Pregenerated sensors for CAB39L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021981Ensembl transcript IDs: ENSMUST00000022553.6, ENSMUST00000223678.2, ENSMUST00000225595.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGAGAGAGTCACAGCCCATGGGTCTCTGTCCCTGTAACCTCTATTaGTCTCACTCGGCCCTCAGCTGCTTCCAGACTAGCCCTCAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: LRESQPMGLCPCNLY*SHSALSCFQTSPQK Trigger: CTTCTGAGGGCTAGTCTGGAAGCAGCTGAGGGCCGAGTGAGATCAATAGAGGTTACAGGGACAGAGACCCATGGGCTGTGACTCTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR GCA 90 bp | ACTGGAGGACACACTTCCATTCCTGTCTCTGGATGGGGACATATGTaGCCAAAGGCAAGGAAGACAGCAGTCCAGTGCCATGGGAATTCA | + |
|
Preference number: 1 (lower is better) Translates to: TGGHTSIPVSGWGHM*PKARKTAVQCHGNS Trigger: TGAATTCCCATGGCACTGGACTGCTGTCTTCCTTGCCTTTGGGCACATATGTCCCCATCCAGAGACAGGAATGGAAGTGTGTCCTCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR TCA 90 bp | ACGCTGAGCAGACAATGCTGTGCTGTCTCCCATCTCTTCAGGGTCTaGAAAAGCCTGTCTAAACAGATGGGTCTCCTCCCATCGTCTGTT | + |
|
Preference number: 1 (lower is better) Translates to: TLSRQCCAVSHLFRV*KSLSKQMGLLPSSV Trigger: AACAGACGATGGGAGGAGACCCATCTGTTTAGACAGGCTTTTTCAGACCCTGAAGAGATGGGAGACAGCACAGCATTGTCTGCTCAGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR CCA 90 bp | GGATCCTATGTAACCGGAGTCCCGGACAGTTGTGAGCCATCATGTTaGTGCTGGAAATCACTCTGGTCTTCTGTAAAAGCAACAAGTGCT | + |
|
Preference number: 1 (lower is better) Translates to: GSYVTGVPDSCEPSC*CWKSLWSSVKATSA Trigger: AGCACTTGTTGCTTTTACAGAAGACCAGAGTGATTTCCAGCACCAACATGATGGCTCACAACTGTCCGGGACTCCGGTTACATAGGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| 3UTR TCA 90 bp | TTGTTATGCATGACTCACTTTCCCTCTACTGACGGAAGGATAACATaGCCATCTAGCCCCATGGTTTGTACCTACTGTGATTCCACCTCT | + |
|
Preference number: 1 (lower is better) Translates to: LLCMTHFPSTDGRIT*PSSPMVCTYCDSTS Trigger: AGAGGTGGAATCACAGTAGGTACAAACCATGGGGCTAGATGGTCATGTTATCCTTCCGTCAGTAGAGGGAAAGTGAGTCATGCATAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR TCA 90 bp | ATGTCCTGGGTGACCCAGGGTCCAGCTCTGAACTTACACTGCTTTTaGTCAATGTTTAATATAATGGTTGATTCCATAAGCAATCACAGG | + |
|
Preference number: 1 (lower is better) Translates to: MSWVTQGPALNLHCF*SMFNIMVDSISNHR Trigger: CCTGTGATTGCTTATGGAATCAACCATTATATTAAACATTGATCAAAAGCAGTGTAAGTTCAGAGCTGGACCCTGGGTCACCCAGGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR TCA 90 bp | ACACTGATAGTCGGCTATGGAATGACAGGTTATTACAGAACAAACTaGACCAGAGAGAACCTCTGGTCGTCTGAGACATTTGTTATGCAT | + |
|
Preference number: 1 (lower is better) Translates to: TLIVGYGMTGYYRTN*TRENLWSSETFVMH Trigger: ATGCATAACAAATGTCTCAGACGACCAGAGGTTCTCTCTGGTTCAGTTTGTTCTGTAATAACCTGTCATTCCATAGCCGACTATCAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR GCA 90 bp | CTCTGTAGCTTTCTGTCCAGAAAGTACACAGCTAGGATAAAAGGATaGTGGCAAAGAGCCAATTCAAACCCAGAGAAAAGAAGTGTTTTT | + |
|
Preference number: 1 (lower is better) Translates to: LCSFLSRKYTARIKG*WQRANSNPEKRSVF Trigger: AAAAACACTTCTTTTCTCTGGGTTTGAATTGGCTCTTTGCCAGCATCCTTTTATCCTAGCTGTGTACTTTCTGGACAGAAAGCTACAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR CAA 90 bp | CCCGGCAGAAGTGCCAACAGAACAGTGGTGATTACAGCCACCTGTTaGCAGTTCTCCTCTGAGAGAGTCACAGCCCATGGGTCTCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: PGRSANRTVVITATC*QFSSERVTAHGSLS Trigger: GGACAGAGACCCATGGGCTGTGACTCTCTCAGAGGAGAACTGCAAACAGGTGGCTGTAATCACCACTGTTCTGTTGGCACTTCTGCCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR-3UTR CCA 90 bp | CACGCTGAGCAGACAATGCTGTGCTGTCTCCCATCTCTTCAGGGTCTGAAAAAGCTTGACTTGATGTCCTaGGTGACCCAGGGTCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: HAEQTMLCCLPSLQGLKKLDLMS*VTQGPA Trigger: AGCTGGACCCTGGGTCACCCAGGACATCAAGTCAAG...CTTTTTCAGACCCTGAAGAGATGGGAGACAGCACAGCATTGTCTGCTCAGCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR-3UTR TCA 90 bp | ACTAGTGTTTTGTCTGCATGCATGTTTGTGCCCAGAAGGAGGTGTTGGATCCTAAGTCCCGGACAGTTGTaGGCCATCATGTTGGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TSVLSACMFVPRRRCWILSPGQL*AIMLVL Trigger: CAGCACCAACATGATGGCTCACAACTGTCCGGGACT...TAGGATCCAACACCTCCTTCTGGGCACAAACATGCATGCAGACAAAACACTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTCGTCTGAGACATTTGTTATGCATGACTCACTTTCCCTCTACTGACGGAAGGCCTCAGAAGTTGGAATaGGCATGGGTCATGGGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: GRLRHLLCMTHFPSTDGRPQKLE*AWVMGQ Trigger: CTGACCCATGACCCATGCCCATTCCAACTTCTGAGG...CCTTCCGTCAGTAGAGGGAAAGTGAGTCATGCATAACAAATGTCTCAGACGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR-3UTR CCA 90 bp | GACACTGATAGTCGGCTATGGAATGACAGGTTATTACAGAACAAACTGAACCAGGGCAAGGGAGACAAATaGCTGTCGGGGCAGGACCAT | + |
|
Preference number: 2 (lower is better) Translates to: DTDSRLWNDRLLQNKLNQGKGDK*LSGQDH Trigger: ATGGTCCTGCCCCGACAGCCATTTGTCTCCCTTGCC...CTGGTTCAGTTTGTTCTGTAATAACCTGTCATTCCATAGCCGACTATCAGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAACAAACTGAACCAGAGAGAACCTCTGGTCGTCTGAGACATTTGTTATGCAGACAAGGGCTACAATaGAGAAGAAACGGAGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: TEQTEPERTSGRLRHLLCRQGLQ*RRNGAG Trigger: CCCAGCTCCGTTTCTTCTTCATTGTAGCCCTTGTCT...GCATAACAAATGTCTCAGACGACCAGAGGTTCTCTCTGGTTCAGTTTGTTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR-3UTR TCA 90 bp | GACACTGATAGTCGGCTATGGAATGACAGGTTATTACAGAACAAACTGAACCAGTTTGCAGTTCTCCTCTaGGAGAGTCACAGCCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: DTDSRLWNDRLLQNKLNQFAVLL*ESHSPW Trigger: CCATGGGCTGTGACTCTCTCAGAGGAGAACTGCAAA...CTGGTTCAGTTTGTTCTGTAATAACCTGTCATTCCATAGCCGACTATCAGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR-3UTR GCA 90 bp | GACACTGATAGTCGGCTATGGAATGACAGGTTATTACAGAACAAACTGAACCAGACGCTGAGCAGACAATaGTGTGCTGTCTCCCATCTC | + |
|
Preference number: 2 (lower is better) Translates to: DTDSRLWNDRLLQNKLNQTLSRQ*CAVSHL Trigger: GAGATGGGAGACAGCACAGCATTGTCTGCTCAGCGT...CTGGTTCAGTTTGTTCTGTAATAACCTGTCATTCCATAGCCGACTATCAGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAACAAACTGAACCAGAGAGAACCTCTGGTCGTCTGAGACATTTGTTATGCTTGACCCGGCAGAAGTaGCAACAGAACAGTGGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: TEQTEPERTSGRLRHLLCLTRQK*QQNSGD Trigger: ATCACCACTGTTCTGTTGGCACTTCTGCCGGGTCAA...GCATAACAAATGTCTCAGACGACCAGAGGTTCTCTCTGGTTCAGTTTGTTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR-3UTR CCA 90 bp | ACTAGTGTTTTGTCTGCATGCATGTTTGTGCCCAGAAGGAGGTGTTGGATCCTATGTGAGCCATCATGTTaGTGCTGGAAATCACTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: TSVLSACMFVPRRRCWILCEPSC*CWKSLW Trigger: CCAGAGTGATTTCCAGCACCAACATGATGGCTCACA...TAGGATCCAACACCTCCTTCTGGGCACAAACATGCATGCAGACAAAACACTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCGGCTATGGAATGACAGGTTATTACAGAACAAACTGAACCAGAGAGAACCTCCCAGGGTCCAGCTCTaGACTTACACTGCTTTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: SRLWNDRLLQNKLNQREPPRVQL*TYTAFD Trigger: ATCAAAAGCAGTGTAAGTTCAGAGCTGGACCCTGGG...AGGTTCTCTCTGGTTCAGTTTGTTCTGTAATAACCTGTCATTCCATAGCCGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR-3UTR CCA 90 bp | AGTCGGCTATGGAATGACAGGTTATTACAGAACAAACTGAACCAGAGAGAACCTAATGGGCATGGGTCATaGGTCAGACAAGGGCTACAA | + |
|
Preference number: 2 (lower is better) Translates to: SRLWNDRLLQNKLNQREPNGHGS*VRQGLQ Trigger: TTGTAGCCCTTGTCTGACCCATGACCCATGCCCATT...AGGTTCTCTCTGGTTCAGTTTGTTCTGTAATAACCTGTCATTCCATAGCCGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR-3UTR GCA 90 bp | GACACTGATAGTCGGCTATGGAATGACAGGTTATTACAGAACAAACTGAACCAGTTACAGCCACCTGTTTaGAGTTCTCCTCTGAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: DTDSRLWNDRLLQNKLNQLQPPV*SSPLRE Trigger: CTCTCTCAGAGGAGAACTGCAAACAGGTGGCTGTAA...CTGGTTCAGTTTGTTCTGTAATAACCTGTCATTCCATAGCCGACTATCAGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTACTAGTGTTTTGTCTGCATGCATGTTTGTGCCCAGAAGGAGGTGTTGGATGCTGGAAATCACTCTaGTCTTCTGTAAAAGCAACA | + |
|
Preference number: 2 (lower is better) Translates to: CVLVFCLHACLCPEGGVGCWKSL*SSVKAT Trigger: TGTTGCTTTTACAGAAGACCAGAGTGATTTCCAGCA...TCCAACACCTCCTTCTGGGCACAAACATGCATGCAGACAAAACACTAGTACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| 3UTR-3UTR GCA 90 bp | GACACTGATAGTCGGCTATGGAATGACAGGTTATTACAGAACAAACTGAACCAGCTGAGACATTTGTTATaGATGACTCACTTTCCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: DTDSRLWNDRLLQNKLNQLRHLL*MTHFPS Trigger: AGAGGGAAAGTGAGTCATGCATAACAAATGTCTCAG...CTGGTTCAGTTTGTTCTGTAATAACCTGTCATTCCATAGCCGACTATCAGTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR CCA 72 bp | CGGCCCTCAGCTGCTTCCAGACTAGCCCTCAGAAGTTaGAATGGGCATGGGTCATGGGTCAGACAAGGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RPSAASRLALRS*NGHGSWVRQGL Trigger: TAGCCCTTGTCTGACCCATGACCCATGCCCATTCCAACTTCTGAGGGCTAGTCTGGAAGCAGCTGAGGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR TCA 72 bp | AATGGGCATGGGTCATGGGTCAGACAAGGGCTACAATaGAGAAGAAACGGAGCTGGGAGCCGGGCACTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: NGHGSWVRQGLQ*RRNGAGSRALF Trigger: GAACAGTGCCCGGCTCCCAGCTCCGTTTCTTCTTCATTGTAGCCCTTGTCTGACCCATGACCCATGCCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR TCA 72 bp | TCACAGCCCATGGGTCTCTGTCCCTGTAACCTCTATTaGTCTCACTCGGCCCTCAGCTGCTTCCAGACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SQPMGLCPCNLY*SHSALSCFQTS Trigger: GCTAGTCTGGAAGCAGCTGAGGGCCGAGTGAGATCAATAGAGGTTACAGGGACAGAGACCCATGGGCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR CCA 72 bp | CTCAGCTGCTTCCAGACTAGCCCTCAGAAGTTGGAATaGGCATGGGTCATGGGTCAGACAAGGGCTACAATG | + |
|
Preference number: 3 (lower is better) Translates to: LSCFQTSPQKLE*AWVMGQTRATM Trigger: CATTGTAGCCCTTGTCTGACCCATGACCCATGCCCATTCCAACTTCTGAGGGCTAGTCTGGAAGCAGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR TCA 72 bp | AGTGGTGATTACAGCCACCTGTTTGCAGTTCTCCTCTaGGAGAGTCACAGCCCATGGGTCTCTGTCCCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SGDYSHLFAVLL*ESHSPWVSVPV Trigger: TACAGGGACAGAGACCCATGGGCTGTGACTCTCTCAGAGGAGAACTGCAAACAGGTGGCTGTAATCACCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR GCA 72 bp | CATATGTGCCCAAAGGCAAGGAAGACAGCAGTCCAGTaGCATGGGAATTCAGGGCATGAAGAGCTGACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HMCPKARKTAVQ*HGNSGHEELTS Trigger: GCTTGTCAGCTCTTCATGCCCTGAATTCCCATGGCACTGGACTGCTGTCTTCCTTGCCTTTGGGCACATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR GCA 72 bp | CACACTTCCATTCCTGTCTCTGGATGGGGACATATGTaGCCAAAGGCAAGGAAGACAGCAGTCCAGTGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: HTSIPVSGWGHM*PKARKTAVQCH Trigger: ATGGCACTGGACTGCTGTCTTCCTTGCCTTTGGGCACATATGTCCCCATCCAGAGACAGGAATGGAAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR TCA 72 bp | CTCATTGACCCGGCAGAAGTGCCAACAGAACAGTGGTaGTTACAGCCACCTGTTTGCAGTTCTCCTCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LIDPAEVPTEQW*LQPPVCSSPLR Trigger: TCTCAGAGGAGAACTGCAAACAGGTGGCTGTAATCACCACTGTTCTGTTGGCACTTCTGCCGGGTCAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR TCA 72 bp | TGTTGGATCCTATGTAACCGGAGTCCCGGACAGTTGTaGGCCATCATGTTGGTGCTGGAAATCACTCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: CWILCNRSPGQL*AIMLVLEITLV Trigger: GACCAGAGTGATTTCCAGCACCAACATGATGGCTCACAACTGTCCGGGACTCCGGTTACATAGGATCCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| 3UTR CCA 72 bp | TGTACTGGAGGACACACTTCCATTCCTGTCTCTGGATaGGGACATATGTGCCCAAAGGCAAGGAAGACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CTGGHTSIPVSG*GHMCPKARKTA Trigger: TGCTGTCTTCCTTGCCTTTGGGCACATATGTCCCCATCCAGAGACAGGAATGGAAGTGTGTCCTCCAGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR TCA 72 bp | AGACAATGCTGTGCTGTCTCCCATCTCTTCAGGGTCTaGAAAAGCCTGTCTAAACAGATGGGTCTCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RQCCAVSHLFRV*KSLSKQMGLLP Trigger: TGGGAGGAGACCCATCTGTTTAGACAGGCTTTTTCAGACCCTGAAGAGATGGGAGACAGCACAGCATTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR TCA 72 bp | CAGTCCAGTGCCATGGGAATTCAGGGCATGAAGAGCTaGCAAGCAATTGTAGCTTCAGTGCCTGGGAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: QSSAMGIQGMKS*QAIVASVPGKC Trigger: ACATTTCCCAGGCACTGAAGCTACAATTGCTTGTCAGCTCTTCATGCCCTGAATTCCCATGGCACTGGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR CCA 72 bp | CTAAGAATGGAGACTTTAAAACAACACTGTACACACTaGGCAAGGGAGACAAATGGCTGTCGGGGCAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: LRMETLKQHCTH*ARETNGCRGRT Trigger: GGTCCTGCCCCGACAGCCATTTGTCTCCCTTGCCCAGTGTGTACAGTGTTGTTTTAAAGTCTCCATTCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR CCA 72 bp | GTAACCGGAGTCCCGGACAGTTGTGAGCCATCATGTTaGTGCTGGAAATCACTCTGGTCTTCTGTAAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VTGVPDSCEPSC*CWKSLWSSVKA Trigger: TGCTTTTACAGAAGACCAGAGTGATTTCCAGCACCAACATGATGGCTCACAACTGTCCGGGACTCCGGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| 3UTR-3UTR CAA 90 bp | GTACTGGAGGACACACTTCCATTCCTGTCTCTGGATGGGGACATATGTGCCCAAGGTCGTCTGAGACATTaGTTATGCATGACTCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: VLEDTLPFLSLDGDICAQGRLRH*LCMTHF Trigger: AAAGTGAGTCATGCATAACAAATGTCTCAGACGACC...TTGGGCACATATGTCCCCATCCAGAGACAGGAATGGAAGTGTGTCCTCCAGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR GCA 72 bp | CCAGAGAGAACCTCTGGTCGTCTGAGACATTTGTTATaGATGACTCACTTTCCCTCTACTGACGGAAGGATA | + |
|
Preference number: 3 (lower is better) Translates to: PERTSGRLRHLL*MTHFPSTDGRI Trigger: TATCCTTCCGTCAGTAGAGGGAAAGTGAGTCATGCATAACAAATGTCTCAGACGACCAGAGGTTCTCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR TCA 72 bp | GTCGGCTATGGAATGACAGGTTATTACAGAACAAACTaGACCAGAGAGAACCTCTGGTCGTCTGAGACATTT | + |
|
Preference number: 3 (lower is better) Translates to: VGYGMTGYYRTN*TRENLWSSETF Trigger: AAATGTCTCAGACGACCAGAGGTTCTCTCTGGTTCAGTTTGTTCTGTAATAACCTGTCATTCCATAGCCGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR TCA 72 bp | GTGACCCAGGGTCCAGCTCTGAACTTACACTGCTTTTaGTCAATGTTTAATATAATGGTTGATTCCATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VTQGPALNLHCF*SMFNIMVDSIS Trigger: GCTTATGGAATCAACCATTATATTAAACATTGATCAAAAGCAGTGTAAGTTCAGAGCTGGACCCTGGGTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR TCA 72 bp | AAGGGGACACAAATGAACACCTTAGTTATTCTAGCATaGAAGAGAGTACTTGGAACCAACAATTTTAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: KGTQMNTLVILA*KRVLGTNNFRF Trigger: AAATCTAAAATTGTTGGTTCCAAGTACTCTCTTTCATGCTAGAATAACTAAGGTGTTCATTTGTGTCCCCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR TCA 90 bp | GTACTGGAGGACACACTTCCATTCCTGTCTCTGGATGGGGACATATGTGCCCAAGCTGCAGGTCAGCTATaGGTGTCACCAGCAACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VLEDTLPFLSLDGDICAQAAGQL*VSPATR Trigger: GCGGGTTGCTGGTGACACTCATAGCTGACCTGCAGC...TTGGGCACATATGTCCCCATCCAGAGACAGGAATGGAAGTGTGTCCTCCAGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGGAGCCGGGCACTGTTCCCACCTAGGAGGCAGCAGGCAGAGAAGCAACAGTTTCAGGTTCTCTaGCTTGCTGATATACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GAGSRALFPPRRQQAEKQQFQVL*LADILG Trigger: ACCAAGTATATCAGCAAGCCAGAGAACCTGAAACTG...TTGCTTCTCTGCCTGCTGCCTCCTAGGTGGGAACAGTGCCCGGCTCCCAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR GCA 90 bp | GAGACTTTAAAACAACACTGTACACACTGGGCAAGGGAGACAAATGGCTGTCGGCGCCAGCTGAGCCACTaGTTCTGTAGGGGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETLKQHCTHWARETNGCRRQLSH*FCRGLL Trigger: AAGGAGCCCCCTACAGAAGCAGTGGCTCAGCTGGCG...CCGACAGCCATTTGTCTCCCTTGCCCAGTGTGTACAGTGTTGTTTTAAAGTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| 3UTR CAA 72 bp | AGTGCCAACAGAACAGTGGTGATTACAGCCACCTGTTaGCAGTTCTCCTCTGAGAGAGTCACAGCCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SANRTVVITATC*QFSSERVTAHG Trigger: CCCATGGGCTGTGACTCTCTCAGAGGAGAACTGCAAACAGGTGGCTGTAATCACCACTGTTCTGTTGGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR TCA 90 bp | AGTGTTTTGTCTGCATGCATGTTTGTGCCCAGAAGGAGGTGTTGGATCCTATGTGCTGCAGGTCAGCTATaGGTGTCACCAGCAACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SVLSACMFVPRRRCWILCAAGQL*VSPATR Trigger: GCGGGTTGCTGGTGACACTCATAGCTGACCTGCAGC...ACATAGGATCCAACACCTCCTTCTGGGCACAAACATGCATGCAGACAAAACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS-3UTR GCA 90 bp | GACAGTTGTGAGCCATCATGTTGGTGCTGGAAATCACTCTGGTCTTCTGTAAAACGCCAGCTGAGCCACTaGTTCTGTAGGGGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DSCEPSCWCWKSLWSSVKRQLSH*FCRGLL Trigger: AAGGAGCCCCCTACAGAAGCAGTGGCTCAGCTGGCG...TTTTACAGAAGACCAGAGTGATTTCCAGCACCAACATGATGGCTCACAACTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS-3UTR CCA 90 bp | AGTCGGCTATGGAATGACAGGTTATTACAGAACAAACTGAACCAGAGAGAACCTATAGGCTGCGTTTTGTaGGGGCTGGCCACAAACACC | + |
|
Preference number: 4 (lower is better) Translates to: SRLWNDRLLQNKLNQREPIGCVL*GLATNT Trigger: GGTGTTTGTGGCCAGCCCCCACAAAACGCAGCCTAT...AGGTTCTCTCTGGTTCAGTTTGTTCTGTAATAACCTGTCATTCCATAGCCGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR GCA 90 bp | TACCTCAGTCACTGCATCTCAGACTCTGTAGCTTTCTGTCCAGAAAGTACACAGTTCTCGTCAGCAAACTaGTCGTCGTCTGTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YLSHCISDSVAFCPESTQFSSAN*SSSVLS Trigger: AGAAAGGACAGACGACGAGCAGTTTGCTGACGAGAA...CTGTGTACTTTCTGGACAGAAAGCTACAGAGTCTGAGATGCAGTGACTGAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR GCA 90 bp | ACAGAACAAACTGAACCAGAGAGAACCTCTGGTCGTCTGAGACATTTGTTATGCTCAAAGTCTATGAGCTaGAGGTCAGCTATGAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TEQTEPERTSGRLRHLLCSKSMS*RSAMSV Trigger: GACACTCATAGCTGACCTGCAGCTCATAGACTTTGA...GCATAACAAATGTCTCAGACGACCAGAGGTTCTCTCTGGTTCAGTTTGTTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CCA 90 bp | ACTAGTGTTTTGTCTGCATGCATGTTTGTGCCCAGAAGGAGGTGTTGGATCCTAGATGATTTTGGCAAGTaGCTCATGTCGAATACACTC | + |
|
Preference number: 4 (lower is better) Translates to: TSVLSACMFVPRRRCWILDDFGK*LMSNTL Trigger: GAGTGTATTCGACATGAGCCACTTGCCAAAATCATC...TAGGATCCAACACCTCCTTCTGGGCACAAACATGCATGCAGACAAAACACTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| 3UTR CAA 72 bp | ATAGCAACAGCTATTAGTGAAATATCCTCACACTCATaGACCCGGCAGAAGTGCCAACAGAACAGTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IATAISEISSHS*TRQKCQQNSGD Trigger: ATCACCACTGTTCTGTTGGCACTTCTGCCGGGTCAATGAGTGTGAGGATATTTCACTAATAGCTGTTGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CCA 90 bp | GACACTGATAGTCGGCTATGGAATGACAGGTTATTACAGAACAAACTGAACCAGGATGATTTTGGCAAGTaGCTCATGTCGAATACACTC | + |
|
Preference number: 4 (lower is better) Translates to: DTDSRLWNDRLLQNKLNQDDFGK*LMSNTL Trigger: GAGTGTATTCGACATGAGCCACTTGCCAAAATCATC...CTGGTTCAGTTTGTTCTGTAATAACCTGTCATTCCATAGCCGACTATCAGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CCA 90 bp | TTAATGTGTACTAGTGTTTTGTCTGCATGCATGTTTGTGCCCAGAAGGAGGTGTCAGTTTCAGGTTCTCTaGCTTGCTGATATACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LMCTSVLSACMFVPRRRCQFQVL*LADILG Trigger: ACCAAGTATATCAGCAAGCCAGAGAACCTGAAACTG...ACACCTCCTTCTGGGCACAAACATGCATGCAGACAAAACACTAGTACACATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGACATTTGTTATGCATGACTCACTTTCCCTCTACTGACGGAAGGATAACACTTCGAATTGGATGTTaGGACTTTTGTCTCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRHLLCMTHFPSTDGRITLRIGC*DFCLEA Trigger: TGCTTCGAGACAAAAGTCCCAACATCCAATTCGAAG...TGTTATCCTTCCGTCAGTAGAGGGAAAGTGAGTCATGCATAACAAATGTCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR GCA 90 bp | ACAGAACAAACTGAACCAGAGAGAACCTCTGGTCGTCTGAGACATTTGTTATGCATTTCCTTCATTGCTTaGAGAGATTTTGACACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TEQTEPERTSGRLRHLLCISFIA*RDFDTS Trigger: AGAGGTGTCAAAATCTCTGCAAGCAATGAAGGAAAT...GCATAACAAATGTCTCAGACGACCAGAGGTTCTCTCTGGTTCAGTTTGTTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR GCA 90 bp | TGTGAGCCATCATGTTGGTGCTGGAAATCACTCTGGTCTTCTGTAAAAGCAACAATTTCCTTCATTGCTTaGAGAGATTTTGACACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CEPSCWCWKSLWSSVKATISFIA*RDFDTS Trigger: AGAGGTGTCAAAATCTCTGCAAGCAATGAAGGAAAT...TGTTGCTTTTACAGAAGACCAGAGTGATTTCCAGCACCAACATGATGGCTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGCCTTCCTAAGAATGGAGACTTTAAAACAACACTGTACACACTGGGCAAACACCTTAAAGACATaGAAGGCTTCGAATTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SKAFLRMETLKQHCTHWANTLKT*KASNWM Trigger: CATCCAATTCGAAGCCTTCCATGTCTTTAAGGTGTT...TGCCCAGTGTGTACAGTGTTGTTTTAAAGTCTCCATTCTTAGGAAGGCTTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CCA 90 bp | TGTGAGCCATCATGTTGGTGCTGGAAATCACTCTGGTCTTCTGTAAAAGCAACAGAATTCTTAAAGACATaGAAGGCTTCGAATTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CEPSCWCWKSLWSSVKATEFLKT*KASNWM Trigger: CATCCAATTCGAAGCCTTCCATGTCTTTAAGAATTC...TGTTGCTTTTACAGAAGACCAGAGTGATTTCCAGCACCAACATGATGGCTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS GCA 90 bp | CACCAGCAACCCGCTGCTGTAGAGCTCCTGCGCCAGCTGAGCCACTaGTTCTGTAGGGGGCTCCTTGTCGTTCGTTCCACACAGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: HQQPAAVELLRQLSH*FCRGLLVVRSTQNF Trigger: GAAATTCTGTGTGGAACGAACGACAAGGAGCCCCCTACAGAAGCAGTGGCTCAGCTGGCGCAGGAGCTCTACAGCAGCGGGTTGCTGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022553.6 ENSMUST00000225595.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGGGAGCCGGGCACTGTTCCCACCTAGGAGGCAGCAGGCAGAGAAGCAAGTCATAATGGTGAAATaGTGGCGGTCCAGGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GAGSRALFPPRRQQAEKQVIMVK*WRSRIS Trigger: GCTGATCCTGGACCGCCACAATTTCACCATTATGAC...TTGCTTCTCTGCCTGCTGCCTCCTAGGTGGGAACAGTGCCCGGCTCCCAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGGGAGCCGGGCACTGTTCCCACCTAGGAGGCAGCAGGCAGAGAAGCAAACCTCTTCTGAAGCCTaGTCTGTCTTTTTGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GAGSRALFPPRRQQAEKQTSSEA*SVFLSC Trigger: GCAAGACAAAAAGACAGACAAGGCTTCAGAAGAGGT...TTGCTTCTCTGCCTGCTGCCTCCTAGGTGGGAACAGTGCCCGGCTCCCAGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGGGAGCCGGGCACTGTTCCCACCTAGGAGGCAGCAGGCAGAGAAGCAATTGCTTGCAGAGATTTaGACACCTCTTCTGAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GAGSRALFPPRRQQAEKQLLAEI*TPLLKP Trigger: AGGCTTCAGAAGAGGTGTCAAAATCTCTGCAAGCAA...TTGCTTCTCTGCCTGCTGCCTCCTAGGTGGGAACAGTGCCCGGCTCCCAGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CAA 90 bp | GTACTGGAGGACACACTTCCATTCCTGTCTCTGGATGGGGACATATGTGCCCAAACGATAGGCTGCGTTTaGTGGGGGCTGGCCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VLEDTLPFLSLDGDICAQTIGCV*WGLATN Trigger: GTTTGTGGCCAGCCCCCACAAAACGCAGCCTATCGT...TTGGGCACATATGTCCCCATCCAGAGACAGGAATGGAAGTGTGTCCTCCAGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CAA 90 bp | CACGCTGAGCAGACAATGCTGTGCTGTCTCCCATCTCTTCAGGGTCTGAAAAAGTCCAAAATGGCCAGGTaGTCTTTCAGAATTTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: HAEQTMLCCLPSLQGLKKSKMAR*SFRILT Trigger: TGTCAAAATTCTGAAAGACAACCTGGCCATTTTGGA...CTTTTTCAGACCCTGAAGAGATGGGAGACAGCACAGCATTGTCTGCTCAGCGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CAA 90 bp | GAGTCCCGGACAGTTGTGAGCCATCATGTTGGTGCTGGAAATCACTCTGGTCTTTCCAAAATGGCCAGGTaGTCTTTCAGAATTTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: ESRTVVSHHVGAGNHSGLSKMAR*SFRILT Trigger: TGTCAAAATTCTGAAAGACAACCTGGCCATTTTGGA...AAGACCAGAGTGATTTCCAGCACCAACATGATGGCTCACAACTGTCCGGGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS-3UTR CAA 90 bp | GACAGTTGTGAGCCATCATGTTGGTGCTGGAAATCACTCTGGTCTTCTGTAAAAGTCATAATGGTGAAATaGTGGCGGTCCAGGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DSCEPSCWCWKSLWSSVKVIMVK*WRSRIS Trigger: GCTGATCCTGGACCGCCACAATTTCACCATTATGAC...TTTTACAGAAGACCAGAGTGATTTCCAGCACCAACATGATGGCTCACAACTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTACTAGTGTTTTGTCTGCATGCATGTTTGTGCCCAGAAGGAGGTGTTGGAACCTCTTCTGAAGCCTaGTCTGTCTTTTTGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CVLVFCLHACLCPEGGVGTSSEA*SVFLSC Trigger: GCAAGACAAAAAGACAGACAAGGCTTCAGAAGAGGT...TCCAACACCTCCTTCTGGGCACAAACATGCATGCAGACAAAACACTAGTACACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS-3UTR CAA 90 bp | GGTCGTCTGAGACATTTGTTATGCATGACTCACTTTCCCTCTACTGACGGAAGGTTCAGGTTCTCTGGCTaGCTGATATACTTGGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: GRLRHLLCMTHFPSTDGRFRFSG*LIYLVI Trigger: TATGACCAAGTATATCAGCAAGCCAGAGAACCTGAA...CCTTCCGTCAGTAGAGGGAAAGTGAGTCATGCATAACAAATGTCTCAGACGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CAA 90 bp | AGTGTTTTGTCTGCATGCATGTTTGTGCCCAGAAGGAGGTGTTGGATCCTATGTATGGAAGGCTTCGAATaGGATGTTGGGACTTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SVLSACMFVPRRRCWILCMEGFE*DVGTFV Trigger: GACAAAAGTCCCAACATCCAATTCGAAGCCTTCCAT...ACATAGGATCCAACACCTCCTTCTGGGCACAAACATGCATGCAGACAAAACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS CCA 90 bp | AGGTTCTCTGGCTTGCTGATATACTTGGTCATAATGGTGAAATTGTaGCGGTCCAGGATCAGCTCACCTAGCAACTTTAAAGATTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RFSGLLIYLVIMVKL*RSRISSPSNFKDCL Trigger: GAGACAATCTTTAAAGTTGCTAGGTGAGCTGATCCTGGACCGCCACAATTTCACCATTATGACCAAGTATATCAGCAAGCCAGAGAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022553.6 ENSMUST00000225595.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTACTAGTGTTTTGTCTGCATGCATGTTTGTGCCCAGAAGGAGGTGTTGGATTCAGGTTCTCTGGCTaGCTGATATACTTGGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: CVLVFCLHACLCPEGGVGFRFSG*LIYLVI Trigger: TATGACCAAGTATATCAGCAAGCCAGAGAACCTGAA...TCCAACACCTCCTTCTGGGCACAAACATGCATGCAGACAAAACACTAGTACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS-3UTR CAA 90 bp | GACACTGATAGTCGGCTATGGAATGACAGGTTATTACAGAACAAACTGAACCAGGCTTCGAATTGGATGTaGGGACTTTTGTCTCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: DTDSRLWNDRLLQNKLNQASNWM*GLLSRS Trigger: GCTTCGAGACAAAAGTCCCAACATCCAATTCGAAGC...CTGGTTCAGTTTGTTCTGTAATAACCTGTCATTCCATAGCCGACTATCAGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CAA 90 bp | TTAATGTGTACTAGTGTTTTGTCTGCATGCATGTTTGTGCCCAGAAGGAGGTGTGCTTCGAATTGGATGTaGGGACTTTTGTCTCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LMCTSVLSACMFVPRRRCASNWM*GLLSRS Trigger: GCTTCGAGACAAAAGTCCCAACATCCAATTCGAAGC...ACACCTCCTTCTGGGCACAAACATGCATGCAGACAAAACACTAGTACACATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS-3UTR CAA 90 bp | GACAGTTGTGAGCCATCATGTTGGTGCTGGAAATCACTCTGGTCTTCTGTAAAAGAAAATAGGATGATTTaGGCAAGTGGCTCATGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: DSCEPSCWCWKSLWSSVKENRMI*ASGSCR Trigger: TCGACATGAGCCACTTGCCAAAATCATCCTATTTTC...TTTTACAGAAGACCAGAGTGATTTCCAGCACCAACATGATGGCTCACAACTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTACTAGTGTTTTGTCTGCATGCATGTTTGTGCCCAGAAGGAGGTGTTGGAGGCTTGCTGATATACTaGGTCATAATGGTGAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: CVLVFCLHACLCPEGGVGGLLIY*VIMVKL Trigger: CAATTTCACCATTATGACCAAGTATATCAGCAAGCC...TCCAACACCTCCTTCTGGGCACAAACATGCATGCAGACAAAACACTAGTACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGCCTTCCTAAGAATGGAGACTTTAAAACAACACTGTACACACTGGGCAATGGAAGGCTTCGAATaGGATGTTGGGACTTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SKAFLRMETLKQHCTHWAMEGFE*DVGTFV Trigger: GACAAAAGTCCCAACATCCAATTCGAAGCCTTCCAT...TGCCCAGTGTGTACAGTGTTGTTTTAAAGTCTCCATTCTTAGGAAGGCTTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CAA 90 bp | AGTGTTTTGTCTGCATGCATGTTTGTGCCCAGAAGGAGGTGTTGGATCCTATGTACAGAATTTCCTTCATaGCTTGCAGAGATTTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SVLSACMFVPRRRCWILCTEFPS*LAEILT Trigger: TGTCAAAATCTCTGCAAGCAATGAAGGAAATTCTGT...ACATAGGATCCAACACCTCCTTCTGGGCACAAACATGCATGCAGACAAAACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS-3UTR CAA 90 bp | GACACTGATAGTCGGCTATGGAATGACAGGTTATTACAGAACAAACTGAACCAGCTTCTCAGGATGTTGTaGAATATCTGGGTCACATCT | + |
|
Preference number: 5 (lower is better) Translates to: DTDSRLWNDRLLQNKLNQLLRML*NIWVTS Trigger: AGATGTGACCCAGATATTCAACAACATCCTGAGAAG...CTGGTTCAGTTTGTTCTGTAATAACCTGTCATTCCATAGCCGACTATCAGTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CAA 90 bp | TTAATGTGTACTAGTGTTTTGTCTGCATGCATGTTTGTGCCCAGAAGGAGGTGTCTTCTCAGGATGTTGTaGAATATCTGGGTCACATCT | + |
|
Preference number: 5 (lower is better) Translates to: LMCTSVLSACMFVPRRRCLLRML*NIWVTS Trigger: AGATGTGACCCAGATATTCAACAACATCCTGAGAAG...ACACCTCCTTCTGGGCACAAACATGCATGCAGACAAAACACTAGTACACATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS-3UTR CAA 90 bp | AGTCGGCTATGGAATGACAGGTTATTACAGAACAAACTGAACCAGAGAGAACCTGAAAATAGGATGATTTaGGCAAGTGGCTCATGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SRLWNDRLLQNKLNQREPENRMI*ASGSCR Trigger: TCGACATGAGCCACTTGCCAAAATCATCCTATTTTC...AGGTTCTCTCTGGTTCAGTTTGTTCTGTAATAACCTGTCATTCCATAGCCGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGCCTTCCTAAGAATGGAGACTTTAAAACAACACTGTACACACTGGGCACACATAGTTCTCAGATaGCAGCAGTTTCTCATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SKAFLRMETLKQHCTHWAHIVLR*QQFLIV Trigger: GACTATGAGAAACTGCTGCAATCTGAGAACTATGTG...TGCCCAGTGTGTACAGTGTTGTTTTAAAGTCTCCATTCTTAGGAAGGCTTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CAA 90 bp | TTAATGTGTACTAGTGTTTTGTCTGCATGCATGTTTGTGCCCAGAAGGAGGTGTCACATAGTTCTCAGATaGCAGCAGTTTCTCATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LMCTSVLSACMFVPRRRCHIVLR*QQFLIV Trigger: GACTATGAGAAACTGCTGCAATCTGAGAACTATGTG...ACACCTCCTTCTGGGCACAAACATGCATGCAGACAAAACACTAGTACACATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225595.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGACATTTGTTATGCATGACTCACTTTCCCTCTACTGACGGAAGGATAACAGGCTTGCTGATATACTaGGTCATAATGGTGAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: LRHLLCMTHFPSTDGRITGLLIY*VIMVKL Trigger: CAATTTCACCATTATGACCAAGTATATCAGCAAGCC...TGTTATCCTTCCGTCAGTAGAGGGAAAGTGAGTCATGCATAACAAATGTCTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS-3UTR CAA 90 bp | CTGAGACATTTGTTATGCATGACTCACTTTCCCTCTACTGACGGAAGGATAACAACAGAATTTCCTTCATaGCTTGCAGAGATTTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LRHLLCMTHFPSTDGRITTEFPS*LAEILT Trigger: TGTCAAAATCTCTGCAAGCAATGAAGGAAATTCTGT...TGTTATCCTTCCGTCAGTAGAGGGAAAGTGAGTCATGCATAACAAATGTCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022553.6 |
||
| CDS TCA 90 bp | ATATCAAAGGTGGACAGCTCAACATACTTGAAGAAATCTCTGAACTaGTTAGAAAATAGGATGATTTTGGCAAGTGGCTCATGTCGAATA | + |
|
Preference number: 5 (lower is better) Translates to: ISKVDSSTYLKKSLN*LENRMILASGSCRI Trigger: TATTCGACATGAGCCACTTGCCAAAATCATCCTATTTTCTAATCAGTTCAGAGATTTCTTCAAGTATGTTGAGCTGTCCACCTTTGATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022553.6 ENSMUST00000225595.2 |
||
| CDS GCA 72 bp | CCCGCTGCTGTAGAGCTCCTGCGCCAGCTGAGCCACTaGTTCTGTAGGGGGCTCCTTGTCGTTCGTTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: PAAVELLRQLSH*FCRGLLVVRST Trigger: TGTGGAACGAACGACAAGGAGCCCCCTACAGAAGCAGTGGCTCAGCTGGCGCAGGAGCTCTACAGCAGCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022553.6 ENSMUST00000223678.2 ENSMUST00000225595.2 |
||
| CDS CCA 72 bp | GGCTTGCTGATATACTTGGTCATAATGGTGAAATTGTaGCGGTCCAGGATCAGCTCACCTAGCAACTTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: GLLIYLVIMVKL*RSRISSPSNFK Trigger: TTTAAAGTTGCTAGGTGAGCTGATCCTGGACCGCCACAATTTCACCATTATGACCAAGTATATCAGCAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022553.6 ENSMUST00000225595.2 |
||
| CDS CAA 72 bp | ATCATCAGTTTCAGGTTCTCTGGCTTGCTGATATACTaGGTCATAATGGTGAAATTGTGGCGGTCCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: IISFRFSGLLIY*VIMVKLWRSRI Trigger: GATCCTGGACCGCCACAATTTCACCATTATGACCAAGTATATCAGCAAGCCAGAGAACCTGAAACTGATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022553.6 ENSMUST00000225595.2 |
||
| CDS GCA 72 bp | TTGTCGTTCGTTCCACACAGAATTTCCTTCATTGCTTaGAGAGATTTTGACACCTCTTCTGAAGCCTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSFVPHRISFIA*RDFDTSSEALS Trigger: AGACAAGGCTTCAGAAGAGGTGTCAAAATCTCTGCAAGCAATGAAGGAAATTCTGTGTGGAACGAACGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022553.6 ENSMUST00000223678.2 ENSMUST00000225595.2 |
||