Pregenerated sensors for C9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022149Ensembl transcript IDs: ENSMUST00000022749.17, ENSMUST00000128097.3, ENSMUST00000147905.2, ENSMUST00000239466.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTAGTCCCAGCTCTGATTCTTCCGCTACTCGGTCACGGCATGGGGTaGGTGGGTCATCGTCACAGTCATTCTCATCAGAATAATCTCCAC | + |
|
Preference number: 1 (lower is better) Translates to: LVPALILPLLGHGMG*VGHRHSHSHQNNLH Trigger: GTGGAGATTATTCTGATGAGAATGACTGTGACGATGACCCACGCACCCCATGCCGTGACCGAGTAGCGGAAGAATCAGAGCTGGGACTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR CCA 90 bp | ACTCTGACCAATTGCTCCATGGGCTCATTCTGCAGTCTATCGGTATaGGATAGTGTTGTTCTTGTTCTTCTCCAGCAGAGGAGACTTTTG | + |
|
Preference number: 1 (lower is better) Translates to: TLTNCSMGSFCSLSV*DSVVLVLLQQRRLL Trigger: CAAAAGTCTCCTCTGCTGGAGAAGAACAAGAACAACACTATCCCATACCGATAGACTGCAGAATGAGCCCATGGAGCAATTGGTCAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR TCA 90 bp | CCATTACACAGAAGTCTCCTCTTTATGCACCTGCCTGTCTCACACTaGAAGTCATTTCCACAGTTTTCCTGTATCTCTTCACACTCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: PLHRSLLFMHLPVSH*KSFPQFSCISSHSW Trigger: CCAGGAGTGTGAAGAGATACAGGAAAACTGTGGAAATGACTTTCAGTGTGAGACAGGCAGGTGCATAAAGAGGAGACTTCTGTGTAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR CCA 90 bp | GAAAGTCATTTCCACAGTTTTCCTGTATCTCTTCACACTCCTGGGTaGGTTCACAGCCTTGTCTGTCTCCCAAAACATCAACACAGCTTT | + |
|
Preference number: 1 (lower is better) Translates to: ESHFHSFPVSLHTPG*VHSLVCLPKHQHSF Trigger: AAAGCTGTGTTGATGTTTTGGGAGACAGACAAGGCTGTGAACCCACCCAGGAGTGTGAAGAGATACAGGAAAACTGTGGAAATGACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR GCA 90 bp | CACAGTCGTTGTCACCATTACACAGAAGTCTCCTCTTTATGCACCTaGCTGTCTCACACTGAAAGTCATTTCCACAGTTTTCCTGTATCT | + |
|
Preference number: 1 (lower is better) Translates to: HSRCHHYTEVSSLCT*LSHTESHFHSFPVS Trigger: AGATACAGGAAAACTGTGGAAATGACTTTCAGTGTGAGACAGGCAGGTGCATAAAGAGGAGACTTCTGTGTAATGGTGACAACGACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR GCA 90 bp | TATGGGATAGTGTTGTTCTTGTTCTTCTCCAGCAGAGGAGACTTTTaGAGACACAATTCTTTGCTTTTTAGTAGAATCATTCTAGAGCCA | + |
|
Preference number: 1 (lower is better) Translates to: YGIVLFLFFSSRGDF*RHNSLLFSRIILEP Trigger: TGGCTCTAGAATGATTCTACTAAAAAGCAAAGAATTGTGTCTGCAAAAGTCTCCTCTGCTGGAGAAGAACAAGAACAACACTATCCCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR-3UTR GCA 90 bp | GTTGTCACCATTACACAGAAGTCTCCTCTTTATGCACCTGCCTGTCTCACACTGCACACTCTGACCAATTaGTCCATGGGCTCATTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: VVTITQKSPLYAPACLTLHTLTN*SMGSFC Trigger: GCAGAATGAGCCCATGGAGCAATTGGTCAGAGTGTG...CAGTGTGAGACAGGCAGGTGCATAAAGAGGAGACTTCTGTGTAATGGTGACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR-3UTR GCA 90 bp | CCGGTCACAGAGTCCGTTGTAGAACTCATTGTCAAAAGGTGTTCTCAGGGGCTCTCCTCTTTATGCACCTaGCTGTCTCACACTGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: PVTESVVELIVKRCSQGLSSLCT*LSHTES Trigger: ACTTTCAGTGTGAGACAGGCAGGTGCATAAAGAGGA...GAGCCCCTGAGAACACCTTTTGACAATGAGTTCTACAACGGACTCTGTGACCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR-3UTR GCA 90 bp | CCGGTCACAGAGTCCGTTGTAGAACTCATTGTCAAAAGGTGTTCTCAGGGGCTCGTCCGAAGGCTAAAATaGTTCTTGAGCGAAACCTTT | + |
|
Preference number: 2 (lower is better) Translates to: PVTESVVELIVKRCSQGLVRRLK*FLSETF Trigger: AAAGGTTTCGCTCAAGAAGCATTTTAGCCTTCGGAC...GAGCCCCTGAGAACACCTTTTGACAATGAGTTCTACAACGGACTCTGTGACCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR-3UTR TCA 90 bp | GAAAAGGCAGCCCGGGCATATCTCACTGCTGACTCTTCATTAGGGAATGAAAAATTTCCCCCTTCCATGTaGACCAGGGTTTGCTTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: EKAARAYLTADSSLGNEKFPPSM*TRVCFV Trigger: AACAAAGCAAACCCTGGTTCACATGGAAGGGGGAAA...TTTTTCATTCCCTAATGAAGAGTCAGCAGTGAGATATGCCCGGGCTGCCTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| 3UTR CAA 90 bp | CCATGGGCTCATTCTGCAGTCTATCGGTATGGGATAGTGTTGTTCTaGTTCTTCTCCAGCAGAGGAGACTTTTGCAGACACAATTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: PWAHSAVYRYGIVLF*FFSSRGDFCRHNSL Trigger: CAAAGAATTGTGTCTGCAAAAGTCTCCTCTGCTGGAGAAGAACAAGAACAACACTATCCCATACCGATAGACTGCAGAATGAGCCCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR CAA 90 bp | ATTGCTCCATGGGCTCATTCTGCAGTCTATCGGTATGGGATAGTGTaGTTCTTGTTCTTCTCCAGCAGAGGAGACTTTTGCAGACACAAT | + |
|
Preference number: 2 (lower is better) Translates to: IAPWAHSAVYRYGIV*FLFFSSRGDFCRHN Trigger: ATTGTGTCTGCAAAAGTCTCCTCTGCTGGAGAAGAACAAGAACAACACTATCCCATACCGATAGACTGCAGAATGAGCCCATGGAGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTGGGTGGGTTCACAGCCTTGTCTGTCTCCCAAAACATCAACACAGCTTTTAGCAGAGGAGACTTTTaGAGACACAATTCTTTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: LLGGFTALSVSQNINTAFSRGDF*RHNSLL Trigger: AAGCAAAGAATTGTGTCTGCAAAAGTCTCCTCTGCT...AAAAGCTGTGTTGATGTTTTGGGAGACAGACAAGGCTGTGAACCCACCCAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR CAA 90 bp | TTAAACTGTCCGAAGGCTAAAATGCTTCTTGAGCGAAACCTTTGTTaGAGGCAAGGATCACACTCTGACCAATTGCTCCATGGGCTCATT | + |
|
Preference number: 2 (lower is better) Translates to: LNCPKAKMLLERNLC*RQGSHSDQLLHGLI Trigger: AATGAGCCCATGGAGCAATTGGTCAGAGTGTGATCCTTGCCTCAAACAAAGGTTTCGCTCAAGAAGCATTTTAGCCTTCGGACAGTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTGTCACCATTACACAGAAGTCTCCTCTTTATGCACCTGCCTGTCTCACACTGTGCAGTCTATCGGTATaGGATAGTGTTGTTCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: VVTITQKSPLYAPACLTLCSLSV*DSVVLV Trigger: AACAAGAACAACACTATCCCATACCGATAGACTGCA...CAGTGTGAGACAGGCAGGTGCATAAAGAGGAGACTTCTGTGTAATGGTGACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR GCA 72 bp | GCTCTGATTCTTCCGCTACTCGGTCACGGCATGGGGTaGGTGGGTCATCGTCACAGTCATTCTCATCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: ALILPLLGHGMG*VGHRHSHSHQN Trigger: ATTCTGATGAGAATGACTGTGACGATGACCCACGCACCCCATGCCGTGACCGAGTAGCGGAAGAATCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTGGGTTCACAGCCTTGTCTGTCTCCCAAAACATCAACACAGCTTTTCCCACAGCAGAGGAGACTTTaGCAGACACAATTCTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: WVGSQPCLSPKTSTQLFPQQRRL*QTQFFA Trigger: AGCAAAGAATTGTGTCTGCAAAAGTCTCCTCTGCTG...TGGGAAAAGCTGTGTTGATGTTTTGGGAGACAGACAAGGCTGTGAACCCACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR CCA 72 bp | AATTGCTCCATGGGCTCATTCTGCAGTCTATCGGTATaGGATAGTGTTGTTCTTGTTCTTCTCCAGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NCSMGSFCSLSV*DSVVLVLLQQR Trigger: CCTCTGCTGGAGAAGAACAAGAACAACACTATCCCATACCGATAGACTGCAGAATGAGCCCATGGAGCAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR CCA 72 bp | TTCCACAGTTTTCCTGTATCTCTTCACACTCCTGGGTaGGTTCACAGCCTTGTCTGTCTCCCAAAACATCAA | + |
|
Preference number: 3 (lower is better) Translates to: FHSFPVSLHTPG*VHSLVCLPKHQ Trigger: TTGATGTTTTGGGAGACAGACAAGGCTGTGAACCCACCCAGGAGTGTGAAGAGATACAGGAAAACTGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR CCA 72 bp | TCATTTCCACAGTTTTCCTGTATCTCTTCACACTCCTaGGTGGGTTCACAGCCTTGTCTGTCTCCCAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: SFPQFSCISSHS*VGSQPCLSPKT Trigger: TGTTTTGGGAGACAGACAAGGCTGTGAACCCACCCAGGAGTGTGAAGAGATACAGGAAAACTGTGGAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR GCA 72 bp | GATCACACTCTGACCAATTGCTCCATGGGCTCATTCTaGAGTCTATCGGTATGGGATAGTGTTGTTCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: DHTLTNCSMGSF*SLSVWDSVVLV Trigger: AACAAGAACAACACTATCCCATACCGATAGACTGCAGAATGAGCCCATGGAGCAATTGGTCAGAGTGTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR GCA 72 bp | AGTCGTTGTCACCATTACACAGAAGTCTCCTCTTTATaGACCTGCCTGTCTCACACTGAAAGTCATTTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SRCHHYTEVSSL*TCLSHTESHFH Trigger: GTGGAAATGACTTTCAGTGTGAGACAGGCAGGTGCATAAAGAGGAGACTTCTGTGTAATGGTGACAACGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR TCA 72 bp | AGAAGTCTCCTCTTTATGCACCTGCCTGTCTCACACTaGAAGTCATTTCCACAGTTTTCCTGTATCTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RSLLFMHLPVSH*KSFPQFSCISS Trigger: TGAAGAGATACAGGAAAACTGTGGAAATGACTTTCAGTGTGAGACAGGCAGGTGCATAAAGAGGAGACTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| CDS-3UTR TCA 90 bp | CGGGAGATTGGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCACTGCTGTTGGCATCTGTGCATTaGCACCCAAGGCAAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: REIGIACGKRQPGHISLLLASVH*HPRQRW Trigger: CCATCTTTGCCTTGGGTGTCAATGCACAGATGCCAA...CAGCAGTGAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCCAATCTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR TCA 90 bp | GGAGATTGGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCACTGCTGACTTTCCCCCTTCCATGTaGACCAGGGTTTGCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GDWHCLWEKAARAYLTADFPPSM*TRVCFV Trigger: AACAAAGCAAACCCTGGTTCACATGGAAGGGGGAAA...GTCAGCAGTGAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCCAATCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147905.2 |
||
| CDS-3UTR GCA 90 bp | TGGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCACTGCTGACTCTTCACACACTCTGACCAATTaGTCCATGGGCTCATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WHCLWEKAARAYLTADSSHTLTN*SMGSFC Trigger: GCAGAATGAGCCCATGGAGCAATTGGTCAGAGTGTG...TGAAGAGTCAGCAGTGAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR GCA 90 bp | GGGATAGTGTTGTTCTTGTTCTTCTCCAGCAGAGGAGACTTTTGCAGACACAATCCATGCCTGAGGCCATaGTGCTCCTCCTGGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GIVLFLFFSSRGDFCRHNPCLRP*CSSWGA Trigger: GGCTCCCCAGGAGGAGCAGCATGGCCTCAGGCATGG...ATTGTGTCTGCAAAAGTCTCCTCTGCTGGAGAAGAACAAGAACAACACTATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| CDS-3UTR CCA 90 bp | ATTGGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCACTGCTGACTCTTGGGACGAGGCCCAGTTaGCGAAGTCAGTCTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: IGIACGKRQPGHISLLTLGTRPS*RSQSYQ Trigger: TTGATAAGACTGACTTCGCCAACTGGGCCTCGTCCC...AAGAGTCAGCAGTGAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000147905.2 |
||
| CDS-3UTR TCA 90 bp | GGCAAGGATCACACTCTGACCAATTGCTCCATGGGCTCATTCTGCAGTCTATCGTTGGCATCTGTGCATTaGCACCCAAGGCAAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GKDHTLTNCSMGSFCSLSLASVH*HPRQRW Trigger: CCATCTTTGCCTTGGGTGTCAATGCACAGATGCCAA...CGATAGACTGCAGAATGAGCCCATGGAGCAATTGGTCAGAGTGTGATCCTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| CDS-3UTR TCA 90 bp | AGGATTTCCATGAAACAAGCTGCTTTCCACTTGGCAGTGCGGATTAGCTCCAGGGCAAGGATCACACTCTaGCCAATTGCTCCATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RISMKQAAFHLAVRISSRARITL*PIAPWA Trigger: AGCCCATGGAGCAATTGGTCAGAGTGTGATCCTTGC...CCTGGAGCTAATCCGCACTGCCAAGTGGAAAGCAGCTTGTTTCATGGAAATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR GCA 90 bp | TGGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCACTGCTGACTCTTCAGTCCGAAGGCTAAAATaGTTCTTGAGCGAAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WHCLWEKAARAYLTADSSVRRLK*FLSETF Trigger: AAAGGTTTCGCTCAAGAAGCATTTTAGCCTTCGGAC...TGAAGAGTCAGCAGTGAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR GCA 90 bp | ATTGGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCACTGCTGACTCTTTCCTCTTTATGCACCTaGCTGTCTCACACTGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IGIACGKRQPGHISLLTLSSLCT*LSHTES Trigger: ACTTTCAGTGTGAGACAGGCAGGTGCATAAAGAGGA...AAGAGTCAGCAGTGAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR GCA 90 bp | GGTAGGATTTCCATGAAACAAGCTGCTTTCCACTTGGCAGTGCGGATTAGCTCCCTCTTTCAGGAGAATTaGTTGCTCCCTAGTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRISMKQAAFHLAVRISSLFQEN*LLPSPS Trigger: GGAGGGACTAGGGAGCAAGCAATTCTCCTGAAAGAG...GGAGCTAATCCGCACTGCCAAGTGGAAAGCAGCTTGTTTCATGGAAATCCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000147905.2 |
||
| CDS-3UTR GCA 90 bp | AGGATTTCCATGAAACAAGCTGCTTTCCACTTGGCAGTGCGGATTAGCTCCAGGCTCTTTCAGGAGAATTaGTTGCTCCCTAGTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RISMKQAAFHLAVRISSRLFQEN*LLPSPS Trigger: GGAGGGACTAGGGAGCAAGCAATTCTCCTGAAAGAG...CCTGGAGCTAATCCGCACTGCCAAGTGGAAAGCAGCTTGTTTCATGGAAATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000147905.2 |
||
| 3UTR CAA 72 bp | CTGTATCTCTTCACACTCCTGGGTGGGTTCACAGCCTaGTCTGTCTCCCAAAACATCAACACAGCTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LYLFTLLGGFTA*SVSQNINTAFP Trigger: GGGAAAAGCTGTGTTGATGTTTTGGGAGACAGACAAGGCTGTGAACCCACCCAGGAGTGTGAAGAGATACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| CDS-3UTR GCA 90 bp | GGTAGGATTTCCATGAAACAAGCTGCTTTCCACTTGGCAGTGCGGATTAGCTCCCAGGAGCACAGGCACTaGCCATCCAGAAGAATTATA | + |
|
Preference number: 4 (lower is better) Translates to: GRISMKQAAFHLAVRISSQEHRH*PSRRII Trigger: TATAATTCTTCTGGATGGGCAGTGCCTGTGCTCCTG...GGAGCTAATCCGCACTGCCAAGTGGAAAGCAGCTTGTTTCATGGAAATCCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR CCA 90 bp | TTATTAGCGGGAGATTGGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCGTTCTTGTTCTTCTCTaGAAACGGGTATTGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLAGDWHCLWEKAARAYLVLVLL*KRVLAS Trigger: AGATGCCAATACCCGTTTCCAGAGAAGAACAAGAAC...GAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCCAATCTCCCGCTAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGGAGAAAGGCACTGTAGATTAAAACAGACAGCATCAGAGGTTGGTAGGCTTCACACTCCTGGGTaGGTTCACAGCCTTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRGERHCRLKQTASEVGRLHTPG*VHSLVC Trigger: ACAGACAAGGCTGTGAACCCACCCAGGAGTGTGAAG...CCTACCAACCTCTGATGCTGTCTGTTTTAATCTACAGTGCCTTTCTCCCCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR TCA 90 bp | TTATTAGCGGGAGATTGGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCCATAGTTCTCAGTTCTaGAACTTTTATCAGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLAGDWHCLWEKAARAYLHSSQF*NFYQPW Trigger: CCAAGGCTGATAAAAGTTTCAGAACTGAGAACTATG...GAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCCAATCTCCCGCTAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR GCA 90 bp | AAGAGGGGAGAAAGGCACTGTAGATTAAAACAGACAGCATCAGAGGTTGGTAGGGAAGTCTCCTCTTTATaGACCTGCCTGTCTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: KRGERHCRLKQTASEVGREVSSL*TCLSHT Trigger: AGTGTGAGACAGGCAGGTGCATAAAGAGGAGACTTC...CCTACCAACCTCTGATGCTGTCTGTTTTAATCTACAGTGCCTTTCTCCCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| 3UTR CAA 72 bp | TGGGCTCATTCTGCAGTCTATCGGTATGGGATAGTGTaGTTCTTGTTCTTCTCCAGCAGAGGAGACTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WAHSAVYRYGIV*FLFFSSRGDFC Trigger: GCAAAAGTCTCCTCTGCTGGAGAAGAACAAGAACAACACTATCCCATACCGATAGACTGCAGAATGAGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR CAA 72 bp | AACCTTTGTTTGAGGCAAGGATCACACTCTGACCAATaGCTCCATGGGCTCATTCTGCAGTCTATCGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: NLCLRQGSHSDQ*LHGLILQSIGM Trigger: CATACCGATAGACTGCAGAATGAGCCCATGGAGCAATTGGTCAGAGTGTGATCCTTGCCTCAAACAAAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| CDS-3UTR CCA 90 bp | AGGATTTCCATGAAACAAGCTGCTTTCCACTTGGCAGTGCGGATTAGCTCCAGGTGCAGTCTATCGGTATaGGATAGTGTTGTTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RISMKQAAFHLAVRISSRCSLSV*DSVVLV Trigger: AACAAGAACAACACTATCCCATACCGATAGACTGCA...CCTGGAGCTAATCCGCACTGCCAAGTGGAAAGCAGCTTGTTTCATGGAAATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| 3UTR CAA 72 bp | CATTCTGCAGTCTATCGGTATGGGATAGTGTTGTTCTaGTTCTTCTCCAGCAGAGGAGACTTTTGCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: HSAVYRYGIVLF*FFSSRGDFCRH Trigger: GTGTCTGCAAAAGTCTCCTCTGCTGGAGAAGAACAAGAACAACACTATCCCATACCGATAGACTGCAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| CDS-3UTR TCA 90 bp | GAAAAGGCAGCCCGGGCATATCTCACTGCTGACTCTTCATTAGGGAATGAAAAAAATGTTTGTAGGTTTTaGAGAGTGTTCTGCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EKAARAYLTADSSLGNEKNVCRF*RVFCWG Trigger: TCCCCAGCAGAACACTCTTCAAAACCTACAAACATT...TTTTTCATTCCCTAATGAAGAGTCAGCAGTGAGATATGCCCGGGCTGCCTTTTC 44% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR TCA 90 bp | AGGCACTGTAGATTAAAACAGACAGCATCAGAGGTTGGTAGGATTTCCATGAAAATAGGGGACATTCTTTaGCTGATGAGAGCTGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RHCRLKQTASEVGRISMKIGDIL*LMRAGA Trigger: CGCTCCAGCTCTCATCAGTCAAAGAATGTCCCCTAT...TTTCATGGAAATCCTACCAACCTCTGATGCTGTCTGTTTTAATCTACAGTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR TCA 90 bp | GAAAGGCACTGTAGATTAAAACAGACAGCATCAGAGGTTGGTAGGATTTCCATGTGCTTTGTTTCTCTTTaGCTGATGAGAGCTGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ERHCRLKQTASEVGRISMCFVSL*LMRAGA Trigger: CGCTCCAGCTCTCATCAGTCAAAGAGAAACAAAGCA...CATGGAAATCCTACCAACCTCTGATGCTGTCTGTTTTAATCTACAGTGCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147905.2 |
||
| CDS-3UTR GCA 90 bp | GAAAAGGCAGCCCGGGCATATCTCACTGCTGACTCTTCATTAGGGAATGAAAAAACCACTCCTCTCAAGTaGACAAACATCTTTTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: EKAARAYLTADSSLGNEKTTPLK*TNIFFD Trigger: GTCGAAAAAGATGTTTGTGCACTTGAGAGGAGTGGT...TTTTTCATTCCCTAATGAAGAGTCAGCAGTGAGATATGCCCGGGCTGCCTTTTC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGGAGAAAGGCACTGTAGATTAAAACAGACAGCATCAGAGGTTGGTAGGCACCTTTCTCTTTCATaGAAGCTTTATCCAAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: KRGERHCRLKQTASEVGRHLSLS*KLYPRH Trigger: ATGTCTTGGATAAAGCTTCCATGAAAGAGAAAGGTG...CCTACCAACCTCTGATGCTGTCTGTTTTAATCTACAGTGCCTTTCTCCCCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR CCA 90 bp | TCTTGTTCTTCTCCAGCAGAGGAGACTTTTGCAGACACAATTCTTTGCTTTTTACATTACTTCTGGCTCTaGAAACGGGTATTGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SCSSPAEETFADTILCFLHYFWL*KRVLAS Trigger: AGATGCCAATACCCGTTTCCAGAGCCAGAAGTAATG...TAAAAAGCAAAGAATTGTGTCTGCAAAAGTCTCCTCTGCTGGAGAAGAACAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| 3UTR CAA 72 bp | TTCTCCAGCAGAGGAGACTTTTGCAGACACAATTCTTaGCTTTTTAGTAGAATCATTCTAGAGCCATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSSRGDFCRHNS*LFSRIILEPWD Trigger: ATCCCATGGCTCTAGAATGATTCTACTAAAAAGCAAAGAATTGTGTCTGCAAAAGTCTCCTCTGCTGGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| CDS-3UTR CAA 90 bp | CGGGAGATTGGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCACTGCTGTTTCAGGAGAATTGCTaGCTCCCTAGTCCCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: REIGIACGKRQPGHISLLFQENC*LPSPSS Trigger: AGAGGAGGGACTAGGGAGCAAGCAATTCTCCTGAAA...CAGCAGTGAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCCAATCTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000147905.2 |
||
| CDS-3UTR CAA 90 bp | ATTGGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCACTGCTGACTCTTGGTGGGTTCACAGCCTaGTCTGTCTCCCAAAACATC | + |
|
Preference number: 5 (lower is better) Translates to: IGIACGKRQPGHISLLTLGGFTA*SVSQNI Trigger: GATGTTTTGGGAGACAGACAAGGCTGTGAACCCACC...AAGAGTCAGCAGTGAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR CAA 90 bp | CGGGAGATTGGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCACTGCTGATAGACAATTTCATATaGTCCTCCCAGGGACCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: REIGIACGKRQPGHISLLIDNFI*SSQGPR Trigger: TCTGGGTCCCTGGGAGGACAATATGAAATTGTCTAT...CAGCAGTGAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCCAATCTCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR CAA 90 bp | GGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCACTGCTGACTCTTCATTATAGGGGACATTCTTaGACTGATGAGAGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GIACGKRQPGHISLLTLHYRGHS*TDESWS Trigger: GCTCCAGCTCTCATCAGTCAAAGAATGTCCCCTATA...ATGAAGAGTCAGCAGTGAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR CAA 90 bp | TTATTAGCGGGAGATTGGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCGGGATAGTGTTGTTCTaGTTCTTCTCTGGAAACGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLAGDWHCLWEKAARAYLGIVLF*FFSGNG Trigger: CCCGTTTCCAGAGAAGAACAAGAACAACACTATCCC...GAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCCAATCTCCCGCTAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR CAA 90 bp | TGGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCACTGCTGACTCTTCACGGTATGGGATAGTGTaGTTCTTGTTCTTCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WHCLWEKAARAYLTADSSRYGIV*FLFFSG Trigger: TCCAGAGAAGAACAAGAACAACACTATCCCATACCG...TGAAGAGTCAGCAGTGAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR CAA 90 bp | CGGGAGATTGGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCACTGCTGGTCTTATCAAATGTCTaGTCTCCTCTGAGAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: REIGIACGKRQPGHISLLVLSNV*SPLRIF Trigger: GAAGATTCTCAGAGGAGACAAGACATTTGATAAGAC...CAGCAGTGAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCCAATCTCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000147905.2 |
||
| CDS GCA 90 bp | CAGGGTTTGCTTTGTTTCTCTTTGACTGATGAGAGCTGGAGCGTTTaGCAGGGACGAGGCCCAGTTGGCGAAGTCAGTCTTATCAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: QGLLCFSLTDESWSV*QGRGPVGEVSLIKC Trigger: ACATTTGATAAGACTGACTTCGCCAACTGGGCCTCGTCCCTGGCAAACGCTCCAGCTCTCATCAGTCAAAGAGAAACAAAGCAAACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147905.2 |
||
| CDS-3UTR CAA 90 bp | GGAGATTGGCATTGCCTGTGGGAAAAGGCAGCCCGGGCATATCTCACTGCTGACGTCTTATCAAATGTCTaGTCTCCTCTGAGAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GDWHCLWEKAARAYLTADVLSNV*SPLRIF Trigger: GAAGATTCTCAGAGGAGACAAGACATTTGATAAGAC...GTCAGCAGTGAGATATGCCCGGGCTGCCTTTTCCCACAGGCAATGCCAATCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000147905.2 |
||
| CDS CCA 90 bp | AGGAATGAGATTATATATAGGGGACATTCTTTGACTGATGAGAGCTaGAGCGTTTGCCAGGGACGAGGCCCAGTTGGCGAAGTCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RNEIIYRGHSLTDES*SVCQGRGPVGEVSL Trigger: AAGACTGACTTCGCCAACTGGGCCTCGTCCCTGGCAAACGCTCCAGCTCTCATCAGTCAAAGAATGTCCCCTATATATAATCTCATTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000239466.2 |
||
| CDS-3UTR CAA 90 bp | GGGTGGGTTCACAGCCTTGTCTGTCTCCCAAAACATCAACACAGCTTTTCCCATATTGGCATCTGTGCATaGACACCCAAGGCAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: GWVHSLVCLPKHQHSFSHIGICA*TPKAKM Trigger: CATCTTTGCCTTGGGTGTCAATGCACAGATGCCAAT...ATGGGAAAAGCTGTGTTGATGTTTTGGGAGACAGACAAGGCTGTGAACCCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128097.3 |
||
| CDS CCA 90 bp | GACCTCAGCACAACATCCCGATTCCTCATTACAAATCTCCCCAGTTaGACCACTCCTCTCAAGTGCACAAACATCTTTTTCGACTGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: DLSTTSRFLITNLPS*TTPLKCTNIFFDCE Trigger: TTCGCAGTCGAAAAAGATGTTTGTGCACTTGAGAGGAGTGGTCCAACTGGGGAGATTTGTAATGAGGAATCGGGATGTTGTGCTGAGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000239466.2 |
||
| CDS-3UTR CAA 90 bp | GAAAAGGCAGCCCGGGCATATCTCACTGCTGACTCTTCATTAGGGAATGAAAAATTTCAGGAGAATTGCTaGCTCCCTAGTCCCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: EKAARAYLTADSSLGNEKFQENC*LPSPSS Trigger: AGAGGAGGGACTAGGGAGCAAGCAATTCTCCTGAAA...TTTTTCATTCCCTAATGAAGAGTCAGCAGTGAGATATGCCCGGGCTGCCTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000147905.2 |
||
| CDS GCA 90 bp | ATTATATATAGGGGACATTCTTTGACTGATGAGAGCTGGAGCGTTTaGCAGGGACGAGGCCCAGTTGGCGAAGTCAGTCTTATCAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: IIYRGHSLTDESWSV*QGRGPVGEVSLIKC Trigger: ACATTTGATAAGACTGACTTCGCCAACTGGGCCTCGTCCCTGGCAAACGCTCCAGCTCTCATCAGTCAAAGAATGTCCCCTATATATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000239466.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGGCACTGTAGATTAAAACAGACAGCATCAGAGGTTGGTAGGATTTCCATGTACAAATCTCCCCAGTaGGACCACTCCTCTCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ERHCRLKQTASEVGRISMYKSPQ*DHSSQV Trigger: CACTTGAGAGGAGTGGTCCAACTGGGGAGATTTGTA...CATGGAAATCCTACCAACCTCTGATGCTGTCTGTTTTAATCTACAGTGCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS GCA 90 bp | TATCAGCCTTGGTTTCATAGATCAGAGAAACTACATTCCAAGGTTTaGGATAGTATGTCTTTTCGTCTCGTACCCGGTCACAGAGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: YQPWFHRSEKLHSKV*DSMSFRLVPGHRVR Trigger: ACGGACTCTGTGACCGGGTACGAGACGAAAAGACATACTATCGCAAACCTTGGAATGTAGTTTCTCTGATCTATGAAACCAAGGCTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000239466.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGGCACTGTAGATTAAAACAGACAGCATCAGAGGTTGGTAGGATTTCCATGGAGGTCTTCTCTCGGTaGATGGCTTTGAATACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ERHCRLKQTASEVGRISMEVFSR*MALNTS Trigger: GGAAGTATTCAAAGCCATCAACCGAGAGAAGACCTC...CATGGAAATCCTACCAACCTCTGATGCTGTCTGTTTTAATCTACAGTGCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS-3UTR CAA 90 bp | GAAAAGGCAGCCCGGGCATATCTCACTGCTGACTCTTCATTAGGGAATGAAAAACATGTGAACCAGGGTTaGCTTTGTTTCTCTTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: EKAARAYLTADSSLGNEKHVNQG*LCFSLT Trigger: AGTCAAAGAGAAACAAAGCAAACCCTGGTTCACATG...TTTTTCATTCCCTAATGAAGAGTCAGCAGTGAGATATGCCCGGGCTGCCTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147905.2 |
||
| CDS-3UTR CAA 90 bp | AGGCACTGTAGATTAAAACAGACAGCATCAGAGGTTGGTAGGATTTCCATGAAAATTGGCATCTGTGCATaGACACCCAAGGCAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RHCRLKQTASEVGRISMKIGICA*TPKAKM Trigger: CATCTTTGCCTTGGGTGTCAATGCACAGATGCCAAT...TTTCATGGAAATCCTACCAACCTCTGATGCTGTCTGTTTTAATCTACAGTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022749.17 |
||
| CDS TCA 90 bp | CTCTTTCAGGAGAATTGCTTGCTCCCTAGTCCCTCCTCTTATGAATaGAATGACATCATCTATGATGTTATCGCGGGTGATGTTTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LFQENCLLPSPSSYE*NDIIYDVIAGDVYS Trigger: ACTGTAAACATCACCCGCGATAACATCATAGATGATGTCATTTCATTCATAAGAGGAGGGACTAGGGAGCAAGCAATTCTCCTGAAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022749.17 ENSMUST00000147905.2 ENSMUST00000239466.2 |
||
| CDS CCA 90 bp | CAAGACAATGTTTTACATCATTCAGGTCAACACCTTTCTCTTTCATaGAAGCTTTATCCAAGACATAGACAATTTCATATTGTCCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QDNVLHHSGQHLSLS*KLYPRHRQFHIVLP Trigger: TGGGAGGACAATATGAAATTGTCTATGTCTTGGATAAAGCTTCCATGAAAGAGAAAGGTGTTGACCTGAATGATGTAAAACATTGTCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000239466.2 |
||
| CDS GCA 72 bp | AGGGGACATTCTTTGACTGATGAGAGCTGGAGCGTTTaGCAGGGACGAGGCCCAGTTGGCGAAGTCAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RGHSLTDESWSV*QGRGPVGEVSL Trigger: AAGACTGACTTCGCCAACTGGGCCTCGTCCCTGGCAAACGCTCCAGCTCTCATCAGTCAAAGAATGTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000239466.2 |
||
| CDS CCA 72 bp | CAGGGTTTGCTTTGTTTCTCTTTGACTGATGAGAGCTaGAGCGTTTGCCAGGGACGAGGCCCAGTTGGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: QGLLCFSLTDES*SVCQGRGPVGE Trigger: TTCGCCAACTGGGCCTCGTCCCTGGCAAACGCTCCAGCTCTCATCAGTCAAAGAGAAACAAAGCAAACCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147905.2 |
||
| CDS GCA 72 bp | CTTTGTTTCTCTTTGACTGATGAGAGCTGGAGCGTTTaGCAGGGACGAGGCCCAGTTGGCGAAGTCAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LCFSLTDESWSV*QGRGPVGEVSL Trigger: AAGACTGACTTCGCCAACTGGGCCTCGTCCCTGGCAAACGCTCCAGCTCTCATCAGTCAAAGAGAAACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147905.2 |
||
| CDS CAA 72 bp | ATGAGAGCTGGAGCGTTTGCCAGGGACGAGGCCCAGTaGGCGAAGTCAGTCTTATCAAATGTCTTGTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: MRAGAFARDEAQ*AKSVLSNVLSP Trigger: AGGAGACAAGACATTTGATAAGACTGACTTCGCCAACTGGGCCTCGTCCCTGGCAAACGCTCCAGCTCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022749.17 ENSMUST00000147905.2 ENSMUST00000239466.2 |
||
| CDS CCA 72 bp | TTGATGGATTTCGCAGGCCATTCCCCTAAACATCATTaGGCAGGAGCACAGGCACTGCCCATCCAGAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LMDFAGHSPKHH*AGAQALPIQKN Trigger: ATTCTTCTGGATGGGCAGTGCCTGTGCTCCTGCCCAATGATGTTTAGGGGAATGGCCTGCGAAATCCATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000239466.2 |
||
| CDS CAA 72 bp | CCCTTCCATGTGAACCAGGGTTTGCTTTGTTTCTCTTaGACTGATGAGAGCTGGAGCGTTTGCCAGGGACGA | + |
|
Preference number: 6 (lower is better) Translates to: PFHVNQGLLCFS*TDESWSVCQGR Trigger: TCGTCCCTGGCAAACGCTCCAGCTCTCATCAGTCAAAGAGAAACAAAGCAAACCCTGGTTCACATGGAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147905.2 |
||
| CDS CAA 90 bp | GCCAGGGACGAGGCCCAGTTGGCGAAGTCAGTCTTATCAAATGTCTaGTCTCCTCTGAGAATCTTCTCTTTCAGGAGAATTGCTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ARDEAQLAKSVLSNV*SPLRIFSFRRIACS Trigger: GGAGCAAGCAATTCTCCTGAAAGAGAAGATTCTCAGAGGAGACAAGACATTTGATAAGACTGACTTCGCCAACTGGGCCTCGTCCCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022749.17 ENSMUST00000147905.2 ENSMUST00000239466.2 |
||
| CDS CAA 90 bp | TGTTGTTCTTGTTCTTCTCTGGAAACGGGTATTGGCATCTGTGCATaGACACCCAAGGCAAAGATGGCAAGGGCTAAGGTGATGGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: CCSCSSLETGIGICA*TPKAKMARAKVMAM Trigger: CATGGCCATCACCTTAGCCCTTGCCATCTTTGCCTTGGGTGTCAATGCACAGATGCCAATACCCGTTTCCAGAGAAGAACAAGAACAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000239466.2 |
||
| CDS CAA 90 bp | CCATGGGCTCATTCTGCAGTCTATCGGTATGGGATAGTGTTGTTCTaGTTCTTCTCTGGAAACGGGTATTGGCATCTGTGCATTGACACC | + |
|
Preference number: 6 (lower is better) Translates to: PWAHSAVYRYGIVLF*FFSGNGYWHLCIDT Trigger: GGTGTCAATGCACAGATGCCAATACCCGTTTCCAGAGAAGAACAAGAACAACACTATCCCATACCGATAGACTGCAGAATGAGCCCATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000239466.2 |
||
| CDS GCA 72 bp | ATTCCCCTAAACATCATTGGGCAGGAGCACAGGCACTaGCCATCCAGAAGAATTATAGTACCTCCATTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: IPLNIIGQEHRH*PSRRIIVPPFR Trigger: TCTAAATGGAGGTACTATAATTCTTCTGGATGGGCAGTGCCTGTGCTCCTGCCCAATGATGTTTAGGGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000239466.2 |
||
| CDS CCA 72 bp | ATAGTGTTGTTCTTGTTCTTCTCTGGAAACGGGTATTaGCATCTGTGCATTGACACCCAAGGCAAAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: IVLFLFFSGNGY*HLCIDTQGKDG Trigger: GCCATCTTTGCCTTGGGTGTCAATGCACAGATGCCAATACCCGTTTCCAGAGAAGAACAAGAACAACACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000239466.2 |
||
| CDS CAA 72 bp | TGGGCTCATTCTGCAGTCTATCGGTATGGGATAGTGTaGTTCTTGTTCTTCTCTGGAAACGGGTATTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: WAHSAVYRYGIV*FLFFSGNGYWH Trigger: ATGCCAATACCCGTTTCCAGAGAAGAACAAGAACAACACTATCCCATACCGATAGACTGCAGAATGAGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000239466.2 |
||
| CDS TCA 72 bp | TTCAAAGGAATGAGATTATATATAGGGGACATTCTTTaGCTGATGAGAGCTGGAGCGTTTGCCAGGGACGAG | + |
|
Preference number: 6 (lower is better) Translates to: FKGMRLYIGDIL*LMRAGAFARDE Trigger: CTCGTCCCTGGCAAACGCTCCAGCTCTCATCAGTCAAAGAATGTCCCCTATATATAATCTCATTCCTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000239466.2 |
||
| CDS CCA 72 bp | ACAACATCCCGATTCCTCATTACAAATCTCCCCAGTTaGACCACTCCTCTCAAGTGCACAAACATCTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: TTSRFLITNLPS*TTPLKCTNIFF Trigger: GAAAAAGATGTTTGTGCACTTGAGAGGAGTGGTCCAACTGGGGAGATTTGTAATGAGGAATCGGGATGTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000239466.2 |
||
| CDS CAA 72 bp | GAGGCCCAGTTGGCGAAGTCAGTCTTATCAAATGTCTaGTCTCCTCTGAGAATCTTCTCTTTCAGGAGAATT | + |
|
Preference number: 6 (lower is better) Translates to: EAQLAKSVLSNV*SPLRIFSFRRI Trigger: AATTCTCCTGAAAGAGAAGATTCTCAGAGGAGACAAGACATTTGATAAGACTGACTTCGCCAACTGGGCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022749.17 ENSMUST00000147905.2 ENSMUST00000239466.2 |
||
| CDS GCA 72 bp | TCTCCTCTGAGAATCTTCTCTTTCAGGAGAATTGCTTaGTCCCTAGTCCCTCCTCTTATGAATGAAATGACA | + |
|
Preference number: 6 (lower is better) Translates to: SPLRIFSFRRIA*SLVPPLMNEMT Trigger: TGTCATTTCATTCATAAGAGGAGGGACTAGGGAGCAAGCAATTCTCCTGAAAGAGAAGATTCTCAGAGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022749.17 ENSMUST00000147905.2 ENSMUST00000239466.2 |
||
| CDS CAA 72 bp | AGGAAGTTGGTAGAGCTTTTACATCATCCAGGAAAGTaGACCTCAGCACAACATCCCGATTCCTCATTACAA | + |
|
Preference number: 6 (lower is better) Translates to: RKLVELLHHPGK*TSAQHPDSSLQ Trigger: TTGTAATGAGGAATCGGGATGTTGTGCTGAGGTCAACTTTCCTGGATGATGTAAAAGCTCTACCAACTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022749.17 ENSMUST00000239466.2 |
||