Trigger: CACAGGGCTTTTCAGGAAAGGCAGATGCTCATACAAGATGGGGCATGAGAGATAGCCCCAAGGCCCATTAATTTCTGAGCCATCCACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR CCA 90 bp | TTGGTCTCTAAGCCTTTGGTGGATGGCTCAGAAATTAATGGGCCTTaGGGCTATCTCTCATGCCCCATCTTGTATGAGCATCTGCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: LVSKPLVDGSEINGP*GYLSCPILYEHLPF Trigger: GAAAGGCAGATGCTCATACAAGATGGGGCATGAGAGATAGCCCCAAGGCCCATTAATTTCTGAGCCATCCACCAAAGGCTTAGAGACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR TCA 90 bp | CCTTACTCACATAGTATATCTTTCTTCATCAGTGCATATAGGCCTTaGTTTTTACACAGGCTGCATAGCATTCTCTGCTGTGGACGTGCA | + |
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Preference number: 1 (lower is better) Translates to: PYSHSISFFISAYRP*FLHRLHSILCCGRA Trigger: TGCACGTCCACAGCAGAGAATGCTATGCAGCCTGTGTAAAAATCAAGGCCTATATGCACTGATGAAGAAAGATATACTATGTGAGTAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR GCA 90 bp | TATCTTTCTTCATCAGTGCATATAGGCCTTGATTTTTACACAGGCTaGATAGCATTCTCTGCTGTGGACGTGCATAAATATTTAACCAGT | + |
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Preference number: 1 (lower is better) Translates to: YLSSSVHIGLDFYTG*IAFSAVDVHKYLTS Trigger: ACTGGTTAAATATTTATGCACGTCCACAGCAGAGAATGCTATGCAGCCTGTGTAAAAATCAAGGCCTATATGCACTGATGAAGAAAGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | GTATGCCAGTGTGGCGGCGGCCCAGCTAGTAAGTGGCCCCAGGCTGGGGAAGGGAGTGCCCAGGGGTGGTaGCCCAGGGAGCAAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: VCQCGGGPASKWPQAGEGSAQGW*PREQAG Trigger: CCCAGCTTGCTCCCTGGGCCACCACCCCTGGGCACT...CCCTTCCCCAGCCTGGGGCCACTTACTAGCTGGGCCGCCGCCACACTGGCATAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR GCA 90 bp | CCCCTCCCTGCGGGCACCCCCACCTGGAGGGTGGTCCGTACTGTCCAAAGTCCATGTCCAGGCTCAAAGTaGCCAGGGGTGGTGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PLPAGTPTWRVVRTVQSPCPGSK*PGVVAQ Trigger: CTGGGCCACCACCCCTGGGCACTTTGAGCCTGGACA...TGGACTTTGGACAGTACGGACCACCCTCCAGGTGGGGGTGCCCGCAGGGAGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCCCTGCGGGCACCCCCACCTGGAGGGTGGTCCGTACTGTCCAAAGTCCACAGATCCCTAGGGAATaGCTCAGGGCCTCCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: PLPAGTPTWRVVRTVQSPQIPRE*LRASQG Trigger: ACCCTGGGAGGCCCTGAGCCATTCCCTAGGGATCTG...TGGACTTTGGACAGTACGGACCACCCTCCAGGTGGGGGTGCCCGCAGGGAGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCCTGCGGGCACCCCCACCTGGAGGGTGGTCCGTACTGTCCAAAGTCCATGGAAGAGTAGTCTGTaGCCACTGACAGTGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PLPAGTPTWRVVRTVQSPWKSSL*PLTVQG Trigger: GCCCTGCACTGTCAGTGGTCACAGACTACTCTTCCA...TGGACTTTGGACAGTACGGACCACCCTCCAGGTGGGGGTGCCCGCAGGGAGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCCTGCGGGCACCCCCACCTGGAGGGTGGTCCGTACTGTCCAAAGTCCACAAGAGGGCAGGCCCTaGACTTGGAAGAGTAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: PLPAGTPTWRVVRTVQSPQEGRP*TWKSSL Trigger: CAGACTACTCTTCCAAGTTCAGGGCCTGCCCTCTTG...TGGACTTTGGACAGTACGGACCACCCTCCAGGTGGGGGTGCCCGCAGGGAGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGCGGGCACCCCCACCTGGAGGGTGGTCCGTACTGTCCAAAGTCCAGTGGGGTCACCTCCCCCTGCCTaGCTTCAACCTGTCTCATCA | + |
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Preference number: 2 (lower is better) Translates to: PAGTPTWRVVRTVQSPVGSPPPA*LQPVSS Trigger: TGATGAGACAGGTTGAAGTCAGGCAGGGGGAGGTGA...CCCCACTGGACTTTGGACAGTACGGACCACCCTCCAGGTGGGGGTGCCCGCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCATGAGAGCTGTGTCGCCAGCCTCGAGGGTACAGAGAAGTGGGGTCCCCAAGCCCAGGGAGCAAGCTaGGGGAAGGGCTGCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: KHESCVASLEGTEKWGPQAQGAS*GKGCRQ Trigger: CTGCCTGCAGCCCTTCCCCCAGCTTGCTCCCTGGGC...TTGGGGACCCCACTTCTCTGTACCCTCGAGGCTGGCGACACAGCTCTCATGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCCCTGCGGGCACCCCCACCTGGAGGGTGGTCCGTACTGTCCAAAGTCCATTACACCCTGGCCAGTaGGGAGTCACACGAGCTACA | + |
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Preference number: 2 (lower is better) Translates to: PLPAGTPTWRVVRTVQSPLHPGQ*GVTRAT Trigger: TGTAGCTCGTGTGACTCCCCACTGGCCAGGGTGTAA...TGGACTTTGGACAGTACGGACCACCCTCCAGGTGGGGGTGCCCGCAGGGAGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCCCTGCGGGCACCCCCACCTGGAGGGTGGTCCGTACTGTCCAAAGTCCATCTGTCCTTGATGGCTaGCCTGTCTCTCTTGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PLPAGTPTWRVVRTVQSPSVLDG*PVSLAA Trigger: GGCAGCAAGAGAGACAGGCCAGCCATCAAGGACAGA...TGGACTTTGGACAGTACGGACCACCCTCCAGGTGGGGGTGCCCGCAGGGAGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGCGGGCACCCCCACCTGGAGGGTGGTCCGTACTGTCCAAAGTCCAGTGGGGGCTTCCTTCCTCAGTTaGGCCTCTAGGTTCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: PAGTPTWRVVRTVQSPVGASFLS*ASRFCA Trigger: AGCACAGAACCTAGAGGCCCAACTGAGGAAGGAAGC...CCCCACTGGACTTTGGACAGTACGGACCACCCTCCAGGTGGGGGTGCCCGCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTGCCAAGAAACGGCGTGACACAGGCGGAGCAAGCATGAGAGCTGTGTCGGACAGTGCAGGGCTGTaGCAGACCCTCAGGGGACTC | + |
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Preference number: 2 (lower is better) Translates to: AGAKKRRDTGGASMRAVSDSAGL*QTLRGL Trigger: GAGTCCCCTGAGGGTCTGCCACAGCCCTGCACTGTC...CGACACAGCTCTCATGCTTGCTCCGCCTGTGTCACGCCGTTTCTTGGCACCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTGCCAAGAAACGGCGTGACACAGGCGGAGCAAGCATGAGAGCTGTGTCGGCACTAACTGGATCCTaGGGGCTCCTGCACAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: AGAKKRRDTGGASMRAVSALTGS*GLLHKP Trigger: GGGCTTGTGCAGGAGCCCCCAGGATCCAGTTAGTGC...CGACACAGCTCTCATGCTTGCTCCGCCTGTGTCACGCCGTTTCTTGGCACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGGGACTCAGATCCCTAGGGAATGGCTCAGGGCCTCCCAGGGTTACACCCCTGAGTGGTGGGAAGTaGATGCTACACACAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LRGLRSLGNGSGPPRVTPLSGGK*MLHTGQ Trigger: CTGGCCTGTGTGTAGCATTCACTTCCCACCACTCAG...GGGTGTAACCCTGGGAGGCCCTGAGCCATTCCCTAGGGATCTGAGTCCCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | TCTTGCTGCCTCTCATGCTCTTGGTTCTGTCCTCCTGCCTCCATCAGGGGACAGCCCAGGGTTACACCCTaGCCAGTGGGGAGTCACACG | + |
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Preference number: 2 (lower is better) Translates to: SCCLSCSWFCPPASIRGQPRVTP*PVGSHT Trigger: CGTGTGACTCCCCACTGGCCAGGGTGTAACCCTGGG...CTGTCCCCTGATGGAGGCAGGAGGACAGAACCAAGAGCATGAGAGGCAGCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTGCAGGTGCAGTGGGTGTGGAGTaGGCACTGCAGGCACCCACG | + |
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Preference number: 2 (lower is better) Translates to: AQRFCMLSGFYFQKGRAGAVGVE*ALQAPT Trigger: CGTGGGTGCCTGCAGTGCCCACTCCACACCCACTGC...ACCTGCACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTGTGGCAGACCCTCAGGGGACTCAGATCCCTAGGGAATGGCTCAGGGCCGAAATTAATGGGCCTTaGGGCTATCTCTCATGCCCC | + |
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Preference number: 2 (lower is better) Translates to: RAVADPQGTQIPREWLRAEINGP*GYLSCP Trigger: GGGGCATGAGAGATAGCCCCAAGGCCCATTAATTTC...GGCCCTGAGCCATTCCCTAGGGATCTGAGTCCCCTGAGGGTCTGCCACAGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR GCA 90 bp | TTTGGGCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTGAGCTGGGGGAAGGGCTaGAGGCAGCAGTGGGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: FGLRGSACYQGSTSRRAVSWGKG*RQQWVW Trigger: CCACACCCACTGCTGCCTGCAGCCCTTCCCCCAGCT...CACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGCCCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | TTTGGGCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTGGGCTGCAGGCAGCAGTaGGTGTGGAGTGGGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: FGLRGSACYQGSTSRRAVGCRQQ*VWSGHC Trigger: GCAGTGCCCACTCCACACCCACTGCTGCCTGCAGCC...CACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGCCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTGCAGGTCAAAGTGCCCAGGGGTaGTGGCCCAGGGAGCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: AQRFCMLSGFYFQKGRAGQSAQG*WPREQA Trigger: AGCTTGCTCCCTGGGCCACCACCCCTGGGCACTTTG...ACCTGCACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCCCTGCGGGCACCCCCACCTGGAGGGTGGTCCGTACTGTCCAAAGTCCACGTTTCTCAAGAAGATaGGTGAGAAACATCCGAATG | + |
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Preference number: 2 (lower is better) Translates to: PLPAGTPTWRVVRTVQSPRFSRR*VRNIRM Trigger: CATTCGGATGTTTCTCACCCATCTTCTTGAGAAACG...TGGACTTTGGACAGTACGGACCACCCTCCAGGTGGGGGTGCCCGCAGGGAGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGAGGTGCTCTGCTCTAATCCTCTACCTTTTTCCTCTCCAGGGCTGAACCCAGATCCTGGGGGCTCCTaGACAAGCCCCTCCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: CEVLCSNPLPFSSPGLNPDPGGS*TSPSSS Trigger: GGAAGAGGAGGGGCTTGTGCAGGAGCCCCCAGGATC...TGGGTTCAGCCCTGGAGAGGAAAAAGGTAGAGGATTAGAGCAGAGCACCTCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGGGACTCAGATCCCTAGGGAATGGCTCAGGGCCTCCCAGGGTTACACCCTGGGGCTATCTCTCATaGCCCATCTTGTATGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LRGLRSLGNGSGPPRVTPWGYLS*PILYEH Trigger: ATGCTCATACAAGATGGGGCATGAGAGATAGCCCCA...GGGTGTAACCCTGGGAGGCCCTGAGCCATTCCCTAGGGATCTGAGTCCCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | TTTGGGCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTGAGGCAGCAGTGGGTGTaGAGTGGGCACTGCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: FGLRGSACYQGSTSRRAVRQQWV*SGHCRH Trigger: GTGCCTGCAGTGCCCACTCCACACCCACTGCTGCCT...CACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGCCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGGTGCTCTGCTCTAATCCTCTACCTTTTTCCTCTCCAGGGCTGAACCCACAGGTCCTCCACAGCTaGGCCATGGCTCCATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: CEVLCSNPLPFSSPGLNPQVLHS*AMAPCK Trigger: CTTGCATGGAGCCATGGCTCAGCTGTGGAGGACCTG...TGGGTTCAGCCCTGGAGAGGAAAAAGGTAGAGGATTAGAGCAGAGCACCTCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGAATGAGACAGTGTCCCCTCCAGGGTGCTTAGGGATCAGTAGAGCAGCCGGAGCTCCTGAGTGGTaGGAAGTGAATGCTACACAC | + |
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Preference number: 2 (lower is better) Translates to: SWNETVSPPGCLGISRAAGAPEW*EVNATH Trigger: GTGTGTAGCATTCACTTCCCACCACTCAGGAGCTCC...GGCTGCTCTACTGATCCCTAAGCACCCTGGAGGGGACACTGTCTCATTCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGAATGAGACAGTGTCCCCTCCAGGGTGCTTAGGGATCAGTAGAGCAGCCAGCATCTGCCTTTCCTaGAAAGCCCTGTGGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: SWNETVSPPGCLGISRAASICLS*KALWKK Trigger: CTTCTTCCACAGGGCTTTTCAGGAAAGGCAGATGCT...GGCTGCTCTACTGATCCCTAAGCACCCTGGAGGGGACACTGTCTCATTCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCATGAGAGCTGTGTCGCCAGCCTCGAGGGTACAGAGAAGTGGGGTCCCCAAATGCCCCATCTTGTATaGGCATCTGCCTTTCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: KHESCVASLEGTEKWGPQMPHLV*ASAFPE Trigger: TTCAGGAAAGGCAGATGCTCATACAAGATGGGGCAT...TTGGGGACCCCACTTCTCTGTACCCTCGAGGCTGGCGACACAGCTCTCATGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR TCA 90 bp | CTTTGGGCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTACAGGTGAGCTGGAATaGGACAGTGTCCCCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LWAQRFCMLSGFYFQKGRTGELE*DSVPSR Trigger: CCTGGAGGGGACACTGTCTCATTCCAGCTCACCTGT...ACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGCCCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR GCA 90 bp | GCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTGCAGGTTTGGTTCTGTCCTCCTaGCTCCATCAGGGGACAGGT | + |
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Preference number: 2 (lower is better) Translates to: AQRFCMLSGFYFQKGRAGLVLSS*LHQGTG Trigger: ACCTGTCCCCTGATGGAGGCAGGAGGACAGAACCAA...ACCTGCACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR TCA 90 bp | TTTGGGCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTGGCAAGGCCTAAGGGGTaGGGATTGGGATGGTCATTG | + |
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Preference number: 2 (lower is better) Translates to: FGLRGSACYQGSTSRRAVARPKG*GLGWSL Trigger: CAATGACCATCCCAATCCTCACCCCTTAGGCCTTGC...CACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGCCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR GCA 90 bp | CTTTGGGCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTGTGGTGGGAAGTGAATaGTACACACAGGCCAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LWAQRFCMLSGFYFQKGRVVGSE*YTQARG Trigger: TCCCCTGGCCTGTGTGTAGCATTCACTTCCCACCAC...ACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGCCCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGAGGTGCTCTGCTCTAATCCTCTACCTTTTTCCTCTCCAGGGCTGAACCCACTGGCCTGTCTCTCTTaGTGCCTCTCATGCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: CEVLCSNPLPFSSPGLNPLACLS*CLSCSW Trigger: CCAAGAGCATGAGAGGCAGCAAGAGAGACAGGCCAG...TGGGTTCAGCCCTGGAGAGGAAAAAGGTAGAGGATTAGAGCAGAGCACCTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGAGGTGCTCTGCTCTAATCCTCTACCTTTTTCCTCTCCAGGGCTGAACCCATGCCTCTCATGCTCTTaGTTCTGTCCTCCTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: CEVLCSNPLPFSSPGLNPCLSCS*FCPPAS Trigger: GGAGGCAGGAGGACAGAACCAAGAGCATGAGAGGCA...TGGGTTCAGCCCTGGAGAGGAAAAAGGTAGAGGATTAGAGCAGAGCACCTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTGCAGGTTCTTGCTGCCTCTCATaGTCTTGGTTCTGTCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: AQRFCMLSGFYFQKGRAGSCCLS*SWFCPP Trigger: AGGAGGACAGAACCAAGAGCATGAGAGGCAGCAAGA...ACCTGCACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR-3UTR GCA 90 bp | TGTGAGGTGCTCTGCTCTAATCCTCTACCTTTTTCCTCTCCAGGGCTGAACCCAGCCTGTCTCTCTTGCTaGCTCTCATGCTCTTGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: CEVLCSNPLPFSSPGLNPACLSC*LSCSWF Trigger: GAACCAAGAGCATGAGAGGCAGCAAGAGAGACAGGC...TGGGTTCAGCCCTGGAGAGGAAAAAGGTAGAGGATTAGAGCAGAGCACCTCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCCACTTTGGGCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGCTAAGGGGTGAGGATTaGGATGGTCATTGTCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: PHFGLRGSACYQGSTSRRLRGED*DGHCPG Trigger: GCCTGGACAATGACCATCCCAATCCTCACCCCTTAG...CCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGCCCAAAGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGTGCCAAGAAACGGCGTGACACAGGCGGAGCAAGCATGAGAGCTGTGTCGTCTCTAAGCCTTTGGTaGATGGCTCAGAAATTAATG | + |
|
Preference number: 2 (lower is better) Translates to: AGAKKRRDTGGASMRAVSSLSLW*MAQKLM Trigger: CATTAATTTCTGAGCCATCCACCAAAGGCTTAGAGA...CGACACAGCTCTCATGCTTGCTCCGCCTGTGTCACGCCGTTTCTTGGCACCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTGCAGGTGCCTGCCTAAAAGAATaGAGCACTAACTGGATCCTG | + |
|
Preference number: 2 (lower is better) Translates to: AQRFCMLSGFYFQKGRAGACLKE*STNWIL Trigger: CAGGATCCAGTTAGTGCTGCATTCTTTTAGGCAGGC...ACCTGCACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR-3UTR GCA 90 bp | TGTGAGGTGCTCTGCTCTAATCCTCTACCTTTTTCCTCTCCAGGGCTGAACCCAGAGCTACAGGATTTCTaGTTCCTTCCTCAGTTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: CEVLCSNPLPFSSPGLNPELQDF*FLPQLG Trigger: GCCCAACTGAGGAAGGAAGCAGAAATCCTGTAGCTC...TGGGTTCAGCCCTGGAGAGGAAAAAGGTAGAGGATTAGAGCAGAGCACCTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR-3UTR TCA 90 bp | TGTGAGGTGCTCTGCTCTAATCCTCTACCTTTTTCCTCTCCAGGGCTGAACCCACCACTGTTCTGGACATaGGTTTCTTGCCTGCCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: CEVLCSNPLPFSSPGLNPPLFWT*VSCLPK Trigger: TTTAGGCAGGCAAGAAACTCATGTCCAGAACAGTGG...TGGGTTCAGCCCTGGAGAGGAAAAAGGTAGAGGATTAGAGCAGAGCACCTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTGAGGTGCTCTGCTCTAATCCTCTACCTTTTTCCTCTCCAGGGCTGAACCCATGGTCTCTAAGCCTTTaGTGGATGGCTCAGAAATTA | + |
|
Preference number: 2 (lower is better) Translates to: CEVLCSNPLPFSSPGLNPWSLSL*WMAQKL Trigger: TAATTTCTGAGCCATCCACCAAAGGCTTAGAGACCA...TGGGTTCAGCCCTGGAGAGGAAAAAGGTAGAGGATTAGAGCAGAGCACCTCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR CCA 72 bp | ATGGTCATTGTCCAGGCTCAAAGTGCCCAGGGGTGGTaGCCCAGGGAGCAAGCTGGGGGAAGGGCTGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: MVIVQAQSAQGW*PREQAGGRAAG Trigger: GCCTGCAGCCCTTCCCCCAGCTTGCTCCCTGGGCCACCACCCCTGGGCACTTTGAGCCTGGACAATGACCAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR CCA 72 bp | GGGATGGTCATTGTCCAGGCTCAAAGTGCCCAGGGGTaGTGGCCCAGGGAGCAAGCTGGGGGAAGGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GMVIVQAQSAQG*WPREQAGGRAA Trigger: TGCAGCCCTTCCCCCAGCTTGCTCCCTGGGCCACCACCCCTGGGCACTTTGAGCCTGGACAATGACCATCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR CCA 72 bp | GTGGCAGACCCTCAGGGGACTCAGATCCCTAGGGAATaGCTCAGGGCCTCCCAGGGTTACACCCTGGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VADPQGTQIPRE*LRASQGYTLAS Trigger: ACTGGCCAGGGTGTAACCCTGGGAGGCCCTGAGCCATTCCCTAGGGATCTGAGTCCCCTGAGGGTCTGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR TCA 72 bp | GGAAGGGAGCCGAGGACTGCCAACCATCTCGGCCCCTaGAGAGCTGAAGGCTTGCATCTGCCTAGGCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GREPRTANHLGP*RAEGLHLPRLS Trigger: GCTCAGCCTAGGCAGATGCAAGCCTTCAGCTCTTCAGGGGCCGAGATGGTTGGCAGTCCTCGGCTCCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTGGCAGACCCTCAGGGGACTCAGATCCCTAGGGAATGGCTCAGGGCCTCCCATGGAGGACTGGCTTaGGGTCTAAGGAGTGTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: AVADPQGTQIPREWLRASHGGLA*GLRSVG Trigger: TCCGACACTCCTTAGACCCAAAGCCAGTCCTCCATG...GGAGGCCCTGAGCCATTCCCTAGGGATCTGAGTCCCCTGAGGGTCTGCCACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR TCA 72 bp | GGCTCCTGCACAAGCCCCTCCTCTTCCAGGAGCTCCTaGGTGGTGGGAAGTGAATGCTACACACAGGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSCTSPSSSRSS*VVGSECYTQAR Trigger: CCTGGCCTGTGTGTAGCATTCACTTCCCACCACTCAGGAGCTCCTGGAAGAGGAGGGGCTTGTGCAGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR TCA 72 bp | CATCTGCCTAGGCTGAGCTGGTGCCAAGAAACGGCGTaGCACAGGCGGAGCAAGCATGAGAGCTGTGTCGCC | + |
|
Preference number: 3 (lower is better) Translates to: HLPRLSWCQETA*HRRSKHESCVA Trigger: GGCGACACAGCTCTCATGCTTGCTCCGCCTGTGTCACGCCGTTTCTTGGCACCAGCTCAGCCTAGGCAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGGGGACTCAGATCCCTAGGGAATGGCTCAGGGCCTCCCAGGGTTACACCCGGATTGGGATGGTCATaGTCCAGGCTCAAAGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LRGLRSLGNGSGPPRVTPGLGWS*SRLKVP Trigger: GGGCACTTTGAGCCTGGACAATGACCATCCCAATCC...GGGTGTAACCCTGGGAGGCCCTGAGCCATTCCCTAGGGATCTGAGTCCCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR TCA 72 bp | GCAGGCCCTGAACTTGGAAGAGTAGTCTGTGACCACTaGCAGTGCAGGGCTGTGGCAGACCCTCAGGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: AGPELGRVVCDH*QCRAVADPQGT Trigger: AGTCCCCTGAGGGTCTGCCACAGCCCTGCACTGTCAGTGGTCACAGACTACTCTTCCAAGTTCAGGGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR GCA 72 bp | CAGGTGAGCTGGAATGAGACAGTGTCCCCTCCAGGGTaGTTAGGGATCAGTAGAGCAGCCAGGCTGGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: QVSWNETVSPPG*LGISRAARLGT Trigger: TGTGCCCAGCCTGGCTGCTCTACTGATCCCTAAGCACCCTGGAGGGGACACTGTCTCATTCCAGCTCACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR CCA 72 bp | ATGGCTCAGGGCCTCCCAGGGTTACACCCTGGCCAGTaGGGAGTCACACGAGCTACAGGATTTCTGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: MAQGLPGLHPGQ*GVTRATGFLLP Trigger: AGGAAGCAGAAATCCTGTAGCTCGTGTGACTCCCCACTGGCCAGGGTGTAACCCTGGGAGGCCCTGAGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR CCA 72 bp | CTAGGGAATGGCTCAGGGCCTCCCAGGGTTACACCCTaGCCAGTGGGGAGTCACACGAGCTACAGGATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LGNGSGPPRVTP*PVGSHTSYRIS Trigger: AGAAATCCTGTAGCTCGTGTGACTCCCCACTGGCCAGGGTGTAACCCTGGGAGGCCCTGAGCCATTCCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR CCA 72 bp | TTCTGTCCTCCTGCCTCCATCAGGGGACAGGTGAGCTaGAATGAGACAGTGTCCCCTCCAGGGTGCTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FCPPASIRGQVS*NETVSPPGCLG Trigger: CCCTAAGCACCCTGGAGGGGACACTGTCTCATTCCAGCTCACCTGTCCCCTGATGGAGGCAGGAGGACAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR GCA 72 bp | CTCCTCGACCAGCCCCCACTTTGGGCTCAGAGGTTCTaGATGTTATCAGGGTTCTACTTCCAGAAGGGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: LLDQPPLWAQRF*MLSGFYFQKGR Trigger: ACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGCCCAAAGTGGGGGCTGGTCGAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR TCA 72 bp | ACAGCTGAGCCATGGCTCCATGCAAGGCCTAAGGGGTaGGGATTGGGATGGTCATTGTCCAGGCTCAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TAEPWLHARPKG*GLGWSLSRLKV Trigger: CACTTTGAGCCTGGACAATGACCATCCCAATCCTCACCCCTTAGGCCTTGCATGGAGCCATGGCTCAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR CCA 72 bp | CCCTTAAAACCTCAGGCACAGGCCCCAGAAGATGCATaGAGGACTGGCTTTGGGTCTAAGGAGTGTCGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PLKPQAQAPEDA*RTGFGSKECRR Trigger: TCTCCGACACTCCTTAGACCCAAAGCCAGTCCTCCATGCATCTTCTGGGGCCTGTGCCTGAGGTTTTAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGGGCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTCTGCCTCTCATGCTCTaGGTTCTGTCCTCCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LWAQRFCMLSGFYFQKGRLPLML*VLSSCL Trigger: GAGGCAGGAGGACAGAACCAAGAGCATGAGAGGCAG...ACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGCCCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR TCA 72 bp | TACTTCCAGAAGGGCCGTGCAGGTGACCACCGTTTCTaGCAGTCGGGAAGTTGGAAGAGTAAGGTGGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: YFQKGRAGDHRF*QSGSWKSKVES Trigger: AGATTCCACCTTACTCTTCCAACTTCCCGACTGTCAGAAACGGTGGTCACCTGCACGGCCCTTCTGGAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR GCA 72 bp | CACCCTGCCCACTGTTCTGGACATGAGTTTCTTGCCTaGCTAAAAGAATGCAGCACTAACTGGATCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: HPAHCSGHEFLA*LKECSTNWILG Trigger: CCCCAGGATCCAGTTAGTGCTGCATTCTTTTAGGCAGGCAAGAAACTCATGTCCAGAACAGTGGGCAGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR CCA 72 bp | GCTAGGAGACAATTCGGCCCTTGGTCTCTAAGCCTTTaGTGGATGGCTCAGAAATTAATGGGCCTTGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ARRQFGPWSLSL*WMAQKLMGLGA Trigger: AGCCCCAAGGCCCATTAATTTCTGAGCCATCCACCAAAGGCTTAGAGACCAAGGGCCGAATTGTCTCCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| 3UTR-3UTR CAA 90 bp | TCCTTGATGGCTGGCCTGTCTCTCTTGCTGCCTCTCATGCTCTTGGTTCTGTCCTTGGTCTCTAAGCCTTaGGTGGATGGCTCAGAAATT | + |
|
Preference number: 3 (lower is better) Translates to: SLMAGLSLLLPLMLLVLSLVSKP*VDGSEI Trigger: AATTTCTGAGCCATCCACCAAAGGCTTAGAGACCAA...GGACAGAACCAAGAGCATGAGAGGCAGCAAGAGAGACAGGCCAGCCATCAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR GCA 72 bp | TGTTCTGGACATGAGTTTCTTGCCTGCCTAAAAGAATaGAGCACTAACTGGATCCTGGGGGCTCCTGCACAA | + |
|
Preference number: 3 (lower is better) Translates to: CSGHEFLACLKE*STNWILGAPAQ Trigger: TTGTGCAGGAGCCCCCAGGATCCAGTTAGTGCTGCATTCTTTTAGGCAGGCAAGAAACTCATGTCCAGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR CCA 72 bp | GCCTCTAGGTTCTGTGCTAGGAGACAATTCGGCCCTTaGTCTCTAAGCCTTTGGTGGATGGCTCAGAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: ASRFCARRQFGP*SLSLWWMAQKL Trigger: TAATTTCTGAGCCATCCACCAAAGGCTTAGAGACCAAGGGCCGAATTGTCTCCTAGCACAGAACCTAGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR GCA 72 bp | GGCTCAGAAATTAATGGGCCTTGGGGCTATCTCTCATaGCCCATCTTGTATGAGCATCTGCCTTTCCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSEINGPWGYLS*PILYEHLPFLK Trigger: TTTCAGGAAAGGCAGATGCTCATACAAGATGGGGCATGAGAGATAGCCCCAAGGCCCATTAATTTCTGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR GCA 72 bp | TCGGGAAGTTGGAAGAGTAAGGTGGAATCTGTGAGGTaGTCTGCTCTAATCCTCTACCTTTTTCCTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGSWKSKVESVR*SALILYLFPLQ Trigger: CTGGAGAGGAAAAAGGTAGAGGATTAGAGCAGAGCACCTCACAGATTCCACCTTACTCTTCCAACTTCCCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR CCA 72 bp | AAGCCTTTGGTGGATGGCTCAGAAATTAATGGGCCTTaGGGCTATCTCTCATGCCCCATCTTGTATGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: KPLVDGSEINGP*GYLSCPILYEH Trigger: ATGCTCATACAAGATGGGGCATGAGAGATAGCCCCAAGGCCCATTAATTTCTGAGCCATCCACCAAAGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR GCA 72 bp | TCATCAGTGCATATAGGCCTTGATTTTTACACAGGCTaGATAGCATTCTCTGCTGTGGACGTGCATAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: SSVHIGLDFYTG*IAFSAVDVHKY Trigger: ATATTTATGCACGTCCACAGCAGAGAATGCTATGCAGCCTGTGTAAAAATCAAGGCCTATATGCACTGATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| 3UTR TCA 72 bp | CATAGTATATCTTTCTTCATCAGTGCATATAGGCCTTaGTTTTTACACAGGCTGCATAGCATTCTCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HSISFFISAYRP*FLHRLHSILCC Trigger: ACAGCAGAGAATGCTATGCAGCCTGTGTAAAAATCAAGGCCTATATGCACTGATGAAGAAAGATATACTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS-3UTR CCA 90 bp | GTATGCCAGTGTGGCGGCGGCCCAGCTAGTAAGTGGCCCCAGGCTGGGGAAGGGCCGCTGCGCAGCACCTaGTTGGCCGCGATGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VCQCGGGPASKWPQAGEGPLRST*LAAMSM Trigger: CATGCTCATCGCGGCCAACCAGGTGCTGCGCAGCGG...CCCTTCCCCAGCCTGGGGCCACTTACTAGCTGGGCCGCCGCCACACTGGCATAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| CDS-3UTR GCA 90 bp | CCCCTCCCTGCGGGCACCCCCACCTGGAGGGTGGTCCGTACTGTCCAAAGTCCATGGGCACGGTGTAGATaGCCCGGTACATCAACGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLPAGTPTWRVVRTVQSPWARCR*PGTSTP Trigger: CGGCGTTGATGTACCGGGGCATCTACACCGTGCCCA...TGGACTTTGGACAGTACGGACCACCCTCCAGGTGGGGGTGCCCGCAGGGAGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCCTGCGGGCACCCCCACCTGGAGGGTGGTCCGTACTGTCCAAAGTCCACCCGGTCGAATACCTTaGAGGCCTCTCGGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPAGTPTWRVVRTVQSPPGRIP*RPLGSP Trigger: AGGAGATCCGAGAGGCCTTCAAGGTATTCGACCGGG...TGGACTTTGGACAGTACGGACCACCCTCCAGGTGGGGGTGCCCGCAGGGAGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| CDS-3UTR GCA 90 bp | CTCAGGGGACTCAGATCCCTAGGGAATGGCTCAGGGCCTCCCAGGGTTACACCCCGCAGATCAGGCTCTTaGGCACACACGTCTGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRGLRSLGNGSGPPRVTPRRSGS*AHTSGG Trigger: TCCGCCAGACGTGTGTGCGCAAGAGCCTGATCTGCG...GGGTGTAACCCTGGGAGGCCCTGAGCCATTCCCTAGGGATCTGAGTCCCCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| CDS-3UTR CCA 90 bp | GCTGTGGCAGACCCTCAGGGGACTCAGATCCCTAGGGAATGGCTCAGGGCCTCCGCCATGGAACTTCTCTaGGATCCCCGAGGTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVADPQGTQIPREWLRASAMELL*DPRGGE Trigger: CTCTCCACCTCGGGGATCCCAGAGAAGTTCCATGGC...GGAGGCCCTGAGCCATTCCCTAGGGATCTGAGTCCCCTGAGGGTCTGCCACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| CDS-3UTR CCA 90 bp | GCTGGTGCCAAGAAACGGCGTGACACAGGCGGAGCAAGCATGAGAGCTGTGTCGGGCGGATCTGCTGGTTaGAACAGGTCTCCACGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGAKKRRDTGGASMRAVSGGSAG*NRSPRP Trigger: TGGACGTGGAGACCTGTTCCAACCAGCAGATCCGCC...CGACACAGCTCTCATGCTTGCTCCGCCTGTGTCACGCCGTTTCTTGGCACCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTGATGGCTGGCCTGTCTCTCTTGCTGCCTCTCATGCTCTTGGTTCTGTCCCTGGGATCCCCGAGGTaGAGAGCTTGGGTCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLMAGLSLLLPLMLLVLSLGSPR*RAWVPG Trigger: TCCTGGGACCCAAGCTCTCCACCTCGGGGATCCCAG...GGACAGAACCAAGAGCATGAGAGGCAGCAAGAGAGACAGGCCAGCCATCAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| CDS-3UTR CCA 90 bp | AGGGCTGTGGCAGACCCTCAGGGGACTCAGATCCCTAGGGAATGGCTCAGGGCCTCAAAGTCAGTGCCATaGAACTTCTCTGGGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RAVADPQGTQIPREWLRASKSVP*NFSGIP Trigger: GGGGATCCCAGAGAAGTTCCATGGCACTGACTTTGA...GGCCCTGAGCCATTCCCTAGGGATCTGAGTCCCCTGAGGGTCTGCCACAGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| CDS-3UTR CCA 90 bp | AGGGCTGTGGCAGACCCTCAGGGGACTCAGATCCCTAGGGAATGGCTCAGGGCCTCTCTATGTCCTTCATaGACAAGTGCTCGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RAVADPQGTQIPREWLRASLCPS*TSARRR Trigger: CCTTCTGCGAGCACTTGTCCATGAAGGACATAGAGA...GGCCCTGAGCCATTCCCTAGGGATCTGAGTCCCCTGAGGGTCTGCCACAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| CDS-3UTR CCA 90 bp | AGCTGGAATGAGACAGTGTCCCCTCCAGGGTGCTTAGGGATCAGTAGAGCAGCCTCAGCAGTGCCCAGGTaGCTCTCCTCCTCTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SWNETVSPPGCLGISRAASAVPR*LSSSVM Trigger: CATGACAGAGGAGGAGAGCCACCTGGGCACTGCTGA...GGCTGCTCTACTGATCCCTAAGCACCCTGGAGGGGACACTGTCTCATTCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| CDS-3UTR GCA 90 bp | TGTGAGGTGCTCTGCTCTAATCCTCTACCTTTTTCCTCTCCAGGGCTGAACCCAATATCCACCGGGCGCTaGTCCGACAGCAGGTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CEVLCSNPLPFSSPGLNPISTGR*SDSRLG Trigger: GCCCAACCTGCTGTCGGAGCAGCGCCCGGTGGATAT...TGGGTTCAGCCCTGGAGAGGAAAAAGGTAGAGGATTAGAGCAGAGCACCTCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| CDS-3UTR CCA 90 bp | CCCCACTTTGGGCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCTCCGACAGCAGGTTaGGCACGGTGTAGATGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PHFGLRGSACYQGSTSRRAPTAG*ARCRCP Trigger: GGGGCATCTACACCGTGCCCAACCTGCTGTCGGAGC...CCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGCCCAAAGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTGATGGCTGGCCTGTCTCTCTTGCTGCCTCTCATGCTCTTGGTTCTGTCCGTCTGGCGGATCTGCTaGTTGGAACAGGTCTCCACG | + |
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Preference number: 4 (lower is better) Translates to: SLMAGLSLLLPLMLLVLSVWRIC*LEQVST Trigger: CGTGGAGACCTGTTCCAACCAGCAGATCCGCCAGAC...GGACAGAACCAAGAGCATGAGAGGCAGCAAGAGAGACAGGCCAGCCATCAAGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS-3UTR GCA 90 bp | TTTGGGCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTGCACGTCTGGCGGATCTaGTGGTTGGAACAGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: FGLRGSACYQGSTSRRAVHVWRI*WLEQVS Trigger: GGAGACCTGTTCCAACCAGCAGATCCGCCAGACGTG...CACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGCCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS-3UTR CCA 90 bp | TCCTTGATGGCTGGCCTGTCTCTCTTGCTGCCTCTCATGCTCTTGGTTCTGTCCTCCATGTCTAGCCGCTaGATGATAACCTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SLMAGLSLLLPLMLLVLSSMSSR*MITSSS Trigger: GGAGCTGGAGGTTATCATCCAGCGGCTAGACATGGA...GGACAGAACCAAGAGCATGAGAGGCAGCAAGAGAGACAGGCCAGCCATCAAGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS-3UTR CCA 90 bp | CTTTGGGCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTTTGCGCACACACGTCTaGCGGATCTGCTGGTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: LWAQRFCMLSGFYFQKGRLRTHV*RICWLE Trigger: TTCCAACCAGCAGATCCGCCAGACGTGTGTGCGCAA...ACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGCCCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS-3UTR GCA 90 bp | GCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTGCAGGTCCGTGTCAAAGTCAGTaGCATGGAACTTCTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: AQRFCMLSGFYFQKGRAGPCQSQ*HGTSLG Trigger: TCCCAGAGAAGTTCCATGGCACTGACTTTGACACGG...ACCTGCACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS-3UTR GCA 90 bp | GCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTGCAGGTTCCACTGTCAGCTTCTaGATGTCACACTTCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: AQRFCMLSGFYFQKGRAGSTVSF*MSHFQK Trigger: CTTCTGGAAGTGTGACATGCAGAAGCTGACAGTGGA...ACCTGCACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS CCA 90 bp | GCTCGTCCTCAGGGATATCCACCGGGCGCTGCTCCGACAGCAGGTTaGGCACGGTGTAGATGCCCCGGTACATCAACGCCGCCGTCACCG | + |
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Preference number: 5 (lower is better) Translates to: ARPQGYPPGAAPTAG*ARCRCPGTSTPPSP Trigger: CGGTGACGGCGGCGTTGATGTACCGGGGCATCTACACCGTGCCCAACCTGCTGTCGGAGCAGCGCCCGGTGGATATCCCTGAGGACGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS-3UTR CAA 90 bp | CCCCTCCCTGCGGGCACCCCCACCTGGAGGGTGGTCCGTACTGTCCAAAGTCCACCCGAGGTGGAGAGCTaGGGTCCCAGGAGGGTTACA | + |
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Preference number: 5 (lower is better) Translates to: PLPAGTPTWRVVRTVQSPPEVES*GPRRVT Trigger: TGTAACCCTCCTGGGACCCAAGCTCTCCACCTCGGG...TGGACTTTGGACAGTACGGACCACCCTCCAGGTGGGGGTGCCCGCAGGGAGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS-3UTR CAA 90 bp | CCCCTCCCTGCGGGCACCCCCACCTGGAGGGTGGTCCGTACTGTCCAAAGTCCACTGCGCAGCACCTGGTaGGCCGCGATGAGCATGACA | + |
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Preference number: 5 (lower is better) Translates to: PLPAGTPTWRVVRTVQSPLRSTW*AAMSMT Trigger: TGTCATGCTCATCGCGGCCAACCAGGTGCTGCGCAG...TGGACTTTGGACAGTACGGACCACCCTCCAGGTGGGGGTGCCCGCAGGGAGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS CCA 90 bp | AAGGCGATGGCGAAGGCGCAGATCAGGCTCTTGCGCACACACGTCTaGCGGATCTGCTGGTTGGAACAGGTCTCCACGTCCACGGGACAC | + |
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Preference number: 5 (lower is better) Translates to: KAMAKAQIRLLRTHV*RICWLEQVSTSTGH Trigger: GTGTCCCGTGGACGTGGAGACCTGTTCCAACCAGCAGATCCGCCAGACGTGTGTGCGCAAGAGCCTGATCTGCGCCTTCGCCATCGCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS-3UTR CAA 90 bp | GCTGGTGCCAAGAAACGGCGTGACACAGGCGGAGCAAGCATGAGAGCTGTGTCGCTCCTCAAAGTCCACTaGGCCGTCACCATCCATGTC | + |
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Preference number: 5 (lower is better) Translates to: AGAKKRRDTGGASMRAVSLLKVH*AVTIHV Trigger: GACATGGATGGTGACGGCCAAGTGGACTTTGAGGAG...CGACACAGCTCTCATGCTTGCTCCGCCTGTGTCACGCCGTTTCTTGGCACCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS-3UTR CAA 90 bp | TCCTTGATGGCTGGCCTGTCTCTCTTGCTGCCTCTCATGCTCTTGGTTCTGTCCTGGCGGATCTGCTGGTaGGAACAGGTCTCCACGTCC | + |
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Preference number: 5 (lower is better) Translates to: SLMAGLSLLLPLMLLVLSWRICW*EQVSTS Trigger: GGACGTGGAGACCTGTTCCAACCAGCAGATCCGCCA...GGACAGAACCAAGAGCATGAGAGGCAGCAAGAGAGACAGGCCAGCCATCAAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS CCA 90 bp | TTCTGCATGTCACACTTCCAGAAGACCGTGTCAAAGTCAGTGCCATaGAACTTCTCTGGGATCCCCGAGGTGGAGAGCTTGGGTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: FCMSHFQKTVSKSVP*NFSGIPEVESLGPR Trigger: CCTGGGACCCAAGCTCTCCACCTCGGGGATCCCAGAGAAGTTCCATGGCACTGACTTTGACACGGTCTTCTGGAAGTGTGACATGCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS GCA 90 bp | TCAGCTTCTGCATGTCACACTTCCAGAAGACCGTGTCAAAGTCAGTaGCATGGAACTTCTCTGGGATCCCCGAGGTGGAGAGCTTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: SASACHTSRRPCQSQ*HGTSLGSPRWRAWV Trigger: GACCCAAGCTCTCCACCTCGGGGATCCCAGAGAAGTTCCATGGCACTGACTTTGACACGGTCTTCTGGAAGTGTGACATGCAGAAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS CCA 90 bp | ACACTTCCAGAAGACCGTGTCAAAGTCAGTGCCATGGAACTTCTCTaGGATCCCCGAGGTGGAGAGCTTGGGTCCCAGGAGGGTTACAAA | + |
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Preference number: 5 (lower is better) Translates to: TLPEDRVKVSAMELL*DPRGGELGSQEGYK Trigger: TTTGTAACCCTCCTGGGACCCAAGCTCTCCACCTCGGGGATCCCAGAGAAGTTCCATGGCACTGACTTTGACACGGTCTTCTGGAAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS-3UTR CAA 90 bp | CCCCACTTTGGGCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGTCCCGGTCGAATACCTaGAAGGCCTCTCGGATCTCC | + |
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Preference number: 5 (lower is better) Translates to: PHFGLRGSACYQGSTSRRSRSNT*KASRIS Trigger: GGAGATCCGAGAGGCCTTCAAGGTATTCGACCGGGA...CCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGCCCAAAGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS-3UTR CAA 90 bp | GCTCAGAGGTTCTGCATGTTATCAGGGTTCTACTTCCAGAAGGGCCGTGCAGGTTTAGAGATGAAGCCGTaGCCATCCCGGTCGAATACC | + |
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Preference number: 5 (lower is better) Translates to: AQRFCMLSGFYFQKGRAGLEMKP*PSRSNT Trigger: GGTATTCGACCGGGATGGCAACGGCTTCATCTCTAA...ACCTGCACGGCCCTTCTGGAAGTAGAACCCTGATAACATGCAGAACCTCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS GCA 72 bp | GGCGCTGCTCCGACAGCAGGTTGGGCACGGTGTAGATaGCCCGGTACATCAACGCCGCCGTCACCGGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GAAPTAGWARCR*PGTSTPPSPGG Trigger: TCCACCCGGTGACGGCGGCGTTGATGTACCGGGGCATCTACACCGTGCCCAACCTGCTGTCGGAGCAGCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS CCA 72 bp | CAGGGATATCCACCGGGCGCTGCTCCGACAGCAGGTTaGGCACGGTGTAGATGCCCCGGTACATCAACGCCG | + |
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Preference number: 6 (lower is better) Translates to: QGYPPGAAPTAG*ARCRCPGTSTP Trigger: CGGCGTTGATGTACCGGGGCATCTACACCGTGCCCAACCTGCTGTCGGAGCAGCGCCCGGTGGATATCCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS CCA 72 bp | GGCTCTTGCGCACACACGTCTGGCGGATCTGCTGGTTaGAACAGGTCTCCACGTCCACGGGACACTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: GSCAHTSGGSAG*NRSPRPRDTPQ Trigger: CTGAGGAGTGTCCCGTGGACGTGGAGACCTGTTCCAACCAGCAGATCCGCCAGACGTGTGTGCGCAAGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS CCA 72 bp | GCGAAGGCGCAGATCAGGCTCTTGCGCACACACGTCTaGCGGATCTGCTGGTTGGAACAGGTCTCCACGTCC | + |
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Preference number: 6 (lower is better) Translates to: AKAQIRLLRTHV*RICWLEQVSTS Trigger: GGACGTGGAGACCTGTTCCAACCAGCAGATCCGCCAGACGTGTGTGCGCAAGAGCCTGATCTGCGCCTTCGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS GCA 72 bp | CAGATCAGGCTCTTGCGCACACACGTCTGGCGGATCTaGTGGTTGGAACAGGTCTCCACGTCCACGGGACAC | + |
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Preference number: 6 (lower is better) Translates to: QIRLLRTHVWRI*WLEQVSTSTGH Trigger: GTGTCCCGTGGACGTGGAGACCTGTTCCAACCAGCAGATCCGCCAGACGTGTGTGCGCAAGAGCCTGATCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS CCA 72 bp | ATCAGGCTCTTGCGCACACACGTCTGGCGGATCTGCTaGTTGGAACAGGTCTCCACGTCCACGGGACACTCC | + |
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Preference number: 6 (lower is better) Translates to: IRLLRTHVWRIC*LEQVSTSTGHS Trigger: GGAGTGTCCCGTGGACGTGGAGACCTGTTCCAACCAGCAGATCCGCCAGACGTGTGTGCGCAAGAGCCTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS CAA 72 bp | AGGCTCTTGCGCACACACGTCTGGCGGATCTGCTGGTaGGAACAGGTCTCCACGTCCACGGGACACTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: RLLRTHVWRICW*EQVSTSTGHSS Trigger: TGAGGAGTGTCCCGTGGACGTGGAGACCTGTTCCAACCAGCAGATCCGCCAGACGTGTGTGCGCAAGAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS CCA 72 bp | GAAGACCGTGTCAAAGTCAGTGCCATGGAACTTCTCTaGGATCCCCGAGGTGGAGAGCTTGGGTCCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: EDRVKVSAMELL*DPRGGELGSQE Trigger: CTCCTGGGACCCAAGCTCTCCACCTCGGGGATCCCAGAGAAGTTCCATGGCACTGACTTTGACACGGTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS CCA 72 bp | TCCACGTCCACGGGACACTCCTCAGCAGTGCCCAGGTaGCTCTCCTCCTCTGTCATGATGATGTTCTCTATG | + |
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Preference number: 6 (lower is better) Translates to: STSTGHSSAVPR*LSSSVMMMFSM Trigger: CATAGAGAACATCATCATGACAGAGGAGGAGAGCCACCTGGGCACTGCTGAGGAGTGTCCCGTGGACGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS CAA 72 bp | CCATGGAACTTCTCTGGGATCCCCGAGGTGGAGAGCTaGGGTCCCAGGAGGGTTACAAACTCCTCAAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: PWNFSGIPEVES*GPRRVTNSSKS Trigger: GGACTTTGAGGAGTTTGTAACCCTCCTGGGACCCAAGCTCTCCACCTCGGGGATCCCAGAGAAGTTCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS GCA 72 bp | GCATGTCACACTTCCAGAAGACCGTGTCAAAGTCAGTaGCATGGAACTTCTCTGGGATCCCCGAGGTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: ACHTSRRPCQSQ*HGTSLGSPRWR Trigger: TCTCCACCTCGGGGATCCCAGAGAAGTTCCATGGCACTGACTTTGACACGGTCTTCTGGAAGTGTGACATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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| CDS CCA 72 bp | TCACACTTCCAGAAGACCGTGTCAAAGTCAGTGCCATaGAACTTCTCTGGGATCCCCGAGGTGGAGAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SHFQKTVSKSVP*NFSGIPEVESL Trigger: CAAGCTCTCCACCTCGGGGATCCCAGAGAAGTTCCATGGCACTGACTTTGACACGGTCTTCTGGAAGTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009219.3 |
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