Pregenerated sensors for C9ORF72 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028300Ensembl transcript IDs: ENSMUST00000084724.10, ENSMUST00000108126.8, ENSMUST00000108127.4
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGACCGAATCTGAAGGACTACGTCTATAAAGGAAGGGCTAACAACTaGTTTCACCTACAGCTCTGCCCTATCAGTGTCTTCTCTCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: RPNLKDYVYKGRANN*FHLQLCPISVFSQE Trigger: TTCTTGAGAGAAGACACTGATAGGGCAGAGCTGTAGGTGAAATCAGTTGTTAGCCCTTCCTTTATAGACGTAGTCCTTCAGATTCGGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| 3UTR-3UTR GCA 90 bp | GTGACACGGGAAACACCAGAGTACAGGCAGAAACCAAAGGAAAGAGGCAAGACGGATACTCAGGGCCCATaGATGACCCCTCGGCATTTC | + |
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Preference number: 2 (lower is better) Translates to: VTRETPEYRQKPKERGKTDTQGP*MTPRHF Trigger: GAAATGCCGAGGGGTCATGCATGGGCCCTGAGTATC...CGTCTTGCCTCTTTCCTTTGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCTATGATGCAGGTGACACGGGAAACACCAGAGTACAGGCAGAAACCAAACTCAGGGCCCATGCATaGCCCCTCGGCATTTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: CSYDAGDTGNTRVQAETKLRAHA*PLGISV Trigger: TACAGAAATGCCGAGGGGTCATGCATGGGCCCTGAG...TTTGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCACCTGCATCATAGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| 3UTR-3UTR GCA 90 bp | ACTGGGTCAGATTTCTCTGCTGTTCCTATGATGCAGGTGACACGGGAAACACCAGATACTCAGGGCCCATaGATGACCCCTCGGCATTTC | + |
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Preference number: 2 (lower is better) Translates to: TGSDFSAVPMMQVTRETPDTQGP*MTPRHF Trigger: GAAATGCCGAGGGGTCATGCATGGGCCCTGAGTATC...TGGTGTTTCCCGTGTCACCTGCATCATAGGAACAGCAGAGAAATCTGACCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| 3UTR-3UTR TCA 90 bp | GTGACACGGGAAACACCAGAGTACAGGCAGAAACCAAAGGAAAGAGGCAAGACGCTGGGCCCTGAAATCTaGCCCTCTGCCAAGAAATTA | + |
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Preference number: 2 (lower is better) Translates to: VTRETPEYRQKPKERGKTLGPEI*PSAKKL Trigger: TAATTTCTTGGCAGAGGGTCAGATTTCAGGGCCCAG...CGTCTTGCCTCTTTCCTTTGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| 3UTR-3UTR TCA 90 bp | TCGCTTACCATGACGGAGTGCCTTGCAGTTAGTTCACAAGCCATCATGGTCAGTGCTAAATCTGGTGGGTaGGGAACGGGGCCCATTTTT | + |
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Preference number: 2 (lower is better) Translates to: SLTMTECLAVSSQAIMVSAKSGG*GTGPIF Trigger: AAAAATGGGCCCCGTTCCTCACCCACCAGATTTAGC...ACTGACCATGATGGCTTGTGAACTAACTGCAAGGCACTCCGTCATGGTAAGCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAGAAACCAAAGGAAAGAGGCAAGACGCTTCCCTGCTCTTCAAAGATCTTAAAGTGACTGGGCCCTaGAATCTGACCCTCTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: QAETKGKRQDASLLFKDLKVTGP*NLTLCQ Trigger: TTGGCAGAGGGTCAGATTTCAGGGCCCAGTCACTTT...AAGATCTTTGAAGAGCAGGGAAGCGTCTTGCCTCTTTCCTTTGGTTTCTGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| 3UTR-3UTR GCA 90 bp | ACTGGGTCAGATTTCTCTGCTGTTCCTATGATGCAGGTGACACGGGAAACACCATTTCACCTACAGCTCTaGCCTATCAGTGTCTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TGSDFSAVPMMQVTRETPFHLQL*PISVFS Trigger: AGAGAAGACACTGATAGGGCAGAGCTGTAGGTGAAA...TGGTGTTTCCCGTGTCACCTGCATCATAGGAACAGCAGAGAAATCTGACCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| 3UTR-3UTR GCA 90 bp | TCGCTTACCATGACGGAGTGCCTTGCAGTTAGTTCACAAGCCATCATGGTCAGTTTTCACCTACAGCTCTaGCCTATCAGTGTCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SLTMTECLAVSSQAIMVSFHLQL*PISVFS Trigger: AGAGAAGACACTGATAGGGCAGAGCTGTAGGTGAAA...ACTGACCATGATGGCTTGTGAACTAACTGCAAGGCACTCCGTCATGGTAAGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| 3UTR-3UTR TCA 90 bp | CTGATTTGTAATGCCAAAGCCACCGTGACCTTTCAGAATAGAAAGCTTTTTCTCAAAGTGACTGGGCCCTaGAATCTGACCCTCTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: LICNAKATVTFQNRKLFLKVTGP*NLTLCQ Trigger: TTGGCAGAGGGTCAGATTTCAGGGCCCAGTCACTTT...GAGAAAAAGCTTTCTATTCTGAAAGGTCACGGTGGCTTTGGCATTACAAATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| 3UTR-3UTR TCA 90 bp | AGATTGGGAAAGGCACAGGAGGTGCGCATTTTAATTCGGCTCAAAAATAATGAAAAGGTCTCCCAAAGATaGAAGAGTGTAGGCCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RLGKAQEVRILIRLKNNEKVSQR*KSVGLA Trigger: AGCCAGGCCTACACTCTTTCATCTTTGGGAGACCTT...TTCATTATTTTTGAGCCGAATTAAAATGCGCACCTCCTGTGCCTTTCCCAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084724.10 |
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| 3UTR-3UTR GCA 90 bp | AGATTGGGAAAGGCACAGGAGGTGCGCATTTTAATTCGGCTCAAAAATAATGAATTTCACCTACAGCTCTaGCCTATCAGTGTCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: RLGKAQEVRILIRLKNNEFHLQL*PISVFS Trigger: AGAGAAGACACTGATAGGGCAGAGCTGTAGGTGAAA...TTCATTATTTTTGAGCCGAATTAAAATGCGCACCTCCTGTGCCTTTCCCAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| 3UTR TCA 72 bp | GCAGGACTCGGGAGGAAGGATGTGCCCACACACTGCTaGGACACTGTAACAGCAGGTGTGACTGTGAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: AGLGRKDVPTHC*DTVTAGVTVKR Trigger: TCTCTTCACAGTCACACCTGCTGTTACAGTGTCTCAGCAGTGTGTGGGCACATCCTTCCTCCCGAGTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| 3UTR GCA 72 bp | CTAGGAGGTGGGACCTACTCGCTTACCATGACGGAGTaGCTTGCAGTTAGTTCACAAGCCATCATGGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LGGGTYSLTMTE*LAVSSQAIMVS Trigger: ACTGACCATGATGGCTTGTGAACTAACTGCAAGGCACTCCGTCATGGTAAGCGAGTAGGTCCCACCTCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| 3UTR TCA 72 bp | AACTTGTCACAGGTCACGATACTCAGGGCCCATGCATaGCCCCTCGGCATTTCTGTACAGACCGAATCTGAA | + |
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Preference number: 3 (lower is better) Translates to: NLSQVTILRAHA*PLGISVQTESE Trigger: TTCAGATTCGGTCTGTACAGAAATGCCGAGGGGTCATGCATGGGCCCTGAGTATCGTGACCTGTGACAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| 3UTR TCA 72 bp | CTGAAGGACTACGTCTATAAAGGAAGGGCTAACAACTaGTTTCACCTACAGCTCTGCCCTATCAGTGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: LKDYVYKGRANN*FHLQLCPISVF Trigger: GAAGACACTGATAGGGCAGAGCTGTAGGTGAAATCAGTTGTTAGCCCTTCCTTTATAGACGTAGTCCTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR TCA 90 bp | GTGACACGGGAAACACCAGAGTACAGGCAGAAACCAAAGGAAAGAGGCAAGACGACAGGTCTGCAGGTGTaGGCTGATGGCATTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: VTRETPEYRQKPKERGKTTGLQV*ADGIEK Trigger: CTTCTCAATGCCATCAGCTCACACCTGCAGACCTGT...CGTCTTGCCTCTTTCCTTTGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR TCA 90 bp | ATGCATGACCCCTCGGCATTTCTGTACAGACCGAATCTGAAGGACTACGTCTATCGCCATGTCCTCTTCTaGAGTTGCCCTCCAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: MHDPSAFLYRPNLKDYVYRHVLF*SCPPEG Trigger: GCCTTCTGGAGGGCAACTTCAGAAGAGGACATGGCG...ATAGACGTAGTCCTTCAGATTCGGTCTGTACAGAAATGCCGAGGGGTCATGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR TCA 90 bp | GGGCAGGAAGTCAACTCACACTTTATCTGTAAAGCTAACGAGGGTTTCAGTGTGCGCCATGTCCTCTTCTaGAGTTGCCCTCCAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: GQEVNSHFICKANEGFSVRHVLF*SCPPEG Trigger: GCCTTCTGGAGGGCAACTTCAGAAGAGGACATGGCG...CACACTGAAACCCTCGTTAGCTTTACAGATAAAGTGTGAGTTGACTTCCTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR TCA 90 bp | CAGGCAGAAACCAAAGGAAAGAGGCAAGACGCTTCCCTGCTCTTCAAAGATCTTCAAGGAAAGTACTCCTaGGAGACAGGCCAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QAETKGKRQDASLLFKDLQGKYS*ETGQAS Trigger: TGAAGCCTGGCCTGTCTCTCAGGAGTACTTTCCTTG...AAGATCTTTGAAGAGCAGGGAAGCGTCTTGCCTCTTTCCTTTGGTTTCTGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR TCA 90 bp | TCGCTTACCATGACGGAGTGCCTTGCAGTTAGTTCACAAGCCATCATGGTCAGTAAGGTCTCCCAAAGATaGAAGAGTGTAGGCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SLTMTECLAVSSQAIMVSKVSQR*KSVGLA Trigger: AGCCAGGCCTACACTCTTTCATCTTTGGGAGACCTT...ACTGACCATGATGGCTTGTGAACTAACTGCAAGGCACTCCGTCATGGTAAGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR GCA 90 bp | GTGACACGGGAAACACCAGAGTACAGGCAGAAACCAAAGGAAAGAGGCAAGACGGGGGCATACATAACTTaGCGGAAGGGTAGGACAAAA | + |
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Preference number: 4 (lower is better) Translates to: VTRETPEYRQKPKERGKTGAYIT*RKGRTK Trigger: TTTTGTCCTACCCTTCCGGCAAGTTATGTATGCCCC...CGTCTTGCCTCTTTCCTTTGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR GCA 90 bp | GTGACACGGGAAACACCAGAGTACAGGCAGAAACCAAAGGAAAGAGGCAAGACGGGCTTTTTCCCCTTCTaGGTATCATCCTCGATGTAC | + |
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Preference number: 4 (lower is better) Translates to: VTRETPEYRQKPKERGKTGFFPF*VSSSMY Trigger: GTACATCGAGGATGATACGCAGAAGGGGAAAAAGCC...CGTCTTGCCTCTTTCCTTTGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR CCA 90 bp | ATGCATGACCCCTCGGCATTTCTGTACAGACCGAATCTGAAGGACTACGTCTATAACAGCAGGAGATGGTaGGGGGCAGATAGTCGACAT | + |
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Preference number: 4 (lower is better) Translates to: MHDPSAFLYRPNLKDYVYNSRRW*GADSRH Trigger: ATGTCGACTATCTGCCCCCCACCATCTCCTGCTGTT...ATAGACGTAGTCCTTCAGATTCGGTCTGTACAGAAATGCCGAGGGGTCATGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
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| CDS-3UTR TCA 90 bp | GGGCAGGAAGTCAACTCACACTTTATCTGTAAAGCTAACGAGGGTTTCAGTGTGACAGGTCTGCAGGTGTaGGCTGATGGCATTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: GQEVNSHFICKANEGFSVTGLQV*ADGIEK Trigger: CTTCTCAATGCCATCAGCTCACACCTGCAGACCTGT...CACACTGAAACCCTCGTTAGCTTTACAGATAAAGTGTGAGTTGACTTCCTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR TCA 90 bp | CTCTGCCCTATCAGTGTCTTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCGCCATGTCCTCTTCTaGAGTTGCCCTCCAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LCPISVFSQELICSQTKFRHVLF*SCPPEG Trigger: GCCTTCTGGAGGGCAACTTCAGAAGAGGACATGGCG...GAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAAGACACTGATAGGGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR GCA 90 bp | GCTGTTCCTATGATGCAGGTGACACGGGAAACACCAGAGTACAGGCAGAAACCAGTGGGATTTCATAGATaGAAGCAGCTCCATTACAGG | + |
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Preference number: 4 (lower is better) Translates to: AVPMMQVTRETPEYRQKPVGFHR*KQLHYR Trigger: CCTGTAATGGAGCTGCTTGCATCTATGAAATCCCAC...TGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCACCTGCATCATAGGAACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR GCA 90 bp | GCTGTTCCTATGATGCAGGTGACACGGGAAACACCAGAGTACAGGCAGAAACCATTACTTTCTCTGCACTaGTGCCAACTACAACGGAAC | + |
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Preference number: 4 (lower is better) Translates to: AVPMMQVTRETPEYRQKPLLSLH*CQLQRN Trigger: GTTCCGTTGTAGTTGGCAGCAGTGCAGAGAAAGTAA...TGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCACCTGCATCATAGGAACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR CCA 90 bp | ACTGGGTCAGATTTCTCTGCTGTTCCTATGATGCAGGTGACACGGGAAACACCAAAGCAATCTCTGTCTTaGCAACAGCAGGAGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: TGSDFSAVPMMQVTRETPKQSLS*QQQEMV Trigger: CACCATCTCCTGCTGTTGCCAAGACAGAGATTGCTT...TGGTGTTTCCCGTGTCACCTGCATCATAGGAACAGCAGAGAAATCTGACCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
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| CDS-3UTR TCA 90 bp | GCTGTTCCTATGATGCAGGTGACACGGGAAACACCAGAGTACAGGCAGAAACCATTATTTCTCCATCACTaGGAAGCACTTGGTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: AVPMMQVTRETPEYRQKPLFLHH*EALGLS Trigger: AGACAGACCAAGTGCTTCTCAGTGATGGAGAAATAA...TGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCACCTGCATCATAGGAACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
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| CDS-3UTR TCA 90 bp | CAGGCAGAAACCAAAGGAAAGAGGCAAGACGCTTCCCTGCTCTTCAAAGATCTTAGAAGAAAGCCTTCGTaGCAGCTGTCACCAATGTCA | + |
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Preference number: 4 (lower is better) Translates to: QAETKGKRQDASLLFKDLRRKPS*QLSPMS Trigger: TGACATTGGTGACAGCTGTCACGAAGGCTTTCTTCT...AAGATCTTTGAAGAGCAGGGAAGCGTCTTGCCTCTTTCCTTTGGTTTCTGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR GCA 90 bp | TGTTCCTATGATGCAGGTGACACGGGAAACACCAGAGTACAGGCAGAAACCAAAGGAGCATTTCCTCTCTaGTGGTGTCAGAAAAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: CSYDAGDTGNTRVQAETKGAFPL*WCQKKA Trigger: TGCCTTTTTCTGACACCAGCAGAGAGGAAATGCTCC...TTTGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCACCTGCATCATAGGAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR GCA 90 bp | CAGGCAGAAACCAAAGGAAAGAGGCAAGACGCTTCCCTGCTCTTCAAAGATCTTTCCTTTAGCAAGCCTTaGACAAAGAGTCCCGATTCG | + |
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Preference number: 4 (lower is better) Translates to: QAETKGKRQDASLLFKDLSFSKP*TKSPDS Trigger: CGAATCGGGACTCTTTGTGCAAGGCTTGCTAAAGGA...AAGATCTTTGAAGAGCAGGGAAGCGTCTTGCCTCTTTCCTTTGGTTTCTGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR GCA 90 bp | CCAAGATTGGGAAAGGCACAGGAGGTGCGCATTTTAATTCGGCTCAAAAATAATACATCCACATCAATGTaGGTGGTGGGGTACGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: PRLGKAQEVRILIRLKNNTSTSM*VVGYGA Trigger: TGCCCCGTACCCCACCACGCACATTGATGTGGATGT...ATTATTTTTGAGCCGAATTAAAATGCGCACCTCCTGTGCCTTTCCCAATCTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR GCA 90 bp | CAGGCAGAAACCAAAGGAAAGAGGCAAGACGCTTCCCTGCTCTTCAAAGATCTTGGCTTTTTCCCCTTCTaGGTATCATCCTCGATGTAC | + |
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Preference number: 4 (lower is better) Translates to: QAETKGKRQDASLLFKDLGFFPF*VSSSMY Trigger: GTACATCGAGGATGATACGCAGAAGGGGAAAAAGCC...AAGATCTTTGAAGAGCAGGGAAGCGTCTTGCCTCTTTCCTTTGGTTTCTGCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR CCA 90 bp | ACTGGGTCAGATTTCTCTGCTGTTCCTATGATGCAGGTGACACGGGAAACACCACACTTGGTCTGTCTTTaGAGCCCAAATATGCCTTAC | + |
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Preference number: 4 (lower is better) Translates to: TGSDFSAVPMMQVTRETPHLVCL*SPNMPY Trigger: GTAAGGCATATTTGGGCTCCAAAGACAGACCAAGTG...TGGTGTTTCCCGTGTCACCTGCATCATAGGAACAGCAGAGAAATCTGACCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
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| CDS-3UTR CCA 90 bp | GGGCAGGAAGTCAACTCACACTTTATCTGTAAAGCTAACGAGGGTTTCAGTGTGACACACTCTGTGAAGTaGGAGGTAGAAGCTCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GQEVNSHFICKANEGFSVTHSVK*EVEAQL Trigger: GAGCTGAGCTTCTACCTCCCACTTCACAGAGTGTGT...CACACTGAAACCCTCGTTAGCTTTACAGATAAAGTGTGAGTTGACTTCCTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
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| CDS-3UTR CCA 90 bp | GTGACACGGGAAACACCAGAGTACAGGCAGAAACCAAAGGAAAGAGGCAAGACGTCTTCAGGAACACTGTaGGATTTCATAGATGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: VTRETPEYRQKPKERGKTSSGTL*DFIDAS Trigger: GCTTGCATCTATGAAATCCCACAGTGTTCCTGAAGA...CGTCTTGCCTCTTTCCTTTGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR GCA 90 bp | ACTGGGTCAGATTTCTCTGCTGTTCCTATGATGCAGGTGACACGGGAAACACCACTTCCATCCTCTCTGTaGCTTCCAAGACAATTTTCT | + |
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Preference number: 4 (lower is better) Translates to: TGSDFSAVPMMQVTRETPLPSSL*LPRQFS Trigger: AGAAAATTGTCTTGGAAGGCACAGAGAGGATGGAAG...TGGTGTTTCCCGTGTCACCTGCATCATAGGAACAGCAGAGAAATCTGACCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
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| CDS-3UTR GCA 90 bp | GCTGTTCCTATGATGCAGGTGACACGGGAAACACCAGAGTACAGGCAGAAACCACTTATTTACTTTCTCTaGACTGCTGCCAACTACAAC | + |
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Preference number: 4 (lower is better) Translates to: AVPMMQVTRETPEYRQKPLIYFL*TAANYN Trigger: GTTGTAGTTGGCAGCAGTGCAGAGAAAGTAAATAAG...TGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCACCTGCATCATAGGAACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR GCA 90 bp | CATGACCCCTCGGCATTTCTGTACAGACCGAATCTGAAGGACTACGTCTATAAAGGAGCATTTCCTCTCTaGTGGTGTCAGAAAAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: HDPSAFLYRPNLKDYVYKGAFPL*WCQKKA Trigger: TGCCTTTTTCTGACACCAGCAGAGAGGAAATGCTCC...TTTATAGACGTAGTCCTTCAGATTCGGTCTGTACAGAAATGCCGAGGGGTCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR GCA 90 bp | CATGACCCCTCGGCATTTCTGTACAGACCGAATCTGAAGGACTACGTCTATAAATCCTTTAGCAAGCCTTaGACAAAGAGTCCCGATTCG | + |
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Preference number: 4 (lower is better) Translates to: HDPSAFLYRPNLKDYVYKSFSKP*TKSPDS Trigger: CGAATCGGGACTCTTTGTGCAAGGCTTGCTAAAGGA...TTTATAGACGTAGTCCTTCAGATTCGGTCTGTACAGAAATGCCGAGGGGTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR GCA 90 bp | TGTTCCTATGATGCAGGTGACACGGGAAACACCAGAGTACAGGCAGAAACCAAAAGGGTAGGACAAAACTaGCTGTTGCATCCTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSYDAGDTGNTRVQAETKRVGQN*LLHPLA Trigger: TGCTAAAGGATGCAACAGGCAGTTTTGTCCTACCCT...TTTGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCACCTGCATCATAGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | CTGATTTGTAATGCCAAAGCCACCGTGACCTTTCAGAATAGAAAGCTTTTTCTCACATCCACATCAATGTaGGTGGTGGGGTACGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LICNAKATVTFQNRKLFLTSTSM*VVGYGA Trigger: TGCCCCGTACCCCACCACGCACATTGATGTGGATGT...GAGAAAAAGCTTTCTATTCTGAAAGGTCACGGTGGCTTTGGCATTACAAATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGAAACCAAAGGAAAGAGGCAAGACGCTTCCCTGCTCTTCAAAGATCTTAATGAGGAGGAACTGTaGAAGGAAAGTACTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QAETKGKRQDASLLFKDLNEEEL*KESTPE Trigger: CTCAGGAGTACTTTCCTTGCACAGTTCCTCCTCATT...AAGATCTTTGAAGAGCAGGGAAGCGTCTTGCCTCTTTCCTTTGGTTTCTGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CCA 90 bp | TCGCTTACCATGACGGAGTGCCTTGCAGTTAGTTCACAAGCCATCATGGTCAGTTCTTCAGGAACACTGTaGGATTTCATAGATGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLTMTECLAVSSQAIMVSSSGTL*DFIDAS Trigger: GCTTGCATCTATGAAATCCCACAGTGTTCCTGAAGA...ACTGACCATGATGGCTTGTGAACTAACTGCAAGGCACTCCGTCATGGTAAGCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CCA 90 bp | ATGCATGACCCCTCGGCATTTCTGTACAGACCGAATCTGAAGGACTACGTCTATATGTTCATGACACGGTaGCATCTGCTTGACAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MHDPSAFLYRPNLKDYVYMFMTR*HLLDSV Trigger: AACACTGTCAAGCAGATGCCACCGTGTCATGAACAT...ATAGACGTAGTCCTTCAGATTCGGTCTGTACAGAAATGCCGAGGGGTCATGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGAAACCAAAGGAAAGAGGCAAGACGCTTCCCTGCTCTTCAAAGATCTTATGTTCATGACACGGTaGCATCTGCTTGACAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QAETKGKRQDASLLFKDLMFMTR*HLLDSV Trigger: AACACTGTCAAGCAGATGCCACCGTGTCATGAACAT...AAGATCTTTGAAGAGCAGGGAAGCGTCTTGCCTCTTTCCTTTGGTTTCTGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | AGATTGGGAAAGGCACAGGAGGTGCGCATTTTAATTCGGCTCAAAAATAATGAAACAGGTCTGCAGGTGTaGGCTGATGGCATTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLGKAQEVRILIRLKNNETGLQV*ADGIEK Trigger: CTTCTCAATGCCATCAGCTCACACCTGCAGACCTGT...TTCATTATTTTTGAGCCGAATTAAAATGCGCACCTCCTGTGCCTTTCCCAATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | AGATTGGGAAAGGCACAGGAGGTGCGCATTTTAATTCGGCTCAAAAATAATGAAGAAGGCTGTCAGCTCTaGCCTCATGTATCTGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLGKAQEVRILIRLKNNEEGCQL*PHVSAL Trigger: CAACGCAGATACATGAGGTCAGAGCTGACAGCCTTC...TTCATTATTTTTGAGCCGAATTAAAATGCGCACCTCCTGTGCCTTTCCCAATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | CTGATTTGTAATGCCAAAGCCACCGTGACCTTTCAGAATAGAAAGCTTTTTCTCGAAGGCTGTCAGCTCTaGCCTCATGTATCTGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LICNAKATVTFQNRKLFLEGCQL*PHVSAL Trigger: CAACGCAGATACATGAGGTCAGAGCTGACAGCCTTC...GAGAAAAAGCTTTCTATTCTGAAAGGTCACGGTGGCTTTGGCATTACAAATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | ACTGGGTCAGATTTCTCTGCTGTTCCTATGATGCAGGTGACACGGGAAACACCATATTCAAATCAGGAGTaGAGCTCTCATCTGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGSDFSAVPMMQVTRETPYSNQE*SSHLCR Trigger: TCTACACAGATGAGAGCTTCACTCCTGATTTGAATA...TGGTGTTTCCCGTGTCACCTGCATCATAGGAACAGCAGAGAAATCTGACCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | TGCCCTATCAGTGTCTTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCTTCAAGGAAAGTACTCCTaGGAGACAGGCCAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CPISVFSQELICSQTKFLQGKYS*ETGQAS Trigger: TGAAGCCTGGCCTGTCTCTCAGGAGTACTTTCCTTG...AAGGAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAAGACACTGATAGGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTATGATGCAGGTGACACGGGAAACACCAGAGTACAGGCAGAAACCAAAAAGCTCAGCTCTGTCTaGGGCAGTATAATTGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSYDAGDTGNTRVQAETKKLSSV*GSIIDS Trigger: ACTATCAATTATACTGCCGCAGACAGAGCTGAGCTT...TTTGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCACCTGCATCATAGGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGAAGTCAACTCACACTTTATCTGTAAAGCTAACGAGGGTTTCAGTGTGGTGGGATTTCATAGATaGAAGCAGCTCCATTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQEVNSHFICKANEGFSVVGFHR*KQLHYR Trigger: CCTGTAATGGAGCTGCTTGCATCTATGAAATCCCAC...CACACTGAAACCCTCGTTAGCTTTACAGATAAAGTGTGAGTTGACTTCCTGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCTTTCTGAGGAACTGCAAACATCCACATCAATGTaGGTGGTGGGGTACGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSQELICSQTKFLSEELQTSTSM*VVGYGA Trigger: TGCCCCGTACCCCACCACGCACATTGATGTGGATGT...TTGCAGTTCCTCAGAAAGGAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | CATGACCCCTCGGCATTTCTGTACAGACCGAATCTGAAGGACTACGTCTATAAAAATGAGGAGGAACTGTaGAAGGAAAGTACTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HDPSAFLYRPNLKDYVYKNEEEL*KESTPE Trigger: CTCAGGAGTACTTTCCTTGCACAGTTCCTCCTCATT...TTTATAGACGTAGTCCTTCAGATTCGGTCTGTACAGAAATGCCGAGGGGTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CCA 90 bp | CTGATTTGTAATGCCAAAGCCACCGTGACCTTTCAGAATAGAAAGCTTTTTCTCAACAGCAGGAGATGGTaGGGGGCAGATAGTCGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LICNAKATVTFQNRKLFLNSRRW*GADSRH Trigger: ATGTCGACTATCTGCCCCCCACCATCTCCTGCTGTT...GAGAAAAAGCTTTCTATTCTGAAAGGTCACGGTGGCTTTGGCATTACAAATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR CCA 90 bp | ATGCATGACCCCTCGGCATTTCTGTACAGACCGAATCTGAAGGACTACGTCTATTCTTCAGGAACACTGTaGGATTTCATAGATGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: MHDPSAFLYRPNLKDYVYSSGTL*DFIDAS Trigger: GCTTGCATCTATGAAATCCCACAGTGTTCCTGAAGA...ATAGACGTAGTCCTTCAGATTCGGTCTGTACAGAAATGCCGAGGGGTCATGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | ACTGGGTCAGATTTCTCTGCTGTTCCTATGATGCAGGTGACACGGGAAACACCACAATGTCATCATCATTaGGCACTGTATCAGCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: TGSDFSAVPMMQVTRETPQCHHH*ALYQLY Trigger: ATATAGCTGATACAGTGCTCAATGATGATGACATTG...TGGTGTTTCCCGTGTCACCTGCATCATAGGAACAGCAGAGAAATCTGACCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | CCAAGATTGGGAAAGGCACAGGAGGTGCGCATTTTAATTCGGCTCAAAAATAATAGAAGAAAGCCTTCGTaGCAGCTGTCACCAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PRLGKAQEVRILIRLKNNRRKPS*QLSPMS Trigger: TGACATTGGTGACAGCTGTCACGAAGGCTTTCTTCT...ATTATTTTTGAGCCGAATTAAAATGCGCACCTCCTGTGCCTTTCCCAATCTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | CATGACCCCTCGGCATTTCTGTACAGACCGAATCTGAAGGACTACGTCTATAAACATCCTCGATGTACTTaGTTAGTGTCAAGGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HDPSAFLYRPNLKDYVYKHPRCT*LVSRLF Trigger: GAAAAGCCTTGACACTAATCAAGTACATCGAGGATG...TTTATAGACGTAGTCCTTCAGATTCGGTCTGTACAGAAATGCCGAGGGGTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGAAGTCAACTCACACTTTATCTGTAAAGCTAACGAGGGTTTCAGTGTGTTTGGAGCCCAAATATaGCTTACTCTAGGACCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQEVNSHFICKANEGFSVFGAQI*LTLGPR Trigger: TCTTGGTCCTAGAGTAAGGCATATTTGGGCTCCAAA...CACACTGAAACCCTCGTTAGCTTTACAGATAAAGTGTGAGTTGACTTCCTGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGAAGTCAACTCACACTTTATCTGTAAAGCTAACGAGGGTTTCAGTGTGCTTCCATCCTCTCTGTaGCTTCCAAGACAATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQEVNSHFICKANEGFSVLPSSL*LPRQFS Trigger: AGAAAATTGTCTTGGAAGGCACAGAGAGGATGGAAG...CACACTGAAACCCTCGTTAGCTTTACAGATAAAGTGTGAGTTGACTTCCTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | TGCCCTATCAGTGTCTTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCTTCTTTCTCTGCACTGCTaGCAACTACAACGGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPISVFSQELICSQTKFLLSLHC*QLQRNS Trigger: GCTGTTCCGTTGTAGTTGGCAGCAGTGCAGAGAAAG...AAGGAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAAGACACTGATAGGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | AACAGAAACAGACCACTTGAGTTTGCCATAGTAGCACCTAGAAAAATAGCACTGCTTTCTCTGCACTGCTaGCAACTACAACGGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NRNRPLEFAIVAPRKIALLSLHC*QLQRNS Trigger: GCTGTTCCGTTGTAGTTGGCAGCAGTGCAGAGAAAG...CAGTGCTATTTTTCTAGGTGCTACTATGGCAAACTCAAGTGGTCTGTTTCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | AGATTGGGAAAGGCACAGGAGGTGCGCATTTTAATTCGGCTCAAAAATAATGAACTTTCTCTGCACTGCTaGCAACTACAACGGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLGKAQEVRILIRLKNNELSLHC*QLQRNS Trigger: GCTGTTCCGTTGTAGTTGGCAGCAGTGCAGAGAAAG...TTCATTATTTTTGAGCCGAATTAAAATGCGCACCTCCTGTGCCTTTCCCAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | ATGCATGACCCCTCGGCATTTCTGTACAGACCGAATCTGAAGGACTACGTCTATCTTATTTACTTTCTCTaGACTGCTGCCAACTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: MHDPSAFLYRPNLKDYVYLIYFL*TAANYN Trigger: GTTGTAGTTGGCAGCAGTGCAGAGAAAGTAAATAAG...ATAGACGTAGTCCTTCAGATTCGGTCTGTACAGAAATGCCGAGGGGTCATGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | TCGCCCTCTGCTGTTAAATCAAGATCTATCTTCAGGTTCCGAAGAGACTTAAAGGGAGCATTTCCTCTCTaGTGGTGTCAGAAAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPSAVKSRSIFRFRRDLKGAFPL*WCQKKA Trigger: TGCCTTTTTCTGACACCAGCAGAGAGGAAATGCTCC...CTTTAAGTCTCTTCGGAACCTGAAGATAGATCTTGATTTAACAGCAGAGGGCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084724.10 |
||
| CDS-3UTR GCA 90 bp | CCAAGATTGGGAAAGGCACAGGAGGTGCGCATTTTAATTCGGCTCAAAAATAATTCCTTTAGCAAGCCTTaGACAAAGAGTCCCGATTCG | + |
|
Preference number: 4 (lower is better) Translates to: PRLGKAQEVRILIRLKNNSFSKP*TKSPDS Trigger: CGAATCGGGACTCTTTGTGCAAGGCTTGCTAAAGGA...ATTATTTTTGAGCCGAATTAAAATGCGCACCTCCTGTGCCTTTCCCAATCTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CCA 90 bp | CCAAGATTGGGAAAGGCACAGGAGGTGCGCATTTTAATTCGGCTCAAAAATAATAAGCAATCTCTGTCTTaGCAACAGCAGGAGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRLGKAQEVRILIRLKNNKQSLS*QQQEMV Trigger: CACCATCTCCTGCTGTTGCCAAGACAGAGATTGCTT...ATTATTTTTGAGCCGAATTAAAATGCGCACCTCCTGTGCCTTTCCCAATCTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR CCA 90 bp | GCTGTTCCTATGATGCAGGTGACACGGGAAACACCAGAGTACAGGCAGAAACCATCTCCATTTAGAGTGTaGTTGGCAAGAAAAGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: AVPMMQVTRETPEYRQKPSPFRV*LARKVI Trigger: AATAACTTTTCTTGCCAACCACACTCTAAATGGAGA...TGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCACCTGCATCATAGGAACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR CCA 90 bp | CTGATTTGTAATGCCAAAGCCACCGTGACCTTTCAGAATAGAAAGCTTTTTCTCACACACTCTGTGAAGTaGGAGGTAGAAGCTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LICNAKATVTFQNRKLFLTHSVK*EVEAQL Trigger: GAGCTGAGCTTCTACCTCCCACTTCACAGAGTGTGT...GAGAAAAAGCTTTCTATTCTGAAAGGTCACGGTGGCTTTGGCATTACAAATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGAAACCAAAGGAAAGAGGCAAGACGCTTCCCTGCTCTTCAAAGATCTTCAATGTCATCATCATTaGGCACTGTATCAGCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: QAETKGKRQDASLLFKDLQCHHH*ALYQLY Trigger: ATATAGCTGATACAGTGCTCAATGATGATGACATTG...AAGATCTTTGAAGAGCAGGGAAGCGTCTTGCCTCTTTCCTTTGGTTTCTGCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | CTCTGCCCTATCAGTGTCTTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCTTCAAATGGAAGACCTaGTCCAGGAAGGCTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LCPISVFSQELICSQTKFFKWKT*SRKAFT Trigger: AGTGAAAGCCTTCCTGGATCAGGTCTTCCATTTGAA...GAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAAGACACTGATAGGGCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCCTATCAGTGTCTTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCGTGGGATTTCATAGATaGAAGCAGCTCCATTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCPISVFSQELICSQTKFVGFHR*KQLHYR Trigger: CCTGTAATGGAGCTGCTTGCATCTATGAAATCCCAC...GAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAAGACACTGATAGGGCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | TCGCCCTCTGCTGTTAAATCAAGATCTATCTTCAGGTTCCGAAGAGACTTAAAGTTACTTTCTCTGCACTaGTGCCAACTACAACGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPSAVKSRSIFRFRRDLKLLSLH*CQLQRN Trigger: GTTCCGTTGTAGTTGGCAGCAGTGCAGAGAAAGTAA...CTTTAAGTCTCTTCGGAACCTGAAGATAGATCTTGATTTAACAGCAGAGGGCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084724.10 |
||
| CDS-3UTR GCA 90 bp | CCAAGATTGGGAAAGGCACAGGAGGTGCGCATTTTAATTCGGCTCAAAAATAATAGGGTAGGACAAAACTaGCTGTTGCATCCTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRLGKAQEVRILIRLKNNRVGQN*LLHPLA Trigger: TGCTAAAGGATGCAACAGGCAGTTTTGTCCTACCCT...ATTATTTTTGAGCCGAATTAAAATGCGCACCTCCTGTGCCTTTCCCAATCTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | TGCCCTATCAGTGTCTTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCTTGGGGCATACATAACTTaGCGGAAGGGTAGGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CPISVFSQELICSQTKFLGAYIT*RKGRTK Trigger: TTTTGTCCTACCCTTCCGGCAAGTTATGTATGCCCC...AAGGAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAAGACACTGATAGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CCA 90 bp | AACAGAAACAGACCACTTGAGTTTGCCATAGTAGCACCTAGAAAAATAGCACTGTCACTGAGAAGCACTTaGTCTGTCTTTGGAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NRNRPLEFAIVAPRKIALSLRST*SVFGAQ Trigger: TTGGGCTCCAAAGACAGACCAAGTGCTTCTCAGTGA...CAGTGCTATTTTTCTAGGTGCTACTATGGCAAACTCAAGTGGTCTGTTTCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR CCA 90 bp | AGATTGGGAAAGGCACAGGAGGTGCGCATTTTAATTCGGCTCAAAAATAATGAATCACTGAGAAGCACTTaGTCTGTCTTTGGAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLGKAQEVRILIRLKNNESLRST*SVFGAQ Trigger: TTGGGCTCCAAAGACAGACCAAGTGCTTCTCAGTGA...TTCATTATTTTTGAGCCGAATTAAAATGCGCACCTCCTGTGCCTTTCCCAATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | CTGATTTGTAATGCCAAAGCCACCGTGACCTTTCAGAATAGAAAGCTTTTTCTCTTCAAATGGAAGACCTaGTCCAGGAAGGCTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LICNAKATVTFQNRKLFLFKWKT*SRKAFT Trigger: AGTGAAAGCCTTCCTGGATCAGGTCTTCCATTTGAA...GAGAAAAAGCTTTCTATTCTGAAAGGTCACGGTGGCTTTGGCATTACAAATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | TCGCCCTCTGCTGTTAAATCAAGATCTATCTTCAGGTTCCGAAGAGACTTAAAGCATCCTCGATGTACTTaGTTAGTGTCAAGGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPSAVKSRSIFRFRRDLKHPRCT*LVSRLF Trigger: GAAAAGCCTTGACACTAATCAAGTACATCGAGGATG...CTTTAAGTCTCTTCGGAACCTGAAGATAGATCTTGATTTAACAGCAGAGGGCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084724.10 |
||
| CDS-3UTR GCA 90 bp | CCAAGATTGGGAAAGGCACAGGAGGTGCGCATTTTAATTCGGCTCAAAAATAATTATAGCCCCACTCTCTaGATTTCGAAGAATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRLGKAQEVRILIRLKNNYSPTL*ISKNFS Trigger: GGAGAAATTCTTCGAAATGCAGAGAGTGGGGCTATA...ATTATTTTTGAGCCGAATTAAAATGCGCACCTCCTGTGCCTTTCCCAATCTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | TCGCCCTCTGCTGTTAAATCAAGATCTATCTTCAGGTTCCGAAGAGACTTAAAGAAGCTCAGCTCTGTCTaGGGCAGTATAATTGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPSAVKSRSIFRFRRDLKKLSSV*GSIIDS Trigger: ACTATCAATTATACTGCCGCAGACAGAGCTGAGCTT...CTTTAAGTCTCTTCGGAACCTGAAGATAGATCTTGATTTAACAGCAGAGGGCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084724.10 |
||
| CDS-3UTR GCA 90 bp | AACAGAAACAGACCACTTGAGTTTGCCATAGTAGCACCTAGAAAAATAGCACTGTTACTTTCTCTGCACTaGTGCCAACTACAACGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NRNRPLEFAIVAPRKIALLLSLH*CQLQRN Trigger: GTTCCGTTGTAGTTGGCAGCAGTGCAGAGAAAGTAA...CAGTGCTATTTTTCTAGGTGCTACTATGGCAAACTCAAGTGGTCTGTTTCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | TGCCCTATCAGTGTCTTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCTTAATGAGGAGGAACTGTaGAAGGAAAGTACTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CPISVFSQELICSQTKFLNEEEL*KESTPE Trigger: CTCAGGAGTACTTTCCTTGCACAGTTCCTCCTCATT...AAGGAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAAGACACTGATAGGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGAAACCAAAGGAAAGAGGCAAGACGCTTCCCTGCTCTTCAAAGATCTTCATTTAGAGTGTGGTTaGCAAGAAAAGTTATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QAETKGKRQDASLLFKDLHLECG*QEKLFL Trigger: GAGAAATAACTTTTCTTGCCAACCACACTCTAAATG...AAGATCTTTGAAGAGCAGGGAAGCGTCTTGCCTCTTTCCTTTGGTTTCTGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR CCA 90 bp | TGCCCTATCAGTGTCTTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCTTATGTTCATGACACGGTaGCATCTGCTTGACAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CPISVFSQELICSQTKFLMFMTR*HLLDSV Trigger: AACACTGTCAAGCAGATGCCACCGTGTCATGAACAT...AAGGAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAAGACACTGATAGGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | AACAGAAACAGACCACTTGAGTTTGCCATAGTAGCACCTAGAAAAATAGCACTGTTATTTCTCCATCACTaGGAAGCACTTGGTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRNRPLEFAIVAPRKIALLFLHH*EALGLS Trigger: AGACAGACCAAGTGCTTCTCAGTGATGGAGAAATAA...CAGTGCTATTTTTCTAGGTGCTACTATGGCAAACTCAAGTGGTCTGTTTCTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCTTTCTGAGGAACTGCAATTCAAATGGAAGACCTaGTCCAGGAAGGCTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FSQELICSQTKFLSEELQFKWKT*SRKAFT Trigger: AGTGAAAGCCTTCCTGGATCAGGTCTTCCATTTGAA...TTGCAGTTCCTCAGAAAGGAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | AGATTGGGAAAGGCACAGGAGGTGCGCATTTTAATTCGGCTCAAAAATAATGAATATAGCCCCACTCTCTaGATTTCGAAGAATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLGKAQEVRILIRLKNNEYSPTL*ISKNFS Trigger: GGAGAAATTCTTCGAAATGCAGAGAGTGGGGCTATA...TTCATTATTTTTGAGCCGAATTAAAATGCGCACCTCCTGTGCCTTTCCCAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | CTGATTTGTAATGCCAAAGCCACCGTGACCTTTCAGAATAGAAAGCTTTTTCTCTATTCAAATCAGGAGTaGAGCTCTCATCTGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LICNAKATVTFQNRKLFLYSNQE*SSHLCR Trigger: TCTACACAGATGAGAGCTTCACTCCTGATTTGAATA...GAGAAAAAGCTTTCTATTCTGAAAGGTCACGGTGGCTTTGGCATTACAAATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCTTTCTGAGGAACTGCAACATCCTCGATGTACTTaGTTAGTGTCAAGGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSQELICSQTKFLSEELQHPRCT*LVSRLF Trigger: GAAAAGCCTTGACACTAATCAAGTACATCGAGGATG...TTGCAGTTCCTCAGAAAGGAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCTTTCTGAGGAACTGCAATTTGGAGCCCAAATATaGCTTACTCTAGGACCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSQELICSQTKFLSEELQFGAQI*LTLGPR Trigger: TCTTGGTCCTAGAGTAAGGCATATTTGGGCTCCAAA...TTGCAGTTCCTCAGAAAGGAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | TGCCCTATCAGTGTCTTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCTTCTTATTTACTTTCTCTaGACTGCTGCCAACTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: CPISVFSQELICSQTKFLLIYFL*TAANYN Trigger: GTTGTAGTTGGCAGCAGTGCAGAGAAAGTAAATAAG...AAGGAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAAGACACTGATAGGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR TCA 90 bp | AACAGAAACAGACCACTTGAGTTTGCCATAGTAGCACCTAGAAAAATAGCACTGCAATGTCATCATCATTaGGCACTGTATCAGCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: NRNRPLEFAIVAPRKIALQCHHH*ALYQLY Trigger: ATATAGCTGATACAGTGCTCAATGATGATGACATTG...CAGTGCTATTTTTCTAGGTGCTACTATGGCAAACTCAAGTGGTCTGTTTCTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR GCA 90 bp | TTAATTTTCTCAGCTAGAGCCATTATTATGTTAAGATCGCCCTCTGCTGTTAAAAGGGTAGGACAAAACTaGCTGTTGCATCCTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIFSARAIIMLRSPSAVKRVGQN*LLHPLA Trigger: TGCTAAAGGATGCAACAGGCAGTTTTGTCCTACCCT...TTTAACAGCAGAGGGCGATCTTAACATAATAATGGCTCTAGCTGAGAAAATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084724.10 |
||
| CDS-3UTR GCA 90 bp | TTAATTTTCTCAGCTAGAGCCATTATTATGTTAAGATCGCCCTCTGCTGTTAAATTGATAGTCCATAAGTaGTCCGATCTCCATTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LIFSARAIIMLRSPSAVKLIVHK*SDLHSS Trigger: ACTGGAATGGAGATCGGAGCACTTATGGACTATCAA...TTTAACAGCAGAGGGCGATCTTAACATAATAATGGCTCTAGCTGAGAAAATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084724.10 |
||
| CDS-3UTR TCA 90 bp | TTAATTTTCTCAGCTAGAGCCATTATTATGTTAAGATCGCCCTCTGCTGTTAAATATTCAAATCAGGAGTaGAGCTCTCATCTGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIFSARAIIMLRSPSAVKYSNQE*SSHLCR Trigger: TCTACACAGATGAGAGCTTCACTCCTGATTTGAATA...TTTAACAGCAGAGGGCGATCTTAACATAATAATGGCTCTAGCTGAGAAAATTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084724.10 |
||
| CDS-3UTR CCA 90 bp | GCTGTTAAATCAAGATCTATCTTCAGGTTCCGAAGAGACTTAAAGGGCTTTTTCCATTTAGAGTGTGGTTaGCAAGAAAAGTTATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AVKSRSIFRFRRDLKGFFHLECG*QEKLFL Trigger: GAGAAATAACTTTTCTTGCCAACCACACTCTAAATG...GAAAAAGCCCTTTAAGTCTCTTCGGAACCTGAAGATAGATCTTGATTTAACAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084724.10 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCTTTCTGAGGAACTGCAATCTCCATTTAGAGTGTaGTTGGCAAGAAAAGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: FSQELICSQTKFLSEELQSPFRV*LARKVI Trigger: AATAACTTTTCTTGCCAACCACACTCTAAATGGAGA...TTGCAGTTCCTCAGAAAGGAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| 3UTR CAA 72 bp | TATGCTAAGTCCACAGTTTTAAATAGAAACACATATTaGTGTTTGTGTATACTCCTACACTGCTGTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: YAKSTVLNRNTY*CLCILLHCCCT Trigger: TGTGCAACAGCAGTGTAGGAGTATACACAAACACAAATATGTGTTTCTATTTAAAACTGTGGACTTAGCATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | ACTGGGTCAGATTTCTCTGCTGTTCCTATGATGCAGGTGACACGGGAAACACCACACGGTGGCATCTGCTaGACAGTGTTGACATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TGSDFSAVPMMQVTRETPHGGIC*TVLTST Trigger: TGTGGATGTCAACACTGTCAAGCAGATGCCACCGTG...TGGTGTTTCCCGTGTCACCTGCATCATAGGAACAGCAGAGAAATCTGACCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | ACTGGGTCAGATTTCTCTGCTGTTCCTATGATGCAGGTGACACGGGAAACACCATGTCCTCTTCTGAAGTaGCCCTCCAGAAGGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TGSDFSAVPMMQVTRETPCPLLK*PSRRLS Trigger: TGACAGCCTTCTGGAGGGCAACTTCAGAAGAGGACA...TGGTGTTTCCCGTGTCACCTGCATCATAGGAACAGCAGAGAAATCTGACCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGAAACCAAAGGAAAGAGGCAAGACGCTTCCCTGCTCTTCAAAGATCTTCACGGTGGCATCTGCTaGACAGTGTTGACATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QAETKGKRQDASLLFKDLHGGIC*TVLTST Trigger: TGTGGATGTCAACACTGTCAAGCAGATGCCACCGTG...AAGATCTTTGAAGAGCAGGGAAGCGTCTTGCCTCTTTCCTTTGGTTTCTGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS GCA 90 bp | CAAGCCTTGCACAAAGAGTCCCGATTCGTACTTAAAGGACGATTCTaGTTCACACAGCCTGGAGCATTTCCTCTCTGCTGGTGTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QALHKESRFVLKGRF*FTQPGAFPLCWCQK Trigger: TTTCTGACACCAGCAGAGAGGAAATGCTCCAGGCTGTGTGAAGCAGAATCGTCCTTTAAGTACGAATCGGGACTCTTTGTGCAAGGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | ACTGGGTCAGATTTCTCTGCTGTTCCTATGATGCAGGTGACACGGGAAACACCAGCACTTGGTCTGTCTTaGGAGCCCAAATATGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TGSDFSAVPMMQVTRETPALGLS*EPKYAL Trigger: TAAGGCATATTTGGGCTCCAAAGACAGACCAAGTGC...TGGTGTTTCCCGTGTCACCTGCATCATAGGAACAGCAGAGAAATCTGACCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | ATGCATGACCCCTCGGCATTTCTGTACAGACCGAATCTGAAGGACTACGTCTATATCACTGAGAAGCACTaGGTCTGTCTTTGGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: MHDPSAFLYRPNLKDYVYITEKH*VCLWSP Trigger: TGGGCTCCAAAGACAGACCAAGTGCTTCTCAGTGAT...ATAGACGTAGTCCTTCAGATTCGGTCTGTACAGAAATGCCGAGGGGTCATGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGAAGTCAACTCACACTTTATCTGTAAAGCTAACGAGGGTTTCAGTGTGCACGGTGGCATCTGCTaGACAGTGTTGACATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GQEVNSHFICKANEGFSVHGGIC*TVLTST Trigger: TGTGGATGTCAACACTGTCAAGCAGATGCCACCGTG...CACACTGAAACCCTCGTTAGCTTTACAGATAAAGTGTGAGTTGACTTCCTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS GCA 90 bp | GAAAAAGGCACAGCGTTCTTACTATCTTATTTACTTTCTCTGCACTaGTGCCAACTACAACGGAACAGCCACAGGTCTGCAGGTGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: EKGTAFLLSYLLSLH*CQLQRNSHRSAGVS Trigger: GCTCACACCTGCAGACCTGTGGCTGTTCCGTTGTAGTTGGCAGCAGTGCAGAGAAAGTAAATAAGATAGTAAGAACGCTGTGCCTTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS GCA 90 bp | CGGAAGGGTAGGACAAAACTGCCTGTTGCATCCTTTAGCAAGCCTTaGACAAAGAGTCCCGATTCGTACTTAAAGGACGATTCTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RKGRTKLPVASFSKP*TKSPDSYLKDDSAS Trigger: TGAAGCAGAATCGTCCTTTAAGTACGAATCGGGACTCTTTGTGCAAGGCTTGCTAAAGGATGCAACAGGCAGTTTTGTCCTACCCTTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | CATGACCCCTCGGCATTTCTGTACAGACCGAATCTGAAGGACTACGTCTATAAAAAAGCAATCTCTGTCTaGGCAACAGCAGGAGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: HDPSAFLYRPNLKDYVYKKAISV*ATAGDG Trigger: ACCATCTCCTGCTGTTGCCAAGACAGAGATTGCTTT...TTTATAGACGTAGTCCTTCAGATTCGGTCTGTACAGAAATGCCGAGGGGTCATG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | GTGACACGGGAAACACCAGAGTACAGGCAGAAACCAAAGGAAAGAGGCAAGACGCCAATGTCATCATCATaGAGCACTGTATCAGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: VTRETPEYRQKPKERGKTPMSSS*STVSAI Trigger: TATAGCTGATACAGTGCTCAATGATGATGACATTGG...CGTCTTGCCTCTTTCCTTTGGTTTCTGCCTGTACTCTGGTGTTTCCCGTGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGAAGTCAACTCACACTTTATCTGTAAAGCTAACGAGGGTTTCAGTGTGATCTGCTTGACAGTGTaGACATCCACATCAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GQEVNSHFICKANEGFSVICLTV*TSTSMC Trigger: GCACATTGATGTGGATGTCAACACTGTCAAGCAGAT...CACACTGAAACCCTCGTTAGCTTTACAGATAAAGTGTGAGTTGACTTCCTGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | TGCCCTATCAGTGTCTTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCTTTGTCCTCTTCTGAAGTaGCCCTCCAGAAGGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CPISVFSQELICSQTKFLCPLLK*PSRRLS Trigger: TGACAGCCTTCTGGAGGGCAACTTCAGAAGAGGACA...AAGGAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAAGACACTGATAGGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS GCA 90 bp | ATCAGCTATATCAATGTCTTCAGGAACACTGTGGGATTTCATAGATaGAAGCAGCTCCATTACAGGAATGACTTCCCCAGTAAGCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: ISYINVFRNTVGFHR*KQLHYRNDFPSKHG Trigger: CCCATGCTTACTGGGGAAGTCATTCCTGTAATGGAGCTGCTTGCATCTATGAAATCCCACAGTGTTCCTGAAGACATTGATATAGCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS GCA 90 bp | CTTAAAGGACGATTCTGCTTCACACAGCCTGGAGCATTTCCTCTCTaGTGGTGTCAGAAAAAGGCACAGCGTTCTTACTATCTTATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LKGRFCFTQPGAFPL*WCQKKAQRSYYLIY Trigger: GTAAATAAGATAGTAAGAACGCTGTGCCTTTTTCTGACACCAGCAGAGAGGAAATGCTCCAGGCTGTGTGAAGCAGAATCGTCCTTTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | CCAAGATTGGGAAAGGCACAGGAGGTGCGCATTTTAATTCGGCTCAAAAATAATAAAGCAATCTCTGTCTaGGCAACAGCAGGAGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: PRLGKAQEVRILIRLKNNKAISV*ATAGDG Trigger: ACCATCTCCTGCTGTTGCCAAGACAGAGATTGCTTT...ATTATTTTTGAGCCGAATTAAAATGCGCACCTCCTGTGCCTTTCCCAATCTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | ATGCATGACCCCTCGGCATTTCTGTACAGACCGAATCTGAAGGACTACGTCTATCCAATGTCATCATCATaGAGCACTGTATCAGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: MHDPSAFLYRPNLKDYVYPMSSS*STVSAI Trigger: TATAGCTGATACAGTGCTCAATGATGATGACATTGG...ATAGACGTAGTCCTTCAGATTCGGTCTGTACAGAAATGCCGAGGGGTCATGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | GCTGTTAAATCAAGATCTATCTTCAGGTTCCGAAGAGACTTAAAGGGCTTTTTCTGTCCTCTTCTGAAGTaGCCCTCCAGAAGGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AVKSRSIFRFRRDLKGFFCPLLK*PSRRLS Trigger: TGACAGCCTTCTGGAGGGCAACTTCAGAAGAGGACA...GAAAAAGCCCTTTAAGTCTCTTCGGAACCTGAAGATAGATCTTGATTTAACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084724.10 |
||
| CDS TCA 90 bp | CTCCATTTAGAGTGTGGTTGGCAAGAAAAGTTATTTCTCCATCACTaGGAAGCACTTGGTCTGTCTTTGGAGCCCAAATATGCCTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: LHLECGWQEKLFLHH*EALGLSLEPKYALL Trigger: GAGTAAGGCATATTTGGGCTCCAAAGACAGACCAAGTGCTTCTCAGTGATGGAGAAATAACTTTTCTTGCCAACCACACTCTAAATGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS CCA 90 bp | TCATTGAGCACTGTATCAGCTATATCAATGTCTTCAGGAACACTGTaGGATTTCATAGATGCAAGCAGCTCCATTACAGGAATGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSTVSAISMSSGTL*DFIDASSSITGMTS Trigger: GGAAGTCATTCCTGTAATGGAGCTGCTTGCATCTATGAAATCCCACAGTGTTCCTGAAGACATTGATATAGCTGATACAGTGCTCAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCTTTCTGAGGAACTGCAAGCACTTGGTCTGTCTTaGGAGCCCAAATATGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: FSQELICSQTKFLSEELQALGLS*EPKYAL Trigger: TAAGGCATATTTGGGCTCCAAAGACAGACCAAGTGC...TTGCAGTTCCTCAGAAAGGAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | CTGATTTGTAATGCCAAAGCCACCGTGACCTTTCAGAATAGAAAGCTTTTTCTCATCTGCTTGACAGTGTaGACATCCACATCAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LICNAKATVTFQNRKLFLICLTV*TSTSMC Trigger: GCACATTGATGTGGATGTCAACACTGTCAAGCAGAT...GAGAAAAAGCTTTCTATTCTGAAAGGTCACGGTGGCTTTGGCATTACAAATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCCTATCAGTGTCTTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCCAATGTCATCATCATaGAGCACTGTATCAGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: LCPISVFSQELICSQTKFPMSSS*STVSAI Trigger: TATAGCTGATACAGTGCTCAATGATGATGACATTGG...GAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAAGACACTGATAGGGCAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS-3UTR CAA 90 bp | TTCTCTCAAGAACTAATCTGTAGTCAGACTAAGTTCCTTTCTGAGGAACTGCAAATCTGCTTGACAGTGTaGACATCCACATCAATGTGC | + |
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Preference number: 5 (lower is better) Translates to: FSQELICSQTKFLSEELQICLTV*TSTSMC Trigger: GCACATTGATGTGGATGTCAACACTGTCAAGCAGAT...TTGCAGTTCCTCAGAAAGGAACTTAGTCTGACTACAGATTAGTTCTTGAGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS CCA 90 bp | AAGAAAAGTTATTTCTCCATCACTGAGAAGCACTTGGTCTGTCTTTaGAGCCCAAATATGCCTTACTCTAGGACCAAGAATATTATCCCA | + |
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Preference number: 5 (lower is better) Translates to: KKSYFSITEKHLVCL*SPNMPYSRTKNIIP Trigger: TGGGATAATATTCTTGGTCCTAGAGTAAGGCATATTTGGGCTCCAAAGACAGACCAAGTGCTTCTCAGTGATGGAGAAATAACTTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
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| CDS TCA 72 bp | GCCAACTACAACGGAACAGCCACAGGTCTGCAGGTGTaGGCTGATGGCATTGAGAAGAAAGCCTTCGTGACA | + |
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Preference number: 6 (lower is better) Translates to: ANYNGTATGLQV*ADGIEKKAFVT Trigger: TGTCACGAAGGCTTTCTTCTCAATGCCATCAGCTCACACCTGCAGACCTGTGGCTGTTCCGTTGTAGTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS GCA 72 bp | CGATTCTGCTTCACACAGCCTGGAGCATTTCCTCTCTaGTGGTGTCAGAAAAAGGCACAGCGTTCTTACTAT | + |
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Preference number: 6 (lower is better) Translates to: RFCFTQPGAFPL*WCQKKAQRSYY Trigger: ATAGTAAGAACGCTGTGCCTTTTTCTGACACCAGCAGAGAGGAAATGCTCCAGGCTGTGTGAAGCAGAATCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS GCA 72 bp | TGTCAAGGCTTTTCTGTGAAGAATGAGGAGGAACTGTaGAAGGAAAGTACTCCTGAGAGACAGGCCAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: CQGFSVKNEEEL*KESTPERQARL Trigger: AAGCCTGGCCTGTCTCTCAGGAGTACTTTCCTTGCACAGTTCCTCCTCATTCTTCACAGAAAAGCCTTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS GCA 72 bp | GCGTTCTTACTATCTTATTTACTTTCTCTGCACTGCTaGCAACTACAACGGAACAGCCACAGGTCTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: AFLLSYLLSLHC*QLQRNSHRSAG Trigger: ACCTGCAGACCTGTGGCTGTTCCGTTGTAGTTGGCAGCAGTGCAGAGAAAGTAAATAAGATAGTAAGAACGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS GCA 72 bp | CCCTCCAGAAGGCTGTCAGCTCTGACCTCATGTATCTaGGTTGATTATAAATATGTTCATGACACGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: PSRRLSALTSCI*VDYKYVHDTVA Trigger: TGCCACCGTGTCATGAACATATTTATAATCAACGCAGATACATGAGGTCAGAGCTGACAGCCTTCTGGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS GCA 72 bp | AGGTTCCGAAGAGACTTAAAGGGCTTTTTCCCCTTCTaGGTATCATCCTCGATGTACTTGATTAGTGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: RFRRDLKGFFPF*VSSSMYLISVK Trigger: CTTGACACTAATCAAGTACATCGAGGATGATACGCAGAAGGGGAAAAAGCCCTTTAAGTCTCTTCGGAACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS CCA 72 bp | TATTTCTCCATCACTGAGAAGCACTTGGTCTGTCTTTaGAGCCCAAATATGCCTTACTCTAGGACCAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: YFSITEKHLVCL*SPNMPYSRTKN Trigger: ATTCTTGGTCCTAGAGTAAGGCATATTTGGGCTCCAAAGACAGACCAAGTGCTTCTCAGTGATGGAGAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084724.10 ENSMUST00000108127.4 |
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| CDS CCA 72 bp | ACTGTATCAGCTATATCAATGTCTTCAGGAACACTGTaGGATTTCATAGATGCAAGCAGCTCCATTACAGGA | + |
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Preference number: 6 (lower is better) Translates to: TVSAISMSSGTL*DFIDASSSITG Trigger: TCCTGTAATGGAGCTGCTTGCATCTATGAAATCCCACAGTGTTCCTGAAGACATTGATATAGCTGATACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS CCA 72 bp | GTATCTGCGTTGATTATAAATATGTTCATGACACGGTaGCATCTGCTTGACAGTGTTGACATCCACATCAAT | + |
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Preference number: 6 (lower is better) Translates to: VSALIINMFMTR*HLLDSVDIHIN Trigger: ATTGATGTGGATGTCAACACTGTCAAGCAGATGCCACCGTGTCATGAACATATTTATAATCAACGCAGATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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| CDS CCA 72 bp | AAGGCTTTCACTAGAGTGTCTCTGTGTAAGACATCTTaGAAAATATTCAAATCAGGAGTGAAGCTCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: KAFTRVSLCKTS*KIFKSGVKLSS Trigger: AGATGAGAGCTTCACTCCTGATTTGAATATTTTCCAAGATGTCTTACACAGAGACACTCTAGTGAAAGCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084724.10 ENSMUST00000108126.8 ENSMUST00000108127.4 |
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