Pregenerated sensors for CABP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005649Ensembl transcript IDs: ENSMUST00000005791.14, ENSMUST00000117400.2, ENSMUST00000152995.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTATATATGTCTCTGCTCCCAAGAAGCAAAGCAAGTGTTTGCAGTTaGACCCCAGTCCATACTGGGGCAAGCCTACTCCCACCCTCCATC | + |
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Preference number: 1 (lower is better) Translates to: LYMSLLPRSKASVCS*TPVHTGASLLPPSI Trigger: GATGGAGGGTGGGAGTAGGCTTGCCCCAGTATGGACTGGGGTGCAACTGCAAACACTTGCTTTGCTTCTTGGGAGCAGAGACATATATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR CCA 90 bp | GCTTCCAGGAAGGATGCTGCAGTCACTTGGCTTGGGCTAGGGATTTaGGGAATTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: ASRKDAAVTWLGLGI*GILSFSLSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAATTCCCCAAATCCCTAGCCCAAGCCAAGTGACTGCAGCATCCTTCCTGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR TCA 90 bp | CAACTTGACACAACCAAGAGTTGTCTGGAAAGGGGAAACCTCACGTaGAGAACTACCAGAATCAGATTAGCCTGTGGGCATATCTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: QLDTTKSCLERGNLT*RTTRIRLACGHICG Trigger: CCCACAGATATGCCCACAGGCTAATCTGATTCTGGTAGTTCTTCACGTGAGGTTTCCCCTTTCCAGACAACTCTTGGTTGTGTCAAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
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| 3UTR CCA 90 bp | CACGTGAAGAACTACCAGAATCAGATTAGCCTGTGGGCATATCTGTaGGTCTATGTTTCATTTCTAATTGGTACAGGAGTCCCCAGTCTA | + |
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Preference number: 1 (lower is better) Translates to: HVKNYQNQISLWAYL*VYVSFLIGTGVPSL Trigger: TAGACTGGGGACTCCTGTACCAATTAGAAATGAAACATAGACCCACAGATATGCCCACAGGCTAATCTGATTCTGGTAGTTCTTCACGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
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| 3UTR TCA 90 bp | GACATTTCTAAACTGATATTTATTAGGATTTTCATTATAACCCTGTaGCTAGTGGGACACTCTCTTACCAAGAGAAGGAAATGGGGTCGT | + |
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Preference number: 1 (lower is better) Translates to: DISKLIFIRIFIITL*LVGHSLTKRRKWGR Trigger: ACGACCCCATTTCCTTCTCTTGGTAAGAGAGTGTCCCACTAGTCACAGGGTTATAATGAAAATCCTAATAAATATCAGTTTAGAAATGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR-3UTR GCA 90 bp | ATCTCCATTGATATCAGCCTCCTGTACCACCTCAGCAATCTCCCGGGGTGTGAGGGCCTGCTGCAGTTCTaGCAGTGTGATCTCCCCATC | + |
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Preference number: 2 (lower is better) Translates to: ISIDISLLYHLSNLPGCEGLLQF*QCDLPI Trigger: GATGGGGAGATCACACTGGCAGAACTGCAGCAGGCC...CTCACACCCCGGGAGATTGCTGAGGTGGTACAGGAGGCTGATATCAATGGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152995.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTACCACCTCAGCAATCTCCCGGGGTGTGAGCTTCTCCCCCAGCAGCCTCTGTCTCTGCAAGCAATTTaGGGGTCATCAGTTCCACAA | + |
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Preference number: 2 (lower is better) Translates to: LYHLSNLPGCELLPQQPLSLQAI*GSSVPQ Trigger: TTGTGGAACTGATGACCCCCAAATTGCTTGCAGAGA...CAGAGGCTGCTGGGGGAGAAGCTCACACCCCGGGAGATTGCTGAGGTGGTACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000152995.2 |
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| 3UTR-3UTR GCA 90 bp | CCGGAGAAGCCAGGGATAGATCAACACAGCAGCAGAGGGCTTCCAGGAAGGATGAGCAAAGCAAGTGTTTaGAGTTGCACCCCAGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: PEKPGIDQHSSRGLPGRMSKASV*SCTPVH Trigger: ATGGACTGGGGTGCAACTGCAAACACTTGCTTTGCT...CATCCTTCCTGGAAGCCCTCTGCTGCTGTGTTGATCTATCCCTGGCTTCTCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR CAA 90 bp | ATCAACACAGCAGCAGAGGGCTTCCAGGAAGGATGCTGCAGTCACTaGGCTTGGGCTAGGGATTTGGGGAATTCTCTCTTTCTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: INTAAEGFQEGCCSH*AWARDLGNSLFLSL Trigger: GAGAGAGAGAAAGAGAGAATTCCCCAAATCCCTAGCCCAAGCCAAGTGACTGCAGCATCCTTCCTGGAAGCCCTCTGCTGCTGTGTTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR CAA 90 bp | TCTATATATGTCTCTGCTCCCAAGAAGCAAAGCAAGTGTTTGCAGTaGCACCCCAGTCCATACTGGGGCAAGCCTACTCCCACCCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: SIYVSAPKKQSKCLQ*HPSPYWGKPTPTLH Trigger: ATGGAGGGTGGGAGTAGGCTTGCCCCAGTATGGACTGGGGTGCAACTGCAAACACTTGCTTTGCTTCTTGGGAGCAGAGACATATATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGGCAGCACCATTCCCTGGACAAGTGGTTCTGGGCTACATGAGAAAGCTAGCAAAGACCAGTGAGTaGGCTGCTTTATCACAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LWAAPFPGQVVLGYMRKLAKTSE*AALSQQ Trigger: TTGCTGTGATAAAGCAGCTCACTCACTGGTCTTTGC...TAGCTTTCTCATGTAGCCCAGAACCACTTGTCCAGGGAATGGTGCTGCCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAACAGTGCCATCTCCATTGATATCAGCCTCCTGTACCACCTCAGCAATCTCGCATCTCGCATCTCCTaGACACCAATCATCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: VNSAISIDISLLYHLSNLASRIS*TPIIPA Trigger: AGCAGGGATGATTGGTGTCCAGGAGATGCGAGATGC...GAGATTGCTGAGGTGGTACAGGAGGCTGATATCAATGGAGATGGCACTGTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152995.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAACAGTGCCATCTCCATTGATATCAGCCTCCTGTACCACCTCAGCAATCTCCATCCCTGCTGTCTCTaGAAGCAATTTGGGGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: VNSAISIDISLLYHLSNLHPCCL*KQFGGH Trigger: ATGACCCCCAAATTGCTTGCAGAGACAGCAGGGATG...GAGATTGCTGAGGTGGTACAGGAGGCTGATATCAATGGAGATGGCACTGTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152995.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAATAGGAAACATGTTCCCCAAAGCACACCAATTCACATCATGGTTGCAAGTCCCCAGTCTACTCTaGGCAGCACCATTCCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: CRIGNMFPKAHQFTSWLQVPSLL*AAPFPG Trigger: TCCAGGGAATGGTGCTGCCCAGAGTAGACTGGGGAC...TTGCAACCATGATGTGAATTGGTGTGCTTTGGGGAACATGTTTCCTATTCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
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| 3UTR CAA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGATTTaGCAGGGGATTAAATATTCGCAGGGATCAGCTTGTACTAAACCT | + |
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Preference number: 2 (lower is better) Translates to: SLSLSLSLSLSLSLI*QGIKYSQGSACTKP Trigger: AGGTTTAGTACAAGCTGATCCCTGCGAATATTTAATCCCCTGCAAAATCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGGGCATATCTGTGGGTCTATGTTTCATTTCTAATTGGTACAGGAGTCCCTCACAGCAACACACATaGAATGAGAACACACCTTCA | + |
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Preference number: 2 (lower is better) Translates to: PVGISVGLCFISNWYRSPSQQHT*NENTPS Trigger: TGAAGGTGTGTTCTCATTTCATGTGTGTTGCTGTGA...GGGACTCCTGTACCAATTAGAAATGAAACATAGACCCACAGATATGCCCACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
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| 3UTR CAA 90 bp | AATATTCGCAGGGATCAGCTTGTACTAAACCTTGATAATCCAGATTaGCAGTTTAGCTCAGTTCCTCCAGGGTTATCTCACACTAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: NIRRDQLVLNLDNPD*QFSSVPPGLSHTRA Trigger: TGCCCTAGTGTGAGATAACCCTGGAGGAACTGAGCTAAACTGCAAATCTGGATTATCAAGGTTTAGTACAAGCTGATCCCTGCGAATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR-3UTR TCA 90 bp | AAATTCTTTATCTTGAATGATAAAGCAACTGAAGGGTCCAGATCCATACATGAGAGTGCTCAGCCATGTTaGCAAGGCAGCAGGTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: KFFILNDKATEGSRSIHESAQPC*QGSRCL Trigger: CAGACACCTGCTGCCTTGTCAACATGGCTGAGCACT...CTCATGTATGGATCTGGACCCTTCAGTTGCTTTATCATTCAAGATAAAGAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR-3UTR CCA 90 bp | CATCTTTTAACCAAGGGAGTCATGGAAGGAGAATGTGGTGGGAAAGAGATTAGGTCCTTTAAGGTATTCTaGGTATCCAGTGCTCTACAA | + |
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Preference number: 2 (lower is better) Translates to: HLLTKGVMEGECGGKEIRSFKVF*VSSALQ Trigger: TTGTAGAGCACTGGATACCCAGAATACCTTAAAGGA...CCTAATCTCTTTCCCACCACATTCTCCTTCCATGACTCCCTTGGTTAAAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR-3UTR CCA 90 bp | TTGATAATCCAGATTTGCAGTTTAGCTCAGTTCCTCCAGGGTTATCTCACACTAGACAGACTCTGCTTCTaGGGAACTGGAAAAACACAA | + |
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Preference number: 2 (lower is better) Translates to: LIIQICSLAQFLQGYLTLDRLCF*GTGKTQ Trigger: TTGTGTTTTTCCAGTTCCCCAGAAGCAGAGTCTGTC...TAGTGTGAGATAACCCTGGAGGAACTGAGCTAAACTGCAAATCTGGATTATCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR-3UTR TCA 90 bp | AGGATGCAGAATAGGAAACATGTTCCCCAAAGCACACCAATTCACATCATGGTTGAACACACCTTCAAATaGGGACTTGGAGAAGATTAT | + |
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Preference number: 2 (lower is better) Translates to: RMQNRKHVPQSTPIHIMVEHTFK*GLGEDY Trigger: ATAATCTTCTCCAAGTCCTCATTTGAAGGTGTGTTC...AACCATGATGTGAATTGGTGTGCTTTGGGGAACATGTTTCCTATTCTGCATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATGCAGAATAGGAAACATGTTCCCCAAAGCACACCAATTCACATCATGGTTTGTTTCATTTCTAATTaGTACAGGAGTCCCCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: RMQNRKHVPQSTPIHIMVCFISN*YRSPQS Trigger: AGACTGGGGACTCCTGTACCAATTAGAAATGAAACA...AACCATGATGTGAATTGGTGTGCTTTGGGGAACATGTTTCCTATTCTGCATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAATAGGAAACATGTTCCCCAAAGCACACCAATTCACATCATGGTTGCAACTGTGGGCATATCTGTaGGTCTATGTTTCATTTCTA | + |
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Preference number: 2 (lower is better) Translates to: CRIGNMFPKAHQFTSWLQLWAYL*VYVSFL Trigger: TAGAAATGAAACATAGACCCACAGATATGCCCACAG...TTGCAACCATGATGTGAATTGGTGTGCTTTGGGGAACATGTTTCCTATTCTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
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| 3UTR-3UTR CCA 90 bp | AAATTCTTTATCTTGAATGATAAAGCAACTGAAGGGTCCAGATCCATACATGAGCTGCTTCTGGGGAACTaGAAAAACACAACTGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: KFFILNDKATEGSRSIHELLLGN*KNTTVN Trigger: ATTCACAGTTGTGTTTTTCCAGTTCCCCAGAAGCAG...CTCATGTATGGATCTGGACCCTTCAGTTGCTTTATCATTCAAGATAAAGAATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR GCA 72 bp | GTGAGCTTCTCCCCCAGCAGCCTCTGCATGGCCTGCTaGAGTTCTGCCAGTGTGATCTCCCCATCTCCATTG | + |
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Preference number: 3 (lower is better) Translates to: VSFSPSSLCMAC*SSASVISPSPL Trigger: CAATGGAGATGGGGAGATCACACTGGCAGAACTGCAGCAGGCCATGCAGAGGCTGCTGGGGGAGAAGCTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152995.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTCCCGGGGTGTGAGCTTCTCCCCCAGCAGCCTCTGCATGGCCTGCTGCAGTATCTCCCCATCTCCATaGGCATCAAACTCCTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: ISRGVSFSPSSLCMACCSISPSP*ASNSLK Trigger: CTTCAAGGAGTTTGATGCCAATGGAGATGGGGAGAT...ACTGCAGCAGGCCATGCAGAGGCTGCTGGGGGAGAAGCTCACACCCCGGGAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000152995.2 |
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| 3UTR GCA 72 bp | ATCAACACAGCAGCAGAGGGCTTCCAGGAAGGATGCTaGAGTCACTTGGCTTGGGCTAGGGATTTGGGGAAT | + |
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Preference number: 3 (lower is better) Translates to: INTAAEGFQEGC*SHLAWARDLGN Trigger: ATTCCCCAAATCCCTAGCCCAAGCCAAGTGACTGCAGCATCCTTCCTGGAAGCCCTCTGCTGCTGTGTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR CCA 72 bp | CAAAGCAAGTGTTTGCAGTTGCACCCCAGTCCATACTaGGGCAAGCCTACTCCCACCCTCCATCCTTTAAGG | + |
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Preference number: 3 (lower is better) Translates to: QSKCLQLHPSPY*GKPTPTLHPLR Trigger: CCTTAAAGGATGGAGGGTGGGAGTAGGCTTGCCCCAGTATGGACTGGGGTGCAACTGCAAACACTTGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR CCA 72 bp | GAGGGCTTCCAGGAAGGATGCTGCAGTCACTTGGCTTaGGCTAGGGATTTGGGGAATTCTCTCTTTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: EGFQEGCCSHLA*ARDLGNSLFLS Trigger: AGAGAGAAAGAGAGAATTCCCCAAATCCCTAGCCCAAGCCAAGTGACTGCAGCATCCTTCCTGGAAGCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR-3UTR CAA 90 bp | ATCTCCATTGATATCAGCCTCCTGTACCACCTCAGCAATCTCCCGGGGTGTGAGGTCTCTGCAAGCAATTaGGGGGTCATCAGTTCCACA | + |
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Preference number: 3 (lower is better) Translates to: ISIDISLLYHLSNLPGCEVSASN*GVISST Trigger: TGTGGAACTGATGACCCCCAAATTGCTTGCAGAGAC...CTCACACCCCGGGAGATTGCTGAGGTGGTACAGGAGGCTGATATCAATGGAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152995.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTCCATTGATATCAGCCTCCTGTACCACCTCAGCAATCTCCCGGGGTGTGAGTTGGCATCAAACTCCTaGAAGGCATCTCGCATCTCC | + |
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Preference number: 3 (lower is better) Translates to: ISIDISLLYHLSNLPGCELASNS*KASRIS Trigger: GGAGATGCGAGATGCCTTCAAGGAGTTTGATGCCAA...CTCACACCCCGGGAGATTGCTGAGGTGGTACAGGAGGCTGATATCAATGGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152995.2 |
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| 3UTR TCA 72 bp | CTGGGTATCCAGTGCTCTACAAGTGCTCAGCCATGTTaGCAAGGCAGCAGGTGTCTGGAGCTTCTATTACCT | + |
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Preference number: 3 (lower is better) Translates to: LGIQCSTSAQPC*QGSRCLELLLP Trigger: AGGTAATAGAAGCTCCAGACACCTGCTGCCTTGTCAACATGGCTGAGCACTTGTAGAGCACTGGATACCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR GCA 72 bp | TCAAAGTCTACACGGCCACCAAGGTTCATTCGGATTTaGTGGCCCAACTCAGTCAACTCCATCTCTGTAGGC | + |
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Preference number: 3 (lower is better) Translates to: SKSTRPPRFIRI*WPNSVNSISVG Trigger: GCCTACAGAGATGGAGTTGACTGAGTTGGGCCAGCAAATCCGAATGAACCTTGGTGGCCGTGTAGACTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152995.2 |
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| 3UTR CCA 72 bp | AAGTCTACACGGCCACCAAGGTTCATTCGGATTTGCTaGCCCAACTCAGTCAACTCCATCTCTGTAGGCATG | + |
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Preference number: 3 (lower is better) Translates to: KSTRPPRFIRIC*PNSVNSISVGM Trigger: CATGCCTACAGAGATGGAGTTGACTGAGTTGGGCCAGCAAATCCGAATGAACCTTGGTGGCCGTGTAGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152995.2 |
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| 3UTR GCA 72 bp | CCTTTAAGGTATTCTGGGTATCCAGTGCTCTACAAGTaGTCAGCCATGTTGACAAGGCAGCAGGTGTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: PLRYSGYPVLYK*SAMLTRQQVSG Trigger: TCCAGACACCTGCTGCCTTGTCAACATGGCTGAGCACTTGTAGAGCACTGGATACCCAGAATACCTTAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR GCA 72 bp | TATATGTCTCTGCTCCCAAGAAGCAAAGCAAGTGTTTaGAGTTGCACCCCAGTCCATACTGGGGCAAGCCTA | + |
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Preference number: 3 (lower is better) Translates to: YMSLLPRSKASV*SCTPVHTGASL Trigger: TAGGCTTGCCCCAGTATGGACTGGGGTGCAACTGCAAACACTTGCTTTGCTTCTTGGGAGCAGAGACATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR CCA 72 bp | CAAGCCTACTCCCACCCTCCATCCTTTAAGGTATTCTaGGTATCCAGTGCTCTACAAGTGCTCAGCCATGTT | + |
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Preference number: 3 (lower is better) Translates to: QAYSHPPSFKVF*VSSALQVLSHV Trigger: AACATGGCTGAGCACTTGTAGAGCACTGGATACCCAGAATACCTTAAAGGATGGAGGGTGGGAGTAGGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR CCA 72 bp | AAGGATGCTGCAGTCACTTGGCTTGGGCTAGGGATTTaGGGAATTCTCTCTTTCTCTCTCTCTCTCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: KDAAVTWLGLGI*GILSFSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAAAGAGAGAATTCCCCAAATCCCTAGCCCAAGCCAAGTGACTGCAGCATCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR CCA 72 bp | GTGGGCATATCTGTGGGTCTATGTTTCATTTCTAATTaGTACAGGAGTCCCCAGTCTACTCTGGGCAGCACC | + |
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Preference number: 3 (lower is better) Translates to: VGISVGLCFISN*YRSPQSTLGST Trigger: GGTGCTGCCCAGAGTAGACTGGGGACTCCTGTACCAATTAGAAATGAAACATAGACCCACAGATATGCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
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| 3UTR TCA 72 bp | ACAACCAAGAGTTGTCTGGAAAGGGGAAACCTCACGTaGAGAACTACCAGAATCAGATTAGCCTGTGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: TTKSCLERGNLT*RTTRIRLACGH Trigger: ATGCCCACAGGCTAATCTGATTCTGGTAGTTCTTCACGTGAGGTTTCCCCTTTCCAGACAACTCTTGGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
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| 3UTR CCA 72 bp | AACTACCAGAATCAGATTAGCCTGTGGGCATATCTGTaGGTCTATGTTTCATTTCTAATTGGTACAGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: NYQNQISLWAYL*VYVSFLIGTGV Trigger: GACTCCTGTACCAATTAGAAATGAAACATAGACCCACAGATATGCCCACAGGCTAATCTGATTCTGGTAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
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| 3UTR CCA 72 bp | CCTCACGTGAAGAACTACCAGAATCAGATTAGCCTGTaGGCATATCTGTGGGTCTATGTTTCATTTCTAATT | + |
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Preference number: 3 (lower is better) Translates to: PHVKNYQNQISL*AYLWVYVSFLI Trigger: AATTAGAAATGAAACATAGACCCACAGATATGCCCACAGGCTAATCTGATTCTGGTAGTTCTTCACGTGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
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| 3UTR TCA 72 bp | AAGCTTGGAGGAAGATATGACACAAATTCTTTATCTTaGATGATAAAGCAACTGAAGGGTCCAGATCCATAC | + |
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Preference number: 3 (lower is better) Translates to: KLGGRYDTNSLS*MIKQLKGPDPY Trigger: GTATGGATCTGGACCCTTCAGTTGCTTTATCATTCAAGATAAAGAATTTGTGTCATATCTTCCTCCAAGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| 3UTR TCA 72 bp | GGGAACTGGAAAAACACAACTGTGAATGCCTCTTCCTaGGACATTTCTAAACTGATATTTATTAGGATTTTC | + |
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Preference number: 3 (lower is better) Translates to: GNWKNTTVNASS*DISKLIFIRIF Trigger: GAAAATCCTAATAAATATCAGTTTAGAAATGTCTCAGGAAGAGGCATTCACAGTTGTGTTTTTCCAGTTCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| CDS-3UTR GCA 90 bp | GCAATCTCCCGGGGTGTGAGCTTCTCCCCCAGCAGCCTCTGCATGGCCTGCTGCTTCCCGGAGCTCCGCTaGTTTTCAGCAATGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: AISRGVSFSPSSLCMACCFPELR*FSAMPF Trigger: AAAAGGCATTGCTGAAAAGCAGCGGAGCTCCGGGAA...GCAGCAGGCCATGCAGAGGCTGCTGGGGGAGAAGCTCACACCCCGGGAGATTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000152995.2 |
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| CDS-3UTR TCA 90 bp | CTCTGGGCAGCACCATTCCCTGGACAAGTGGTTCTGGGCTACATGAGAAAGCTACAATCTCCCGGGGTGTaGGCTTCTCCCCCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LWAAPFPGQVVLGYMRKLQSPGV*ASPPAA Trigger: GGCTGCTGGGGGAGAAGCTCACACCCCGGGAGATTG...TAGCTTTCTCATGTAGCCCAGAACCACTTGTCCAGGGAATGGTGCTGCCCAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
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| CDS-3UTR CCA 90 bp | CCGGAGAAGCCAGGGATAGATCAACACAGCAGCAGAGGGCTTCCAGGAAGGATGCCAGCAGCCTCTGCATaGCCTGCTGCAGTTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PEKPGIDQHSSRGLPGRMPAASA*PAAVLP Trigger: TGGCAGAACTGCAGCAGGCCATGCAGAGGCTGCTGG...CATCCTTCCTGGAAGCCCTCTGCTGCTGTGTTGATCTATCCCTGGCTTCTCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| CDS-3UTR TCA 90 bp | CCGGAGAAGCCAGGGATAGATCAACACAGCAGCAGAGGGCTTCCAGGAAGGATGGCAGTTCTGCCAGTGTaGTCTCCCCATCTCCATTGG | + |
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Preference number: 4 (lower is better) Translates to: PEKPGIDQHSSRGLPGRMAVLPV*SPHLHW Trigger: CCAATGGAGATGGGGAGATCACACTGGCAGAACTGC...CATCCTTCCTGGAAGCCCTCTGCTGCTGTGTTGATCTATCCCTGGCTTCTCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| CDS-3UTR GCA 90 bp | CTGTACCACCTCAGCAATCTCCCGGGGTGTGAGCTTCTCCCCCAGCAGCCTCTGCTTTTCTCAAGAAGATaGAGGCAGGACCCATTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LYHLSNLPGCELLPQQPLLFSRR*RQDPLE Trigger: TTCCAATGGGTCCTGCCTGCATCTTCTTGAGAAAAG...CAGAGGCTGCTGGGGGAGAAGCTCACACCCCGGGAGATTGCTGAGGTGGTACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000152995.2 |
||
| 3UTR CAA 72 bp | GTCTCTGCTCCCAAGAAGCAAAGCAAGTGTTTGCAGTaGCACCCCAGTCCATACTGGGGCAAGCCTACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSAPKKQSKCLQ*HPSPYWGKPTP Trigger: GGGAGTAGGCTTGCCCCAGTATGGACTGGGGTGCAACTGCAAACACTTGCTTTGCTTCTTGGGAGCAGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR TCA 90 bp | CATCTTTTAACCAAGGGAGTCATGGAAGGAGAATGTGGTGGGAAAGAGATTAGGCAATCTCCCGGGGTGTaGGCTTCTCCCCCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLLTKGVMEGECGGKEIRQSPGV*ASPPAA Trigger: GGCTGCTGGGGGAGAAGCTCACACCCCGGGAGATTG...CCTAATCTCTTTCCCACCACATTCTCCTTCCATGACTCCCTTGGTTAAAAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR GCA 90 bp | CCCGGAGAAGCCAGGGATAGATCAACACAGCAGCAGAGGGCTTCCAGGAAGGATGACACCAATCATCCCTaGTGTCTCTGCAAGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: PGEARDRSTQQQRASRKDDTNHP*CLCKQF Trigger: AAATTGCTTGCAGAGACAGCAGGGATGATTGGTGTC...ATCCTTCCTGGAAGCCCTCTGCTGCTGTGTTGATCTATCCCTGGCTTCTCCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGGCATATCTGTGGGTCTATGTTTCATTTCTAATTGGTACAGGAGTCCCGGCCTGCTGCAGTTCTaGCAGTGTGATCTCCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PVGISVGLCFISNWYRSPGLLQF*QCDLPI Trigger: GATGGGGAGATCACACTGGCAGAACTGCAGCAGGCC...GGGACTCCTGTACCAATTAGAAATGAAACATAGACCCACAGATATGCCCACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| 3UTR CAA 72 bp | TCTGGGTATCCAGTGCTCTACAAGTGCTCAGCCATGTaGACAAGGCAGCAGGTGTCTGGAGCTTCTATTACC | + |
|
Preference number: 4 (lower is better) Translates to: SGYPVLYKCSAM*TRQQVSGASIT Trigger: GGTAATAGAAGCTCCAGACACCTGCTGCCTTGTCAACATGGCTGAGCACTTGTAGAGCACTGGATACCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR GCA 90 bp | CATCTTTTAACCAAGGGAGTCATGGAAGGAGAATGTGGTGGGAAAGAGATTAGGGGCCTGCTGCAGTTCTaGCAGTGTGATCTCCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: HLLTKGVMEGECGGKEIRGLLQF*QCDLPI Trigger: GATGGGGAGATCACACTGGCAGAACTGCAGCAGGCC...CCTAATCTCTTTCCCACCACATTCTCCTTCCATGACTCCCTTGGTTAAAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR GCA 90 bp | CACAACCAAGAGTTGTCTGGAAAGGGGAAACCTCACGTGAAGAACTACCAGAATCTCTGCATGGCCTGCTaGAGTTCTGCCAGTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: HNQELSGKGKPHVKNYQNLCMAC*SSASVI Trigger: GATCACACTGGCAGAACTGCAGCAGGCCATGCAGAG...ATTCTGGTAGTTCTTCACGTGAGGTTTCCCCTTTCCAGACAACTCTTGGTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR GCA 90 bp | AGCCTGTGGGCATATCTGTGGGTCTATGTTTCATTTCTAATTGGTACAGGAGTCAGCCTCTGCATGGCCTaGTGCAGTTCTGCCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLWAYLWVYVSFLIGTGVSLCMA*CSSASV Trigger: CACACTGGCAGAACTGCAGCAGGCCATGCAGAGGCT...GACTCCTGTACCAATTAGAAATGAAACATAGACCCACAGATATGCCCACAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR CCA 90 bp | TATATATGTCTCTGCTCCCAAGAAGCAAAGCAAGTGTTTGCAGTTGCACCCCAGCTCATCCTGTCCCAGTaGTCTCTCCCGCTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YICLCSQEAKQVFAVAPQLILSQ*SLPLLF Trigger: GAAAAGCAGCGGGAGAGACCACTGGGACAGGATGAG...CTGGGGTGCAACTGCAAACACTTGCTTTGCTTCTTGGGAGCAGAGACATATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGCAGCACCATTCCCTGGACAAGTGGTTCTGGGCTACATGAGAAAGCTATCTCTGCAAGCAATTTaGGGGTCATCAGTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LWAAPFPGQVVLGYMRKLSLQAI*GSSVPQ Trigger: TTGTGGAACTGATGACCCCCAAATTGCTTGCAGAGA...TAGCTTTCTCATGTAGCCCAGAACCACTTGTCCAGGGAATGGTGCTGCCCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| 3UTR CAA 72 bp | ATATATGTCTCTGCTCCCAAGAAGCAAAGCAAGTGTTaGCAGTTGCACCCCAGTCCATACTGGGGCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IYVSAPKKQSKC*QLHPSPYWGKP Trigger: AGGCTTGCCCCAGTATGGACTGGGGTGCAACTGCAAACACTTGCTTTGCTTCTTGGGAGCAGAGACATATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| 3UTR CAA 72 bp | GAAGGATGCTGCAGTCACTTGGCTTGGGCTAGGGATTaGGGGAATTCTCTCTTTCTCTCTCTCTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGCCSHLAWARD*GNSLFLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAAAGAGAGAATTCCCCAAATCCCTAGCCCAAGCCAAGTGACTGCAGCATCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| 3UTR CAA 72 bp | TTCAAAGTCTACACGGCCACCAAGGTTCATTCGGATTaGCTGGCCCAACTCAGTCAACTCCATCTCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKVYTATKVHSD*LAQLSQLHLCR Trigger: CCTACAGAGATGGAGTTGACTGAGTTGGGCCAGCAAATCCGAATGAACCTTGGTGGCCGTGTAGACTTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152995.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGATGCAGAATAGGAAACATGTTCCCCAAAGCACACCAATTCACATCATGGGCAGTTCTGCCAGTGTaGTCTCCCCATCTCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGCRIGNMFPKAHQFTSWAVLPV*SPHLHW Trigger: CCAATGGAGATGGGGAGATCACACTGGCAGAACTGC...CCATGATGTGAATTGGTGTGCTTTGGGGAACATGTTTCCTATTCTGCATCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGGGGCAAGCCTACTCCCACCCTCCATCCTTTAAGGTATTCTGGGTATCCCTTTTCTCAAGAAGATaGAGGCAGGACCCATTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILGQAYSHPPSFKVFWVSLFSRR*RQDPLE Trigger: TTCCAATGGGTCCTGCCTGCATCTTCTTGAGAAAAG...GGATACCCAGAATACCTTAAAGGATGGAGGGTGGGAGTAGGCTTGCCCCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR GCA 90 bp | GAGAATGTGGTGGGAAAGAGATTAGGAAATGATGTCATAGCTTCTGGCATGCTTAGCCTCTGCATGGCCTaGTGCAGTTCTGCCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ENVVGKRLGNDVIASGMLSLCMA*CSSASV Trigger: CACACTGGCAGAACTGCAGCAGGCCATGCAGAGGCT...AAGCATGCCAGAAGCTATGACATCATTTCCTAATCTCTTTCCCACCACATTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR GCA 90 bp | TTGATAATCCAGATTTGCAGTTTAGCTCAGTTCCTCCAGGGTTATCTCACACTATCCCCCAGCAGCCTCTaGATGGCCTGCTGCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIIQICSLAQFLQGYLTLSPSSL*MACCSS Trigger: AGAACTGCAGCAGGCCATGCAGAGGCTGCTGGGGGA...TAGTGTGAGATAACCCTGGAGGAACTGAGCTAAACTGCAAATCTGGATTATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR GCA 90 bp | CTTGATATAGCCAAGTTTAAATTTGCCTCCCTCAAATGTGATCCCACAGAGTACTCCCCCAGCAGCCTCTaGATGGCCTGCTGCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDIAKFKFASLKCDPTEYSPSSL*MACCSS Trigger: AGAACTGCAGCAGGCCATGCAGAGGCTGCTGGGGGA...GTACTCTGTGGGATCACATTTGAGGGAGGCAAATTTAAACTTGGCTATATCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR CCA 90 bp | TATATATGTCTCTGCTCCCAAGAAGCAAAGCAAGTGTTTGCAGTTGCACCCCAGGCATCTCGCATCTCCTaGACACCAATCATCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YICLCSQEAKQVFAVAPQASRIS*TPIIPA Trigger: AGCAGGGATGATTGGTGTCCAGGAGATGCGAGATGC...CTGGGGTGCAACTGCAAACACTTGCTTTGCTTCTTGGGAGCAGAGACATATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR CCA 90 bp | CTTGATATAGCCAAGTTTAAATTTGCCTCCCTCAAATGTGATCCCACAGAGTACCCAGCAGCCTCTGCATaGCCTGCTGCAGTTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LDIAKFKFASLKCDPTEYPAASA*PAAVLP Trigger: TGGCAGAACTGCAGCAGGCCATGCAGAGGCTGCTGG...GTACTCTGTGGGATCACATTTGAGGGAGGCAAATTTAAACTTGGCTATATCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR CCA 90 bp | GGACTTGGAGAAGATTATAGAGTAGATGAACTGGAGGGAGAACCACATAGAGAACTCATCCTGTCCCAGTaGTCTCTCCCGCTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLGEDYRVDELEGEPHRELILSQ*SLPLLF Trigger: GAAAAGCAGCGGGAGAGACCACTGGGACAGGATGAG...TTCTCTATGTGGTTCTCCCTCCAGTTCATCTACTCTATAATCTTCTCCAAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGGCATATCTGTGGGTCTATGTTTCATTTCTAATTGGTACAGGAGTCCCAGTGGTCTCTCCCGCTaGTTTTCAGCAATGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PVGISVGLCFISNWYRSPSGLSR*FSAMPF Trigger: AAAAGGCATTGCTGAAAAGCAGCGGGAGAGACCACT...GGGACTCCTGTACCAATTAGAAATGAAACATAGACCCACAGATATGCCCACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR GCA 90 bp | ACTTGCTTCTATATATGTCTCTGCTCCCAAGAAGCAAAGCAAGTGTTTGCAGTTCTCTGCATGGCCTGCTaGAGTTCTGCCAGTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: TCFYICLCSQEAKQVFAVLCMAC*SSASVI Trigger: GATCACACTGGCAGAACTGCAGCAGGCCATGCAGAG...AACTGCAAACACTTGCTTTGCTTCTTGGGAGCAGAGACATATATAGAAGCAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR GCA 90 bp | GAGAATGTGGTGGGAAAGAGATTAGGAAATGATGTCATAGCTTCTGGCATGCTTCATCCCTGCTGTCTCTaGAAGCAATTTGGGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ENVVGKRLGNDVIASGMLHPCCL*KQFGGH Trigger: ATGACCCCCAAATTGCTTGCAGAGACAGCAGGGATG...AAGCATGCCAGAAGCTATGACATCATTTCCTAATCTCTTTCCCACCACATTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR GCA 90 bp | GGACTTGGAGAAGATTATAGAGTAGATGAACTGGAGGGAGAACCACATAGAGAACATCCCTGCTGTCTCTaGAAGCAATTTGGGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLGEDYRVDELEGEPHREHPCCL*KQFGGH Trigger: ATGACCCCCAAATTGCTTGCAGAGACAGCAGGGATG...TTCTCTATGTGGTTCTCCCTCCAGTTCATCTACTCTATAATCTTCTCCAAGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR CCA 90 bp | TATATATGTCTCTGCTCCCAAGAAGCAAAGCAAGTGTTTGCAGTTGCACCCCAGTCTCTGCAAGCAATTTaGGGGTCATCAGTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: YICLCSQEAKQVFAVAPQSLQAI*GSSVPQ Trigger: TTGTGGAACTGATGACCCCCAAATTGCTTGCAGAGA...CTGGGGTGCAACTGCAAACACTTGCTTTGCTTCTTGGGAGCAGAGACATATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| 3UTR CAA 72 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGATTTaGCAGGGGATTAAATATTCGCAGGGATCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSLSLI*QGIKYSQGSAC Trigger: ACAAGCTGATCCCTGCGAATATTTAATCCCCTGCAAAATCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR GCA 90 bp | AGCCTGTGGGCATATCTGTGGGTCTATGTTTCATTTCTAATTGGTACAGGAGTCCTTTTCTCAAGAAGATaGAGGCAGGACCCATTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLWAYLWVYVSFLIGTGVLFSRR*RQDPLE Trigger: TTCCAATGGGTCCTGCCTGCATCTTCTTGAGAAAAG...GACTCCTGTACCAATTAGAAATGAAACATAGACCCACAGATATGCCCACAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGAATAGGAAACATGTTCCCCAAAGCACACCAATTCACATCATGGTTGCAAGACACCAATCATCCCTaGTGTCTCTGCAAGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: CRIGNMFPKAHQFTSWLQDTNHP*CLCKQF Trigger: AAATTGCTTGCAGAGACAGCAGGGATGATTGGTGTC...TTGCAACCATGATGTGAATTGGTGTGCTTTGGGGAACATGTTTCCTATTCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| 3UTR CAA 72 bp | AGGGATCAGCTTGTACTAAACCTTGATAATCCAGATTaGCAGTTTAGCTCAGTTCCTCCAGGGTTATCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RDQLVLNLDNPD*QFSSVPPGLSH Trigger: GTGAGATAACCCTGGAGGAACTGAGCTAAACTGCAAATCTGGATTATCAAGGTTTAGTACAAGCTGATCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| 3UTR CAA 72 bp | AGACAAGGGAGAGGGGAGATTCTTGACAAAGGGGTGTaGTTGGCTTGTTTCCTTGAAGGATTTATAAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: RQGRGEILDKGV*LACFLEGFISI Trigger: AATACTTATAAATCCTTCAAGGAAACAAGCCAACAACACCCCTTTGTCAAGAATCTCCCCTCTCCCTTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGAATAGGAAACATGTTCCCCAAAGCACACCAATTCACATCATGGTTGCAAACAGGTGTAGATTCCTaGATTTCTTCCCCAAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: CRIGNMFPKAHQFTSWLQTGVDS*ISSPKY Trigger: ATACTTTGGGGAAGAAATCCAGGAATCTACACCTGT...TTGCAACCATGATGTGAATTGGTGTGCTTTGGGGAACATGTTTCCTATTCTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR GCA 90 bp | AAATTCTTTATCTTGAATGATAAAGCAACTGAAGGGTCCAGATCCATACATGAGAGTGGTCTCTCCCGCTaGTTTTCAGCAATGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KFFILNDKATEGSRSIHESGLSR*FSAMPF Trigger: AAAAGGCATTGCTGAAAAGCAGCGGGAGAGACCACT...CTCATGTATGGATCTGGACCCTTCAGTTGCTTTATCATTCAAGATAAAGAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| 3UTR CAA 72 bp | CAAGGGAGAGGGGAGATTCTTGACAAAGGGGTGTTGTaGGCTTGTTTCCTTGAAGGATTTATAAGTATTATA | + |
|
Preference number: 4 (lower is better) Translates to: QGRGEILDKGVL*ACFLEGFISII Trigger: TATAATACTTATAAATCCTTCAAGGAAACAAGCCAACAACACCCCTTTGTCAAGAATCTCCCCTCTCCCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR CAA 90 bp | CCCGGAGAAGCCAGGGATAGATCAACACAGCAGCAGAGGGCTTCCAGGAAGGATGTCTCTGCAAGCAATTaGGGGGTCATCAGTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PGEARDRSTQQQRASRKDVSASN*GVISST Trigger: TGTGGAACTGATGACCCCCAAATTGCTTGCAGAGAC...ATCCTTCCTGGAAGCCCTCTGCTGCTGTGTTGATCTATCCCTGGCTTCTCCGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR CAA 90 bp | CCCGGAGAAGCCAGGGATAGATCAACACAGCAGCAGAGGGCTTCCAGGAAGGATAGAGATGAACCCATCTaGGTCCTTGTCAAATTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGEARDRSTQQQRASRKDRDEPI*VLVKFK Trigger: CTTGAATTTGACAAGGACCAAGATGGGTTCATCTCT...ATCCTTCCTGGAAGCCCTCTGCTGCTGTGTTGATCTATCCCTGGCTTCTCCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR CAA 90 bp | ATACTGGGGCAAGCCTACTCCCACCCTCCATCCTTTAAGGTATTCTGGGTATCCTTGGCATCAAACTCCTaGAAGGCATCTCGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILGQAYSHPPSFKVFWVSLASNS*KASRIS Trigger: GGAGATGCGAGATGCCTTCAAGGAGTTTGATGCCAA...GGATACCCAGAATACCTTAAAGGATGGAGGGTGGGAGTAGGCTTGCCCCAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS-3UTR CAA 90 bp | ATACTGGGGCAAGCCTACTCCCACCCTCCATCCTTTAAGGTATTCTGGGTATCCACAGTGCCATCTCCATaGATATCAGCCTCCTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: ILGQAYSHPPSFKVFWVSTVPSP*ISASCT Trigger: GGTACAGGAGGCTGATATCAATGGAGATGGCACTGT...GGATACCCAGAATACCTTAAAGGATGGAGGGTGGGAGTAGGCTTGCCCCAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
||
| CDS CCA 90 bp | TTCAAGAAATGCTTCCCGGAGCTCATCAAGCTCATCCTGTCCCAGTaGTCTCTCCCGCTGCTTTTCAGCAATGCCTTTTCTCAAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FKKCFPELIKLILSQ*SLPLLFSNAFSQED Trigger: ATCTTCTTGAGAAAAGGCATTGCTGAAAAGCAGCGGGAGAGACCACTGGGACAGGATGAGCTTGATGAGCTCCGGGAAGCATTTCTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005791.14 ENSMUST00000117400.2 |
||
| CDS-3UTR CAA 90 bp | GGCCACCAAGGTTCATTCGGATTTGCTGGCCCAACTCAGTCAACTCCATCTCTGAGAGATGAACCCATCTaGGTCCTTGTCAAATTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GHQGSFGFAGPTQSTPSLRDEPI*VLVKFK Trigger: CTTGAATTTGACAAGGACCAAGATGGGTTCATCTCT...CAGAGATGGAGTTGACTGAGTTGGGCCAGCAAATCCGAATGAACCTTGGTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152995.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGGCATATCTGTGGGTCTATGTTTCATTTCTAATTGGTACAGGAGTCCCTTGGCATCAAACTCCTaGAAGGCATCTCGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PVGISVGLCFISNWYRSPLASNS*KASRIS Trigger: GGAGATGCGAGATGCCTTCAAGGAGTTTGATGCCAA...GGGACTCCTGTACCAATTAGAAATGAAACATAGACCCACAGATATGCCCACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR CAA 90 bp | GGACTTGGAGAAGATTATAGAGTAGATGAACTGGAGGGAGAACCACATAGAGAAGTCTCTGCAAGCAATTaGGGGGTCATCAGTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GLGEDYRVDELEGEPHREVSASN*GVISST Trigger: TGTGGAACTGATGACCCCCAAATTGCTTGCAGAGAC...TTCTCTATGTGGTTCTCCCTCCAGTTCATCTACTCTATAATCTTCTCCAAGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGAATAGGAAACATGTTCCCCAAAGCACACCAATTCACATCATGGTTGCAAACAGTGCCATCTCCATaGATATCAGCCTCCTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: CRIGNMFPKAHQFTSWLQTVPSP*ISASCT Trigger: GGTACAGGAGGCTGATATCAATGGAGATGGCACTGT...TTGCAACCATGATGTGAATTGGTGTGCTTTGGGGAACATGTTTCCTATTCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR CAA 90 bp | CACAACCAAGAGTTGTCTGGAAAGGGGAAACCTCACGTGAAGAACTACCAGAATAGAGATGAACCCATCTaGGTCCTTGTCAAATTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HNQELSGKGKPHVKNYQNRDEPI*VLVKFK Trigger: CTTGAATTTGACAAGGACCAAGATGGGTTCATCTCT...ATTCTGGTAGTTCTTCACGTGAGGTTTCCCCTTTCCAGACAACTCTTGGTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR CAA 90 bp | GGACTTGGAGAAGATTATAGAGTAGATGAACTGGAGGGAGAACCACATAGAGAAATCTCCCCATCTCCATaGGCATCAAACTCCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GLGEDYRVDELEGEPHREISPSP*ASNSLK Trigger: CTTCAAGGAGTTTGATGCCAATGGAGATGGGGAGAT...TTCTCTATGTGGTTCTCCCTCCAGTTCATCTACTCTATAATCTTCTCCAAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGCTTCTATATATGTCTCTGCTCCCAAGAAGCAAAGCAAGTGTTTGCAGTTATCTCCCCATCTCCATaGGCATCAAACTCCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: TCFYICLCSQEAKQVFAVISPSP*ASNSLK Trigger: CTTCAAGGAGTTTGATGCCAATGGAGATGGGGAGAT...AACTGCAAACACTTGCTTTGCTTCTTGGGAGCAGAGACATATATAGAAGCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| CDS TCA 72 bp | TCACAAACTCTTCAAAGTCAACAGTGCCATCTCCATTaGTATCAGCCTCCTGTACCACCTCAGCAATCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SQTLQSQQCHLH*YQPPVPPQQSP Trigger: GGGAGATTGCTGAGGTGGTACAGGAGGCTGATATCAATGGAGATGGCACTGTTGACTTTGAAGAGTTTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005791.14 |
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| CDS TCA 72 bp | AAGTATTACCTTCAAAGTCAACAGTGCCATCTCCATTaGTATCAGCCTCCTGTACCACCTCAGCAATCTCCC | + |
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Preference number: 6 (lower is better) Translates to: KYYLQSQQCHLH*YQPPVPPQQSP Trigger: GGGAGATTGCTGAGGTGGTACAGGAGGCTGATATCAATGGAGATGGCACTGTTGACTTTGAAGGTAATACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117400.2 |
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| CDS CAA 90 bp | CGTTCTCATGAGATTGCCCAAATCCTTGTAAGAGATGAACCCATCTaGGTCCTTGTCAAATTCAAGAAATGCTTCCCGGAGCTCATCAAG | + |
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Preference number: 6 (lower is better) Translates to: RSHEIAQILVRDEPI*VLVKFKKCFPELIK Trigger: CTTGATGAGCTCCGGGAAGCATTTCTTGAATTTGACAAGGACCAAGATGGGTTCATCTCTTACAAGGATTTGGGCAATCTCATGAGAACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005791.14 ENSMUST00000117400.2 |
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