Pregenerated sensors for CABLES2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038990Ensembl transcript IDs: ENSMUST00000108891.2
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTAGGTGGTCGGTGTCAGGCTTGAGGACGAGCATCTCTGGGACATaGGACTGGAACCAAGCGGTGGCTGGCGTCTGCCAGGCTGGTGAC | + |
|
Preference number: 1 (lower is better) Translates to: PRWSVSGLRTSISGT*DWNQAVAGVCQAGD Trigger: GTCACCAGCCTGGCAGACGCCAGCCACCGCTTGGTTCCAGTCTCATGTCCCAGAGATGCTCGTCCTCAAGCCTGACACCGACCACCTAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR CCA 90 bp | CACAGCTGTGTCCTGTTGAGCGCTGCGGGTGCAGCACCAGGTCTGTaGCATTGGGTCACAGTCCAGCTGGACACCATGGATATACCTCAG | + |
|
Preference number: 1 (lower is better) Translates to: HSCVLLSAAGAAPGL*HWVTVQLDTMDIPQ Trigger: CTGAGGTATATCCATGGTGTCCAGCTGGACTGTGACCCAATGCCACAGACCTGGTGCTGCACCCGCAGCGCTCAACAGGACACAGCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR TCA 90 bp | CTGGACATACACCACATTCTGAGGTCTGACACAGCTGTGTCCTGTTaGGCGCTGCGGGTGCAGCACCAGGTCTGTGGCATTGGGTCACAG | + |
|
Preference number: 1 (lower is better) Translates to: LDIHHILRSDTAVSC*ALRVQHQVCGIGSQ Trigger: CTGTGACCCAATGCCACAGACCTGGTGCTGCACCCGCAGCGCTCAACAGGACACAGCTGTGTCAGACCTCAGAATGTGGTGTATGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR GCA 90 bp | TCAAGAGCCCACAGTCAGTGGTTGTCCAGTGACAGGGAAAAGCTGTaGTGGCAGGAGGCAGCAGGGGTTGGCCAAAGCACTGCTGTGCAT | + |
|
Preference number: 1 (lower is better) Translates to: SRAHSQWLSSDREKL*WQEAAGVGQSTAVH Trigger: ATGCACAGCAGTGCTTTGGCCAACCCCTGCTGCCTCCTGCCAGCACAGCTTTTCCCTGTCACTGGACAACCACTGACTGTGGGCTCTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR CCA 90 bp | AAGGAAGCCAAGCTGCCGTGGGTTGTGAGGGGCAAGTGCAGTTACTaGAGGAGGGACAGGAACACTAGTCCTCTAGCCAAGCTACTCAGC | + |
|
Preference number: 1 (lower is better) Translates to: KEAKLPWVVRGKCSY*RRDRNTSPLAKLLS Trigger: GCTGAGTAGCTTGGCTAGAGGACTAGTGTTCCTGTCCCTCCTCCAGTAACTGCACTTGCCCCTCACAACCCACGGCAGCTTGGCTTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR GCA 90 bp | GGAAAAGCTGTGCTGGCAGGAGGCAGCAGGGGTTGGCCAAAGCACTaGTGTGCATGTGACACGGGTTTCACAGTGGCAGATGCTTTAACA | + |
|
Preference number: 1 (lower is better) Translates to: GKAVLAGGSRGWPKH*CACDTGFTVADALT Trigger: TGTTAAAGCATCTGCCACTGTGAAACCCGTGTCACATGCACAGCAGTGCTTTGGCCAACCCCTGCTGCCTCCTGCCAGCACAGCTTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR CCA 90 bp | TGTGTCCTGTTGAGCGCTGCGGGTGCAGCACCAGGTCTGTGGCATTaGGTCACAGTCCAGCTGGACACCATGGATATACCTCAGATTTCT | + |
|
Preference number: 1 (lower is better) Translates to: CVLLSAAGAAPGLWH*VTVQLDTMDIPQIS Trigger: AGAAATCTGAGGTATATCCATGGTGTCCAGCTGGACTGTGACCCAATGCCACAGACCTGGTGCTGCACCCGCAGCGCTCAACAGGACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR CCA 90 bp | CTGCGGGTGCAGCACCAGGTCTGTGGCATTGGGTCACAGTCCAGCTaGACACCATGGATATACCTCAGATTTCTGGACTCAGTCTATAGG | + |
|
Preference number: 1 (lower is better) Translates to: LRVQHQVCGIGSQSS*TPWIYLRFLDSVYR Trigger: CCTATAGACTGAGTCCAGAAATCTGAGGTATATCCATGGTGTCCAGCTGGACTGTGACCCAATGCCACAGACCTGGTGCTGCACCCGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR CCA 90 bp | ACAGTAGGTAGCAGGATCGGTGCCTTCCTGCTTGAGGATCAAGTGTaGTTCAAAGTCAGCAGCAGGCCTGAATGGGCCATTGTCTGTTCC | + |
|
Preference number: 1 (lower is better) Translates to: TVGSRIGAFLLEDQV*FKVSSRPEWAIVCS Trigger: GGAACAGACAATGGCCCATTCAGGCCTGCTGCTGACTTTGAACCACACTTGATCCTCAAGCAGGAAGGCACCGATCCTGCTACCTACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR CCA 90 bp | CAGCACCAGGTCTGTGGCATTGGGTCACAGTCCAGCTGGACACCATaGATATACCTCAGATTTCTGGACTCAGTCTATAGGACTCTGTTT | + |
|
Preference number: 1 (lower is better) Translates to: QHQVCGIGSQSSWTP*IYLRFLDSVYRTLF Trigger: AAACAGAGTCCTATAGACTGAGTCCAGAAATCTGAGGTATATCCATGGTGTCCAGCTGGACTGTGACCCAATGCCACAGACCTGGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR TCA 90 bp | CTAAAACGTATTTACTATCCTTTGAGCTCCTGTCTGAGCTGTTACTaGTCCGATAGACCTAGGTGGTCGGTGTCAGGCTTGAGGACGAGC | + |
|
Preference number: 1 (lower is better) Translates to: LKRIYYPLSSCLSCY*SDRPRWSVSGLRTS Trigger: GCTCGTCCTCAAGCCTGACACCGACCACCTAGGTCTATCGGATCAGTAACAGCTCAGACAGGAGCTCAAAGGATAGTAAATACGTTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR GCA 90 bp | CTATCCTGTATCTTGACCAAAGATAAAATAGTGCTGATGGGGAACTaGCTGGGTGGAGGCACCAGAAGACAGAAGCCTGACAATTGTAGC | + |
|
Preference number: 1 (lower is better) Translates to: LSCILTKDKIVLMGN*LGGGTRRQKPDNCS Trigger: GCTACAATTGTCAGGCTTCTGTCTTCTGGTGCCTCCACCCAGGCAGTTCCCCATCAGCACTATTTTATCTTTGGTCAAGATACAGGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATCTCTGGGACATGAGACTGGAACCAAGCGGTGGCTGGCGTCTGCCAGGCTGGTTGTGAGGGGCAAGTaGAGTTACTGGAGGAGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: ASLGHETGTKRWLASARLVVRGK*SYWRRD Trigger: GTCCCTCCTCCAGTAACTGCACTTGCCCCTCACAAC...CAGCCTGGCAGACGCCAGCCACCGCTTGGTTCCAGTCTCATGTCCCAGAGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR-3UTR TCA 90 bp | GCATCTCTGGGACATGAGACTGGAACCAAGCGGTGGCTGGCGTCTGCCAGGCTGGTGGAGGATAGCTCTTaGGTGATGACAGTGGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: ASLGHETGTKRWLASARLVEDSS*VMTVAQ Trigger: CTGTGCCACTGTCATCACTCAAGAGCTATCCTCCAC...CAGCCTGGCAGACGCCAGCCACCGCTTGGTTCCAGTCTCATGTCCCAGAGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR CAA 90 bp | CTGTGTCCTGTTGAGCGCTGCGGGTGCAGCACCAGGTCTGTGGCATaGGGTCACAGTCCAGCTGGACACCATGGATATACCTCAGATTTC | + |
|
Preference number: 2 (lower is better) Translates to: LCPVERCGCSTRSVA*GHSPAGHHGYTSDF Trigger: GAAATCTGAGGTATATCCATGGTGTCCAGCTGGACTGTGACCCAATGCCACAGACCTGGTGCTGCACCCGCAGCGCTCAACAGGACACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGCAGCACCAGGTCTGTGGCATTGGGTCACAGTCCAGCTGGACACCATGGATAGAGCCCACAGTCAGTaGTTGTCCAGTGACAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GAAPGLWHWVTVQLDTMDRAHSQ*LSSDRE Trigger: TTCCCTGTCACTGGACAACCACTGACTGTGGGCTCT...ATCCATGGTGTCCAGCTGGACTGTGACCCAATGCCACAGACCTGGTGCTGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR-3UTR GCA 90 bp | CGATATTGCTTAGGAAAGTCAAGAGCCCACAGTCAGTGGTTGTCCAGTGACAGGGTGCTGATGGGGAACTaGCTGGGTGGAGGCACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: RYCLGKSRAHSQWLSSDRVLMGN*LGGGTR Trigger: TCTGGTGCCTCCACCCAGGCAGTTCCCCATCAGCAC...CCTGTCACTGGACAACCACTGACTGTGGGCTCTTGACTTTCCTAAGCAATATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCTGCCAGGCTGGTGACCAGTTTCTAGGGAAGGATAACAGGCCTGGGGAGGTGACAGGAATGGTTTCATaGGTAGGCAGAAGGAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: VCQAGDQFLGKDNRPGEVTGMVS*VGRRKA Trigger: AGCCTTCCTTCTGCCTACCCATGAAACCATTCCTGT...CACCTCCCCAGGCCTGTTATCCTTCCCTAGAAACTGGTCACCAGCCTGGCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR-3UTR CCA 90 bp | CGATATTGCTTAGGAAAGTCAAGAGCCCACAGTCAGTGGTTGTCCAGTGACAGGGGGGAACTGCCTGGGTaGAGGCACCAGAAGACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: RYCLGKSRAHSQWLSSDRGELPG*RHQKTE Trigger: TTCTGTCTTCTGGTGCCTCCACCCAGGCAGTTCCCC...CCTGTCACTGGACAACCACTGACTGTGGGCTCTTGACTTTCCTAAGCAATATCG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR-3UTR TCA 90 bp | TATTGCTTAGGAAAGTCAAGAGCCCACAGTCAGTGGTTGTCCAGTGACAGGGAATTTAACAAGGTGCAGTaGGAGCAGACTCAGAATCAA | + |
|
Preference number: 2 (lower is better) Translates to: YCLGKSRAHSQWLSSDREFNKVQ*EQTQNQ Trigger: TTGATTCTGAGTCTGCTCTCACTGCACCTTGTTAAA...TTCCCTGTCACTGGACAACCACTGACTGTGGGCTCTTGACTTTCCTAAGCAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR CCA 72 bp | AGTCAGTGGTTGTCCAGTGACAGGGAAAAGCTGTGCTaGCAGGAGGCAGCAGGGGTTGGCCAAAGCACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SQWLSSDREKLC*QEAAGVGQSTA Trigger: AGCAGTGCTTTGGCCAACCCCTGCTGCCTCCTGCCAGCACAGCTTTTCCCTGTCACTGGACAACCACTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR CCA 72 bp | TTGAGCGCTGCGGGTGCAGCACCAGGTCTGTGGCATTaGGTCACAGTCCAGCTGGACACCATGGATATACCT | + |
|
Preference number: 3 (lower is better) Translates to: LSAAGAAPGLWH*VTVQLDTMDIP Trigger: AGGTATATCCATGGTGTCCAGCTGGACTGTGACCCAATGCCACAGACCTGGTGCTGCACCCGCAGCGCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR GCA 72 bp | AAGGAAGCCAAGCTGCCGTGGGTTGTGAGGGGCAAGTaGAGTTACTGGAGGAGGGACAGGAACACTAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KEAKLPWVVRGK*SYWRRDRNTSP Trigger: AGGACTAGTGTTCCTGTCCCTCCTCCAGTAACTGCACTTGCCCCTCACAACCCACGGCAGCTTGGCTTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR CCA 72 bp | AAGCTGCCGTGGGTTGTGAGGGGCAAGTGCAGTTACTaGAGGAGGGACAGGAACACTAGTCCTCTAGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KLPWVVRGKCSY*RRDRNTSPLAK Trigger: CTTGGCTAGAGGACTAGTGTTCCTGTCCCTCCTCCAGTAACTGCACTTGCCCCTCACAACCCACGGCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR TCA 72 bp | ACTGATCCGATAGACCTAGGTGGTCGGTGTCAGGCTTaGGGACGAGCATCTCTGGGACATGAGACTGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: TDPIDLGGRCQA*GRASLGHETGT Trigger: GGTTCCAGTCTCATGTCCCAGAGATGCTCGTCCTCAAGCCTGACACCGACCACCTAGGTCTATCGGATCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR TCA 72 bp | AAAAACTTTCCAAGGAAGCCAAGCTGCCGTGGGTTGTaGGGGGCAAGTGCAGTTACTGGAGGAGGGACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KNFPRKPSCRGL*GASAVTGGGTG Trigger: TCCTGTCCCTCCTCCAGTAACTGCACTTGCCCCTCACAACCCACGGCAGCTTGGCTTCCTTGGAAAGTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR CCA 72 bp | AGCAGGATCGGTGCCTTCCTGCTTGAGGATCAAGTGTaGTTCAAAGTCAGCAGCAGGCCTGAATGGGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: SRIGAFLLEDQV*FKVSSRPEWAI Trigger: AATGGCCCATTCAGGCCTGCTGCTGACTTTGAACCACACTTGATCCTCAAGCAGGAAGGCACCGATCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCAGCACCAGGTCTGTGGCATTGGGTCACAGTCCAGCTGGACACCATGGATTTCTCCATCACGATATaGCTTAGGAAAGTCAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GAAPGLWHWVTVQLDTMDFSITI*LRKVKS Trigger: GCTCTTGACTTTCCTAAGCAATATCGTGATGGAGAA...ATCCATGGTGTCCAGCTGGACTGTGACCCAATGCCACAGACCTGGTGCTGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR GCA 72 bp | GACACGGGTTTCACAGTGGCAGATGCTTTAACAAGGTaGAGTGAGAGCAGACTCAGAATCAAGGTGTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: DTGFTVADALTR*SESRLRIKVSA Trigger: GGCAGACACCTTGATTCTGAGTCTGCTCTCACTGCACCTTGTTAAAGCATCTGCCACTGTGAAACCCGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR-3UTR CAA 90 bp | CGATATTGCTTAGGAAAGTCAAGAGCCCACAGTCAGTGGTTGTCCAGTGACAGGCCCCACACTGTTCACTaGCTTCAGGAAAACCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: RYCLGKSRAHSQWLSSDRPHTVH*LQENPQ Trigger: TTGAGGGTTTTCCTGAAGCAAGTGAACAGTGTGGGG...CCTGTCACTGGACAACCACTGACTGTGGGCTCTTGACTTTCCTAAGCAATATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR TCA 72 bp | GGGTTTCACAGTGGCAGATGCTTTAACAAGGTGCAGTaGGAGCAGACTCAGAATCAAGGTGTCTGCCCTATC | + |
|
Preference number: 3 (lower is better) Translates to: GFHSGRCFNKVQ*EQTQNQGVCPI Trigger: GATAGGGCAGACACCTTGATTCTGAGTCTGCTCTCACTGCACCTTGTTAAAGCATCTGCCACTGTGAAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR TCA 72 bp | CTTCCATTCATAACCTACTGGACATACACCACATTCTaGGGTCTGACACAGCTGTGTCCTGTTGAGCGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LPFITYWTYTTF*GLTQLCPVERC Trigger: GCAGCGCTCAACAGGACACAGCTGTGTCAGACCTCAGAATGTGGTGTATGTCCAGTAGGTTATGAATGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR GCA 72 bp | ATCTTGACCAAAGATAAAATAGTGCTGATGGGGAACTaGCTGGGTGGAGGCACCAGAAGACAGAAGCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: ILTKDKIVLMGN*LGGGTRRQKPD Trigger: GTCAGGCTTCTGTCTTCTGGTGCCTCCACCCAGGCAGTTCCCCATCAGCACTATTTTATCTTTGGTCAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR CCA 72 bp | GTCTGTGGCATTGGGTCACAGTCCAGCTGGACACCATaGATATACCTCAGATTTCTGGACTCAGTCTATAGG | + |
|
Preference number: 3 (lower is better) Translates to: VCGIGSQSSWTP*IYLRFLDSVYR Trigger: CCTATAGACTGAGTCCAGAAATCTGAGGTATATCCATGGTGTCCAGCTGGACTGTGACCCAATGCCACAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGGACTCAGTCTATAGGACTCTGTTTAGCCCGTGTTTGGTTTAAGGGTTGGGCCCTATCCTGTATCTaGACCAAAGATAAAATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FWTQSIGLCLARVWFKGWALSCI*TKDKIV Trigger: CACTATTTTATCTTTGGTCAAGATACAGGATAGGGC...CCAACCCTTAAACCAAACACGGGCTAAACAGAGTCCTATAGACTGAGTCCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CCA 90 bp | GCATCTCTGGGACATGAGACTGGAACCAAGCGGTGGCTGGCGTCTGCCAGGCTGAACCTGGTGGAGCCCTaGGGATGCTGGGCCGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASLGHETGTKRWLASARLNLVEP*GCWAEA Trigger: AGCCTCGGCCCAGCATCCCCAGGGCTCCACCAGGTT...CAGCCTGGCAGACGCCAGCCACCGCTTGGTTCCAGTCTCATGTCCCAGAGATGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR TCA 90 bp | CTGCGGGTGCAGCACCAGGTCTGTGGCATTGGGTCACAGTCCAGCTGGACACCACCACCCTCAGGTCACTaGTCCGTAGGCCTTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRVQHQVCGIGSQSSWTPPPSGH*SVGLLH Trigger: ATGGAGAAGGCCTACGGATCAGTGACCTGAGGGTGG...TGGTGTCCAGCTGGACTGTGACCCAATGCCACAGACCTGGTGCTGCACCCGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTTCACTTGCTTCAGGAAAACCCTCAACAGGGAGCGTCTCGAGGTCAAGGCGAGCCCTGGGGATGCTaGGCCGAGGCTGGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVHLLQENPQQGASRGQGEPWGC*AEAGAA Trigger: TGCTGCCCCAGCCTCGGCCCAGCATCCCCAGGGCTC...GCCTTGACCTCGAGACGCTCCCTGTTGAGGGTTTTCCTGAAGCAAGTGAACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR GCA 90 bp | CTGCGGGTGCAGCACCAGGTCTGTGGCATTGGGTCACAGTCCAGCTGGACACCACACGACCTTTCCATCTaGTCCCAGCTCAACGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRVQHQVCGIGSQSSWTPHDLSI*SQLNAF Trigger: GAAGGCGTTGAGCTGGGAGCAGATGGAAAGGTCGTG...TGGTGTCCAGCTGGACTGTGACCCAATGCCACAGACCTGGTGCTGCACCCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR GCA 90 bp | CTGCGGGTGCAGCACCAGGTCTGTGGCATTGGGTCACAGTCCAGCTGGACACCAGGGATTGTATTCCACTaGATCTCCCCCGTCGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRVQHQVCGIGSQSSWTPGIVFH*ISPVAS Trigger: GGAAGCGACGGGGGAGATGCAGTGGAATACAATCCC...TGGTGTCCAGCTGGACTGTGACCCAATGCCACAGACCTGGTGCTGCACCCGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR CAA 72 bp | GTTGAGCGCTGCGGGTGCAGCACCAGGTCTGTGGCATaGGGTCACAGTCCAGCTGGACACCATGGATATACC | + |
|
Preference number: 4 (lower is better) Translates to: VERCGCSTRSVA*GHSPAGHHGYT Trigger: GGTATATCCATGGTGTCCAGCTGGACTGTGACCCAATGCCACAGACCTGGTGCTGCACCCGCAGCGCTCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR TCA 90 bp | CTGCGGGTGCAGCACCAGGTCTGTGGCATTGGGTCACAGTCCAGCTGGACACCATGCGGTTCTGTTTGTTaGGCTTGCCCTGCAGTACGA | + |
|
Preference number: 4 (lower is better) Translates to: LRVQHQVCGIGSQSSWTPCGSVC*ACPAVR Trigger: TCGTACTGCAGGGCAAGCTCAACAAACAGAACCGCA...TGGTGTCCAGCTGGACTGTGACCCAATGCCACAGACCTGGTGCTGCACCCGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR GCA 90 bp | CCCACACTGTTCACTTGCTTCAGGAAAACCCTCAACAGGGAGCGTCTCGAGGTCCCGGATGGGTGCCTCTaGTTCTGGCTGTCCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTLFTCFRKTLNRERLEVPDGCL*FWLSTL Trigger: GAGGGTGGACAGCCAGAAGCAGAGGCACCCATCCGG...GACCTCGAGACGCTCCCTGTTGAGGGTTTTCCTGAAGCAAGTGAACAGTGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTCTACAGGAATGGTTTCATGGGTAGGCAGAAGGAAGGCTGGCCCTCAGGATCCACACGGCCACTGTaGGTCGTCCAGGAGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLYRNGFMGRQKEGWPSGSTRPL*VVQEVG Trigger: CCCAACCTCCTGGACGACCCACAGTGGCCGTGTGGA...TCCTGAGGGCCAGCCTTCCTTCTGCCTACCCATGAAACCATTCCTGTAGAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGAAGGAAGGCTGGCCCTCAGGATTCACAACATAAGCCAGGCTGGTCTCGCCCAGGGAGATGTTGTTaGGAAAGAAGAGGGCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRRKAGPQDSQHKPGWSRPGRCC*ERRGRP Trigger: AGGCCGCCCTCTTCTTTCTCAACAACATCTCCCTGG...GCGAGACCAGCCTGGCTTATGTTGTGAATCCTGAGGGCCAGCCTTCCTTCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CCA 90 bp | GACACGGGTTTCACAGTGGCAGATGCTTTAACAAGGTGCAGTGAGAGCAGACTCATGCTGGGCCGAGGCTaGGGCAGCAAGCCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTGFTVADALTRCSESRLMLGRG*GSKPWL Trigger: CAGCCATGGCTTGCTGCCCCAGCCTCGGCCCAGCAT...GAGTCTGCTCTCACTGCACCTTGTTAAAGCATCTGCCACTGTGAAACCCGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR GCA 90 bp | CGATATTGCTTAGGAAAGTCAAGAGCCCACAGTCAGTGGTTGTCCAGTGACAGGACGCCGCCGGATGGGTaGCTCTGCTTCTGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RYCLGKSRAHSQWLSSDRTPPDG*LCFWLS Trigger: GGACAGCCAGAAGCAGAGGCACCCATCCGGCGGCGT...CCTGTCACTGGACAACCACTGACTGTGGGCTCTTGACTTTCCTAAGCAATATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTTCACTTGCTTCAGGAAAACCCTCAACAGGGAGCGTCTCGAGGTCAAGGCAGAAACGCCGCCGGATaGGTGCCTCTGCTTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVHLLQENPQQGASRGQGRNAAG*VPLLLA Trigger: AGCCAGAAGCAGAGGCACCCATCCGGCGGCGTTTCT...GCCTTGACCTCGAGACGCTCCCTGTTGAGGGTTTTCCTGAAGCAAGTGAACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGCCAGGCTGGTGACCAGTTTCTAGGGAAGGATAACAGGCCTGGGGAGGTGGGTCGTCCAGGAGGTTaGGATTGTATTCCACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VCQAGDQFLGKDNRPGEVGRPGG*DCIPLH Trigger: ATGCAGTGGAATACAATCCCAACCTCCTGGACGACC...CACCTCCCCAGGCCTGTTATCCTTCCCTAGAAACTGGTCACCAGCCTGGCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR CAA 72 bp | CCACACGAAGAACAAACCAAGCCCCACACTGTTCACTaGCTTCAGGAAAACCCTCAACAGGGAGCGTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PHEEQTKPHTVH*LQENPQQGASR Trigger: TCGAGACGCTCCCTGTTGAGGGTTTTCCTGAAGCAAGTGAACAGTGTGGGGCTTGGTTTGTTCTTCGTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR TCA 90 bp | GGAACTGCCTGGGTGGAGGCACCAGAAGACAGAAGCCTGACAATTGTAGCAAGTACCGCTTGGCACAGATaGGTACAATCCTGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTAWVEAPEDRSLTIVASTAWHR*VQSCCS Trigger: AGAACAGCAGGATTGTACTCATCTGTGCCAAGCGGT...ACTTGCTACAATTGTCAGGCTTCTGTCTTCTGGTGCCTCCACCCAGGCAGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR GCA 90 bp | CTGCGGGTGCAGCACCAGGTCTGTGGCATTGGGTCACAGTCCAGCTGGACACCATTCTTTGTGTCATACTaGCTCATGTTCTTGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRVQHQVCGIGSQSSWTPFFVSY*LMFLMK Trigger: CTTCATCAAGAACATGAGGCAGTATGACACAAAGAA...TGGTGTCCAGCTGGACTGTGACCCAATGCCACAGACCTGGTGCTGCACCCGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR TCA 90 bp | TTCTGGACTCAGTCTATAGGACTCTGTTTAGCCCGTGTTTGGTTTAAGGGTTGGCACAGGTTTGTGTCTTaGACCTGGTGGAGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FWTQSIGLCLARVWFKGWHRFVS*TWWSPG Trigger: CCCAGGGCTCCACCAGGTTCAAGACACAAACCTGTG...CCAACCCTTAAACCAAACACGGGCTAAACAGAGTCCTATAGACTGAGTCCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR GCA 90 bp | GGAACTGCCTGGGTGGAGGCACCAGAAGACAGAAGCCTGACAATTGTAGCAAGTTTGTTGAGCTTGCCCTaGAGTACGAGCTTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GTAWVEAPEDRSLTIVASLLSLP*STSFSK Trigger: CTTTGAGAAGCTCGTACTGCAGGGCAAGCTCAACAA...ACTTGCTACAATTGTCAGGCTTCTGTCTTCTGGTGCCTCCACCCAGGCAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR TCA 90 bp | TTCTGGACTCAGTCTATAGGACTCTGTTTAGCCCGTGTTTGGTTTAAGGGTTGGTGCGGAGGTCACTGCTaGTCTTGGCAGCCAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FWTQSIGLCLARVWFKGWCGGHC*SWQPTE Trigger: TTCTGTTGGCTGCCAAGATCAGCAGTGACCTCCGCA...CCAACCCTTAAACCAAACACGGGCTAAACAGAGTCCTATAGACTGAGTCCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR GCA 90 bp | GGAACTGCCTGGGTGGAGGCACCAGAAGACAGAAGCCTGACAATTGTAGCAAGTAGGGTACAGGAACTTTaGATAAGACACGACCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTAWVEAPEDRSLTIVASRVQEL*IRHDLS Trigger: GGAAAGGTCGTGTCTTATGCAAAGTTCCTGTACCCT...ACTTGCTACAATTGTCAGGCTTCTGTCTTCTGGTGCCTCCACCCAGGCAGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR GCA 90 bp | CGATATTGCTTAGGAAAGTCAAGAGCCCACAGTCAGTGGTTGTCCAGTGACAGGTCACAGGCTCCAAGCTaGACTCTTCAGAAAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RYCLGKSRAHSQWLSSDRSQAPS*TLQKGS Trigger: GGAACCTTTCTGAAGAGTGCAGCTTGGAGCCTGTGA...CCTGTCACTGGACAACCACTGACTGTGGGCTCTTGACTTTCCTAAGCAATATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CCA 90 bp | GCCACACGAAGAACAAACCAAGCCCCACACTGTTCACTTGCTTCAGGAAAACCCTGGGGCAGCAAGCCATaGCTGTCATTCTTGTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: ATRRTNQAPHCSLASGKPWGSKP*LSFLCI Trigger: TATACACAAGAATGACAGCCATGGCTTGCTGCCCCA...GGGTTTTCCTGAAGCAAGTGAACAGTGTGGGGCTTGGTTTGTTCTTCGTGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR TCA 90 bp | GGTCTCTACAGGAATGGTTTCATGGGTAGGCAGAAGGAAGGCTGGCCCTCAGGAAATGTCAGTTTGATATaGGGGAACTTTTCCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLYRNGFMGRQKEGWPSGNVSLI*GNFSLK Trigger: CTTCAGGGAAAAGTTCCCTCATATCAAACTGACATT...TCCTGAGGGCCAGCCTTCCTTCTGCCTACCCATGAAACCATTCCTGTAGAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR GCA 90 bp | GCCACACGAAGAACAAACCAAGCCCCACACTGTTCACTTGCTTCAGGAAAACCCATCCTTCTTGAGGTCTaGAGGTTTCACATACTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: ATRRTNQAPHCSLASGKPILLEV*RFHILY Trigger: ATAGAGTATGTGAAACCTGCAGACCTCAAGAAGGAT...GGGTTTTCCTGAAGCAAGTGAACAGTGTGGGGCTTGGTTTGTTCTTCGTGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR TCA 90 bp | TTAAAAACTTTCCAAGGAAGCCAAGCTGCCGTGGGTTGTGAGGGGCAAGTGCAGTGTATGAAGCAAAGATaGGTACACGCTTATGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKTFQGSQAAVGCEGQVQCMKQR*VHAYVF Trigger: GAAAACATAAGCGTGTACTCATCTTTGCTTCATACA...CTGCACTTGCCCCTCACAACCCACGGCAGCTTGGCTTCCTTGGAAAGTTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR TCA 90 bp | TTCTGGACTCAGTCTATAGGACTCTGTTTAGCCCGTGTTTGGTTTAAGGGTTGGCATTCATATCCTTCTTaGGGTCTGCAGGTTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: FWTQSIGLCLARVWFKGWHSYPS*GLQVSH Trigger: ATGTGAAACCTGCAGACCTCAAGAAGGATATGAATG...CCAACCCTTAAACCAAACACGGGCTAAACAGAGTCCTATAGACTGAGTCCAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| 3UTR CAA 72 bp | AGACTCAGAATCAAGGTGTCTGCCCTATCCTGTATCTaGACCAAAGATAAAATAGTGCTGATGGGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLRIKVSALSCI*TKDKIVLMGNC Trigger: GCAGTTCCCCATCAGCACTATTTTATCTTTGGTCAAGATACAGGATAGGGCAGACACCTTGATTCTGAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGGACTCAGTCTATAGGACTCTGTTTAGCCCGTGTTTGGTTTAAGGGTTGGATGTTCTTGATGAAGTaGGTTTTCTTCAGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FWTQSIGLCLARVWFKGWMFLMK*VFFRPL Trigger: CAAAGGCCTGAAGAAAACCCACTTCATCAAGAACAT...CCAACCCTTAAACCAAACACGGGCTAAACAGAGTCCTATAGACTGAGTCCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS TCA 90 bp | GGCCGTCCGTCCAGGGAGATGTTGTTGAGAAAGAAGAGGGCGGCCTaGCGGCGCCGGGAGTCCCCGCGCCTCCGCGGCACGGCCGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRPSREMLLRKKRAA*RRRESPRLRGTAGG Trigger: CCCGCCGGCCGTGCCGCGGAGGCGCGGGGACTCCCGGCGCCGTCAGGCCGCCCTCTTCTTTCTCAACAACATCTCCCTGGACGGACGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS TCA 90 bp | CTCCGGGACCCAGGCTCGGGGGCCGTCCGTCCAGGGAGATGTTGTTaGGAAAGAAGAGGGCGGCCTGACGGCGCCGGGAGTCCCCGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRDPGSGAVRPGRCC*ERRGRPDGAGSPRA Trigger: GGCGCGGGGACTCCCGGCGCCGTCAGGCCGCCCTCTTCTTTCTCAACAACATCTCCCTGGACGGACGGCCCCCGAGCCTGGGTCCCGGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CAA 90 bp | GCATCTCTGGGACATGAGACTGGAACCAAGCGGTGGCTGGCGTCTGCCAGGCTGTTGCGGTTCTGTTTGTaGAGCTTGCCCTGCAGTACG | + |
|
Preference number: 5 (lower is better) Translates to: ASLGHETGTKRWLASARLLRFCL*SLPCST Trigger: CGTACTGCAGGGCAAGCTCAACAAACAGAACCGCAA...CAGCCTGGCAGACGCCAGCCACCGCTTGGTTCCAGTCTCATGTCCCAGAGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CCA 90 bp | TTGTGTCTTGAACCTGGTGGAGCCCTGGGGATGCTGGGCCGAGGCTaGGGCAGCAAGCCATGGCTGTCATTCTTGTGTATAACCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LCLEPGGALGMLGRG*GSKPWLSFLCITRA Trigger: TGCTCTGGTTATACACAAGAATGACAGCCATGGCTTGCTGCCCCAGCCTCGGCCCAGCATCCCCAGGGCTCCACCAGGTTCAAGACACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGCCAGGCTGGTGACCAGTTTCTAGGGAAGGATAACAGGCCTGGGGAGGTGTCCAGGGAGATGTTGTaGAGAAAGAAGAGGGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VCQAGDQFLGKDNRPGEVSREML*RKKRAA Trigger: GGCCGCCCTCTTCTTTCTCAACAACATCTCCCTGGA...CACCTCCCCAGGCCTGTTATCCTTCCCTAGAAACTGGTCACCAGCCTGGCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGCCAGGCTGGTGACCAGTTTCTAGGGAAGGATAACAGGCCTGGGGAGGTGGGGTCGTCCAGGAGGTaGGGATTGTATTCCACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VCQAGDQFLGKDNRPGEVGSSRR*GLYSTA Trigger: TGCAGTGGAATACAATCCCAACCTCCTGGACGACCC...CACCTCCCCAGGCCTGTTATCCTTCCCTAGAAACTGGTCACCAGCCTGGCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CAA 90 bp | GCATCTCTGGGACATGAGACTGGAACCAAGCGGTGGCTGGCGTCTGCCAGGCTGAGTTTGCGGTTCTGTTaGTTGAGCTTGCCCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASLGHETGTKRWLASARLSLRFC*LSLPCS Trigger: ACTGCAGGGCAAGCTCAACAAACAGAACCGCAAACT...CAGCCTGGCAGACGCCAGCCACCGCTTGGTTCCAGTCTCATGTCCCAGAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS GCA 90 bp | AAGACCATCTCAGAAGAAACAGAAACGCCGCCGGATGGGTGCCTCTaGTTCTGGCTGTCCACCCTCAGGTCACTGATCCGTAGGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KTISEETETPPDGCL*FWLSTLRSLIRRPS Trigger: AGAAGGCCTACGGATCAGTGACCTGAGGGTGGACAGCCAGAAGCAGAGGCACCCATCCGGCGGCGTTTCTGTTTCTTCTGAGATGGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CCA 90 bp | CACGCTTATGTTTTCCACACGGCCACTGTGGGTCGTCCAGGAGGTTaGGATTGTATTCCACTGCATCTCCCCCGTCGCTTCCTAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HAYVFHTATVGRPGG*DCIPLHLPRRFLVL Trigger: CAGAACTAGGAAGCGACGGGGGAGATGCAGTGGAATACAATCCCAACCTCCTGGACGACCCACAGTGGCCGTGTGGAAAACATAAGCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CAA 90 bp | CTGCGGGTGCAGCACCAGGTCTGTGGCATTGGGTCACAGTCCAGCTGGACACCACAATCCTGCTGTTCTTaGTGTCATACTGCCTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LRVQHQVCGIGSQSSWTPQSCCS*CHTASC Trigger: ACATGAGGCAGTATGACACAAAGAACAGCAGGATTG...TGGTGTCCAGCTGGACTGTGACCCAATGCCACAGACCTGGTGCTGCACCCGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAAACTTTCCAAGGAAGCCAAGCTGCCGTGGGTTGTGAGGGGCAAGTGCAGCCGTCCAGGGAGATGTaGTTGAGAAAGAAGAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LKTFQGSQAAVGCEGQVQPSREM*LRKKRA Trigger: CGCCCTCTTCTTTCTCAACAACATCTCCCTGGACGG...CTGCACTTGCCCCTCACAACCCACGGCAGCTTGGCTTCCTTGGAAAGTTTTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGAAGGAAGGCTGGCCCTCAGGATTCACAACATAAGCCAGGCTGGTCTCGCGTTTTCTTCAGGCCTTaGTGTCTTGGTGATCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GRRKAGPQDSQHKPGWSRVFFRP*CLGDPD Trigger: ATCTGGATCACCAAGACACAAAGGCCTGAAGAAAAC...GCGAGACCAGCCTGGCTTATGTTGTGAATCCTGAGGGCCAGCCTTCCTTCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTTCACTTGCTTCAGGAAAACCCTCAACAGGGAGCGTCTCGAGGTCAAGGCTGCTTCACTTCACTCTaGCGGAGGTCACTGCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: TVHLLQENPQQGASRGQGCFTSL*RRSLLI Trigger: GATCAGCAGTGACCTCCGCAAGAGTGAAGTGAAGCA...GCCTTGACCTCGAGACGCTCCCTGTTGAGGGTTTTCCTGAAGCAAGTGAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGCCAGGCTGGTGACCAGTTTCTAGGGAAGGATAACAGGCCTGGGGAGGTGTACTGCCTCATGTTCTaGATGAAGTGGGTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VCQAGDQFLGKDNRPGEVYCLMF*MKWVFF Trigger: GAAGAAAACCCACTTCATCAAGAACATGAGGCAGTA...CACCTCCCCAGGCCTGTTATCCTTCCCTAGAAACTGGTCACCAGCCTGGCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CAA 90 bp | GACACGGGTTTCACAGTGGCAGATGCTTTAACAAGGTGCAGTGAGAGCAGACTCTCCAGGAGGTTGGGATaGTATTCCACTGCATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: DTGFTVADALTRCSESRLSRRLG*YSTASP Trigger: GGGAGATGCAGTGGAATACAATCCCAACCTCCTGGA...GAGTCTGCTCTCACTGCACCTTGTTAAAGCATCTGCCACTGTGAAACCCGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAAACTTTCCAAGGAAGCCAAGCTGCCGTGGGTTGTGAGGGGCAAGTGCAGAGGTCACTGCTGATCTaGGCAGCCAACAGAACACAG | + |
|
Preference number: 5 (lower is better) Translates to: LKTFQGSQAAVGCEGQVQRSLLI*AANRTQ Trigger: CTGTGTTCTGTTGGCTGCCAAGATCAGCAGTGACCT...CTGCACTTGCCCCTCACAACCCACGGCAGCTTGGCTTCCTTGGAAAGTTTTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS GCA 90 bp | AAGTGGGTTTTCTTCAGGCCTTTGTGTCTTGGTGATCCAGATGCATaGTTGGTTCTCTGCACCGAGGCACATCCCACTGTGTCTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KWVFFRPLCLGDPDA*LVLCTEAHPTVSSR Trigger: TCTGGAAGACACAGTGGGATGTGCCTCGGTGCAGAGAACCAAGCATGCATCTGGATCACCAAGACACAAAGGCCTGAAGAAAACCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS GCA 90 bp | TCTTTCCTGTTGAACCGGAACCTTTCCTCCAGCTTGTCAATAAGCTaGTTCACTTCACTCTTGCGGAGGTCACTGCTGATCTTGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFLLNRNLSSSLSIS*FTSLLRRSLLILAA Trigger: GGCTGCCAAGATCAGCAGTGACCTCCGCAAGAGTGAAGTGAAGCAGCTTATTGACAAGCTGGAGGAAAGGTTCCGGTTCAACAGGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CCA 90 bp | GGGTTTTCTTCAGGCCTTTGTGTCTTGGTGATCCAGATGCATGCTTaGTTCTCTGCACCGAGGCACATCCCACTGTGTCTTCCAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: GFSSGLCVLVIQMHA*FSAPRHIPLCLPET Trigger: AGTTTCTGGAAGACACAGTGGGATGTGCCTCGGTGCAGAGAACCAAGCATGCATCTGGATCACCAAGACACAAAGGCCTGAAGAAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CAA 90 bp | TATTGCTTAGGAAAGTCAAGAGCCCACAGTCAGTGGTTGTCCAGTGACAGGGAATCAGGCCTTTGTGTCTaGGTGATCCAGATGCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: YCLGKSRAHSQWLSSDRESGLCV*VIQMHA Trigger: AGCATGCATCTGGATCACCAAGACACAAAGGCCTGA...TTCCCTGTCACTGGACAACCACTGACTGTGGGCTCTTGACTTTCCTAAGCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS-3UTR CAA 90 bp | AGAATCAAGGTGTCTGCCCTATCCTGTATCTTGACCAAAGATAAAATAGTGCTGGCACACAGGGACCGCTaGGCACAGATGAGTACAATC | + |
|
Preference number: 5 (lower is better) Translates to: RIKVSALSCILTKDKIVLAHRDR*AQMSTI Trigger: GATTGTACTCATCTGTGCCAAGCGGTCCCTGTGTGC...CAGCACTATTTTATCTTTGGTCAAGATACAGGATAGGGCAGACACCTTGATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS TCA 90 bp | CTTGAGGTCTGCAGGTTTCACATACTCTATAACGGTGGTCATGTATaGAGCAAAGATGAGTACACGCTTATGTTTTCCACACGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LEVCRFHILYNGGHV*SKDEYTLMFSTRPL Trigger: CAGTGGCCGTGTGGAAAACATAAGCGTGTACTCATCTTTGCTTCATACATGACCACCGTTATAGAGTATGTGAAACCTGCAGACCTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CCA 90 bp | ATCCTGCTGTTCTTTGTGTCATACTGCCTCATGTTCTTGATGAAGTaGGTTTTCTTCAGGCCTTTGTGTCTTGGTGATCCAGATGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: ILLFFVSYCLMFLMK*VFFRPLCLGDPDAC Trigger: GCATGCATCTGGATCACCAAGACACAAAGGCCTGAAGAAAACCCACTTCATCAAGAACATGAGGCAGTATGACACAAAGAACAGCAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS TCA 72 bp | TCCAGGGAGATGTTGTTGAGAAAGAAGAGGGCGGCCTaGCGGCGCCGGGAGTCCCCGCGCCTCCGCGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: SREMLLRKKRAA*RRRESPRLRGT Trigger: CGTGCCGCGGAGGCGCGGGGACTCCCGGCGCCGTCAGGCCGCCCTCTTCTTTCTCAACAACATCTCCCTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS TCA 72 bp | CCAGGCTCGGGGGCCGTCCGTCCAGGGAGATGTTGTTaGGAAAGAAGAGGGCGGCCTGACGGCGCCGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PGSGAVRPGRCC*ERRGRPDGAGS Trigger: ACTCCCGGCGCCGTCAGGCCGCCCTCTTCTTTCTCAACAACATCTCCCTGGACGGACGGCCCCCGAGCCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CAA 90 bp | TTCCAGAAACTCAAGGGAACAGCGCTGAGATGTGACTCGTCTCCTTaGGCGCTGCCCGTCCAGGCCAAGGCCGGCGGGCGCCGTCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FQKLKGTALRCDSSP*ALPVQAKAGGRRRG Trigger: CCCACGACGGCGCCCGCCGGCCTTGGCCTGGACGGGCAGCGCCAAAGGAGACGAGTCACATCTCAGCGCTGTTCCCTTGAGTTTCTGGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CCA 72 bp | GTTTGTGTCTTGAACCTGGTGGAGCCCTGGGGATGCTaGGCCGAGGCTGGGGCAGCAAGCCATGGCTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VCVLNLVEPWGC*AEAGAASHGCH Trigger: ATGACAGCCATGGCTTGCTGCCCCAGCCTCGGCCCAGCATCCCCAGGGCTCCACCAGGTTCAAGACACAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CAA 90 bp | GCATCTCCCCCGTCGCTTCCTAGTTCTGTGCCAGCTGGTGTTGACTaGGTAGGCACAGGTTTGTGTCTTGAACCTGGTGGAGCCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ASPPSLPSSVPAGVD*VGTGLCLEPGGALG Trigger: CCCCAGGGCTCCACCAGGTTCAAGACACAAACCTGTGCCTACCAAGTCAACACCAGCTGGCACAGAACTAGGAAGCGACGGGGGAGATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS TCA 72 bp | CCCACTGTGTCTTCCAGAAACTCAAGGGAACAGCGCTaGGATGTGACTCGTCTCCTTTGGCGCTGCCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PTVSSRNSREQR*DVTRLLWRCPS Trigger: GGACGGGCAGCGCCAAAGGAGACGAGTCACATCTCAGCGCTGTTCCCTTGAGTTTCTGGAAGACACAGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS GCA 72 bp | TCAGAAGAAACAGAAACGCCGCCGGATGGGTGCCTCTaGTTCTGGCTGTCCACCCTCAGGTCACTGATCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SEETETPPDGCL*FWLSTLRSLIR Trigger: ACGGATCAGTGACCTGAGGGTGGACAGCCAGAAGCAGAGGCACCCATCCGGCGGCGTTTCTGTTTCTTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS GCA 72 bp | ACCATCTCAGAAGAAACAGAAACGCCGCCGGATGGGTaGCTCTGCTTCTGGCTGTCCACCCTCAGGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: TISEETETPPDG*LCFWLSTLRSL Trigger: CAGTGACCTGAGGGTGGACAGCCAGAAGCAGAGGCACCCATCCGGCGGCGTTTCTGTTTCTTCTGAGATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CCA 72 bp | GTTTTCCACACGGCCACTGTGGGTCGTCCAGGAGGTTaGGATTGTATTCCACTGCATCTCCCCCGTCGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VFHTATVGRPGG*DCIPLHLPRRF Trigger: GAAGCGACGGGGGAGATGCAGTGGAATACAATCCCAACCTCCTGGACGACCCACAGTGGCCGTGTGGAAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS TCA 72 bp | TGTCTTCCAGAAACTCAAGGGAACAGCGCTGAGATGTaGCTCGTCTCCTTTGGCGCTGCCCGTCCAGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: CLPETQGNSAEM*LVSFGAARPGQ Trigger: TTGGCCTGGACGGGCAGCGCCAAAGGAGACGAGTCACATCTCAGCGCTGTTCCCTTGAGTTTCTGGAAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CCA 72 bp | AAAGACCATCTCAGAAGAAACAGAAACGCCGCCGGATaGGTGCCTCTGCTTCTGGCTGTCCACCCTCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: KDHLRRNRNAAG*VPLLLAVHPQV Trigger: GACCTGAGGGTGGACAGCCAGAAGCAGAGGCACCCATCCGGCGGCGTTTCTGTTTCTTCTGAGATGGTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CAA 72 bp | TCTGTGCCAGCTGGTGTTGACTTGGTAGGCACAGGTTaGTGTCTTGAACCTGGTGGAGCCCTGGGGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVPAGVDLVGTG*CLEPGGALGML Trigger: CAGCATCCCCAGGGCTCCACCAGGTTCAAGACACAAACCTGTGCCTACCAAGTCAACACCAGCTGGCACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CAA 72 bp | TGTTTTCCACACGGCCACTGTGGGTCGTCCAGGAGGTaGGGATTGTATTCCACTGCATCTCCCCCGTCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CFPHGHCGSSRR*GLYSTASPPSL Trigger: AAGCGACGGGGGAGATGCAGTGGAATACAATCCCAACCTCCTGGACGACCCACAGTGGCCGTGTGGAAAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CCA 72 bp | CTGGGGATGCTGGGCCGAGGCTGGGGCAGCAAGCCATaGCTGTCATTCTTGTGTATAACCAGAGCATTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: LGMLGRGWGSKP*LSFLCITRALV Trigger: TACTAATGCTCTGGTTATACACAAGAATGACAGCCATGGCTTGCTGCCCCAGCCTCGGCCCAGCATCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CAA 90 bp | TTATGTTTTCCACACGGCCACTGTGGGTCGTCCAGGAGGTTGGGATaGTATTCCACTGCATCTCCCCCGTCGCTTCCTAGTTCTGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LCFPHGHCGSSRRLG*YSTASPPSLPSSVP Trigger: TGGCACAGAACTAGGAAGCGACGGGGGAGATGCAGTGGAATACAATCCCAACCTCCTGGACGACCCACAGTGGCCGTGTGGAAAACATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS TCA 72 bp | CTGAGAAGGCCGCACACAGGGACCGCTTGGCACAGATaGGTACAATCCTGCTGTTCTTTGTGTCATACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRRPHTGTAWHR*VQSCCSLCHTA Trigger: GGCAGTATGACACAAAGAACAGCAGGATTGTACTCATCTGTGCCAAGCGGTCCCTGTGTGCGGCCTTCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS GCA 72 bp | CTTGCCCTGCAGTACGAGCTTCTCAAAGTACACATATaGCATGGACACGGTCACAGGCTCCAAGCTGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: LALQYELLKVHI*HGHGHRLQAAL Trigger: GAGTGCAGCTTGGAGCCTGTGACCGTGTCCATGGCATATGTGTACTTTGAGAAGCTCGTACTGCAGGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CAA 72 bp | CCGTCGCTTCCTAGTTCTGTGCCAGCTGGTGTTGACTaGGTAGGCACAGGTTTGTGTCTTGAACCTGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSLPSSVPAGVD*VGTGLCLEPGG Trigger: TCCACCAGGTTCAAGACACAAACCTGTGCCTACCAAGTCAACACCAGCTGGCACAGAACTAGGAAGCGACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS GCA 72 bp | TTCTTCAGGCCTTTGTGTCTTGGTGATCCAGATGCATaGTTGGTTCTCTGCACCGAGGCACATCCCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FFRPLCLGDPDA*LVLCTEAHPTV Trigger: CACAGTGGGATGTGCCTCGGTGCAGAGAACCAAGCATGCATCTGGATCACCAAGACACAAAGGCCTGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CCA 72 bp | GATGAGTACACGCTTATGTTTTCCACACGGCCACTGTaGGTCGTCCAGGAGGTTGGGATTGTATTCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: DEYTLMFSTRPL*VVQEVGIVFHC Trigger: GCAGTGGAATACAATCCCAACCTCCTGGACGACCCACAGTGGCCGTGTGGAAAACATAAGCGTGTACTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CCA 72 bp | CCTGCAGTACGAGCTTCTCAAAGTACACATATGCCATaGACACGGTCACAGGCTCCAAGCTGCACTCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PAVRASQSTHMP*TRSQAPSCTLQ Trigger: CTGAAGAGTGCAGCTTGGAGCCTGTGACCGTGTCCATGGCATATGTGTACTTTGAGAAGCTCGTACTGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CAA 72 bp | TTCAGGCCTTTGTGTCTTGGTGATCCAGATGCATGCTaGGTTCTCTGCACCGAGGCACATCCCACTGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FRPLCLGDPDAC*VLCTEAHPTVS Trigger: AGACACAGTGGGATGTGCCTCGGTGCAGAGAACCAAGCATGCATCTGGATCACCAAGACACAAAGGCCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CAA 90 bp | CGGAACCTTTCCTCCAGCTTGTCAATAAGCTGCTTCACTTCACTCTaGCGGAGGTCACTGCTGATCTTGGCAGCCAACAGAACACAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RNLSSSLSISCFTSL*RRSLLILAANRTQA Trigger: AGCCTGTGTTCTGTTGGCTGCCAAGATCAGCAGTGACCTCCGCAAGAGTGAAGTGAAGCAGCTTATTGACAAGCTGGAGGAAAGGTTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CAA 90 bp | TGGGTTTTCTTCAGGCCTTTGTGTCTTGGTGATCCAGATGCATGCTaGGTTCTCTGCACCGAGGCACATCCCACTGTGTCTTCCAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: WVFFRPLCLGDPDAC*VLCTEAHPTVSSRN Trigger: GTTTCTGGAAGACACAGTGGGATGTGCCTCGGTGCAGAGAACCAAGCATGCATCTGGATCACCAAGACACAAAGGCCTGAAGAAAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS GCA 72 bp | TTGTGTCTTGGTGATCCAGATGCATGCTTGGTTCTCTaGACCGAGGCACATCCCACTGTGTCTTCCAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LCLGDPDACLVL*TEAHPTVSSRN Trigger: GTTTCTGGAAGACACAGTGGGATGTGCCTCGGTGCAGAGAACCAAGCATGCATCTGGATCACCAAGACACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS GCA 72 bp | ACACATATGCCATGGACACGGTCACAGGCTCCAAGCTaGACTCTTCAGAAAGGTTCCGCATCTCCCGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: THMPWTRSQAPS*TLQKGSASPVL Trigger: TAAAACGGGAGATGCGGAACCTTTCTGAAGAGTGCAGCTTGGAGCCTGTGACCGTGTCCATGGCATATGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CAA 72 bp | TCCTCCAGCTTGTCAATAAGCTGCTTCACTTCACTCTaGCGGAGGTCACTGCTGATCTTGGCAGCCAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSSLSISCFTSL*RRSLLILAANR Trigger: TCTGTTGGCTGCCAAGATCAGCAGTGACCTCCGCAAGAGTGAAGTGAAGCAGCTTATTGACAAGCTGGAGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CAA 90 bp | AAGCCAATGAGGTCTTTCCTGTTGAACCGGAACCTTTCCTCCAGCTaGTCAATAAGCTGCTTCACTTCACTCTTGCGGAGGTCACTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KPMRSFLLNRNLSSS*SISCFTSLLRRSLL Trigger: CAGCAGTGACCTCCGCAAGAGTGAAGTGAAGCAGCTTATTGACAAGCTGGAGGAAAGGTTCCGGTTCAACAGGAAAGACCTCATTGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS GCA 72 bp | TTGAACCGGAACCTTTCCTCCAGCTTGTCAATAAGCTaGTTCACTTCACTCTTGCGGAGGTCACTGCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: LNRNLSSSLSIS*FTSLLRRSLLI Trigger: GATCAGCAGTGACCTCCGCAAGAGTGAAGTGAAGCAGCTTATTGACAAGCTGGAGGAAAGGTTCCGGTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CAA 90 bp | AAAGCCACGAGCACCGTGAACTCAAAGCCAATGAGGTCTTTCCTGTaGAACCGGAACCTTTCCTCCAGCTTGTCAATAAGCTGCTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: KATSTVNSKPMRSFL*NRNLSSSLSISCFT Trigger: AGTGAAGCAGCTTATTGACAAGCTGGAGGAAAGGTTCCGGTTCAACAGGAAAGACCTCATTGGCTTTGAGTTCACGGTGCTCGTGGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CAA 72 bp | AGCACCGTGAACTCAAAGCCAATGAGGTCTTTCCTGTaGAACCGGAACCTTTCCTCCAGCTTGTCAATAAGC | + |
|
Preference number: 6 (lower is better) Translates to: STVNSKPMRSFL*NRNLSSSLSIS Trigger: GCTTATTGACAAGCTGGAGGAAAGGTTCCGGTTCAACAGGAAAGACCTCATTGGCTTTGAGTTCACGGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CAA 90 bp | TCATACTGCCTCATGTTCTTGATGAAGTGGGTTTTCTTCAGGCCTTaGTGTCTTGGTGATCCAGATGCATGCTTGGTTCTCTGCACCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SYCLMFLMKWVFFRP*CLGDPDACLVLCTE Trigger: CTCGGTGCAGAGAACCAAGCATGCATCTGGATCACCAAGACACAAAGGCCTGAAGAAAACCCACTTCATCAAGAACATGAGGCAGTATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS GCA 72 bp | GTGTATAACCAGAGCATTAGTAGGGTACAGGAACTTTaGATAAGACACGACCTTTCCATCTGCTCCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VYNQSISRVQEL*IRHDLSICSQL Trigger: GAGCTGGGAGCAGATGGAAAGGTCGTGTCTTATGCAAAGTTCCTGTACCCTACTAATGCTCTGGTTATACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CAA 72 bp | CTCATGTTCTTGATGAAGTGGGTTTTCTTCAGGCCTTaGTGTCTTGGTGATCCAGATGCATGCTTGGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LMFLMKWVFFRP*CLGDPDACLVL Trigger: GAGAACCAAGCATGCATCTGGATCACCAAGACACAAAGGCCTGAAGAAAACCCACTTCATCAAGAACATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||
| CDS CCA 72 bp | TTCTTTGTGTCATACTGCCTCATGTTCTTGATGAAGTaGGTTTTCTTCAGGCCTTTGTGTCTTGGTGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: FFVSYCLMFLMK*VFFRPLCLGDP Trigger: TGGATCACCAAGACACAAAGGCCTGAAGAAAACCCACTTCATCAAGAACATGAGGCAGTATGACACAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108891.2 |
||