Pregenerated sensors for CABLES1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040957Ensembl transcript IDs: ENSMUST00000046948.10, ENSMUST00000171109.9
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTCCAGGAACTCGGGGCTTCTCAGCGAAAGCAGAGCTGCGAGTTaGCTGGCCTCTCCTCTCCCCTCTCTGGGAGTAAGCGAGGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: VSRNSGLLSESRAAS*LASPLPSLGVSEAP Trigger: TGGAGCCTCGCTTACTCCCAGAGAGGGGAGAGGAGAGGCCAGTCAACTCGCAGCTCTGCTTTCGCTGAGAAGCCCCGAGTTCCTGGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR CCA 90 bp | CCTGAGAGGAAGAGCTGGGCACAGCTTAGCTCTGGCTGTGGGAGCTaGGAGGCCTTCATCATCCCCAGCACACGCCTTCTCAGCAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: PERKSWAQLSSGCGS*EAFIIPSTRLLSKP Trigger: AGGCTTGCTGAGAAGGCGTGTGCTGGGGATGATGAAGGCCTCCCAGCTCCCACAGCCAGAGCTAAGCTGTGCCCAGCTCTTCCTCTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR GCA 90 bp | GCCTCAAGTCTCCAGGAACTCGGGGCTTCTCAGCGAAAGCAGAGCTaGGAGTTGACTGGCCTCTCCTCTCCCCTCTCTGGGAGTAAGCGA | + |
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Preference number: 1 (lower is better) Translates to: ASSLQELGASQRKQS*ELTGLSSPLSGSKR Trigger: TCGCTTACTCCCAGAGAGGGGAGAGGAGAGGCCAGTCAACTCGCAGCTCTGCTTTCGCTGAGAAGCCCCGAGTTCCTGGAGACTTGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR CCA 90 bp | GTGCCCCAGGGAAGTGCACTTCCGATGGCAGATATAAAAATAGGTTaGCACACTCTCGACACAGGGCGAGGGACCGCGAAGCAGCATCCC | + |
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Preference number: 1 (lower is better) Translates to: VPQGSALPMADIKIG*HTLDTGRGTAKQHP Trigger: GGGATGCTGCTTCGCGGTCCCTCGCCCTGTGTCGAGAGTGTGCCAACCTATTTTTATATCTGCCATCGGAAGTGCACTTCCCTGGGGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR TCA 90 bp | AGGACAAGTCACAATTTTGTACTAACAATCAGTTCAACCACAGCTTaGAATGTAGTTTGTCCCAGCTGCAAAAGCCACAAGACACCAATC | + |
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Preference number: 1 (lower is better) Translates to: RTSHNFVLTISSTTA*NVVCPSCKSHKTPI Trigger: GATTGGTGTCTTGTGGCTTTTGCAGCTGGGACAAACTACATTTCAAGCTGTGGTTGAACTGATTGTTAGTACAAAATTGTGACTTGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR TCA 90 bp | CAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATGGCAGCAGAGCTGCGAGTTaGCTGGCCTCTCCTCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: QTLAHPHPCAPGKCTSDGSRAAS*LASPLP Trigger: GGGGAGAGGAGAGGCCAGTCAACTCGCAGCTCTGCT...GCCATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR CCA 90 bp | AACAGTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCGAGCTGCGAGTTGACTaGCCTCTCCTCTCCCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: NSVPQTLAHPHPCAPGKCELRVD*PLLSPL Trigger: GAGAGGGGAGAGGAGAGGCCAGTCAACTCGCAGCTC...GCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACACTGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR GCA 90 bp | CAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATGGCCAGCGAAAGCAGAGCTaGGAGTTGACTGGCCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: QTLAHPHPCAPGKCTSDGQRKQS*ELTGLS Trigger: GGAGAGGCCAGTCAACTCGCAGCTCTGCTTTCGCTG...GCCATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR CAA 90 bp | AGTCTCCAGGAACTCGGGGCTTCTCAGCGAAAGCAGAGCTGCGAGTaGACTGGCCTCTCCTCTCCCCTCTCTGGGAGTAAGCGAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: SLQELGASQRKQSCE*TGLSSPLSGSKRGS Trigger: GGAGCCTCGCTTACTCCCAGAGAGGGGAGAGGAGAGGCCAGTCAACTCGCAGCTCTGCTTTCGCTGAGAAGCCCCGAGTTCCTGGAGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR GCA 90 bp | AACAGTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCCTCAAGTTTCTCATGTaGCTGAGAGGAAGAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: NSVPQTLAHPHPCAPGKCLKFLM*LRGRAG Trigger: CCCAGCTCTTCCTCTCAGGCACATGAGAAACTTGAG...GCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACACTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR GCA 90 bp | GGGGTCGAGTGTAACAGTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCTCAAGTTTCTCATGTaGCTGAGAGGAAGAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GVECNSVPQTLAHPHPCALKFLM*LRGRAG Trigger: CCCAGCTCTTCCTCTCAGGCACATGAGAAACTTGAG...GGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACACTGTTACACTCGACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR CCA 90 bp | CACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCAGCGAAAGAGCTGCGAGTTGACTaGCCTCTCCTCTCCCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: HAFSASLKSPGTRGFSAKELRVD*PLLSPL Trigger: GAGAGGGGAGAGGAGAGGCCAGTCAACTCGCAGCTC...TTTCGCTGAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAGAAGGCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR CCA 90 bp | AACAGTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCAATTCAGAACAGGCCTaGAATGAAGGTGACGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: NSVPQTLAHPHPCAPGKCNSEQA*NEGDEA Trigger: CGCCTCGTCACCTTCATTCCAGGCCTGTTCTGAATT...GCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACACTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR TCA 90 bp | CCGATGGCAGATATAAAAATAGGTTGGCACACTCTCGACACAGGGCGAGGGACCAGCAGAGCTGCGAGTTaGCTGGCCTCTCCTCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: PMADIKIGWHTLDTGRGTSRAAS*LASPLP Trigger: GGGGAGAGGAGAGGCCAGTCAACTCGCAGCTCTGCT...GGTCCCTCGCCCTGTGTCGAGAGTGTGCCAACCTATTTTTATATCTGCCATCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR CAA 90 bp | TGTGCCCCAGGGAAGTGCACTTCCGATGGCAGATATAAAAATAGGTaGGCACACTCTCGACACAGGGCGAGGGACCGCGAAGCAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: CAPGKCTSDGRYKNR*AHSRHRARDREAAS Trigger: GGATGCTGCTTCGCGGTCCCTCGCCCTGTGTCGAGAGTGTGCCAACCTATTTTTATATCTGCCATCGGAAGTGCACTTCCCTGGGGCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR GCA 90 bp | AACAGTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCTGTCCCAGCACATCATaGTACAAATTCAGAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: NSVPQTLAHPHPCAPGKCCPSTS*YKFRTG Trigger: GCCTGTTCTGAATTTGTAGCATGATGTGCTGGGACA...GCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACACTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR GCA 90 bp | GTGAGTCGCTGTTACCTAGAAGGCATTACAAGTCAGCTCCATAGAAGGTGGGCGACACCCGCACCCCTGTaGCCCAGGGAAGTGCACTTC | + |
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Preference number: 2 (lower is better) Translates to: VSRCYLEGITSQLHRRWATPAPL*PREVHF Trigger: GAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGT...CGCCCACCTTCTATGGAGCTGACTTGTAATGCCTTCTAGGTAACAGCGACTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGCAAGAGCTAGAGGGTTAAACAGGAGCCCATGGTGTGACAGCAGGAGCTCGTGTGCCCCAGGGAAGTaGACTTCCGATGGCAGATAT | + |
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Preference number: 2 (lower is better) Translates to: QARARGLNRSPWCDSRSSCAPGK*TSDGRY Trigger: ATATCTGCCATCGGAAGTGCACTTCCCTGGGGCACA...CGAGCTCCTGCTGTCACACCATGGGCTCCTGTTTAACCCTCTAGCTCTTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR CCA 90 bp | AACAGTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCGATATAAAAATAGGTTaGCACACTCTCGACACAGGG | + |
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Preference number: 2 (lower is better) Translates to: NSVPQTLAHPHPCAPGKCDIKIG*HTLDTG Trigger: CCCTGTGTCGAGAGTGTGCCAACCTATTTTTATATC...GCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACACTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR GCA 90 bp | TCTAACATAGAGCACAGGAATACACGCTATGGAGTGCAGCCCTCATGTCTCCACTGTCCCAGCACATCATaGTACAAATTCAGAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: SNIEHRNTRYGVQPSCLHCPSTS*YKFRTG Trigger: GCCTGTTCTGAATTTGTAGCATGATGTGCTGGGACA...GTGGAGACATGAGGGCTGCACTCCATAGCGTGTATTCCTGTGCTCTATGTTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR CAA 90 bp | CAATTTTGTACTAACAATCAGTTCAACCACAGCTTGAAATGTAGTTaGTCCCAGCTGCAAAAGCCACAAGACACCAATCATGCGTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: QFCTNNQFNHSLKCS*SQLQKPQDTNHASY Trigger: GTAAGACGCATGATTGGTGTCTTGTGGCTTTTGCAGCTGGGACAAACTACATTTCAAGCTGTGGTTGAACTGATTGTTAGTACAAAATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR CAA 90 bp | CAGGACAAGTCACAATTTTGTACTAACAATCAGTTCAACCACAGCTaGAAATGTAGTTTGTCCCAGCTGCAAAAGCCACAAGACACCAAT | + |
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Preference number: 2 (lower is better) Translates to: QDKSQFCTNNQFNHS*KCSLSQLQKPQDTN Trigger: ATTGGTGTCTTGTGGCTTTTGCAGCTGGGACAAACTACATTTCAAGCTGTGGTTGAACTGATTGTTAGTACAAAATTGTGACTTGTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR CAA 90 bp | CACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATGGCAGATAAGCAGAGCTGCGAGTaGACTGGCCTCTCCTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: HLHTRTPVPQGSALPMADKQSCE*TGLSSP Trigger: GGGAGAGGAGAGGCCAGTCAACTCGCAGCTCTGCTT...ATCTGCCATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR GCA 72 bp | CCTCTCCCCTCTCTGGGAGTAAGCGAGGCTCCACTGTaGTCAGGAAGCAGTCTTGGCCCTCCTGAGGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: PLPSLGVSEAPL*SGSSLGPPEAS Trigger: ACTGGCCTCAGGAGGGCCAAGACTGCTTCCTGAGCACAGTGGAGCCTCGCTTACTCCCAGAGAGGGGAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR GCA 72 bp | CTCCAGGAACTCGGGGCTTCTCAGCGAAAGCAGAGCTaGGAGTTGACTGGCCTCTCCTCTCCCCTCTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: LQELGASQRKQS*ELTGLSSPLSG Trigger: CCCAGAGAGGGGAGAGGAGAGGCCAGTCAACTCGCAGCTCTGCTTTCGCTGAGAAGCCCCGAGTTCCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR CAA 90 bp | CCAGCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCAGCTCAGGAAGCAGTCTaGGCCCTCCTGAGGCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: PAHAFSASLKSPGTRGFSAQEAV*ALLRPV Trigger: CACTGGCCTCAGGAGGGCCAAGACTGCTTCCTGAGC...TGAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR CCA 72 bp | CGGCCTCAAGTTTCTCATGTGCCTGAGAGGAAGAGCTaGGCACAGCTTAGCTCTGGCTGTGGGAGCTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: RPQVSHVPERKS*AQLSSGCGSWE Trigger: CTCCCAGCTCCCACAGCCAGAGCTAAGCTGTGCCCAGCTCTTCCTCTCAGGCACATGAGAAACTTGAGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR CCA 72 bp | CCACAGGCAAGAGCTAGAGGGTTAAACAGGAGCCCATaGTGTGACAGCAGGAGCTCGGAGCGCACCACTCTG | + |
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Preference number: 3 (lower is better) Translates to: PQARARGLNRSP*CDSRSSERTTL Trigger: CAGAGTGGTGCGCTCCGAGCTCCTGCTGTCACACCATGGGCTCCTGTTTAACCCTCTAGCTCTTGCCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR-3UTR CAA 90 bp | TGTTACCTAGAAGGCATTACAAGTCAGCTCCATAGAAGGTGGGCGTTGGCTTTGGCTCAGGAAGCAGTCTaGGCCCTCCTGAGGCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: CYLEGITSQLHRRWALALAQEAV*ALLRPV Trigger: CACTGGCCTCAGGAGGGCCAAGACTGCTTCCTGAGC...CAAAGCCAACGCCCACCTTCTATGGAGCTGACTTGTAATGCCTTCTAGGTAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR CCA 72 bp | TACCTAGAAGGCATTACAAGTCAGCTCCATAGAAGGTaGGCGTTGGCTTTGGGGTCGAGTGTAACAGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: YLEGITSQLHRR*ALALGSSVTVS Trigger: GGACACTGTTACACTCGACCCCAAAGCCAACGCCCACCTTCTATGGAGCTGACTTGTAATGCCTTCTAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR TCA 90 bp | GTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCAGCGGCCAGCAGGCTaGGCCGAGCCCTTGCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: VSRRHLHTRTPVPQGSALQRPAG*AEPLLR Trigger: CCGGAGCAAGGGCTCGGCTCAGCCTGCTGGCCGCTG...AAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | AACAGTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCGACTGCTGCTGCTGCTaGTGCAGGCGGCCGTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: NSVPQTLAHPHPCAPGKCDCCCC*CRRPCP Trigger: CGGGCACGGCCGCCTGCAGCAGCAGCAGCAGCAGTC...GCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACACTGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | AACAGTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCCGCGACTGCTGCTGCTaGTGCTGCAGGCGGCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: NSVPQTLAHPHPCAPGKCRDCCC*CCRRPC Trigger: GCACGGCCGCCTGCAGCAGCAGCAGCAGCAGTCGCG...GCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACACTGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | CCCCTCTCTGGGAGTAAGCGAGGCTCCACTGTGCTCAGGAAGCAGTCTTGGCCCCGCCGCGACTGCTGCTaGTGCTGCTGCAGGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PLSGSKRGSTVLRKQSWPRRDCC*CCCRRP Trigger: CGGCCGCCTGCAGCAGCAGCAGCAGCAGTCGCGGCG...GGGCCAAGACTGCTTCCTGAGCACAGTGGAGCCTCGCTTACTCCCAGAGAGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | GTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCAAGGCTCCCCTGGGTaGTGCCAGCCCGGCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: VSRRHLHTRTPVPQGSALQGSPG*CQPGPW Trigger: CCATGGGCCGGGCTGGCAGCACCCAGGGGAGCCTTG...AAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | CCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATCCAAGGCGCTGGTGCTaGCGCCCTGGCCTGACTGCT | + |
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Preference number: 4 (lower is better) Translates to: PQTLAHPHPCAPGKCTSDPRRWC*RPGLTA Trigger: AGCAGTCAGGCCAGGGCGGCAGCACCAGCGCCTTGG...ATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR CCA 90 bp | GTAAGCGAGGCTCCACTGTGCTCAGGAAGCAGTCTTGGCCCTCCTGAGGCCAGTCCGCCGCCCCACTCGTaGTCCTGCAGCGGAGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: VSEAPLCSGSSLGPPEASPPPHS*SCSGGR Trigger: ACGGCCTCCGCTGCAGGACCACGAGTGGGGCGGCGG...ACTGGCCTCAGGAGGGCCAAGACTGCTTCCTGAGCACAGTGGAGCCTCGCTTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR CCA 90 bp | CGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATGCTGGTGCTGCCGCCCTaGCCTGACTGCTCCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: RRHLHTRTPVPQGSALPMLVLPP*PDCSKA Trigger: CGCCTTGGAGCAGTCAGGCCAGGGCGGCAGCACCAG...CATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR TCA 90 bp | GAGGCCTTCATCATCCCCAGCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGCAGCGGCCAGCAGGCTaGGCCGAGCCCTTGCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: EAFIIPSTRLLSKPQVSRQRPAG*AEPLLR Trigger: CCGGAGCAAGGGCTCGGCTCAGCCTGCTGGCCGCTG...CCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGCTGGGGATGATGAAGGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | CGAAGCAGCATCCCGGAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACAGCTCCAAGGCGCTGGTaGTGCCGCCCTGGCCTGACT | + |
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Preference number: 4 (lower is better) Translates to: RSSIPESHALGSLLCPSTAPRRW*CRPGLT Trigger: AGTCAGGCCAGGGCGGCAGCACCAGCGCCTTGGAGC...TGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTCCGGGATGCTGCTTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | CCCTCTCTGGGAGTAAGCGAGGCTCCACTGTGCTCAGGAAGCAGTCTTGGCCCTCAAGGCTCCCCTGGGTaGTGCCAGCCCGGCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: PSLGVSEAPLCSGSSLGPQGSPG*CQPGPW Trigger: CCATGGGCCGGGCTGGCAGCACCCAGGGGAGCCTTG...AGGGCCAAGACTGCTTCCTGAGCACAGTGGAGCCTCGCTTACTCCCAGAGAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR CCA 90 bp | GAGAGGAAGAGCTGGGCACAGCTTAGCTCTGGCTGTGGGAGCTGGGAGGCCTTCCTGGTGCTGCCGCCCTaGCCTGACTGCTCCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: ERKSWAQLSSGCGSWEAFLVLPP*PDCSKA Trigger: CGCCTTGGAGCAGTCAGGCCAGGGCGGCAGCACCAG...GAAGGCCTCCCAGCTCCCACAGCCAGAGCTAAGCTGTGCCCAGCTCTTCCTCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | CCCCTCTCTGGGAGTAAGCGAGGCTCCACTGTGCTCAGGAAGCAGTCTTGGCCCGGCGCCGCGGGTCCATaGGCGGCTTACGAAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: PLSGSKRGSTVLRKQSWPGAAGP*AAYEEV Trigger: AACCTCTTCGTAAGCCGCGCATGGACCCGCGGCGCC...GGGCCAAGACTGCTTCCTGAGCACAGTGGAGCCTCGCTTACTCCCAGAGAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | GCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCAGCGCCAAGGCGCTGGTGCTaGCGCCCTGGCCTGACTGCT | + |
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Preference number: 4 (lower is better) Translates to: AHAFSASLKSPGTRGFSAPRRWC*RPGLTA Trigger: AGCAGTCAGGCCAGGGCGGCAGCACCAGCGCCTTGG...CGCTGAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | CCGGAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACATCATGCTACAAACCGCCGCCCCACTCGTaGTCCTGCAGCGGAGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PESHALGSLLCPSTSCYKPPPHS*SCSGGR Trigger: ACGGCCTCCGCTGCAGGACCACGAGTGGGGCGGCGG...TTTGTAGCATGATGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | CAGGCAAGAGCTAGAGGGTTAAACAGGAGCCCATGGTGTGACAGCAGGAGCTCGGACTGCTGCTGCTGCTaGTGCAGGCGGCCGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QARARGLNRSPWCDSRSSDCCCC*CRRPCP Trigger: CGGGCACGGCCGCCTGCAGCAGCAGCAGCAGCAGTC...CGAGCTCCTGCTGTCACACCATGGGCTCCTGTTTAACCCTCTAGCTCTTGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | CTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCAGCGAAAGCAGAGCTGGCTCCCCTGGGTGCTaGCAGCCCGGCCCATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSKPQVSRNSGLLSESRAGSPGC*QPGPWR Trigger: TCTCCATGGGCCGGGCTGGCAGCACCCAGGGGAGCC...AGCTCTGCTTTCGCTGAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR CCA 90 bp | GGGGTCGAGTGTAACAGTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCTCAGGCTCCGAAACTaGGAGAAGGAGGCGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVECNSVPQTLAHPHPCALRLRN*EKEAVE Trigger: CTCCACCGCCTCCTTCTCCCAGTTTCGGAGCCTGAG...GGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACACTGTTACACTCGACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR CCA 90 bp | CAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATGGCAGGCCATGGCCACCGTaGGCTCCTCAAAGCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTLAHPHPCAPGKCTSDGRPWPP*APQSHS Trigger: ACTGTGGCTTTGAGGAGCCCACGGTGGCCATGGCCT...GCCATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR TCA 90 bp | CGAAGCAGCATCCCGGAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACAGCACCTGCACGTTGGTaGAGGCATCGTCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSSIPESHALGSLLCPSTAPARW*RHRPPP Trigger: TGGAGGAGGACGATGCCTTCACCAACGTGCAGGTGC...TGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTCCGGGATGCTGCTTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR TCA 90 bp | CCCCTCTCTGGGAGTAAGCGAGGCTCCACTGTGCTCAGGAAGCAGTCTTGGCCCGCACCTGCACGTTGGTaGAGGCATCGTCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSGSKRGSTVLRKQSWPAPARW*RHRPPP Trigger: TGGAGGAGGACGATGCCTTCACCAACGTGCAGGTGC...GGGCCAAGACTGCTTCCTGAGCACAGTGGAGCCTCGCTTACTCCCAGAGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR TCA 90 bp | CACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATGGCAGATATAAAAGCTGCCGCCCTGGCCTaGCTGCTCCAAGGCGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HTRTPVPQGSALPMADIKAAALA*LLQGAV Trigger: TACTGCGCCTTGGAGCAGTCAGGCCAGGGCGGCAGC...TTTTATATCTGCCATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR GCA 90 bp | CCGGAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACATCATGCTACAAAGCTCCAAGGCGCTGGTaGTGCCGCCCTGGCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PESHALGSLLCPSTSCYKAPRRW*CRPGLT Trigger: AGTCAGGCCAGGGCGGCAGCACCAGCGCCTTGGAGC...TTTGTAGCATGATGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR GCA 90 bp | CAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATGGCATGGCCCCTGCTGACTaGCTCCCTCCATCCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTLAHPHPCAPGKCTSDGMAPAD*LPPSNF Trigger: GAAGTTGGATGGAGGGAGGCAGTCAGCAGGGGCCAT...GCCATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR GCA 90 bp | AACAGTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCGTCAGAACTCGCTTGTaGTTGCCGCAAGGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSVPQTLAHPHPCAPGKCVRTRL*LPQGHW Trigger: CCAGTGGCCTTGCGGCAAGCACAAGCGAGTTCTGAC...GCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACACTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | CCTCAAGTTTCTCATGTGCCTGAGAGGAAGAGCTGGGCACAGCTTAGCTCTGGCAAGGACAGGGCAGCCTaGCGGCGCCGCGGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PQVSHVPERKSWAQLSSGKDRAA*RRRGSM Trigger: CATGGACCCGCGGCGCCGCCAGGCTGCCCTGTCCTT...GCCAGAGCTAAGCTGTGCCCAGCTCTTCCTCTCAGGCACATGAGAAACTTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | CAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATGGCTCTGCGAGTTCTGCCTaGAGAAGGCGATGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTLAHPHPCAPGKCTSDGSASSA*RRRWAG Trigger: TCCTGCCCATCGCCTTCTCCAGGCAGAACTCGCAGA...GCCATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | CCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATTCTGCGAGTTCTGCCTaGAGAAGGCGATGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQTLAHPHPCAPGKCTSDSASSA*RRRWAG Trigger: TCCTGCCCATCGCCTTCTCCAGGCAGAACTCGCAGA...ATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR CCA 90 bp | CCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATATGGAGAGGCTTCGGTaGCTCAGGCTCCGAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQTLAHPHPCAPGKCTSDMERLR*LRLRNW Trigger: CCAGTTTCGGAGCCTGAGCCACCGAAGCCTCTCCAT...ATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR TCA 90 bp | GTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCAGAGAAATGTTGGTaGGGAAGGACAGGGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSRRHLHTRTPVPQGSALPEKCW*GRTGQP Trigger: AGGCTGCCCTGTCCTTCCTCACCAACATTTCTCTGG...AAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR TCA 90 bp | CCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATCCAGAGAAATGTTGGTaGGGAAGGACAGGGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQTLAHPHPCAPGKCTSDPEKCW*GRTGQP Trigger: AGGCTGCCCTGTCCTTCCTCACCAACATTTCTCTGG...ATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR TCA 90 bp | CCGGAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACATCATGCTACAAAGCTGAACGGGGCGGCTaGGATGGCTCTCCCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: PESHALGSLLCPSTSCYKAERGG*DGSPNT Trigger: GGTGTTGGGAGAGCCATCTCAGCCGCCCCGTTCAGC...TTTGTAGCATGATGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | GCAGATATAAAAATAGGTTGGCACACTCTCGACACAGGGCGAGGGACCGCGAAGCGCGACTGCTGCTGCTaGTGCTGCAGGCGGCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ADIKIGWHTLDTGRGTAKRDCCC*CCRRPC Trigger: GCACGGCCGCCTGCAGCAGCAGCAGCAGCAGTCGCG...CTTCGCGGTCCCTCGCCCTGTGTCGAGAGTGTGCCAACCTATTTTTATATCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | TCCTCTCCCCTCTCTGGGAGTAAGCGAGGCTCCACTGTGCTCAGGAAGCAGTCTCTGGACCTCTGCAGCTaGTCCAAGGCGCTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPLSGSKRGSTVLRKQSLDLCS*SKALVL Trigger: CAGCACCAGCGCCTTGGAGCAGCTGCAGAGGTCCAG...AGACTGCTTCCTGAGCACAGTGGAGCCTCGCTTACTCCCAGAGAGGGGAGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | CCGATGGCAGATATAAAAATAGGTTGGCACACTCTCGACACAGGGCGAGGGACCGGCTCCCCTGGGTGCTaGCAGCCCGGCCCATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PMADIKIGWHTLDTGRGTGSPGC*QPGPWR Trigger: TCTCCATGGGCCGGGCTGGCAGCACCCAGGGGAGCC...GGTCCCTCGCCCTGTGTCGAGAGTGTGCCAACCTATTTTTATATCTGCCATCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR CCA 90 bp | CAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATGGCAAGCCACAGTCCTCCTaGGCAAGCTTCCGCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTLAHPHPCAPGKCTSDGKPQSS*ASFRIS Trigger: AGAGATGCGGAAGCTTGCCCAGGAGGACTGTGGCTT...GCCATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR TCA 90 bp | CACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATGGCAGATCAGGGTCTCCAAAGATaGTCTCTGGGAGATGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HLHTRTPVPQGSALPMADQGLQR*SLGDEA Trigger: CGCCTCATCTCCCAGAGATCATCTTTGGAGACCCTG...ATCTGCCATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR TCA 90 bp | GAGAGGAAGAGCTGGGCACAGCTTAGCTCTGGCTGTGGGAGCTGGGAGGCCTTCCAGGGTCTCCAAAGATaGTCTCTGGGAGATGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ERKSWAQLSSGCGSWEAFQGLQR*SLGDEA Trigger: CGCCTCATCTCCCAGAGATCATCTTTGGAGACCCTG...GAAGGCCTCCCAGCTCCCACAGCCAGAGCTAAGCTGTGCCCAGCTCTTCCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | CCCCTCTCTGGGAGTAAGCGAGGCTCCACTGTGCTCAGGAAGCAGTCTTGGCCCCAGAGCTTCCGGTTCTaGTTGTTCAGCTTCCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLSGSKRGSTVLRKQSWPQSFRF*LFSFPL Trigger: CAGGGGGAAGCTGAACAAGCAGAACCGGAAGCTCTG...GGGCCAAGACTGCTTCCTGAGCACAGTGGAGCCTCGCTTACTCCCAGAGAGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | AACAGTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCAGGTGCTTGACCTCGTaGTTTCTGAGGTCACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NSVPQTLAHPHPCAPGKCRCLTS*FLRSLP Trigger: CGGAAGTGACCTCAGAAAGCACGAGGTCAAGCACCT...GCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACACTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | CAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATGGCAGGTGCTTGACCTCGTaGTTTCTGAGGTCACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QTLAHPHPCAPGKCTSDGRCLTS*FLRSLP Trigger: CGGAAGTGACCTCAGAAAGCACGAGGTCAAGCACCT...GCCATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR CCA 90 bp | TCCTCTCCCCTCTCTGGGAGTAAGCGAGGCTCCACTGTGCTCAGGAAGCAGTCTTCTCCTTCAGGCTCATaGCCCCTGCTGACTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSPLSGSKRGSTVLRKQSSPSGS*PLLTAS Trigger: GGAGGCAGTCAGCAGGGGCCATGAGCCTGAAGGAGA...AGACTGCTTCCTGAGCACAGTGGAGCCTCGCTTACTCCCAGAGAGGGGAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR CCA 90 bp | AGTGTAACAGTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAAGCCACAGTCCTCCTaGGCAAGCTTCCGCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVTVSRRHLHTRTPVPQGKPQSS*ASFRIS Trigger: AGAGATGCGGAAGCTTGCCCAGGAGGACTGTGGCTT...TCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACACTGTTACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR TCA 90 bp | AAGAGCTGGGCACAGCTTAGCTCTGGCTGTGGGAGCTGGGAGGCCTTCATCATCATGGGCAGGATTCCCTaGGTGAACGAGTTGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KSWAQLSSGCGSWEAFIIMGRIP*VNELRR Trigger: CCGCCTCAACTCGTTCACTCAGGGAATCCTGCCCAT...GATGATGAAGGCCTCCCAGCTCCCACAGCCAGAGCTAAGCTGTGCCCAGCTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR TCA 90 bp | GAGAGGAAGAGCTGGGCACAGCTTAGCTCTGGCTGTGGGAGCTGGGAGGCCTTCCACCTTCAAGGCCAATaGTCTCCTTCAGGCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ERKSWAQLSSGCGSWEAFHLQGQ*SPSGSW Trigger: CCATGAGCCTGAAGGAGATCATTGGCCTTGAAGGTG...GAAGGCCTCCCAGCTCCCACAGCCAGAGCTAAGCTGTGCCCAGCTCTTCCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR TCA 90 bp | GCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCAGCGTGTTCAGCTTCCCCCTaGGGGCCAGCTTCTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AHAFSASLKSPGTRGFSACSASP*GPASQS Trigger: ACTTTGAGAAGCTGGCCCTCAGGGGGAAGCTGAACA...CGCTGAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR TCA 90 bp | CCCAGCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCGTCTATAGTGGGGCATaGCTTCGTGCTCTGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSTRLLSKPQVSRNSGLLVYSGA*LRALAG Trigger: ACCTGCCAGAGCACGAAGTCATGCCCCACTATAGAC...GAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | CCAGCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCATCCCAGGTCACTTCCTaGATCAAGGCTCCCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAHAFSASLKSPGTRGFSSQVTS*IKAPLG Trigger: ACCCAGGGGAGCCTTGATGCAGGAAGTGACCTGGGA...TGAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | GCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCAGCGCAGAGCTTCCGGTTCTaGTTGTTCAGCTTCCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AHAFSASLKSPGTRGFSAQSFRF*LFSFPL Trigger: CAGGGGGAAGCTGAACAAGCAGAACCGGAAGCTCTG...CGCTGAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | GACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATGGCAGGGGAGAAGGAGGCGGTaGAGTCTATGGTATTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: DTCTPAPLCPREVHFRWQGRRRR*SLWYFY Trigger: GTAGAAATACCATAGACTCCACCGCCTCCTTCTCCC...CTGCCATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | CCGGAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACATCATGCTACAAACTCAGGCTCCGAAACTaGGAGAAGGAGGCGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PESHALGSLLCPSTSCYKLRLRN*EKEAVE Trigger: CTCCACCGCCTCCTTCTCCCAGTTTCGGAGCCTGAG...TTTGTAGCATGATGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGCTGGGAGGCCTTCATCATCCCCAGCACACGCCTTCTCAGCAAGCCTCAAAGTAGACAAAGGCCATaGCCACCGTGGGCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSWEAFIIPSTRLLSKPQSRQRP*PPWAPQ Trigger: TTGAGGAGCCCACGGTGGCCATGGCCTTTGTCTACT...TTGAGGCTTGCTGAGAAGGCGTGTGCTGGGGATGATGAAGGCCTCCCAGCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR TCA 90 bp | CCGGAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACATCATGCTACAAAATGGGCAGGATTCCCTaGGTGAACGAGTTGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PESHALGSLLCPSTSCYKMGRIP*VNELRR Trigger: CCGCCTCAACTCGTTCACTCAGGGAATCCTGCCCAT...TTTGTAGCATGATGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR TCA 90 bp | TCTAACATAGAGCACAGGAATACACGCTATGGAGTGCAGCCCTCATGTCTCCACGCTGCCGCCCTGGCCTaGCTGCTCCAAGGCGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SNIEHRNTRYGVQPSCLHAAALA*LLQGAV Trigger: TACTGCGCCTTGGAGCAGTCAGGCCAGGGCGGCAGC...GTGGAGACATGAGGGCTGCACTCCATAGCGTGTATTCCTGTGCTCTATGTTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCAAGAGCTAGAGGGTTAAACAGGAGCCCATGGTGTGACAGCAGGAGCTCGTCGTGCTCTGGCAGGTaGAGTGCAAACTCCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QARARGLNRSPWCDSRSSSCSGR*SANSKA Trigger: GGCCTTGGAGTTTGCACTTCACCTGCCAGAGCACGA...CGAGCTCCTGCTGTCACACCATGGGCTCCTGTTTAACCCTCTAGCTCTTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR GCA 90 bp | GAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACATCATGCTACAAATTCCTGGACCTCTGCAGCTaGTCCAAGGCGCTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESHALGSLLCPSTSCYKFLDLCS*SKALVL Trigger: CAGCACCAGCGCCTTGGAGCAGCTGCAGAGGTCCAG...GAATTTGTAGCATGATGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR GCA 90 bp | CCGGAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACATCATGCTACAAAATGGCCCCTGCTGACTaGCTCCCTCCATCCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PESHALGSLLCPSTSCYKMAPAD*LPPSNF Trigger: GAAGTTGGATGGAGGGAGGCAGTCAGCAGGGGCCAT...TTTGTAGCATGATGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | GAGGCCTTCATCATCCCCAGCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAGTAGACAAAGGCCATaGCCACCGTGGGCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EAFIIPSTRLLSKPQVSRSRQRP*PPWAPQ Trigger: TTGAGGAGCCCACGGTGGCCATGGCCTTTGTCTACT...CCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGCTGGGGATGATGAAGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR TCA 90 bp | CCGGAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACATCATGCTACAAAATGATCTCTGGGAGATaGGGCGACGTCTGGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PESHALGSLLCPSTSCYKMISGR*GDVWTS Trigger: AGAGGTCCAGACGTCGCCTCATCTCCCAGAGATCAT...TTTGTAGCATGATGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR GCA 90 bp | CCGATGGCAGATATAAAAATAGGTTGGCACACTCTCGACACAGGGCGAGGGACCGAACTCGCTTGTGCTTaGCGCAAGGCCACTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PMADIKIGWHTLDTGRGTELACA*RKATGG Trigger: ACCCCCAGTGGCCTTGCGGCAAGCACAAGCGAGTTC...GGTCCCTCGCCCTGTGTCGAGAGTGTGCCAACCTATTTTTATATCTGCCATCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR GCA 90 bp | GAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACATCATGCTACAAATTCGAACTCGCTTGTGCTTaGCGCAAGGCCACTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ESHALGSLLCPSTSCYKFELACA*RKATGG Trigger: ACCCCCAGTGGCCTTGCGGCAAGCACAAGCGAGTTC...GAATTTGTAGCATGATGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | AGATGTCAGTCTGGATGTGAGTCGCTGTTACCTAGAAGGCATTACAAGTCAGCTAAGGACAGGGCAGCCTaGCGGCGCCGCGGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RCQSGCESLLPRRHYKSAKDRAA*RRRGSM Trigger: CATGGACCCGCGGCGCCGCCAGGCTGCCCTGTCCTT...AGCTGACTTGTAATGCCTTCTAGGTAACAGCGACTCACATCCAGACTGACATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | CCGATGGCAGATATAAAAATAGGTTGGCACACTCTCGACACAGGGCGAGGGACCCGGAGCCCAAAAAGCTaGCCGATGGCACCTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: PMADIKIGWHTLDTGRGTRSPKS*PMAPAR Trigger: ACGTGCAGGTGCCATCGGCCAGCTTTTTGGGCTCCG...GGTCCCTCGCCCTGTGTCGAGAGTGTGCCAACCTATTTTTATATCTGCCATCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | CCGATGGCAGATATAAAAATAGGTTGGCACACTCTCGACACAGGGCGAGGGACCTCTCCTTCAGGCTCATaGCCCCTGCTGACTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PMADIKIGWHTLDTGRGTSPSGS*PLLTAS Trigger: GGAGGCAGTCAGCAGGGGCCATGAGCCTGAAGGAGA...GGTCCCTCGCCCTGTGTCGAGAGTGTGCCAACCTATTTTTATATCTGCCATCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | CCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATGTCATCCAGGAGGTTTaGGTCATAGTCCATAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PQTLAHPHPCAPGKCTSDVIQEV*VIVHKV Trigger: GACTTTATGGACTATGACCCAAACCTCCTGGATGAC...ATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | GAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACATCATGCTACAAATTCAGGCCATGGCCACCGTaGGCTCCTCAAAGCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ESHALGSLLCPSTSCYKFRPWPP*APQSHS Trigger: ACTGTGGCTTTGAGGAGCCCACGGTGGCCATGGCCT...GAATTTGTAGCATGATGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR TCA 90 bp | CCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATGAGGAAACTTCTCCTTaGAGGTTTCATTCATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQTLAHPHPCAPGKCTSDEETSP*RFHSCP Trigger: AGGACATGAATGAAACCTTCAAGGAGAAGTTTCCTC...ATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR TCA 90 bp | GCAGATATAAAAATAGGTTGGCACACTCTCGACACAGGGCGAGGGACCGCGAAGTCGTGCTCTGGCAGGTaGAGTGCAAACTCCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ADIKIGWHTLDTGRGTAKSCSGR*SANSKA Trigger: GGCCTTGGAGTTTGCACTTCACCTGCCAGAGCACGA...CTTCGCGGTCCCTCGCCCTGTGTCGAGAGTGTGCCAACCTATTTTTATATCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR TCA 90 bp | CCTCAAGTTTCTCATGTGCCTGAGAGGAAGAGCTGGGCACAGCTTAGCTCTGGCGTCTATAGTGGGGCATaGCTTCGTGCTCTGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQVSHVPERKSWAQLSSGVYSGA*LRALAG Trigger: ACCTGCCAGAGCACGAAGTCATGCCCCACTATAGAC...GCCAGAGCTAAGCTGTGCCCAGCTCTTCCTCTCAGGCACATGAGAAACTTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR GCA 90 bp | TGTTACCTAGAAGGCATTACAAGTCAGCTCCATAGAAGGTGGGCGTTGGCTTTGGGCGCCGCGGGTCCATaGGCGGCTTACGAAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CYLEGITSQLHRRWALALGAAGP*AAYEEV Trigger: AACCTCTTCGTAAGCCGCGCATGGACCCGCGGCGCC...CAAAGCCAACGCCCACCTTCTATGGAGCTGACTTGTAATGCCTTCTAGGTAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCATCCAAAGATGATCTCTaGGAGATGAGGCGACGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAHAFSASLKSPGTRGFSSKDDL*EMRRRL Trigger: CAGACGTCGCCTCATCTCCCAGAGATCATCTTTGGA...TGAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | GCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCAGCGAGGCGGTGGAGTCTATaGTATTTCTACGGTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AHAFSASLKSPGTRGFSARRWSL*YFYGSQ Trigger: TTGGGAACCGTAGAAATACCATAGACTCCACCGCCT...CGCTGAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR TCA 90 bp | GAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACATCATGCTACAAATTCATGATCTCTGGGAGATaGGGCGACGTCTGGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESHALGSLLCPSTSCYKFMISGR*GDVWTS Trigger: AGAGGTCCAGACGTCGCCTCATCTCCCAGAGATCAT...GAATTTGTAGCATGATGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR TCA 90 bp | GAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACATCATGCTACAAATTCTGGTCTGGGAGAACCTaGGAGTGTTCGACATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ESHALGSLLCPSTSCYKFWSGRT*ECSTSP Trigger: CGGAGATGTCGAACACTCTCAGGTTCTCCCAGACCA...GAATTTGTAGCATGATGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR TCA 90 bp | CCTCAAGTTTCTCATGTGCCTGAGAGGAAGAGCTGGGCACAGCTTAGCTCTGGCCACCTTCAAGGCCAATaGTCTCCTTCAGGCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PQVSHVPERKSWAQLSSGHLQGQ*SPSGSW Trigger: CCATGAGCCTGAAGGAGATCATTGGCCTTGAAGGTG...GCCAGAGCTAAGCTGTGCCCAGCTCTTCCTCTCAGGCACATGAGAAACTTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR TCA 90 bp | AGTGTAACAGTGTCCCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAGAGGAAACTTCTCCTTaGAGGTTTCATTCATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVTVSRRHLHTRTPVPQGEETSP*RFHSCP Trigger: AGGACATGAATGAAACCTTCAAGGAGAAGTTTCCTC...TCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGGGACACTGTTACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | CCGGAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACATCATGCTACAAATCCAAAGATGATCTCTaGGAGATGAGGCGACGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PESHALGSLLCPSTSCYKSKDDL*EMRRRL Trigger: CAGACGTCGCCTCATCTCCCAGAGATCATCTTTGGA...TTTGTAGCATGATGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCAAGGCGGTGGAGTCTATaGTATTTCTACGGTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PAHAFSASLKSPGTRGFSRRWSL*YFYGSQ Trigger: TTGGGAACCGTAGAAATACCATAGACTCCACCGCCT...TGAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | CCGGAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACATCATGCTACAAAGGGAGAAGGAGGCGGTaGAGTCTATGGTATTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PESHALGSLLCPSTSCYKGRRRR*SLWYFY Trigger: GTAGAAATACCATAGACTCCACCGCCTCCTTCTCCC...TTTGTAGCATGATGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGTCGCTGTTACCTAGAAGGCATTACAAGTCAGCTCCATAGAAGGTGGGCGATGGAGAGGCTTCGGTaGCTCAGGCTCCGAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSRCYLEGITSQLHRRWAMERLR*LRLRNW Trigger: CCAGTTTCGGAGCCTGAGCCACCGAAGCCTCTCCAT...CGCCCACCTTCTATGGAGCTGACTTGTAATGCCTTCTAGGTAACAGCGACTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| 3UTR CAA 72 bp | GGGAAGTGCACTTCCGATGGCAGATATAAAAATAGGTaGGCACACTCTCGACACAGGGCGAGGGACCGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GKCTSDGRYKNR*AHSRHRARDRE Trigger: TTCGCGGTCCCTCGCCCTGTGTCGAGAGTGTGCCAACCTATTTTTATATCTGCCATCGGAAGTGCACTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR GCA 90 bp | TCTAACATAGAGCACAGGAATACACGCTATGGAGTGCAGCCCTCATGTCTCCACGTCAGAACTCGCTTGTaGTTGCCGCAAGGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNIEHRNTRYGVQPSCLHVRTRL*LPQGHW Trigger: CCAGTGGCCTTGCGGCAAGCACAAGCGAGTTCTGAC...GTGGAGACATGAGGGCTGCACTCCATAGCGTGTATTCCTGTGCTCTATGTTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCAGTCATCCAGGAGGTTTaGGTCATAGTCCATAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PAHAFSASLKSPGTRGFSVIQEV*VIVHKV Trigger: GACTTTATGGACTATGACCCAAACCTCCTGGATGAC...TGAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | GAGGCCTTCATCATCCCCAGCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGCGTAGTCAATCACTGTaGTCATGTATGAAGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EAFIIPSTRLLSKPQVSRRSQSL*SCMKGR Trigger: CCTTCCCTTCATACATGACCACAGTGATTGACTACG...CCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGCTGGGGATGATGAAGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | CACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCAGCGAAACGTAGTCAATCACTGTaGTCATGTATGAAGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HAFSASLKSPGTRGFSAKRSQSL*SCMKGR Trigger: CCTTCCCTTCATACATGACCACAGTGATTGACTACG...TTTCGCTGAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAGAAGGCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR GCA 90 bp | AGATGTCAGTCTGGATGTGAGTCGCTGTTACCTAGAAGGCATTACAAGTCAGCTTCCCAGGTCACTTCCTaGATCAAGGCTCCCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RCQSGCESLLPRRHYKSASQVTS*IKAPLG Trigger: ACCCAGGGGAGCCTTGATGCAGGAAGTGACCTGGGA...AGCTGACTTGTAATGCCTTCTAGGTAACAGCGACTCACATCCAGACTGACATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR TCA 90 bp | AGTCTGGATGTGAGTCGCTGTTACCTAGAAGGCATTACAAGTCAGCTCCATAGATGGTCTGGGAGAACCTaGGAGTGTTCGACATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLDVSRCYLEGITSQLHRWSGRT*ECSTSP Trigger: CGGAGATGTCGAACACTCTCAGGTTCTCCCAGACCA...TCTATGGAGCTGACTTGTAATGCCTTCTAGGTAACAGCGACTCACATCCAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS-3UTR TCA 90 bp | AGTCTGGATGTGAGTCGCTGTTACCTAGAAGGCATTACAAGTCAGCTCCATAGATGTTCAGCTTCCCCCTaGGGGCCAGCTTCTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLDVSRCYLEGITSQLHRCSASP*GPASQS Trigger: ACTTTGAGAAGCTGGCCCTCAGGGGGAAGCTGAACA...TCTATGGAGCTGACTTGTAATGCCTTCTAGGTAACAGCGACTCACATCCAGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGTCGCTGTTACCTAGAAGGCATTACAAGTCAGCTCCATAGAAGGTGGGCGTCCCAAAGGCATTTGTaGGTAGTAGAAACTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VSRCYLEGITSQLHRRWASQRHL*VVETGY Trigger: ATACCCAGTTTCTACTACCCACAAATGCCTTTGGGA...CGCCCACCTTCTATGGAGCTGACTTGTAATGCCTTCTAGGTAACAGCGACTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CCA 90 bp | TGTTACCTAGAAGGCATTACAAGTCAGCTCCATAGAAGGTGGGCGTTGGCTTTGTCCCAAAGGCATTTGTaGGTAGTAGAAACTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: CYLEGITSQLHRRWALALSQRHL*VVETGY Trigger: ATACCCAGTTTCTACTACCCACAAATGCCTTTGGGA...CAAAGCCAACGCCCACCTTCTATGGAGCTGACTTGTAATGCCTTCTAGGTAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| 3UTR CAA 72 bp | TCACAATTTTGTACTAACAATCAGTTCAACCACAGCTaGAAATGTAGTTTGTCCCAGCTGCAAAAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SQFCTNNQFNHS*KCSLSQLQKPQ Trigger: TTGTGGCTTTTGCAGCTGGGACAAACTACATTTCAAGCTGTGGTTGAACTGATTGTTAGTACAAAATTGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS GCA 90 bp | GCTGGAACCCGAGCCGGCGGTCCACGGCGCGGCCGCGGTGCCCGGTaGCGAGAACGCGTTGCAGCCAGCGGCCAGCAGGCTGAGCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGTRAGGPRRGRGAR*RERVAASGQQAEPS Trigger: GCTCGGCTCAGCCTGCTGGCCGCTGGCTGCAACGCGTTCTCGGCACCGGGCACCGCGGCCGCGCCGTGGACCGCCGGCTCGGGTTCCAGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS TCA 90 bp | CGGTGCCCGGTGCCGAGAACGCGTTGCAGCCAGCGGCCAGCAGGCTaGGCCGAGCCCTTGCTCCGGGCTTGGTCCCGCCGCCCTCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RCPVPRTRCSQRPAG*AEPLLRAWSRRPPR Trigger: GCGAGGAGGGCGGCGGGACCAAGCCCGGAGCAAGGGCTCGGCTCAGCCTGCTGGCCGCTGGCTGCAACGCGTTCTCGGCACCGGGCACCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS TCA 90 bp | CGGCCCGTCAGGCAACTGCAGCTGAGCACCGGTGACAGCTGGAGCTaGACGGGGCGGCTGAGATGGCTCTCCCAACACCCGGGGGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: RPVRQLQLSTGDSWS*TGRLRWLSQHPGDQ Trigger: CTGGTCCCCCGGGTGTTGGGAGAGCCATCTCAGCCGCCCCGTTCAGCTCCAGCTGTCACCGGTGCTCAGCTGCAGTTGCCTGACGGGCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS TCA 90 bp | GTCCGGCGCCTCCCGGCCCGTCAGGCAACTGCAGCTGAGCACCGGTaGCAGCTGGAGCTGAACGGGGCGGCTGAGATGGCTCTCCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: VRRLPARQATAAEHR*QLELNGAAEMALPT Trigger: TGTTGGGAGAGCCATCTCAGCCGCCCCGTTCAGCTCCAGCTGTCACCGGTGCTCAGCTGCAGTTGCCTGACGGGCCGGGAGGCGCCGGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CCA 90 bp | GCCGCTCGTACTCCCGGGGGTCCCGGAGCCCAAAAAGCTGGCCGATaGCACCTGCACGTTGGTGAAGGCATCGTCCTCCTCCAGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AARTPGGPGAQKAGR*HLHVGEGIVLLQLL Trigger: GAGGAGCTGGAGGAGGACGATGCCTTCACCAACGTGCAGGTGCCATCGGCCAGCTTTTTGGGCTCCGGGACCCCCGGGAGTACGAGCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS GCA 90 bp | GTACTCCCGGGGGTCCCGGAGCCCAAAAAGCTGGCCGATGGCACCTaGACGTTGGTGAAGGCATCGTCCTCCTCCAGCTCCTCCTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: VLPGVPEPKKLADGT*TLVKASSSSSSSCP Trigger: CGGACAGGAGGAGCTGGAGGAGGACGATGCCTTCACCAACGTGCAGGTGCCATCGGCCAGCTTTTTGGGCTCCGGGACCCCCGGGAGTAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CCA 90 bp | CACTTCCTGCATCAAGGCTCCCCTGGGTGCTGCCAGCCCGGCCCATaGAGAGGCTTCGGTGGCTCAGGCTCCGAAACTGGGAGAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HFLHQGSPGCCQPGP*RGFGGSGSETGRRR Trigger: CCTCCTTCTCCCAGTTTCGGAGCCTGAGCCACCGAAGCCTCTCCATGGGCCGGGCTGGCAGCACCCAGGGGAGCCTTGATGCAGGAAGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CAA 90 bp | CCTCAAGTTTCTCATGTGCCTGAGAGGAAGAGCTGGGCACAGCTTAGCTCTGGCGCCCTTGCTCCGGGCTaGGTCCCGCCGCCCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PQVSHVPERKSWAQLSSGALAPG*VPPPSS Trigger: CGAGGAGGGCGGCGGGACCAAGCCCGGAGCAAGGGC...GCCAGAGCTAAGCTGTGCCCAGCTCTTCCTCTCAGGCACATGAGAAACTTGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CAA 90 bp | GAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACATCATGCTACAAATTCGCCCTTGCTCCGGGCTaGGTCCCGCCGCCCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ESHALGSLLCPSTSCYKFALAPG*VPPPSS Trigger: CGAGGAGGGCGGCGGGACCAAGCCCGGAGCAAGGGC...GAATTTGTAGCATGATGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CAA 90 bp | CGAAGCAGCATCCCGGAATCCCACGCACTCGGTTCCCTCCTCTGTCCCAGCACAAGAACTCGCTTGTGCTaGCCGCAAGGCCACTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSSIPESHALGSLLCPSTRTRLC*PQGHWG Trigger: CCCCCAGTGGCCTTGCGGCAAGCACAAGCGAGTTCT...TGTGCTGGGACAGAGGAGGGAACCGAGTGCGTGGGATTCCGGGATGCTGCTTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CAA 90 bp | CCCCTCTCTGGGAGTAAGCGAGGCTCCACTGTGCTCAGGAAGCAGTCTTGGCCCAGAACTCGCTTGTGCTaGCCGCAAGGCCACTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLSGSKRGSTVLRKQSWPRTRLC*PQGHWG Trigger: CCCCCAGTGGCCTTGCGGCAAGCACAAGCGAGTTCT...GGGCCAAGACTGCTTCCTGAGCACAGTGGAGCCTCGCTTACTCCCAGAGAGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CCA 90 bp | CCAGCCCGGCCCATGGAGAGGCTTCGGTGGCTCAGGCTCCGAAACTaGGAGAAGGAGGCGGTGGAGTCTATGGTATTTCTACGGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PARPMERLRWLRLRN*EKEAVESMVFLRFP Trigger: TGGGAACCGTAGAAATACCATAGACTCCACCGCCTCCTTCTCCCAGTTTCGGAGCCTGAGCCACCGAAGCCTCTCCATGGGCCGGGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CAA 90 bp | AAGAGCTGGGCACAGCTTAGCTCTGGCTGTGGGAGCTGGGAGGCCTTCATCATCGATGGCACCTGCACGTaGGTGAAGGCATCGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSWAQLSSGCGSWEAFIIDGTCT*VKASSS Trigger: GGAGGACGATGCCTTCACCAACGTGCAGGTGCCATC...GATGATGAAGGCCTCCCAGCTCCCACAGCCAGAGCTAAGCTGTGCCCAGCTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CAA 90 bp | GAGGCCTTCATCATCCCCAGCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGGATGGCACCTGCACGTaGGTGAAGGCATCGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EAFIIPSTRLLSKPQVSRDGTCT*VKASSS Trigger: GGAGGACGATGCCTTCACCAACGTGCAGGTGCCATC...CCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGCTGGGGATGATGAAGGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CAA 90 bp | CCGCAGACACTTGCACACCCGCACCCCTGTGCCCCAGGGAAGTGCACTTCCGATGGTTCCCAAAGGCATTaGTGGGTAGTAGAAACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PQTLAHPHPCAPGKCTSDGSQRH*WVVETG Trigger: CCCAGTTTCTACTACCCACAAATGCCTTTGGGAACC...ATCGGAAGTGCACTTCCCTGGGGCACAGGGGTGCGGGTGTGCAAGTGTCTGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCAAGCTTCCGGTTCTGCTaGTTCAGCTTCCCCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PAHAFSASLKSPGTRGFSSFRFC*FSFPLR Trigger: CCTCAGGGGGAAGCTGAACAAGCAGAACCGGAAGCT...TGAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CAA 90 bp | CACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCAGCGAAAAGGTCACTTCCGACCTaGGCCGCTAGCAGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: HAFSASLKSPGTRGFSAKRSLPT*AASSTQ Trigger: CTGTGTGCTGCTAGCGGCCAAGGTCGGAAGTGACCT...TTTCGCTGAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAGAAGGCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CAA 90 bp | CTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCAGCGAAAGCAGAGCTAGGTCACTTCCGACCTaGGCCGCTAGCAGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: LSKPQVSRNSGLLSESRARSLPT*AASSTQ Trigger: CTGTGTGCTGCTAGCGGCCAAGGTCGGAAGTGACCT...AGCTCTGCTTTCGCTGAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS TCA 90 bp | ACACTGTCTTCCCATCGGCACCCAGTTCCACACCTTCAAGGCCAATaGTCTCCTTCAGGCTCATGGCCCCTGCTGACTGCCTCCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TLSSHRHPVPHLQGQ*SPSGSWPLLTASLH Trigger: ATGGAGGGAGGCAGTCAGCAGGGGCCATGAGCCTGAAGGAGATCATTGGCCTTGAAGGTGTGGAACTGGGTGCCGATGGGAAGACAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS TCA 90 bp | CACACCTTCAAGGCCAATGATCTCCTTCAGGCTCATGGCCCCTGCTaGCTGCCTCCCTCCATCCAACTTCAGGTCCCCGACTTGGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: HTFKANDLLQAHGPC*LPPSIQLQVPDLGT Trigger: AGTACCCAAGTCGGGGACCTGAAGTTGGATGGAGGGAGGCAGTCAGCAGGGGCCATGAGCCTGAAGGAGATCATTGGCCTTGAAGGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171109.9 |
||
| CDS GCA 90 bp | CCTTCAAGGCCAATGATCTCCTTCAGGCTCATGGCCCCTGCTGACTaGCTCCCTCCATCCAACTTCAGGTCCCCGACTTGGGTACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSRPMISFRLMAPAD*LPPSNFRSPTWVLS Trigger: AGACAGTACCCAAGTCGGGGACCTGAAGTTGGATGGAGGGAGGCAGTCAGCAGGGGCCATGAGCCTGAAGGAGATCATTGGCCTTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171109.9 |
||
| CDS TCA 90 bp | CACACCTTCAAGGCCAATGATCTCCTTCAGGCTCATGGCCCCTGCTaGCTGCCTCCCTCCATCCAACTTCAGGTCCCTGCCATTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HTFKANDLLQAHGPC*LPPSIQLQVPAILG Trigger: ACCAAGAATGGCAGGGACCTGAAGTTGGATGGAGGGAGGCAGTCAGCAGGGGCCATGAGCCTGAAGGAGATCATTGGCCTTGAAGGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046948.10 |
||
| CDS GCA 90 bp | CCTTCAAGGCCAATGATCTCCTTCAGGCTCATGGCCCCTGCTGACTaGCTCCCTCCATCCAACTTCAGGTCCCTGCCATTCTTGGTATCG | + |
|
Preference number: 5 (lower is better) Translates to: PSRPMISFRLMAPAD*LPPSNFRSLPFLVS Trigger: CGATACCAAGAATGGCAGGGACCTGAAGTTGGATGGAGGGAGGCAGTCAGCAGGGGCCATGAGCCTGAAGGAGATCATTGGCCTTGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046948.10 |
||
| CDS TCA 90 bp | CCGGAGAGGGGCATTCTCTTCAATATCTTCCAGGGTCTCCAAAGATaGTCTCTGGGAGATGAGGCGACGTCTGGACCTCTGCAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PERGILFNIFQGLQR*SLGDEATSGPLQLL Trigger: GAGCAGCTGCAGAGGTCCAGACGTCGCCTCATCTCCCAGAGATCATCTTTGGAGACCCTGGAAGATATTGAAGAGAATGCCCCTCTCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CAA 90 bp | CCGATGGCAGATATAAAAATAGGTTGGCACACTCTCGACACAGGGCGAGGGACCAGCTTCCGGTTCTGCTaGTTCAGCTTCCCCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PMADIKIGWHTLDTGRGTSFRFC*FSFPLR Trigger: CCTCAGGGGGAAGCTGAACAAGCAGAACCGGAAGCT...GGTCCCTCGCCCTGTGTCGAGAGTGTGCCAACCTATTTTTATATCTGCCATCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CCA 90 bp | AGAGGCTTCGGTGGCTCAGGCTCCGAAACTGGGAGAAGGAGGCGGTaGAGTCTATGGTATTTCTACGGTTCCCAAAGGCATTTGTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RGFGGSGSETGRRRR*SLWYFYGSQRHLWV Trigger: TACCCACAAATGCCTTTGGGAACCGTAGAAATACCATAGACTCCACCGCCTCCTTCTCCCAGTTTCGGAGCCTGAGCCACCGAAGCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS GCA 90 bp | AGTCGGAACTTCTCTTCCAGTTTGTCAATCAGGTGCTTGACCTCGTaGTTTCTGAGGTCACTTCCGACCTTGGCCGCTAGCAGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: SRNFSSSLSIRCLTS*FLRSLPTLAASSTQ Trigger: CTGTGTGCTGCTAGCGGCCAAGGTCGGAAGTGACCTCAGAAAGCACGAGGTCAAGCACCTGATTGACAAACTGGAAGAGAAGTTCCGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CCA 90 bp | GGTGGCTCAGGCTCCGAAACTGGGAGAAGGAGGCGGTGGAGTCTATaGTATTTCTACGGTTCCCAAAGGCATTTGTGGGTAGTAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: GGSGSETGRRRRWSL*YFYGSQRHLWVVET Trigger: AGTTTCTACTACCCACAAATGCCTTTGGGAACCGTAGAAATACCATAGACTCCACCGCCTCCTTCTCCCAGTTTCGGAGCCTGAGCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGGAAGAGCTGGGCACAGCTTAGCTCTGGCTGTGGGAGCTGGGAGGCCTTCTTCAGGCTCCTGATTTaGCTGAGTGTTAATTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: ERKSWAQLSSGCGSWEAFFRLLI*LSVNLM Trigger: CATTAAATTAACACTCAGCAAAATCAGGAGCCTGAA...GAAGGCCTCCCAGCTCCCACAGCCAGAGCTAAGCTGTGCCCAGCTCTTCCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS-3UTR CAA 90 bp | CCCAGCACACGCCTTCTCAGCAAGCCTCAAGTCTCCAGGAACTCGGGGCTTCTCTTCAGGCTCCTGATTTaGCTGAGTGTTAATTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: PSTRLLSKPQVSRNSGLLFRLLI*LSVNLM Trigger: CATTAAATTAACACTCAGCAAAATCAGGAGCCTGAA...GAGAAGCCCCGAGTTCCTGGAGACTTGAGGCTTGCTGAGAAGGCGTGTGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CCA 90 bp | AGGCGGTGGAGTCTATGGTATTTCTACGGTTCCCAAAGGCATTTGTaGGTAGTAGAAACTGGGTATAAGACACTGTCTTCCCATCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RRWSLWYFYGSQRHL*VVETGYKTLSSHRH Trigger: GTGCCGATGGGAAGACAGTGTCTTATACCCAGTTTCTACTACCCACAAATGCCTTTGGGAACCGTAGAAATACCATAGACTCCACCGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS GCA 72 bp | CGAGCCGGCGGTCCACGGCGCGGCCGCGGTGCCCGGTaGCGAGAACGCGTTGCAGCCAGCGGCCAGCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RAGGPRRGRGAR*RERVAASGQQA Trigger: AGCCTGCTGGCCGCTGGCTGCAACGCGTTCTCGGCACCGGGCACCGCGGCCGCGCCGTGGACCGCCGGCTCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CAA 72 bp | CACGGCGCGGCCGCGGTGCCCGGTGCCGAGAACGCGTaGCAGCCAGCGGCCAGCAGGCTGAGCCGAGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: HGAAAVPGAENA*QPAASRLSRAL Trigger: AAGGGCTCGGCTCAGCCTGCTGGCCGCTGGCTGCAACGCGTTCTCGGCACCGGGCACCGCGGCCGCGCCGTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS TCA 72 bp | GTGCCGAGAACGCGTTGCAGCCAGCGGCCAGCAGGCTaGGCCGAGCCCTTGCTCCGGGCTTGGTCCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VPRTRCSQRPAG*AEPLLRAWSRR Trigger: GCGGCGGGACCAAGCCCGGAGCAAGGGCTCGGCTCAGCCTGCTGGCCGCTGGCTGCAACGCGTTCTCGGCAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CCA 72 bp | GGCGACGTCTGGACCTCTGCAGCTGCTCCAAGGCGCTaGTGCTGCCGCCCTGGCCTGACTGCTCCAAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GDVWTSAAAPRR*CCRPGLTAPRR Trigger: GCGCCTTGGAGCAGTCAGGCCAGGGCGGCAGCACCAGCGCCTTGGAGCAGCTGCAGAGGTCCAGACGTCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS GCA 72 bp | GACGTCTGGACCTCTGCAGCTGCTCCAAGGCGCTGGTaGTGCCGCCCTGGCCTGACTGCTCCAAGGCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: DVWTSAAAPRRW*CRPGLTAPRRS Trigger: ACTGCGCCTTGGAGCAGTCAGGCCAGGGCGGCAGCACCAGCGCCTTGGAGCAGCTGCAGAGGTCCAGACGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CCA 72 bp | TGGGTGCTGCCAGCCCGGCCCATGGAGAGGCTTCGGTaGCTCAGGCTCCGAAACTGGGAGAAGGAGGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WVLPARPMERLR*LRLRNWEKEAV Trigger: CACCGCCTCCTTCTCCCAGTTTCGGAGCCTGAGCCACCGAAGCCTCTCCATGGGCCGGGCTGGCAGCACCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS GCA 72 bp | CCAGGTCACTTCCTGCATCAAGGCTCCCCTGGGTGCTaGCAGCCCGGCCCATGGAGAGGCTTCGGTGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PGHFLHQGSPGC*QPGPWRGFGGS Trigger: TGAGCCACCGAAGCCTCTCCATGGGCCGGGCTGGCAGCACCCAGGGGAGCCTTGATGCAGGAAGTGACCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS TCA 72 bp | CAGCTGCTCCAAGGCGCTGGTGCTGCCGCCCTGGCCTaGCTGCTCCAAGGCGCAGTAGTTCTGCGAGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QLLQGAGAAALA*LLQGAVVLRVL Trigger: CAGAACTCGCAGAACTACTGCGCCTTGGAGCAGTCAGGCCAGGGCGGCAGCACCAGCGCCTTGGAGCAGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS GCA 72 bp | GGGGTCCCGGAGCCCAAAAAGCTGGCCGATGGCACCTaGACGTTGGTGAAGGCATCGTCCTCCTCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GVPEPKKLADGT*TLVKASSSSSS Trigger: GGAGCTGGAGGAGGACGATGCCTTCACCAACGTGCAGGTGCCATCGGCCAGCTTTTTGGGCTCCGGGACCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CCA 72 bp | ACTCCCGGGGGTCCCGGAGCCCAAAAAGCTGGCCGATaGCACCTGCACGTTGGTGAAGGCATCGTCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TPGGPGAQKAGR*HLHVGEGIVLL Trigger: GAGGAGGACGATGCCTTCACCAACGTGCAGGTGCCATCGGCCAGCTTTTTGGGCTCCGGGACCCCCGGGAGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CAA 72 bp | CCGGAGCCCAAAAAGCTGGCCGATGGCACCTGCACGTaGGTGAAGGCATCGTCCTCCTCCAGCTCCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PEPKKLADGTCT*VKASSSSSSSC Trigger: ACAGGAGGAGCTGGAGGAGGACGATGCCTTCACCAACGTGCAGGTGCCATCGGCCAGCTTTTTGGGCTCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CAA 72 bp | TGCTTGACCTCGTGCTTTCTGAGGTCACTTCCGACCTaGGCCGCTAGCAGCACACAGGCTCCCGCACAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CLTSCFLRSLPT*AASSTQAPAQS Trigger: GCTCTGTGCGGGAGCCTGTGTGCTGCTAGCGGCCAAGGTCGGAAGTGACCTCAGAAAGCACGAGGTCAAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS TCA 72 bp | TCCCATCGGCACCCAGTTCCACACCTTCAAGGCCAATaGTCTCCTTCAGGCTCATGGCCCCTGCTGACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SHRHPVPHLQGQ*SPSGSWPLLTA Trigger: GGCAGTCAGCAGGGGCCATGAGCCTGAAGGAGATCATTGGCCTTGAAGGTGTGGAACTGGGTGCCGATGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CCA 72 bp | ATGGCCACCGTGGGCTCCTCAAAGCCACAGTCCTCCTaGGCAAGCTTCCGCATCTCTCTTTTCAGGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: MATVGSSKPQSS*ASFRISLFRLL Trigger: CAGGAGCCTGAAAAGAGAGATGCGGAAGCTTGCCCAGGAGGACTGTGGCTTTGAGGAGCCCACGGTGGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CAA 90 bp | TCAATCAGGTGCTTGACCTCGTGCTTTCTGAGGTCACTTCCGACCTaGGCCGCTAGCAGCACACAGGCTCCCGCACAGAGCTTCCGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SIRCLTSCFLRSLPT*AASSTQAPAQSFRF Trigger: GAACCGGAAGCTCTGTGCGGGAGCCTGTGTGCTGCTAGCGGCCAAGGTCGGAAGTGACCTCAGAAAGCACGAGGTCAAGCACCTGATTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CCA 72 bp | GGTGGCTCAGGCTCCGAAACTGGGAGAAGGAGGCGGTaGAGTCTATGGTATTTCTACGGTTCCCAAAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GGSGSETGRRRR*SLWYFYGSQRH Trigger: ATGCCTTTGGGAACCGTAGAAATACCATAGACTCCACCGCCTCCTTCTCCCAGTTTCGGAGCCTGAGCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CCA 72 bp | GACTGCCTCCCTCCATCCAACTTCAGGTCCCCGACTTaGGTACTGTCTCGATACGGCAGCACGGAAAATATA | + |
|
Preference number: 6 (lower is better) Translates to: DCLPPSNFRSPT*VLSRYGSTENI Trigger: TATATTTTCCGTGCTGCCGTATCGAGACAGTACCCAAGTCGGGGACCTGAAGTTGGATGGAGGGAGGCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171109.9 |
||
| CDS GCA 72 bp | TTCTCTTCCAGTTTGTCAATCAGGTGCTTGACCTCGTaGTTTCTGAGGTCACTTCCGACCTTGGCCGCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: FSSSLSIRCLTS*FLRSLPTLAAS Trigger: GCTAGCGGCCAAGGTCGGAAGTGACCTCAGAAAGCACGAGGTCAAGCACCTGATTGACAAACTGGAAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CCA 72 bp | TCTTCAATATCTTCCAGGGTCTCCAAAGATGATCTCTaGGAGATGAGGCGACGTCTGGACCTCTGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSISSRVSKDDL*EMRRRLDLCSC Trigger: GCAGCTGCAGAGGTCCAGACGTCGCCTCATCTCCCAGAGATCATCTTTGGAGACCCTGGAAGATATTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CCA 72 bp | GGCTCCGAAACTGGGAGAAGGAGGCGGTGGAGTCTATaGTATTTCTACGGTTCCCAAAGGCATTTGTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GSETGRRRRWSL*YFYGSQRHLWV Trigger: TACCCACAAATGCCTTTGGGAACCGTAGAAATACCATAGACTCCACCGCCTCCTTCTCCCAGTTTCGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS TCA 72 bp | GGCATTCTCTTCAATATCTTCCAGGGTCTCCAAAGATaGTCTCTGGGAGATGAGGCGACGTCTGGACCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GILFNIFQGLQR*SLGDEATSGPL Trigger: CAGAGGTCCAGACGTCGCCTCATCTCCCAGAGATCATCTTTGGAGACCCTGGAAGATATTGAAGAGAATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CAA 72 bp | AGTCGGAACTTCTCTTCCAGTTTGTCAATCAGGTGCTaGACCTCGTGCTTTCTGAGGTCACTTCCGACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SRNFSSSLSIRC*TSCFLRSLPTL Trigger: CAAGGTCGGAAGTGACCTCAGAAAGCACGAGGTCAAGCACCTGATTGACAAACTGGAAGAGAAGTTCCGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CAA 90 bp | AGGAGGCGGTGGAGTCTATGGTATTTCTACGGTTCCCAAAGGCATTaGTGGGTAGTAGAAACTGGGTATAAGACACTGTCTTCCCATCGG | + |
|
Preference number: 6 (lower is better) Translates to: RRRWSLWYFYGSQRH*WVVETGYKTLSSHR Trigger: CCGATGGGAAGACAGTGTCTTATACCCAGTTTCTACTACCCACAAATGCCTTTGGGAACCGTAGAAATACCATAGACTCCACCGCCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS CAA 72 bp | AGTTCTCGTCTGTTCAGTCGGAACTTCTCTTCCAGTTaGTCAATCAGGTGCTTGACCTCGTGCTTTCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSRLFSRNFSSS*SIRCLTSCFLR Trigger: CCTCAGAAAGCACGAGGTCAAGCACCTGATTGACAAACTGGAAGAGAAGTTCCGACTGAACAGACGAGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
||
| CDS TCA 72 bp | ATGAATTTTCTTGAAATTCTTTGGTCTGGGAGAACCTaGGAGTGTTCGACATCTCCGGAGAGGGGCATTCTC | + |
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Preference number: 6 (lower is better) Translates to: MNFLEILWSGRT*ECSTSPERGIL Trigger: GAGAATGCCCCTCTCCGGAGATGTCGAACACTCTCAGGTTCTCCCAGACCAAAGAATTTCAAGAAAATTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS CCA 72 bp | AGTCTATGGTATTTCTACGGTTCCCAAAGGCATTTGTaGGTAGTAGAAACTGGGTATAAGACACTGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SLWYFYGSQRHL*VVETGYKTLSS Trigger: GGAAGACAGTGTCTTATACCCAGTTTCTACTACCCACAAATGCCTTTGGGAACCGTAGAAATACCATAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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| CDS CAA 72 bp | TGGAGTCTATGGTATTTCTACGGTTCCCAAAGGCATTaGTGGGTAGTAGAAACTGGGTATAAGACACTGTCT | + |
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Preference number: 6 (lower is better) Translates to: WSLWYFYGSQRH*WVVETGYKTLS Trigger: AGACAGTGTCTTATACCCAGTTTCTACTACCCACAAATGCCTTTGGGAACCGTAGAAATACCATAGACTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046948.10 ENSMUST00000171109.9 |
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