Pregenerated sensors for CABP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029544Ensembl transcript IDs: ENSMUST00000031519.14, ENSMUST00000112112.2, ENSMUST00000112113.8, ENSMUST00000145197.9
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCCCTGGGGCACACATGCTGTGTGGGGTCTGCTGGCCGGCTCCCTaGCCCACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGG | + |
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Preference number: 1 (lower is better) Translates to: CPGAHMLCGVCWPAP*PTQPASSGWAHGTW Trigger: CCAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGTGGGCCAGGGAGCCGGCCAGCAGACCCCACACAGCATGTGTGCCCCAGGGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR GCA 90 bp | CACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGGTGCCTTaGATGTCCTCTACCGGCTTGGCACTGTGGCCTCCTCGCCGGCGG | + |
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Preference number: 1 (lower is better) Translates to: HPASQQRLGTWHLVP*MSSTGLALWPPRRR Trigger: CCGCCGGCGAGGAGGCCACAGTGCCAAGCCGGTAGAGGACATGCAAGGCACCAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR CCA 90 bp | CCCTGGCCCACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTaGTGCCTTGCATGTCCTCTACCGGCTTGGCACTGTGGCCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: PWPTQPASSGWAHGT*CLACPLPAWHCGLL Trigger: GAGGAGGCCACAGTGCCAAGCCGGTAGAGGACATGCAAGGCACCAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGTGGGCCAGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR TCA 90 bp | CCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGGTaGGGCGAGCTCAGCTCTTCTCCCCGCCTGTGGGAGTTGGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: PIRQYILGFRQLLRG*GELSSSPRLWELAD Trigger: GTCTGCCAACTCCCACAGGCGGGGAGAAGAGCTGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031519.14 ENSMUST00000112112.2 ENSMUST00000112113.8 ENSMUST00000145197.9 |
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| 3UTR CCA 90 bp | GGCTGGGCACATGGCACTTGGTGCCTTGCATGTCCTCTACCGGCTTaGCACTGTGGCCTCCTCGCCGGCGGGCGCCCCCTTTTTCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: GWAHGTWCLACPLPA*HCGLLAGGRPLFPV Trigger: AACTGGAAAAAGGGGGCGCCCGCCGGCGAGGAGGCCACAGTGCCAAGCCGGTAGAGGACATGCAAGGCACCAAGTGCCATGTGCCCAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR CCA 90 bp | ACATGGCACTTGGTGCCTTGCATGTCCTCTACCGGCTTGGCACTGTaGCCTCCTCGCCGGCGGGCGCCCCCTTTTTCCAGTTGCAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: TWHLVPCMSSTGLAL*PPRRRAPPFSSCKS Trigger: ACTCTTGCAACTGGAAAAAGGGGGCGCCCGCCGGCGAGGAGGCCACAGTGCCAAGCCGGTAGAGGACATGCAAGGCACCAAGTGCCATGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR CCA 90 bp | CCTCTATGTCCCGGTGTCCCACCTGATGACCCAGGAGCTTCCTCATaGCCTCTCGAAGCTCGCTCGTACTTATCTCCCCGTCACCGTTGG | + |
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Preference number: 1 (lower is better) Translates to: PLCPGVPPDDPGASS*PLEARSYLSPRHRW Trigger: CCAACGGTGACGGGGAGATAAGTACGAGCGAGCTTCGAGAGGCCATGAGGAAGCTCCTGGGTCATCAGGTGGGACACCGGGACATAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145197.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGCTCAGCTCTTCTCCCCGTGCTGGCCGGCTCCCTaGCCCACCCAGCCAGCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: PGLSAATAGVRRAQLFSPCWPAP*PTQPAS Trigger: GCTGGCTGGCTGGGTGGGCCAGGGAGCCGGCCAGCA...CGGGGAGAAGAGCTGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR CAA 90 bp | CCACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGGTGCCTaGCATGTCCTCTACCGGCTTGGCACTGTGGCCTCCTCGCCGGCG | + |
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Preference number: 2 (lower is better) Translates to: PPSQPAAAGHMALGA*HVLYRLGTVASSPA Trigger: CGCCGGCGAGGAGGCCACAGTGCCAAGCCGGTAGAGGACATGCAAGGCACCAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGGTGCCTTGCATGTCCTCTGGCACCTCCCCAGGGTaGAGGCAGGCCCCATCCGCC | + |
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Preference number: 2 (lower is better) Translates to: PASQQRLGTWHLVPCMSSGTSPG*RQAPSA Trigger: GGCGGATGGGGCCTGCCTGCACCCTGGGGAGGTGCC...AGAGGACATGCAAGGCACCAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR-3UTR CCA 90 bp | CGGCTCCCTGGCCCACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGGTTGTCCTCTACCGGCTTaGCACTGTGGCCTCCTCGCC | + |
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Preference number: 2 (lower is better) Translates to: RLPGPPSQPAAAGHMALGCPLPA*HCGLLA Trigger: GGCGAGGAGGCCACAGTGCCAAGCCGGTAGAGGACA...ACCAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGTGGGCCAGGGAGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGCCCGCCTGTGGGAGTTaGCAGACCTGGAGGAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: VQAGPIRQYILGFRQLLRPACGS*QTWRSP Trigger: GGGGCTCCTCCAGGTCTGCCAACTCCCACAGGCGGG...CCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031519.14 ENSMUST00000112112.2 ENSMUST00000112113.8 ENSMUST00000145197.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGGGCACACATGCTGTGTaGGGTCTGCTGGCCGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: AGRPHPPVHPGLSAATAGGTHAV*GLLAGS Trigger: GGAGCCGGCCAGCAGACCCCACACAGCATGTGTGCC...CCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGC 68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR CAA 90 bp | CGGCTGGGCACATGGCACTTGGTGCCTTGCATGTCCTCTACCGGCTaGGCACTGTGGCCTCCTCGCCGGCGGGCGCCCCCTTTTTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: RLGTWHLVPCMSSTG*ALWPPRRRAPPFSS Trigger: ACTGGAAAAAGGGGGCGCCCGCCGGCGAGGAGGCCACAGTGCCAAGCCGGTAGAGGACATGCAAGGCACCAAGTGCCATGTGCCCAGCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR-3UTR CCA 90 bp | TCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGCTCACCCGCCTGTGGGAGTTaGCAGACCTGGAGGAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SASTSWAFGSYCGGEASSPACGS*QTWRSP Trigger: GGGGCTCCTCCAGGTCTGCCAACTCCCACAGGCGGG...TGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031519.14 ENSMUST00000112112.2 ENSMUST00000112113.8 ENSMUST00000145197.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGCTCAGCTCTTCTCCCCGCAGCGGCTGGGCACATaGCACTTGGTGCCTTGCATG | + |
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Preference number: 2 (lower is better) Translates to: PGLSAATAGVRRAQLFSPQRLGT*HLVPCM Trigger: CATGCAAGGCACCAAGTGCCATGTGCCCAGCCGCTG...CGGGGAGAAGAGCTGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR-3UTR TCA 90 bp | GCCGGCTCCCTGGCCCACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGCAGTTGCAAGAGTTGTaGGTCTTTCACAGTGCGGAG | + |
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Preference number: 2 (lower is better) Translates to: AGSLAHPASQQRLGTWHLQLQEL*VFHSAE Trigger: CTCCGCACTGTGAAAGACTCACAACTCTTGCAACTG...CAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGTGGGCCAGGGAGCCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGTCTTCTCCCCGCCTGTaGGAGTTGGCAGACCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: QAPSASTSWAFGSYCGGESSPRL*ELADLE Trigger: CTCCAGGTCTGCCAACTCCCACAGGCGGGGAGAAGA...CTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000031519.14 ENSMUST00000112112.2 ENSMUST00000112113.8 ENSMUST00000145197.9 |
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| 3UTR-3UTR CCA 90 bp | ACATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGCTCAGCTCTTCTCGGCACACATGCTGTGTaGGGTCTGCTGGCCGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: TSWAFGSYCGGEASSALLGTHAV*GLLAGS Trigger: GGAGCCGGCCAGCAGACCCCACACAGCATGTGTGCC...GAGAAGAGCTGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGCCAGGTCCCGGCAGTTaGTGTAACCATCCTTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: AGRPHPPVHPGLSAATAGPGPGS*CNHPCL Trigger: AAGACAAGGATGGTTACATCAACTGCCGGGACCTGG...CCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145197.9 |
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| 3UTR-3UTR GCA 90 bp | GCCGGCTCCCTGGCCCACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGCCCCCTTTTTCCAGTTaGAAGAGTTGTGAGTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: AGSLAHPASQQRLGTWHLPPFSS*KSCESF Trigger: GAAAGACTCACAACTCTTGCAACTGGAAAAAGGGGG...CAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGTGGGCCAGGGAGCCGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGGCTAGGCGAGCTGGGACGGGCATCAGGAAGGCGCTGAGAGGCTCTGCCCAGTTGCAAGAGTTGTaGGTCTTTCACAGTGCGGAG | + |
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Preference number: 2 (lower is better) Translates to: QRARRAGTGIRKALRGSAQLQEL*VFHSAE Trigger: CTCCGCACTGTGAAAGACTCACAACTCTTGCAACTG...GGCAGAGCCTCTCAGCGCCTTCCTGATGCCCGTCCCAGCTCGCCTAGCCCTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGCCCCCTTTTTCCAGTTaGAAGAGTTGTGAGTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: AGRPHPPVHPGLSAATAGPPFSS*KSCESF Trigger: GAAAGACTCACAACTCTTGCAACTGGAAAAAGGGGG...CCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGGTATCAAACTCCCGAAAGGCGTCTCTCAGCTCCTTTACACCAATCATATCCCCGCCTGTGGGAGTTaGCAGACCTGGAGGAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: VGIKLPKGVSQLLYTNHIPACGS*QTWRSP Trigger: GGGGCTCCTCCAGGTCTGCCAACTCCCACAGGCGGG...GATATGATTGGTGTAAAGGAGCTGAGAGACGCCTTTCGGGAGTTTGATACCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145197.9 |
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| 3UTR-3UTR CAA 90 bp | CGGCTCCCTGGCCCACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGGTATGTCCTCTACCGGCTaGGCACTGTGGCCTCCTCGC | + |
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Preference number: 3 (lower is better) Translates to: RLPGPPSQPAAAGHMALGMSSTG*ALWPPR Trigger: GCGAGGAGGCCACAGTGCCAAGCCGGTAGAGGACAT...ACCAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGTGGGCCAGGGAGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR CCA 72 bp | CCAGGGTGCAGGCAGGCCCCATCCGCCAGTACATCCTaGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGC | + |
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Preference number: 3 (lower is better) Translates to: PGCRQAPSASTS*AFGSYCGGEAS Trigger: GCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACCCTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031519.14 ENSMUST00000112112.2 ENSMUST00000112113.8 ENSMUST00000145197.9 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGATGTCCTCTACCGGCTaGGCACTGTGGCCTCCTCGC | + |
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Preference number: 3 (lower is better) Translates to: AGRPHPPVHPGLSAATAGMSSTG*ALWPPR Trigger: GCGAGGAGGCCACAGTGCCAAGCCGGTAGAGGACAT...CCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR GCA 72 bp | AGCTGGGACGGGCATCAGGAAGGCGCTGAGAGGCTCTaGCCTGGGGCACACATGCTGTGTGGGGTCTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: SWDGHQEGAERL*PGAHMLCGVCW Trigger: CCAGCAGACCCCACACAGCATGTGTGCCCCAGGGCAGAGCCTCTCAGCGCCTTCCTGATGCCCGTCCCAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR CCA 72 bp | TTGGTGCCTTGCATGTCCTCTACCGGCTTGGCACTGTaGCCTCCTCGCCGGCGGGCGCCCCCTTTTTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: LVPCMSSTGLAL*PPRRRAPPFSS Trigger: ACTGGAAAAAGGGGGCGCCCGCCGGCGAGGAGGCCACAGTGCCAAGCCGGTAGAGGACATGCAAGGCACCAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR CCA 72 bp | ACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTaGTGCCTTGCATGTCCTCTACCGGCTTGGCACTGT | + |
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Preference number: 3 (lower is better) Translates to: TQPASSGWAHGT*CLACPLPAWHC Trigger: ACAGTGCCAAGCCGGTAGAGGACATGCAAGGCACCAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| 3UTR CCA 72 bp | CCCGGTGTCCCACCTGATGACCCAGGAGCTTCCTCATaGCCTCTCGAAGCTCGCTCGTACTTATCTCCCCGT | + |
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Preference number: 3 (lower is better) Translates to: PGVPPDDPGASS*PLEARSYLSPR Trigger: ACGGGGAGATAAGTACGAGCGAGCTTCGAGAGGCCATGAGGAAGCTCCTGGGTCATCAGGTGGGACACCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145197.9 |
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| 3UTR TCA 72 bp | CCATGGTGCGCATGCAGTTCCCCAGGTCCCGGCAGTTaGTGTAACCATCCTTGTCTTTGTCAAATTCTCGGA | + |
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Preference number: 3 (lower is better) Translates to: PWCACSSPGPGS*CNHPCLCQILG Trigger: TCCGAGAATTTGACAAAGACAAGGATGGTTACATCAACTGCCGGGACCTGGGGAACTGCATGCGCACCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145197.9 |
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| CDS-3UTR CCA 90 bp | GCCGGCTCCCTGGCCCACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGATGGGGCGCAGCCGGTaGAGGAACGGGTCCGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: AGSLAHPASQQRLGTWHLMGRSR*RNGSAS Trigger: CGAGGCGGACCCGTTCCTCCACCGGCTGCGCCCCAT...CAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGTGGGCCAGGGAGCCGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS-3UTR TCA 90 bp | GCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGGGCCGAAGGCGGAGCTaGGCATGGGGCGCAGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: AGRPHPPVHPGLSAATAGGRRRS*AWGAAG Trigger: ACCGGCTGCGCCCCATGCTCAGCTCCGCCTTCGGCC...CCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGC 71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS-3UTR GCA 90 bp | CGGCTCCCTGGCCCACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGGTAGCCCATGGTGCGCATaGAGTTCCCCAGGTCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: RLPGPPSQPAAAGHMALGSPWCA*SSPGPG Trigger: GCCGGGACCTGGGGAACTGCATGCGCACCATGGGCT...ACCAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGTGGGCCAGGGAGCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| CDS-3UTR GCA 90 bp | CATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGCTCAGCTCTTCTCCCCCTGGCCGCTTAAATaGGGCCCCGTCGCCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: HPGLSAATAGVRRAQLFSPWPLK*GPVAAA Trigger: GGCGGCGGCGACGGGGCCGCATTTAAGCGGCCAGGG...GGAGAAGAGCTGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS-3UTR CCA 90 bp | CATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGCTCAGCTCTTCTCCGCGGGCGCCGTCCCCTaGCCGCTTAAATGCGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: HPGLSAATAGVRRAQLFSAGAVP*PLKCGP Trigger: GGGGCCGCATTTAAGCGGCCAGGGGACGGCGCCCGC...GGAGAAGAGCTGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS-3UTR TCA 90 bp | CGGCTCCCTGGCCCACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGGTCCAGCAGGTTGTGCATaGCCGCACAGTTCTGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RLPGPPSQPAAAGHMALGPAGCA*PHSSGP Trigger: TGGCCCAGAACTGTGCGGTCATGCACAACCTGCTGG...ACCAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGTGGGCCAGGGAGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031519.14 |
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| CDS-3UTR GCA 90 bp | GCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGAGCCCATGGTGCGCATaGAGTTCCCCAGGTCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: AGRPHPPVHPGLSAATAGSPWCA*SSPGPG Trigger: GCCGGGACCTGGGGAACTGCATGCGCACCATGGGCT...CCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031519.14 ENSMUST00000112112.2 ENSMUST00000112113.8 |
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| CDS-3UTR GCA 90 bp | CGGCTCCCTGGCCCACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGGTGGACCCAGCAGGTTGTaGATGACCGCACAGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RLPGPPSQPAAAGHMALGGPSRL*MTAQFW Trigger: CCAGAACTGTGCGGTCATGCACAACCTGCTGGGTCC...ACCAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGTGGGCCAGGGAGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031519.14 |
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| CDS-3UTR GCA 90 bp | GGGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCAGCCCATGGTGCGCATaGAGTTCCCCAGGTCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: GCRQAPSASTSWAFGSYCSPWCA*SSPGPG Trigger: GCCGGGACCTGGGGAACTGCATGCGCACCATGGGCT...GCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031519.14 ENSMUST00000112112.2 ENSMUST00000112113.8 |
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| CDS-3UTR CCA 90 bp | AGCTGGGACGGGCATCAGGAAGGCGCTGAGAGGCTCTGCCCTGGGGCACACATGGGCCAGCATCATGAGTaGTCCATGGAGCTCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: SWDGHQEGAERLCPGAHMGQHHE*SMELAA Trigger: GGCGGCGAGCTCCATGGACCACTCATGATGCTGGCC...CATGTGTGCCCCAGGGCAGAGCCTCTCAGCGCCTTCCTGATGCCCGTCCCAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031519.14 |
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| CDS-3UTR TCA 90 bp | AGGCCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGGTCTGGGCCAGCATCATaGGTGGTCCATGGAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: RPHPPVHPGLSAATAGVRSGPAS*VVHGAR Trigger: GCGAGCTCCATGGACCACTCATGATGCTGGCCCAGA...CCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000145197.9 |
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| CDS-3UTR CCA 90 bp | CAGGGTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGGCCAGCATCATGAGTaGTCCATGGAGCTCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: QGAGRPHPPVHPGLSAATGQHHE*SMELAA Trigger: GGCGGCGAGCTCCATGGACCACTCATGATGCTGGCC...AGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCACCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000145197.9 |
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| CDS-3UTR CCA 90 bp | CCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGACCAGGAGCTTCCTCATaGCCTCTCGAAGCTCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PHPPVHPGLSAATAGVRRPGASS*PLEARS Trigger: CGAGCGAGCTTCGAGAGGCCATGAGGAAGCTCCTGG...TCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031519.14 ENSMUST00000112112.2 ENSMUST00000112113.8 |
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| CDS-3UTR CCA 90 bp | GTGCAGGCAGGCCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGCCAGGAGCTTCCTCATaGCCTCTCGAAGCTCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VQAGPIRQYILGFRQLLRPGASS*PLEARS Trigger: CGAGCGAGCTTCGAGAGGCCATGAGGAAGCTCCTGG...CCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCTGCCTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031519.14 ENSMUST00000112112.2 ENSMUST00000112113.8 |
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| CDS-3UTR TCA 90 bp | GCCGGCTCCCTGGCCCACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGTTCATGTTGATCTGCTaGGACAGCTCAATGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: AGSLAHPASQQRLGTWHLFMLIC*DSSMSS Trigger: GGAGCTCATTGAGCTGTCTCAGCAGATCAACATGAA...CAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGTGGGCCAGGGAGCCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| CDS-3UTR GCA 90 bp | GCCGGCTCCCTGGCCCACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGTACACCAATCATATCTaGCGTCTCCGCCAGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGSLAHPASQQRLGTWHLYTNHI*RLRQEF Trigger: AAACTCCTGGCGGAGACGGCAGATATGATTGGTGTA...CAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGTGGGCCAGGGAGCCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| CDS-3UTR CCA 90 bp | CCTGGCCCACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGGTGCCTTGCTGGTCTTCTCCTCCTaGCGCATCTTTCTTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGPPSQPAAAGHMALGALLVFSS*RIFLER Trigger: CCTCTCAAGAAAGATGCGCCAGGAGGAGAAGACCAG...CAAGGCACCAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGTGGGCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031519.14 |
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| CDS-3UTR CCA 90 bp | TCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGCTCACCAGGAGCTTCCTCATaGCCTCTCGAAGCTCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SASTSWAFGSYCGGEASSPGASS*PLEARS Trigger: CGAGCGAGCTTCGAGAGGCCATGAGGAAGCTCCTGG...TGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031519.14 ENSMUST00000112112.2 ENSMUST00000112113.8 |
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| CDS-3UTR TCA 90 bp | ACATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGCTCAGCTCTTCTCTCTGGGCCAGCATCATaGGTGGTCCATGGAGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TSWAFGSYCGGEASSALLSGPAS*VVHGAR Trigger: GCGAGCTCCATGGACCACTCATGATGCTGGCCCAGA...GAGAAGAGCTGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000145197.9 |
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| CDS-3UTR CCA 90 bp | TGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGCTCAGCTCTTCTCCCCGCCCTGGTCTTCTCCTCCTaGCGCATCTTTCTTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WAFGSYCGGEASSALLPALVFSS*RIFLER Trigger: CCTCTCAAGAAAGATGCGCCAGGAGGAGAAGACCAG...GGCGGGGAGAAGAGCTGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000145197.9 |
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| CDS-3UTR TCA 90 bp | AGCTGGGACGGGCATCAGGAAGGCGCTGAGAGGCTCTGCCCTGGGGCACACATGCCAGGTCCCGGCAGTTaGTGTAACCATCCTTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SWDGHQEGAERLCPGAHMPGPGS*CNHPCL Trigger: AAGACAAGGATGGTTACATCAACTGCCGGGACCTGG...CATGTGTGCCCCAGGGCAGAGCCTCTCAGCGCCTTCCTGATGCCCGTCCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| CDS-3UTR CCA 90 bp | TGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGCTCAGCTCTTCTCCCCGCCTCATCAAAATCCACGTaGCCACCCAGGTTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WAFGSYCGGEASSALLPASSKST*PPRFML Trigger: CAACATGAACCTGGGTGGCCACGTGGATTTTGATGA...GGCGGGGAGAAGAGCTGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031519.14 ENSMUST00000112112.2 ENSMUST00000112113.8 |
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| CDS-3UTR TCA 90 bp | CATGGTGCGCATGCAGTTCCCCAGGTCCCGGCAGTTGATGTAACCATCCTTGTCCCAGCAGGTTGTGCATaGCCGCACAGTTCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HGAHAVPQVPAVDVTILVPAGCA*PHSSGP Trigger: TGGCCCAGAACTGTGCGGTCATGCACAACCTGCTGG...GACAAGGATGGTTACATCAACTGCCGGGACCTGGGGAACTGCATGCGCACCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145197.9 |
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| CDS-3UTR TCA 90 bp | CAGGCCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGTTCATGTTGATCTGCTaGGACAGCTCAATGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QAPSASTSWAFGSYCGGEFMLIC*DSSMSS Trigger: GGAGCTCATTGAGCTGTCTCAGCAGATCAACATGAA...CTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031519.14 ENSMUST00000112112.2 ENSMUST00000112113.8 |
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| CDS-3UTR GCA 90 bp | CCCAGGAGCTTCCTCATGGCCTCTCGAAGCTCGCTCGTACTTATCTCCCCGTCAGGACCCAGCAGGTTGTaGATGACCGCACAGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRSFLMASRSSLVLISPSGPSRL*MTAQFW Trigger: CCAGAACTGTGCGGTCATGCACAACCTGCTGGGTCC...TGACGGGGAGATAAGTACGAGCGAGCTTCGAGAGGCCATGAGGAAGCTCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145197.9 |
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| CDS-3UTR CCA 90 bp | CAGGCCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGTCATCAAAATCCACGTaGCCACCCAGGTTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QAPSASTSWAFGSYCGGESSKST*PPRFML Trigger: CAACATGAACCTGGGTGGCCACGTGGATTTTGATGA...CTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031519.14 ENSMUST00000112112.2 ENSMUST00000112113.8 |
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| CDS-3UTR CCA 90 bp | AGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGCTCAGCTCTTATGACCGCACAGTTCTaGGCCAGCATCATGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: STSWAFGSYCGGEASSALMTAQF*ASIMSG Trigger: ACCACTCATGATGCTGGCCCAGAACTGTGCGGTCAT...AAGAGCTGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000145197.9 |
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| CDS-3UTR CCA 90 bp | ACCCAGCCAGCCAGCAGCGGCTGGGCACATGGCACTTGGTGCCTTGCATGTCCTTCATCAAAATCCACGTaGCCACCCAGGTTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TQPASSGWAHGTWCLACPSSKST*PPRFML Trigger: CAACATGAACCTGGGTGGCCACGTGGATTTTGATGA...AGGACATGCAAGGCACCAAGTGCCATGTGCCCAGCCGCTGCTGGCTGGCTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| CDS-3UTR CCA 90 bp | AGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGCTCAGCTCTTTCTTGGACTCGCTCTTaGCAATGTGCGAGCTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: STSWAFGSYCGGEASSALSWTRS*QCASSS Trigger: CGATGAGCTCGCACATTGCCAAGAGCGAGTCCAAGA...AAGAGCTGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS-3UTR TCA 90 bp | ACATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGCTCAGCTCTTCTCTTCATGTTGATCTGCTaGGACAGCTCAATGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSWAFGSYCGGEASSALLFMLIC*DSSMSS Trigger: GGAGCTCATTGAGCTGTCTCAGCAGATCAACATGAA...GAGAAGAGCTGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031519.14 ENSMUST00000112112.2 ENSMUST00000112113.8 |
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| CDS-3UTR GCA 90 bp | ACATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGCTCAGCTCTTCTCTACACCAATCATATCTaGCGTCTCCGCCAGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TSWAFGSYCGGEASSALLYTNHI*RLRQEF Trigger: AAACTCCTGGCGGAGACGGCAGATATGATTGGTGTA...GAGAAGAGCTGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031519.14 ENSMUST00000112112.2 ENSMUST00000112113.8 |
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| CDS-3UTR GCA 90 bp | CCTCGCCGGCGGGCGCCCCCTTTTTCCAGTTGCAAGAGTTGTGAGTCTTTCACATACACCAATCATATCTaGCGTCTCCGCCAGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRRRAPPFSSCKSCESFTYTNHI*RLRQEF Trigger: AAACTCCTGGCGGAGACGGCAGATATGATTGGTGTA...TGTGAAAGACTCACAACTCTTGCAACTGGAAAAAGGGGGCGCCCGCCGGCGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000112113.8 |
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| CDS GCA 90 bp | GCCGCCGCCTTGAGCAGCGACGTCTTGGACTCGCTCTTGGCAATGTaGGAGCTCATCGCGGCGGGGCCCGCGCTCGCATGGCCCGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: AAALSSDVLDSLLAM*ELIAAGPALAWPGG Trigger: CCCGCCGGGCCATGCGAGCGCGGGCCCCGCCGCGATGAGCTCGCACATTGCCAAGAGCGAGTCCAAGACGTCGCTGCTCAAGGCGGCGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS CCA 90 bp | GATCTGTCCTGGCCGAAGGCGGAGCTGAGCATGGGGCGCAGCCGGTaGAGGAACGGGTCCGCCTCGGGGGTGCCAGCAGGAGCCGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DLSWPKAELSMGRSR*RNGSASGVPAGAGS Trigger: GGACCCGGCTCCTGCTGGCACCCCCGAGGCGGACCCGTTCCTCCACCGGCTGCGCCCCATGCTCAGCTCCGCCTTCGGCCAGGACAGATC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS TCA 90 bp | AGCTGTGGCGGGGAGCCCGGCTGCCCCCGCTCGCCGCCGCCGCCTTaGGCAGCGACGTCTTGGACTCGCTCTTGGCAATGTGCGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCGGEPGCPRSPPPP*AATSWTRSWQCASS Trigger: TGAGCTCGCACATTGCCAAGAGCGAGTCCAAGACGTCGCTGCTCAAGGCGGCGGCGGCGAGCGGGGGCAGCCGGGCTCCCCGCCACAGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS TCA 90 bp | CAATCTCCTCTGGTCGTAACGATCTGTCCTGGCCGAAGGCGGAGCTaGGCATGGGGCGCAGCCGGTGGAGGAACGGGTCCGCCTCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QSPLVVTICPGRRRS*AWGAAGGGTGPPRG Trigger: CCCCCGAGGCGGACCCGTTCCTCCACCGGCTGCGCCCCATGCTCAGCTCCGCCTTCGGCCAGGACAGATCGTTACGACCAGAGGAGATTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS CCA 90 bp | TTGTGCATGACCGCACAGTTCTGGGCCAGCATCATGAGTGGTCCATaGAGCTCGCCGCCATCCGCCAGCCCGTCCTCGCTTGTCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: LCMTAQFWASIMSGP*SSPPSASPSSLVCT Trigger: GGTGCAGACAAGCGAGGACGGGCTGGCGGATGGCGGCGAGCTCCATGGACCACTCATGATGCTGGCCCAGAACTGTGCGGTCATGCACAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000145197.9 |
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| CDS CCA 90 bp | GCCTCTCGGAGCTCTTCAATCTCCTCTGGTCGTAACGATCTGTCCTaGCCGAAGGCGGAGCTGAGCATGGGGCGCAGCCGGTGGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ASRSSSISSGRNDLS*PKAELSMGRSRWRN Trigger: GTTCCTCCACCGGCTGCGCCCCATGCTCAGCTCCGCCTTCGGCCAGGACAGATCGTTACGACCAGAGGAGATTGAAGAGCTCCGAGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS-3UTR CAA 90 bp | TGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCGAGCTCAGCTCTTCTCCCCGCCGTCTTGGACTCGCTCTaGGCAATGTGCGAGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: WAFGSYCGGEASSALLPAVLDSL*AMCELI Trigger: GATGAGCTCGCACATTGCCAAGAGCGAGTCCAAGAC...GGCGGGGAGAAGAGCTGAGCTCGCCTCACCCCCGCAGTAGCTGCCGAAAGCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS CCA 90 bp | AAAATGCAGGCGGGACCCAGCAGGTTGTGCATGACCGCACAGTTCTaGGCCAGCATCATGAGTGGTCCATGGAGCTCGCCGCCATCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: KMQAGPSRLCMTAQF*ASIMSGPWSSPPSA Trigger: GGCGGATGGCGGCGAGCTCCATGGACCACTCATGATGCTGGCCCAGAACTGTGCGGTCATGCACAACCTGCTGGGTCCCGCCTGCATTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000145197.9 |
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| CDS-3UTR CAA 90 bp | CAAAGGGCTAGGCGAGCTGGGACGGGCATCAGGAAGGCGCTGAGAGGCTCTGCCCCTGGCGCATCTTTCTaGAGAGGTTTCTTAGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QRARRAGTGIRKALRGSAPGASF*RGFLVA Trigger: CGCCACTAAGAAACCTCTCAAGAAAGATGCGCCAGG...GGCAGAGCCTCTCAGCGCCTTCCTGATGCCCGTCCCAGCTCGCCTAGCCCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031519.14 |
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| CDS-3UTR CAA 90 bp | AGGCCCCATCCGCCAGTACATCCTGGGCTTTCGGCAGCTACTGCGGGGGTGAGGCCTGGCGCATCTTTCTaGAGAGGTTTCTTAGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RPHPPVHPGLSAATAGVRPGASF*RGFLVA Trigger: CGCCACTAAGAAACCTCTCAAGAAAGATGCGCCAGG...CCTCACCCCCGCAGTAGCTGCCGAAAGCCCAGGATGTACTGGCGGATGGGGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000145197.9 |
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| CDS-3UTR CAA 90 bp | CCTCCTCGCCGGCGGGCGCCCCCTTTTTCCAGTTGCAAGAGTTGTGAGTCTTTCTTGAGCAGCGACGTCTaGGACTCGCTCTTGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: PPRRRAPPFSSCKSCESFLSSDV*DSLLAM Trigger: CATTGCCAAGAGCGAGTCCAAGACGTCGCTGCTCAA...GAAAGACTCACAACTCTTGCAACTGGAAAAAGGGGGCGCCCGCCGGCGAGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS-3UTR CAA 90 bp | GTGAGGCGAGCTCAGCTCTTCTCCCCGCCTGTGGGAGTTGGCAGACCTGGAGGAACGATCTGTCCTTTCTaGAGAGGTTTCTTAGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VRRAQLFSPPVGVGRPGGTICPF*RGFLVA Trigger: CGCCACTAAGAAACCTCTCAAGAAAGGACAGATCGT...TCCTCCAGGTCTGCCAACTCCCACAGGCGGGGAGAAGAGCTGAGCTCGCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112112.2 |
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| CDS GCA 90 bp | GCAAAACCCTTTCGGAGAAAAATGCAGGCGGGACCCAGCAGGTTGTaGATGACCGCACAGTTCTGGGCCAGCATCATGAGTGGTCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: AKPFRRKMQAGPSRL*MTAQFWASIMSGPW Trigger: CCATGGACCACTCATGATGCTGGCCCAGAACTGTGCGGTCATGCACAACCTGCTGGGTCCCGCCTGCATTTTTCTCCGAAAGGGTTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000145197.9 |
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| CDS CCA 72 bp | AAGCCCGAGGACGCGCTGCAGGCGGGCGCCGTCCCCTaGCCGCTTAAATGCGGCCCCGTCGCCGCCGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: KPEDALQAGAVP*PLKCGPVAAAH Trigger: ATGGGCGGCGGCGACGGGGCCGCATTTAAGCGGCCAGGGGACGGCGCCCGCCTGCAGCGCGTCCTCGGGCTT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS CAA 90 bp | GCCCGGCTGCCCCCGCTCGCCGCCGCCGCCTTGAGCAGCGACGTCTaGGACTCGCTCTTGGCAATGTGCGAGCTCATCGCGGCGGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ARLPPLAAAALSSDV*DSLLAMCELIAAGP Trigger: GGGCCCCGCCGCGATGAGCTCGCACATTGCCAAGAGCGAGTCCAAGACGTCGCTGCTCAAGGCGGCGGCGGCGAGCGGGGGCAGCCGGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS CCA 72 bp | TGGCCGAAGGCGGAGCTGAGCATGGGGCGCAGCCGGTaGAGGAACGGGTCCGCCTCGGGGGTGCCAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WPKAELSMGRSR*RNGSASGVPAG Trigger: TCCTGCTGGCACCCCCGAGGCGGACCCGTTCCTCCACCGGCTGCGCCCCATGCTCAGCTCCGCCTTCGGCCA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS CAA 90 bp | CCGCTCGCCGCCGCCGCCTTGAGCAGCGACGTCTTGGACTCGCTCTaGGCAATGTGCGAGCTCATCGCGGCGGGGCCCGCGCTCGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: PLAAAALSSDVLDSL*AMCELIAAGPALAW Trigger: CCATGCGAGCGCGGGCCCCGCCGCGATGAGCTCGCACATTGCCAAGAGCGAGTCCAAGACGTCGCTGCTCAAGGCGGCGGCGGCGAGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS CAA 72 bp | GCCGCCGCCTTGAGCAGCGACGTCTTGGACTCGCTCTaGGCAATGTGCGAGCTCATCGCGGCGGGGCCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: AAALSSDVLDSL*AMCELIAAGPA Trigger: CGCGGGCCCCGCCGCGATGAGCTCGCACATTGCCAAGAGCGAGTCCAAGACGTCGCTGCTCAAGGCGGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS CAA 72 bp | CCCCCGCTCGCCGCCGCCGCCTTGAGCAGCGACGTCTaGGACTCGCTCTTGGCAATGTGCGAGCTCATCGCG | + |
|
Preference number: 6 (lower is better) Translates to: PPLAAAALSSDV*DSLLAMCELIA Trigger: CGCGATGAGCTCGCACATTGCCAAGAGCGAGTCCAAGACGTCGCTGCTCAAGGCGGCGGCGGCGAGCGGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS GCA 72 bp | TTGAGCAGCGACGTCTTGGACTCGCTCTTGGCAATGTaGGAGCTCATCGCGGCGGGGCCCGCGCTCGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: LSSDVLDSLLAM*ELIAAGPALAW Trigger: CCATGCGAGCGCGGGCCCCGCCGCGATGAGCTCGCACATTGCCAAGAGCGAGTCCAAGACGTCGCTGCTCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112113.8 |
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| CDS CCA 72 bp | ACCGCACAGTTCTGGGCCAGCATCATGAGTGGTCCATaGAGCTCGCCGCCATCCGCCAGCCCGTCCTCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TAQFWASIMSGP*SSPPSASPSSL Trigger: AAGCGAGGACGGGCTGGCGGATGGCGGCGAGCTCCATGGACCACTCATGATGCTGGCCCAGAACTGTGCGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000145197.9 |
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| CDS CCA 72 bp | GCGGGACCCAGCAGGTTGTGCATGACCGCACAGTTCTaGGCCAGCATCATGAGTGGTCCATGGAGCTCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AGPSRLCMTAQF*ASIMSGPWSSP Trigger: CGGCGAGCTCCATGGACCACTCATGATGCTGGCCCAGAACTGTGCGGTCATGCACAACCTGCTGGGTCCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000145197.9 |
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| CDS GCA 72 bp | TTTCGGAGAAAAATGCAGGCGGGACCCAGCAGGTTGTaGATGACCGCACAGTTCTGGGCCAGCATCATGAGT | + |
|
Preference number: 6 (lower is better) Translates to: FRRKMQAGPSRL*MTAQFWASIMS Trigger: ACTCATGATGCTGGCCCAGAACTGTGCGGTCATGCACAACCTGCTGGGTCCCGCCTGCATTTTTCTCCGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031519.14 ENSMUST00000145197.9 |
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| CDS CAA 72 bp | TCAATCTCCTCTGGTCGTAACGATCTGTCGTACAGGTaGTCTGTTCTCAGCAAAACCCTTTCGGAGAAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SISSGRNDLSYR*SVLSKTLSEKN Trigger: ATTTTTCTCCGAAAGGGTTTTGCTGAGAACAGACAACCTGTACGACAGATCGTTACGACCAGAGGAGATTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145197.9 |
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