Pregenerated sensors for C8A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035031Ensembl transcript IDs: ENSMUST00000048947.15, ENSMUST00000064873.9, ENSMUST00000106808.10
Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAAGTTGGCCAGCAGTGCCCCTCCATGATCGCTGCTTCAGTTCCTaGCTCCAGGTTCCTGCCTTGAATTCCTGCCCTGACTTCCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: GSWPAVPLHDRCFSS*LQVPALNSCPDFPS Trigger: TGAAGGGAAGTCAGGGCAGGAATTCAAGGCAGGAACCTGGAGGCAGGAACTGAAGCAGCGATCATGGAGGGGCACTGCTGGCCAACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR TCA 90 bp | TTGATTGCTTACCAAGAAGAGAATCACAGGGGATGGTCTGGGGTCTaGATGCTGGGATTTCTAAGTTCTCCACATGGAAGCCCTCTACCC | + |
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Preference number: 1 (lower is better) Translates to: LIAYQEENHRGWSGV*MLGFLSSPHGSPLP Trigger: GGGTAGAGGGCTTCCATGTGGAGAACTTAGAAATCCCAGCATTCAGACCCCAGACCATCCCCTGTGATTCTCTTCTTGGTAAGCAATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR TCA 90 bp | GCTCTTTTCGGGAAGGTCAGGGAATGGACGTTGATCTTTATTGATTaGCCCTTCCAAGTCCACCTACAGTTCTGGGAGGTTGGCCAATAC | + |
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Preference number: 1 (lower is better) Translates to: ALFGKVREWTLIFID*PFQVHLQFWEVGQY Trigger: GTATTGGCCAACCTCCCAGAACTGTAGGTGGACTTGGAAGGGTCAATCAATAAAGATCAACGTCCATTCCCTGACCTTCCCGAAAAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR TCA 90 bp | AAGCCCTCTACCCAGTGTGGAAAGAGGAGGCTGGACTTTGAGAGATaGCAAAGTCATAAAGGCAAAGTTCTCATGAGTAGGACTAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: KPSTQCGKRRLDFER*QSHKGKVLMSRTSA Trigger: GGCACTAGTCCTACTCATGAGAACTTTGCCTTTATGACTTTGTCATCTCTCAAAGTCCAGCCTCCTCTTTCCACACTGGGTAGAGGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR CCA 90 bp | GTGTGCAGACTGCATTTTCTGACTTGTCCTCCCTCAGCAGTCACTTaGATGCTACATATGTTGATGTTAATAATTTACTCCCAGTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: VCRLHFLTCPPSAVT*MLHMLMLIIYSQWP Trigger: GGGCCACTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAAGTGACTGCTGAGGGAGGACAAGTCAGAAAATGCAGTCTGCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR GCA 90 bp | CCTCTCCAGACCCTAGACCTTCTGGAACCTTCATCTCTCAGTATATaGTTCCAGAATTGTGAGGAATACATTCTGATGTATCTAAACCAT | + |
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Preference number: 1 (lower is better) Translates to: PLQTLDLLEPSSLSI*FQNCEEYILMYLNH Trigger: ATGGTTTAGATACATCAGAATGTATTCCTCACAATTCTGGAAGCATATACTGAGAGATGAAGGTTCCAGAAGGTCTAGGGTCTGGAGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR CCA 90 bp | GGGAATAACAATGATGATGCTAATAATTTGCCATGTGGTAGGCACTaGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTT | + |
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Preference number: 1 (lower is better) Translates to: GNNNDDANNLPCGRH*NTFHTPSFFVFRHF Trigger: AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCAAATTATTAGCATCATCATTGTTATTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGGTGGTATTGGGTGATCCAAGAGAGCAGGCTGAGAAAACCATGAGGAGGCGCTGCTTCAGTTCCTaGCTCCAGGTTCCTGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: GQVVLGDPREQAEKTMRRRCFSS*LQVPAL Trigger: CAAGGCAGGAACCTGGAGGCAGGAACTGAAGCAGCG...CCTCCTCATGGTTTTCTCAGCCTGCTCTCTTGGATCACCCAATACCACCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR CCA 90 bp | GATCGCTGCTTCAGTTCCTGCCTCCAGGTTCCTGCCTTGAATTCCTGCCCTGACAACAGGATAGAAAGGTaGTTCTGGGAAGTAAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: DRCFSSCLQVPALNSCPDNRIER*FWEVKG Trigger: GCCCTTTACTTCCCAGAACCACCTTTCTATCCTGTT...GTCAGGGCAGGAATTCAAGGCAGGAACCTGGAGGCAGGAACTGAAGCAGCGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR TCA 90 bp | TTAGTGATTGATGTTGGAGGACTCAGCTCACTCTGGGTGTTGCTATCCCTGGGCACCTCACCCATGAACTaGCTCTTGGTCTGTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: LVIDVGGLSSLWVLLSLGTSPMN*LLVCLL Trigger: AAGCAGACAGACCAAGAGTCAGTTCATGGGTGAGGT...GCCCAGGGATAGCAACACCCAGAGTGAGCTGAGTCCTCCAACATCAATCACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR TCA 90 bp | TGCAGACTGCATTTTCTGACTTGTCCTCCCTCAGCAGTCACTTGGATGCTACATCTAGGTTGGCTGGTGTaGCTGGCTCTTTTCGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: CRLHFLTCPPSAVTWMLHLGWLV*LALFGK Trigger: CTTCCCGAAAAGAGCCAGTCACACCAGCCAACCTAG...ATGTAGCATCCAAGTGACTGCTGAGGGAGGACAAGTCAGAAAATGCAGTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR GCA 90 bp | TGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCCCCCTCCATGATCGCTaGTTCAGTTCCTGCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: CHVVGTGTRFIHRLSLSFPLHDR*FSSCLQ Trigger: CTGGAGGCAGGAACTGAAGCAGCGATCATGGAGGGG...GAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR GCA 90 bp | GATAGAAAGGTGGTTCTGGGAAGTAAAGGGCAACAACTCCCTGGAACAAAGAGGACAGGTAACAGCATCTaGAGCCTCCTTGCCCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: DRKVVLGSKGQQLPGTKRTGNSI*SLLAQS Trigger: AGACTGGGCAAGGAGGCTGCAGATGCTGTTACCTGT...CCTCTTTGTTCCAGGGAGTTGTTGCCCTTTACTTCCCAGAACCACCTTTCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR TCA 90 bp | TGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCAGGCTGAGAAAACCATaGGGAGGAAGTTGGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: CHVVGTGTRFIHRLSLSFRLRKP*GGSWPA Trigger: TGCTGGCCAACTTCCTCCTCATGGTTTTCTCAGCCT...GAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR CAA 90 bp | TCTTTATTGATTGACCCTTCCAAGTCCACCTACAGTTCTGGGAGGTaGGCCAATACAGACCTCACCCATGAACTGACTCTTGGTCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SLLIDPSKSTYSSGR*ANTDLTHELTLGLS Trigger: AGACAGACCAAGAGTCAGTTCATGGGTGAGGTCTGTATTGGCCAACCTCCCAGAACTGTAGGTGGACTTGGAAGGGTCAATCAATAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR GCA 90 bp | GTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTACAGGTAACAGCATCTaGAGCCTCCTTGCCCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: VVGTGTRFIHRLSLSFVITGNSI*SLLAQS Trigger: AGACTGGGCAAGGAGGCTGCAGATGCTGTTACCTGT...AATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR GCA 90 bp | TTAGTGATTGATGTTGGAGGACTCAGCTCACTCTGGGTGTTGCTATCCCTGGGCACTGTGAGTGAGGCATaGAAGCTGAAGTTATTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LVIDVGGLSSLWVLLSLGTVSEA*KLKLFL Trigger: AAGGAATAACTTCAGCTTGCATGCCTCACTCACAGT...GCCCAGGGATAGCAACACCCAGAGTGAGCTGAGTCCTCCAACATCAATCACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR CCA 90 bp | ATAAAATGGAACACAGCCTCTCCAGACCCTAGACCTTCTGGAACCTTCATCTCTCCATGTGGTAGGCACTaGAACACGTTTCATACACCG | + |
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Preference number: 2 (lower is better) Translates to: IKWNTASPDPRPSGTFISPCGRH*NTFHTP Trigger: CGGTGTATGAAACGTGTTCCAGTGCCTACCACATGG...AGAGATGAAGGTTCCAGAAGGTCTAGGGTCTGGAGAGGCTGTGTTCCATTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR TCA 90 bp | GTATTGGGTGATCCAAGAGAGCAGGCTGAGAAAACCATGAGGAGGAAGTTGGCCTTGATCTTTATTGATTaGCCCTTCCAAGTCCACCTA | + |
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Preference number: 2 (lower is better) Translates to: VLGDPREQAEKTMRRKLALIFID*PFQVHL Trigger: TAGGTGGACTTGGAAGGGTCAATCAATAAAGATCAA...GGCCAACTTCCTCCTCATGGTTTTCTCAGCCTGCTCTCTTGGATCACCCAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR GCA 90 bp | AGGACTAGTGCCCTTACAAAAGAGGCCCTAGAGGCCCCTCTGCCATGTGATAACTCATCTCTCAGTATATaGTTCCAGAATTGTGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: RTSALTKEALEAPLPCDNSSLSI*FQNCEE Trigger: TTCCTCACAATTCTGGAAGCATATACTGAGAGATGA...GTTATCACATGGCAGAGGGGCCTCTAGGGCCTCTTTTGTAAGGGCACTAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR CAA 90 bp | CGTGTGCAGACTGCATTTTCTGACTTGTCCTCCCTCAGCAGTCACTaGGATGCTACATATGTTGATGTTAATAATTTACTCCCAGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RVQTAFSDLSSLSSH*DATYVDVNNLLPVA Trigger: GGCCACTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAAGTGACTGCTGAGGGAGGACAAGTCAGAAAATGCAGTCTGCACACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR TCA 90 bp | TGCAGACTGCATTTTCTGACTTGTCCTCCCTCAGCAGTCACTTGGATGCTACATCTGAAGATACTGTGCTaGATAAAACCAGGCCACTTT | + |
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Preference number: 2 (lower is better) Translates to: CRLHFLTCPPSAVTWMLHLKILC*IKPGHF Trigger: AAAGTGGCCTGGTTTTATTCAGCACAGTATCTTCAG...ATGTAGCATCCAAGTGACTGCTGAGGGAGGACAAGTCAGAAAATGCAGTCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR CAA 90 bp | TTTCTGACTTGTCCTCCCTCAGCAGTCACTTGGATGCTACATATGTaGATGTTAATAATTTACTCCCAGTGGCCCAAGAGCCTCCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: FLTCPPSAVTWMLHM*MLIIYSQWPKSLLF Trigger: AAAGAGGAGGCTCTTGGGCCACTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAAGTGACTGCTGAGGGAGGACAAGTCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR GCA 90 bp | TTGGATGCTACATATGTTGATGTTAATAATTTACTCCCAGTGGCCCAAGAGCCTGACTCTTGGTCTGTCTaGTTGTCCAGCAACCATTGC | + |
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Preference number: 2 (lower is better) Translates to: LDATYVDVNNLLPVAQEPDSWSV*LSSNHC Trigger: GCAATGGTTGCTGGACAAGCAGACAGACCAAGAGTC...AGGCTCTTGGGCCACTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR GCA 90 bp | CCCTCAGCAGTCACTTGGATGCTACATATGTTGATGTTAATAATTTACTCCCAGGACTCTTGGTCTGTCTaGTTGTCCAGCAACCATTGC | + |
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Preference number: 2 (lower is better) Translates to: PSAVTWMLHMLMLIIYSQDSWSV*LSSNHC Trigger: GCAATGGTTGCTGGACAAGCAGACAGACCAAGAGTC...CTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAAGTGACTGCTGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR GCA 90 bp | TGCAGACTGCATTTTCTGACTTGTCCTCCCTCAGCAGTCACTTGGATGCTACATGTACATTATTTAGAGTaGACTGGTACACTAGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: CRLHFLTCPPSAVTWMLHVHYLE*TGTLGW Trigger: CCAACCTAGTGTACCAGTGCACTCTAAATAATGTAC...ATGTAGCATCCAAGTGACTGCTGAGGGAGGACAAGTCAGAAAATGCAGTCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR CCA 90 bp | ATGCTGGGATTTCTAAGTTCTCCACATGGAAGCCCTCTACCCAGTGTGGAAAGAAGGACATATATAAAATaGAACACAGCCTCTCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: MLGFLSSPHGSPLPSVERRTYIK*NTASPD Trigger: GTCTGGAGAGGCTGTGTTCCATTTTATATATGTCCT...TCTTTCCACACTGGGTAGAGGGCTTCCATGTGGAGAACTTAGAAATCCCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR TCA 90 bp | TGCATCAGGCTGGATTTCTATTTCAAAAGTCTCCTCCATGTTGATCTGTTAAAAAGCAACCATTGCTGTTaGACTCCCCTACAGTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: CIRLDFYFKSLLHVDLLKSNHCC*TPLQSA Trigger: TGCAGACTGTAGGGGAGTTCAACAGCAATGGTTGCT...TTTTAACAGATCAACATGGAGGAGACTTTTGAAATAGAAATCCAGCCTGATGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR TCA 90 bp | TGCATCAGGCTGGATTTCTATTTCAAAAGTCTCCTCCATGTTGATCTGTTAAAATCCAAGAGAGCAGGCTaGGAAAACCATGAGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: CIRLDFYFKSLLHVDLLKSKRAG*ENHEEE Trigger: TTCCTCCTCATGGTTTTCTCAGCCTGCTCTCTTGGA...TTTTAACAGATCAACATGGAGGAGACTTTTGAAATAGAAATCCAGCCTGATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR TCA 90 bp | TGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCATAGTCTATCAACTTTaGAGAGAAGCCAGGGATAAA | + |
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Preference number: 2 (lower is better) Translates to: CHVVGTGTRFIHRLSLSFIVYQL*REARDK Trigger: TTTATCCCTGGCTTCTCTTCAAAGTTGATAGACTAT...GAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR TCA 90 bp | CCCTCAGCAGTCACTTGGATGCTACATATGTTGATGTTAATAATTTACTCCCAGGACGTTGATCTTTATTaGTTGACCCTTCCAAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: PSAVTWMLHMLMLIIYSQDVDLY*LTLPSP Trigger: TGGACTTGGAAGGGTCAATCAATAAAGATCAACGTC...CTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAAGTGACTGCTGAGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGGATTTCTATTTCAAAAGTCTCCTCCATGTTGATCTGTTAAAAAGTCCACTTGAATTCCTGCCCTaGCTTCCCTTCATGATAGAC | + |
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Preference number: 2 (lower is better) Translates to: RLDFYFKSLLHVDLLKSPLEFLP*LPFMID Trigger: GTCTATCATGAAGGGAAGTCAGGGCAGGAATTCAAG...TGGACTTTTTAACAGATCAACATGGAGGAGACTTTTGAAATAGAAATCCAGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR CCA 90 bp | CCCTCAGCAGTCACTTGGATGCTACATATGTTGATGTTAATAATTTACTCCCAGATAGAAAGGTGGTTCTaGGAAGTAAAGGGCAACAAC | + |
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Preference number: 2 (lower is better) Translates to: PSAVTWMLHMLMLIIYSQIERWF*EVKGNN Trigger: GTTGTTGCCCTTTACTTCCCAGAACCACCTTTCTAT...CTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAAGTGACTGCTGAGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR GCA 90 bp | TTGGATGCTACATATGTTGATGTTAATAATTTACTCCCAGTGGCCCAAGAGCCTATGATGCTAATAATTTaGCATGTGGTAGGCACTGGA | + |
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Preference number: 2 (lower is better) Translates to: LDATYVDVNNLLPVAQEPMMLII*HVVGTG Trigger: TCCAGTGCCTACCACATGGCAAATTATTAGCATCAT...AGGCTCTTGGGCCACTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR TCA 90 bp | CCCTCAGCAGTCACTTGGATGCTACATATGTTGATGTTAATAATTTACTCCCAGTTAAAAATTAGTGATTaGTGTTGGAGGACTCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: PSAVTWMLHMLMLIIYSQLKISD*CWRTQL Trigger: GAGCTGAGTCCTCCAACATCAATCACTAATTTTTAA...CTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAAGTGACTGCTGAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR CCA 90 bp | TTGGATGCTACATATGTTGATGTTAATAATTTACTCCCAGTGGCCCAAGAGCCTCAATGTGACACATTTTaGAAGGGGGAACTTCAATTA | + |
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Preference number: 2 (lower is better) Translates to: LDATYVDVNNLLPVAQEPQCDTF*KGELQL Trigger: TAATTGAAGTTCCCCCTTCCAAAATGTGTCACATTG...AGGCTCTTGGGCCACTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR TCA 90 bp | TGCATCAGGCTGGATTTCTATTTCAAAAGTCTCCTCCATGTTGATCTGTTAAAATTGATCTTTATTGATTaGCCCTTCCAAGTCCACCTA | + |
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Preference number: 2 (lower is better) Translates to: CIRLDFYFKSLLHVDLLKLIFID*PFQVHL Trigger: TAGGTGGACTTGGAAGGGTCAATCAATAAAGATCAA...TTTTAACAGATCAACATGGAGGAGACTTTTGAAATAGAAATCCAGCCTGATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR GCA 90 bp | TGCATCAGGCTGGATTTCTATTTCAAAAGTCTCCTCCATGTTGATCTGTTAAAAATGATGCTAATAATTTaGCATGTGGTAGGCACTGGA | + |
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Preference number: 2 (lower is better) Translates to: CIRLDFYFKSLLHVDLLKMMLII*HVVGTG Trigger: TCCAGTGCCTACCACATGGCAAATTATTAGCATCAT...TTTTAACAGATCAACATGGAGGAGACTTTTGAAATAGAAATCCAGCCTGATGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGGATTTCTATTTCAAAAGTCTCCTCCATGTTGATCTGTTAAAAAGTCCAAGGACATATATAAAATaGAACACAGCCTCTCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: RLDFYFKSLLHVDLLKSPRTYIK*NTASPD Trigger: GTCTGGAGAGGCTGTGTTCCATTTTATATATGTCCT...TGGACTTTTTAACAGATCAACATGGAGGAGACTTTTGAAATAGAAATCCAGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR GCA 72 bp | CCAGCAGTGCCCCTCCATGATCGCTGCTTCAGTTCCTaGCTCCAGGTTCCTGCCTTGAATTCCTGCCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: PAVPLHDRCFSS*LQVPALNSCPD Trigger: GTCAGGGCAGGAATTCAAGGCAGGAACCTGGAGGCAGGAACTGAAGCAGCGATCATGGAGGGGCACTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR GCA 72 bp | GGAGGAAGTTGGCCAGCAGTGCCCCTCCATGATCGCTaGTTCAGTTCCTGCCTCCAGGTTCCTGCCTTGAAT | + |
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Preference number: 3 (lower is better) Translates to: GGSWPAVPLHDR*FSSCLQVPALN Trigger: ATTCAAGGCAGGAACCTGGAGGCAGGAACTGAAGCAGCGATCATGGAGGGGCACTGCTGGCCAACTTCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR TCA 72 bp | TCTTGGTCTGTCTGCTTGTCCAGCAACCATTGCTGTTaGACTCCCCTACAGTCTGCAGTGCGTAGCCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: SWSVCLSSNHCC*TPLQSAVRSLS Trigger: GCTGAGGCTACGCACTGCAGACTGTAGGGGAGTTCAACAGCAATGGTTGCTGGACAAGCAGACAGACCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR CCA 72 bp | CTCAGCTCACTCTGGGTGTTGCTATCCCTGGGCAGGTaGTATTGGGTGATCCAAGAGAGCAGGCTGAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: LSSLWVLLSLGR*YWVIQESRLRK Trigger: TTTTCTCAGCCTGCTCTCTTGGATCACCCAATACCACCTGCCCAGGGATAGCAACACCCAGAGTGAGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR CAA 90 bp | GTATTGGGTGATCCAAGAGAGCAGGCTGAGAAAACCATGAGGAGGAAGTTGGCCCACTGGTACACTAGGTaGGCTGGTGTGACTGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: VLGDPREQAEKTMRRKLAHWYTR*AGVTGS Trigger: AGAGCCAGTCACACCAGCCAACCTAGTGTACCAGTG...GGCCAACTTCCTCCTCATGGTTTTCTCAGCCTGCTCTCTTGGATCACCCAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| 3UTR-3UTR CAA 90 bp | TTAGTGATTGATGTTGGAGGACTCAGCTCACTCTGGGTGTTGCTATCCCTGGGCCTCCAGGTTCCTGCCTaGAATTCCTGCCCTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: LVIDVGGLSSLWVLLSLGLQVPA*NSCPDF Trigger: GAAGTCAGGGCAGGAATTCAAGGCAGGAACCTGGAG...GCCCAGGGATAGCAACACCCAGAGTGAGCTGAGTCCTCCAACATCAATCACTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR TCA 72 bp | CTGGGAGGTTGGCCAATACAGACCTCACCCATGAACTaGCTCTTGGTCTGTCTGCTTGTCCAGCAACCATTG | + |
|
Preference number: 3 (lower is better) Translates to: LGGWPIQTSPMN*LLVCLLVQQPL Trigger: CAATGGTTGCTGGACAAGCAGACAGACCAAGAGTCAGTTCATGGGTGAGGTCTGTATTGGCCAACCTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR TCA 72 bp | TATTGGGTGATCCAAGAGAGCAGGCTGAGAAAACCATaGGGAGGAAGTTGGCCAGCAGTGCCCCTCCATGAT | + |
|
Preference number: 3 (lower is better) Translates to: YWVIQESRLRKP*GGSWPAVPLHD Trigger: ATCATGGAGGGGCACTGCTGGCCAACTTCCTCCTCATGGTTTTCTCAGCCTGCTCTCTTGGATCACCCAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAGGTGGTATTGGGTGATCCAAGAGAGCAGGCTGAGAAAACCATGAGGAGGATAGCCTTTGTGGGTTaGCATTTACTCAGAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GQVVLGDPREQAEKTMRRIAFVG*HLLRAA Trigger: TGCTGCTCTGAGTAAATGCAAACCCACAAAGGCTAT...CCTCCTCATGGTTTTCTCAGCCTGCTCTCTTGGATCACCCAATACCACCTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR-3UTR CAA 90 bp | GATCGCTGCTTCAGTTCCTGCCTCCAGGTTCCTGCCTTGAATTCCTGCCCTGACTCTCCCCAGTTGCTTTaGCTTGTGATGTTTTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: DRCFSSCLQVPALNSCPDSPQLL*LVMFSH Trigger: ATGAGAAAACATCACAAGCAAAAGCAACTGGGGAGA...GTCAGGGCAGGAATTCAAGGCAGGAACCTGGAGGCAGGAACTGAAGCAGCGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTGCATCTGCAGCCTCCTaGCCCAGTCTGCATCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFASAAS*PSLHPE Trigger: CTCTGGATGCAGACTGGGCAAGGAGGCTGCAGATGC...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR GCA 72 bp | GCAACCATTGCTGTTGAACTCCCCTACAGTCTGCAGTaGGTAGCCTCAGCATCTGAAGATACTGTGCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: ATIAVELPYSLQ*VASASEDTVLN Trigger: ATTCAGCACAGTATCTTCAGATGCTGAGGCTACGCACTGCAGACTGTAGGGGAGTTCAACAGCAATGGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCAGCAGTCACTTGGATGCTACATATGTTGATGTTAATAATTTACTCCCAGGCATCTGCAGCCTCCTaGCCCAGTCTGCATCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PSAVTWMLHMLMLIIYSQASAAS*PSLHPE Trigger: CTCTGGATGCAGACTGGGCAAGGAGGCTGCAGATGC...CTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAAGTGACTGCTGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR TCA 72 bp | TACCAAGAAGAGAATCACAGGGGATGGTCTGGGGTCTaGATGCTGGGATTTCTAAGTTCTCCACATGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: YQEENHRGWSGV*MLGFLSSPHGS Trigger: GCTTCCATGTGGAGAACTTAGAAATCCCAGCATTCAGACCCCAGACCATCCCCTGTGATTCTCTTCTTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR TCA 72 bp | GGGAAGGTCAGGGAATGGACGTTGATCTTTATTGATTaGCCCTTCCAAGTCCACCTACAGTTCTGGGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GKVREWTLIFID*PFQVHLQFWEV Trigger: AACCTCCCAGAACTGTAGGTGGACTTGGAAGGGTCAATCAATAAAGATCAACGTCCATTCCCTGACCTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR CCA 72 bp | CATGGAAGCCCTCTACCCAGTGTGGAAAGAGGAGGCTaGACTTTGAGAGATGACAAAGTCATAAAGGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HGSPLPSVERGG*TLRDDKVIKAK Trigger: CTTTGCCTTTATGACTTTGTCATCTCTCAAAGTCCAGCCTCCTCTTTCCACACTGGGTAGAGGGCTTCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTGGGATTTCTAAGTTCTCCACATGGAAGCCCTCTACCCAGTGTGGAAAGAATAGCCTTTGTGGGTTaGCATTTACTCAGAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: MLGFLSSPHGSPLPSVERIAFVG*HLLRAA Trigger: TGCTGCTCTGAGTAAATGCAAACCCACAAAGGCTAT...TCTTTCCACACTGGGTAGAGGGCTTCCATGTGGAGAACTTAGAAATCCCAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCATCAGGCTGGATTTCTATTTCAAAAGTCTCCTCCATGTTGATCTGTTAAAAAGCTCACTCTGGGTGTaGCTATCCCTGGGCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CIRLDFYFKSLLHVDLLKSSLWV*LSLGRW Trigger: CCACCTGCCCAGGGATAGCAACACCCAGAGTGAGCT...TTTTAACAGATCAACATGGAGGAGACTTTTGAAATAGAAATCCAGCCTGATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTGGGATTTCTAAGTTCTCCACATGGAAGCCCTCTACCCAGTGTGGAAAGAATACACCGTCTTTCTTaGTCTTTCGTCATTTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: MLGFLSSPHGSPLPSVERIHRLS*SFVIFP Trigger: GGGAAAAATGACGAAAGACAAAGAAAGACGGTGTAT...TCTTTCCACACTGGGTAGAGGGCTTCCATGTGGAGAACTTAGAAATCCCAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCTCTCCCCAGTTGCTTTaGCTTGTGATGTTTTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: CHVVGTGTRFIHRLSLSFSPQLL*LVMFSH Trigger: ATGAGAAAACATCACAAGCAAAAGCAACTGGGGAGA...GAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR TCA 72 bp | CAGGCTGGATTTCTATTTCAAAAGTCTCCTCCATGTTaGTCTGTTAAAAAGTCCATCCAGGTTCAGATAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QAGFLFQKSPPC*SVKKSIQVQIG Trigger: GCCTATCTGAACCTGGATGGACTTTTTAACAGATCAACATGGAGGAGACTTTTGAAATAGAAATCCAGCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCATCAGGCTGGATTTCTATTTCAAAAGTCTCCTCCATGTTGATCTGTTAAAAGATGATGCTAATAATTaGCCATGTGGTAGGCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: CIRLDFYFKSLLHVDLLKDDANN*PCGRHW Trigger: CCAGTGCCTACCACATGGCAAATTATTAGCATCATC...TTTTAACAGATCAACATGGAGGAGACTTTTGAAATAGAAATCCAGCCTGATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCATCAGGCTGGATTTCTATTTCAAAAGTCTCCTCCATGTTGATCTGTTAAAAAGAGGAGGCTGGACTTaGAGAGATGACAAAGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: CIRLDFYFKSLLHVDLLKRGGWT*RDDKVI Trigger: TATGACTTTGTCATCTCTCAAAGTCCAGCCTCCTCT...TTTTAACAGATCAACATGGAGGAGACTTTTGAAATAGAAATCCAGCCTGATGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR TCA 72 bp | ACCTGGGCTGTTGATTTATCTAGTTGTATGTCAATGTaGCACATTTTGGAAGGGGGAACTTCAATTAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TWAVDLSSCMSM*HILEGGTSIKE Trigger: TTCCTTAATTGAAGTTCCCCCTTCCAAAATGTGTCACATTGACATACAACTAGATAAATCAACAGCCCAGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR CCA 72 bp | AATGATGATGCTAATAATTTGCCATGTGGTAGGCACTaGAACACGTTTCATACACCGTCTTTCTTTGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: NDDANNLPCGRH*NTFHTPSFFVF Trigger: AAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCAAATTATTAGCATCATCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCATCAGGCTGGATTTCTATTTCAAAAGTCTCCTCCATGTTGATCTGTTAAAAATACACCGTCTTTCTTaGTCTTTCGTCATTTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: CIRLDFYFKSLLHVDLLKIHRLS*SFVIFP Trigger: GGGAAAAATGACGAAAGACAAAGAAAGACGGTGTAT...TTTTAACAGATCAACATGGAGGAGACTTTTGAAATAGAAATCCAGCCTGATGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | GATCGCTGCTTCAGTTCCTGCCTCCAGGTTCCTGCCTTGAATTCCTGCCCTGACCCTGGGAACCTCCTCTaGACTCTGACCAGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: DRCFSSCLQVPALNSCPDPGNLL*TLTRNS Trigger: GGAGTTCCTGGTCAGAGTGCAGAGGAGGTTCCCAGG...GTCAGGGCAGGAATTCAAGGCAGGAACCTGGAGGCAGGAACTGAAGCAGCGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | AGGACTAGTGCCCTTACAAAAGAGGCCCTAGAGGCCCCTCTGCCATGTGATAACCAGCAGGCCTGGGTCTaGAGGTTCCTCCCTAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTSALTKEALEAPLPCDNQQAWV*RFLPRH Trigger: ATGCCTAGGGAGGAACCTGCAGACCCAGGCCTGCTG...GTTATCACATGGCAGAGGGGCCTCTAGGGCCTCTTTTGTAAGGGCACTAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | AGGACTAGTGCCCTTACAAAAGAGGCCCTAGAGGCCCCTCTGCCATGTGATAACCCGTTACACACCAGGTaGCGTTTCAGGCAGCGACCT | + |
|
Preference number: 4 (lower is better) Translates to: RTSALTKEALEAPLPCDNPLHTR*RFRQRP Trigger: AGGTCGCTGCCTGAAACGCCACCTGGTGTGTAACGG...GTTATCACATGGCAGAGGGGCCTCTAGGGCCTCTTTTGTAAGGGCACTAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | GTATTGGGTGATCCAAGAGAGCAGGCTGAGAAAACCATGAGGAGGAAGTTGGCCGACACCGGCAGTTGGTaGCGTCAAGTATGGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLGDPREQAEKTMRRKLADTGSW*RQVWVP Trigger: GGGAACCCATACTTGACGGCACCAACTGCCGGTGTC...GGCCAACTTCCTCCTCATGGTTTTCTCAGCCTGCTCTCTTGGATCACCCAATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCCAGACCCTAGACCTTCTGGAACCTTCATCTCTCAGTATATGCTTCCACAGCAGGCCTGGGTCTaGAGGTTCCTCCCTAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASPDPRPSGTFISQYMLPQQAWV*RFLPRH Trigger: ATGCCTAGGGAGGAACCTGCAGACCCAGGCCTGCTG...TGGAAGCATATACTGAGAGATGAAGGTTCCAGAAGGTCTAGGGTCTGGAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | GATCGCTGCTTCAGTTCCTGCCTCCAGGTTCCTGCCTTGAATTCCTGCCCTGACGGAATGAAGATGCTTTaGACCCGGATCCAGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: DRCFSSCLQVPALNSCPDGMKML*TRIQSP Trigger: AGGTGACTGGATCCGGGTCCAAAGCATCTTCATTCC...GTCAGGGCAGGAATTCAAGGCAGGAACCTGGAGGCAGGAACTGAAGCAGCGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR CAA 72 bp | CTCACTCTGGGTGTTGCTATCCCTGGGCAGGTGGTATaGGGTGATCCAAGAGAGCAGGCTGAGAAAACCATG | + |
|
Preference number: 4 (lower is better) Translates to: LTLGVAIPGQVV*GDPREQAEKTM Trigger: CATGGTTTTCTCAGCCTGCTCTCTTGGATCACCCAATACCACCTGCCCAGGGATAGCAACACCCAGAGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR TCA 90 bp | TGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGGGTCACAGCTCGGGTaGCCCGCTGGTTCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CHVVGTGTRFIHRLSLSFGSQLG*PAGSPS Trigger: AGAAGGTGAACCAGCGGGTCACCCGAGCTGTGACCC...GAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
||
| CDS-3UTR TCA 90 bp | TTGGCTGGTGTGACTGGCTCTTTTCGGGAAGGTCAGGGAATGGACGTTGATCTTTACCAGTCACTCAACTaGCAGGACACTGCTTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAGVTGSFREGQGMDVDLYQSLN*QDTACG Trigger: CCCGCAAGCAGTGTCCTGTCAGTTGAGTGACTGGTA...AAGATCAACGTCCATTCCCTGACCTTCCCGAAAAGAGCCAGTCACACCAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064873.9 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCCAGACCCTAGACCTTCTGGAACCTTCATCTCTCAGTATATGCTTCCAACCTCCTCTGCACTCTaGCCAGGAACTCCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASPDPRPSGTFISQYMLPTSSAL*PGTPAA Trigger: AGCTGCTGGAGTTCCTGGTCAGAGTGCAGAGGAGGT...TGGAAGCATATACTGAGAGATGAAGGTTCCAGAAGGTCTAGGGTCTGGAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR TCA 90 bp | ATGCTGGGATTTCTAAGTTCTCCACATGGAAGCCCTCTACCCAGTGTGGAAAGAACCTCCTCTGCACTCTaGCCAGGAACTCCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MLGFLSSPHGSPLPSVERTSSAL*PGTPAA Trigger: AGCTGCTGGAGTTCCTGGTCAGAGTGCAGAGGAGGT...TCTTTCCACACTGGGTAGAGGGCTTCCATGTGGAGAACTTAGAAATCCCAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | TTACTCAGAGCAGCAAGCAGTCCTAACCAGCAACCCAGACAGGTAACAGCATCTCCAAACTTGCTTGGCTaGAAGAGGCTCCGGTATCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRAASSPNQQPRQVTASPNLLG*KRLRYR Trigger: CCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGG...AGATGCTGTTACCTGTCTGGGTTGCTGGTTAGGACTGCTTGCTGCTCTGAGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | TGCAGACTGCATTTTCTGACTTGTCCTCCCTCAGCAGTCACTTGGATGCTACATGACACCGGCAGTTGGTaGCGTCAAGTATGGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CRLHFLTCPPSAVTWMLHDTGSW*RQVWVP Trigger: GGGAACCCATACTTGACGGCACCAACTGCCGGTGTC...ATGTAGCATCCAAGTGACTGCTGAGGGAGGACAAGTCAGAAAATGCAGTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | TGCAGACTGCATTTTCTGACTTGTCCTCCCTCAGCAGTCACTTGGATGCTACATGCCTTAGACAAGGTGTaGGGCTGTCACAGCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CRLHFLTCPPSAVTWMLHALDKV*GCHSWP Trigger: AGGCCAGCTGTGACAGCCCCACACCTTGTCTAAGGC...ATGTAGCATCCAAGTGACTGCTGAGGGAGGACAAGTCAGAAAATGCAGTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR TCA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTGGGTCACAGCTCGGGTaGCCCGCTGGTTCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFGSQLG*PAGSPS Trigger: AGAAGGTGAACCAGCGGGTCACCCGAGCTGTGACCC...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
||
| CDS-3UTR GCA 90 bp | GATAGAAAGGTGGTTCTGGGAAGTAAAGGGCAACAACTCCCTGGAACAAAGAGGTGGGTGGTGGGTTGTTaGACTGTCTCCTCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRKVVLGSKGQQLPGTKRWVVGC*TVSSSP Trigger: AGGAGAGGAGGAGACAGTGCAACAACCCACCACCCA...CCTCTTTGTTCCAGGGAGTTGTTGCCCTTTACTTCCCAGAACCACCTTTCTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | AGCTCACTCTGGGTGTTGCTATCCCTGGGCAGGTGGTATTGGGTGATCCAAGAGTATCACCACTGCAGATaGTTCCTCCAAACTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLWVLLSLGRWYWVIQEYHHCR*FLQTCL Trigger: CAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATA...CTCTTGGATCACCCAATACCACCTGCCCAGGGATAGCAACACCCAGAGTGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | CCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTGCCTTAGACAAGGTGTaGGGCTGTCACAGCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PCGRHWNTFHTPSFFVFRALDKV*GCHSWP Trigger: AGGCCAGCTGTGACAGCCCCACACCTTGTCTAAGGC...ACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | GATCGCTGCTTCAGTTCCTGCCTCCAGGTTCCTGCCTTGAATTCCTGCCCTGACCCGCCAATGCATTTTTaGACTTCATCCACAGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DRCFSSCLQVPALNSCPDPPMHF*TSSTVV Trigger: TACTACTGTGGATGAAGTCCAAAAATGCATTGGCGG...GTCAGGGCAGGAATTCAAGGCAGGAACCTGGAGGCAGGAACTGAAGCAGCGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR TCA 90 bp | TGCAGACTGCATTTTCTGACTTGTCCTCCCTCAGCAGTCACTTGGATGCTACATCGTACATGCCATAGTTaGACTGCTCTGGGAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CRLHFLTCPPSAVTWMLHRTCHS*TALGAP Trigger: TGGAGCTCCCAGAGCAGTTCAACTATGGCATGTACG...ATGTAGCATCCAAGTGACTGCTGAGGGAGGACAAGTCAGAAAATGCAGTCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR TCA 90 bp | ATGCTGGGATTTCTAAGTTCTCCACATGGAAGCCCTCTACCCAGTGTGGAAAGACGTACATGCCATAGTTaGACTGCTCTGGGAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MLGFLSSPHGSPLPSVERRTCHS*TALGAP Trigger: TGGAGCTCCCAGAGCAGTTCAACTATGGCATGTACG...TCTTTCCACACTGGGTAGAGGGCTTCCATGTGGAGAACTTAGAAATCCCAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | TGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCCCAAACTTGCTTGGCTaGAAGAGGCTCCGGTATCGG | + |
|
Preference number: 4 (lower is better) Translates to: CHVVGTGTRFIHRLSLSFPNLLG*KRLRYR Trigger: CCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGG...GAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | GATAGAAAGGTGGTTCTGGGAAGTAAAGGGCAACAACTCCCTGGAACAAAGAGGTGTCCACACTGTGCTTaGCTTAGACAAGGTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DRKVVLGSKGQQLPGTKRCPHCA*LRQGVG Trigger: CCCCACACCTTGTCTAAGGCAAGCACAGTGTGGACA...CCTCTTTGTTCCAGGGAGTTGTTGCCCTTTACTTCCCAGAACCACCTTTCTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | GGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTTCCCGACACCGGCAGTTGGTaGCGTCAAGTATGGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGTRFIHRLSLSFVIFPDTGSW*RQVWVP Trigger: GGGAACCCATACTTGACGGCACCAACTGCCGGTGTC...GGGAAAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | TGCAGACTGCATTTTCTGACTTGTCCTCCCTCAGCAGTCACTTGGATGCTACATAATTCCATCAGGTACTaGTCCAAAGCCCGTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CRLHFLTCPPSAVTWMLHNSIRY*SKARRR Trigger: CCTGCGACGGGCTTTGGACCAGTACCTGATGGAATT...ATGTAGCATCCAAGTGACTGCTGAGGGAGGACAAGTCAGAAAATGCAGTCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR CAA 72 bp | ATTGACCCTTCCAAGTCCACCTACAGTTCTGGGAGGTaGGCCAATACAGACCTCACCCATGAACTGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IDPSKSTYSSGR*ANTDLTHELTL Trigger: AAGAGTCAGTTCATGGGTGAGGTCTGTATTGGCCAACCTCCCAGAACTGTAGGTGGACTTGGAAGGGTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR TCA 90 bp | CCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCCATGGTTCCAGAGGTaGTGTAGTGGGTGCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: PCGRHWNTFHTPSFFVFRPWFQR*CSGCHS Trigger: ACTATGGCACCCACTACATCACCTCTGGAACCATGG...ACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR TCA 90 bp | ATAAAATGGAACACAGCCTCTCCAGACCCTAGACCTTCTGGAACCTTCATCTCTCCATGGTTCCAGAGGTaGTGTAGTGGGTGCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: IKWNTASPDPRPSGTFISPWFQR*CSGCHS Trigger: ACTATGGCACCCACTACATCACCTCTGGAACCATGG...AGAGATGAAGGTTCCAGAAGGTCTAGGGTCTGGAGAGGCTGTGTTCCATTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR TCA 90 bp | AGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTTCCACCTCCTCTGCACTCTaGCCAGGAACTCCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RHWNTFHTPSFFVFRHFSTSSAL*PGTPAA Trigger: AGCTGCTGGAGTTCCTGGTCAGAGTGCAGAGGAGGT...GGAAAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | TTGGCTGGTGTGACTGGCTCTTTTCGGGAAGGTCAGGGAATGGACGTTGATCTTAGCTCCATTAATGACTaGAGCATTCCTTCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGVTGSFREGQGMDVDLSSIND*SIPSSS Trigger: GCTGGATGAAGGAATGCTGCAGTCATTAATGGAGCT...AAGATCAACGTCCATTCCCTGACCTTCCCGAAAAGAGCCAGTCACACCAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCCAGACCCTAGACCTTCTGGAACCTTCATCTCTCAGTATATGCTTCCAACAGAACTTCCACCTTaGACCCGAGAAATGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASPDPRPSGTFISQYMLPTELPP*TREMMS Trigger: GGACATCATTTCTCGGGTGCAAGGTGGAAGTTCTGT...TGGAAGCATATACTGAGAGATGAAGGTTCCAGAAGGTCTAGGGTCTGGAGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTCCTGGGAACCTCCTCTaGACTCTGACCAGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFPGNLL*TLTRNS Trigger: GGAGTTCCTGGTCAGAGTGCAGAGGAGGTTCCCAGG...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | GTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTGGGTGGTGGGTTGTTaGACTGTCTCCTCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VVGTGTRFIHRLSLSFVIWVVGC*TVSSSP Trigger: AGGAGAGGAGGAGACAGTGCAACAACCCACCACCCA...AATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | CCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTTCCTCCAAACTTGCTTaGCTGCAAGAGGCTCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PCGRHWNTFHTPSFFVFRSSKLA*LQEAPV Trigger: TACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGA...ACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | GTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTGGGGCTGTCACAGCTaGCCTCATCCCAGATATCAC | + |
|
Preference number: 4 (lower is better) Translates to: VVGTGTRFIHRLSLSFVIWGCHS*PHPRYH Trigger: GTGATATCTGGGATGAGGCCAGCTGTGACAGCCCCA...AATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTGCCTTAGACAAGGTGTaGGGCTGTCACAGCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFALDKV*GCHSWP Trigger: AGGCCAGCTGTGACAGCCCCACACCTTGTCTAAGGC...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | AGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTTCCCCGTTACACACCAGGTaGCGTTTCAGGCAGCGACCT | + |
|
Preference number: 4 (lower is better) Translates to: RHWNTFHTPSFFVFRHFSPLHTR*RFRQRP Trigger: AGGTCGCTGCCTGAAACGCCACCTGGTGTGTAACGG...GGAAAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | TTTGTCTTTCGTCATTTTTCCCAGTCCCCACGTTCTTTCTCACTGTCAGGTTTTCCGTTACACACCAGGTaGCGTTTCAGGCAGCGACCT | + |
|
Preference number: 4 (lower is better) Translates to: FVFRHFSQSPRSFSLSGFPLHTR*RFRQRP Trigger: AGGTCGCTGCCTGAAACGCCACCTGGTGTGTAACGG...AAAACCTGACAGTGAGAAAGAACGTGGGGACTGGGAAAAATGACGAAAGACAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | CCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTAATTCCATCAGGTACTaGTCCAAAGCCCGTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCGRHWNTFHTPSFFVFRNSIRY*SKARRR Trigger: CCTGCGACGGGCTTTGGACCAGTACCTGATGGAATT...ACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | ATGCTGGGATTTCTAAGTTCTCCACATGGAAGCCCTCTACCCAGTGTGGAAAGAACCTCCATTCTTGGGTaGTGGGTTGTTGCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MLGFLSSPHGSPLPSVERTSILG*WVVALS Trigger: AGACAGTGCAACAACCCACCACCCAAGAATGGAGGT...TCTTTCCACACTGGGTAGAGGGCTTCCATGTGGAGAACTTAGAAATCCCAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR TCA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTTACCAGTCACTCAACTaGCAGGACACTGCTTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFYQSLN*QDTACG Trigger: CCCGCAAGCAGTGTCCTGTCAGTTGAGTGACTGGTA...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
||
| CDS-3UTR TCA 90 bp | CCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCAAGGCTGCCCTTTCTaGTCCTGGGATTGGTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: PCGRHWNTFHTPSFFVFRQGCPF*SWDWFI Trigger: TATGAACCAATCCCAGGATCAGAAAGGGCAGCCTTG...ACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR TCA 90 bp | GGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTTCCCCGTACATGCCATAGTTaGACTGCTCTGGGAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTGTRFIHRLSLSFVIFPRTCHS*TALGAP Trigger: TGGAGCTCCCAGAGCAGTTCAACTATGGCATGTACG...GGGAAAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTCCAAACTTGCTTGGCTaGAAGAGGCTCCGGTATCGG | + |
|
Preference number: 4 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFPNLLG*KRLRYR Trigger: CCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGG...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | AGGACTAGTGCCCTTACAAAAGAGGCCCTAGAGGCCCCTCTGCCATGTGATAACCAGCTGAGTGGGACTTaGCATTCTTTATGTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RTSALTKEALEAPLPCDNQLSGT*HSLCEK Trigger: TTTTTCACATAAAGAATGGCAAGTCCCACTCAGCTG...GTTATCACATGGCAGAGGGGCCTCTAGGGCCTCTTTTGTAAGGGCACTAGTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | ATAATTTGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTGGGTGGTGGGTTGTTaGACTGTCTCCTCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IICHVVGTGTRFIHRLSLWVVGC*TVSSSP Trigger: AGGAGAGGAGGAGACAGTGCAACAACCCACCACCCA...CAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCAAATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTTGGGGCTGTCACAGCTaGCCTCATCCCAGATATCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFWGCHS*PHPRYH Trigger: GTGATATCTGGGATGAGGCCAGCTGTGACAGCCCCA...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | TGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCACCTCCATTCTTGGGTaGTGGGTTGTTGCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CHVVGTGTRFIHRLSLSFTSILG*WVVALS Trigger: AGACAGTGCAACAACCCACCACCCAAGAATGGAGGT...GAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR TCA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTCCATGGTTCCAGAGGTaGTGTAGTGGGTGCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFPWFQR*CSGCHS Trigger: ACTATGGCACCCACTACATCACCTCTGGAACCATGG...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTTGTCCACACTGTGCTTaGCTTAGACAAGGTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFCPHCA*LRQGVG Trigger: CCCCACACCTTGTCTAAGGCAAGCACAGTGTGGACA...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | ATAAAATGGAACACAGCCTCTCCAGACCCTAGACCTTCTGGAACCTTCATCTCTACAGAACTTCCACCTTaGACCCGAGAAATGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IKWNTASPDPRPSGTFISTELPP*TREMMS Trigger: GGACATCATTTCTCGGGTGCAAGGTGGAAGTTCTGT...AGAGATGAAGGTTCCAGAAGGTCTAGGGTCTGGAGAGGCTGTGTTCCATTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTTCCTCCAAACTTGCTTaGCTGCAAGAGGCTCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFSSKLA*LQEAPV Trigger: TACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGA...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | ATAATTTGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCCTCCAAACTTGCTTaGCTGCAAGAGGCTCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IICHVVGTGTRFIHRLSLSSKLA*LQEAPV Trigger: TACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGA...CAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCAAATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | TTGGATGCTACATATGTTGATGTTAATAATTTACTCCCAGTGGCCCAAGAGCCTTGGGGCTGTCACAGCTaGCCTCATCCCAGATATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LDATYVDVNNLLPVAQEPWGCHS*PHPRYH Trigger: GTGATATCTGGGATGAGGCCAGCTGTGACAGCCCCA...AGGCTCTTGGGCCACTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTAATTCCATCAGGTACTaGTCCAAAGCCCGTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFNSIRY*SKARRR Trigger: CCTGCGACGGGCTTTGGACCAGTACCTGATGGAATT...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | TGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCATCTCCATTCTTGGGTaGTGGGTTGTTGCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CHVVGTGTRFIHRLSLSFISILG*WVVALS Trigger: AGACAGTGCAACAACCCACCACCCAAGAATGGAGAT...GAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048947.15 |
||
| 3UTR CAA 72 bp | AGCCCTCTACCCAGTGTGGAAAGAGGAGGCTGGACTTaGAGAGATGACAAAGTCATAAAGGCAAAGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLPSVERGGWT*RDDKVIKAKFS Trigger: TGAGAACTTTGCCTTTATGACTTTGTCATCTCTCAAAGTCCAGCCTCCTCTTTCCACACTGGGTAGAGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR TCA 90 bp | GGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTTCCCAAGTCTCCTCCATGTTaGTCTCCATTCTTGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGTRFIHRLSLSFVIFPKSPPC*SPFLGG Trigger: ACCACCCAAGAATGGAGATCAACATGGAGGAGACTT...GGGAAAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048947.15 |
||
| CDS-3UTR GCA 90 bp | CCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTAGCTCCATTAATGACTaGAGCATTCCTTCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PCGRHWNTFHTPSFFVFRSSIND*SIPSSS Trigger: GCTGGATGAAGGAATGCTGCAGTCATTAATGGAGCT...ACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | TGCATCAGGCTGGATTTCTATTTCAAAAGTCTCCTCCATGTTGATCTGTTAAAACCTGGGAACCTCCTCTaGACTCTGACCAGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CIRLDFYFKSLLHVDLLKPGNLL*TLTRNS Trigger: GGAGTTCCTGGTCAGAGTGCAGAGGAGGTTCCCAGG...TTTTAACAGATCAACATGGAGGAGACTTTTGAAATAGAAATCCAGCCTGATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTGGAATGAAGATGCTTTaGACCCGGATCCAGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFGMKML*TRIQSP Trigger: AGGTGACTGGATCCGGGTCCAAAGCATCTTCATTCC...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | ATAATTTGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGGGAATGAAGATGCTTTaGACCCGGATCCAGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: IICHVVGTGTRFIHRLSLGMKML*TRIQSP Trigger: AGGTGACTGGATCCGGGTCCAAAGCATCTTCATTCC...CAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCAAATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | AGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTTCCACAGAACTTCCACCTTaGACCCGAGAAATGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHWNTFHTPSFFVFRHFSTELPP*TREMMS Trigger: GGACATCATTTCTCGGGTGCAAGGTGGAAGTTCTGT...GGAAAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | TGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCCCGCCAATGCATTTTTaGACTTCATCCACAGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CHVVGTGTRFIHRLSLSFPPMHF*TSSTVV Trigger: TACTACTGTGGATGAAGTCCAAAAATGCATTGGCGG...GAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR CAA 72 bp | TTTCCCAGTCCCCACGTTCTTTCTCACTGTCAGGTTTaGCATCAGGCTGGATTTCTATTTCAAAAGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FPSPHVLSHCQV*HQAGFLFQKSP Trigger: AGGAGACTTTTGAAATAGAAATCCAGCCTGATGCAAAACCTGACAGTGAGAAAGAACGTGGGGACTGGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | TGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCCAGCTGAGTGGGACTTaGCATTCTTTATGTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CHVVGTGTRFIHRLSLSFQLSGT*HSLCEK Trigger: TTTTTCACATAAAGAATGGCAAGTCCCACTCAGCTG...GAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS-3UTR GCA 90 bp | ATAAAATGGAACACAGCCTCTCCAGACCCTAGACCTTCTGGAACCTTCATCTCTCAGCTGAGTGGGACTTaGCATTCTTTATGTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IKWNTASPDPRPSGTFISQLSGT*HSLCEK Trigger: TTTTTCACATAAAGAATGGCAAGTCCCACTCAGCTG...AGAGATGAAGGTTCCAGAAGGTCTAGGGTCTGGAGAGGCTGTGTTCCATTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR GCA 90 bp | ATAATTTGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGAGCTCCATTAATGACTaGAGCATTCCTTCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IICHVVGTGTRFIHRLSLSSIND*SIPSSS Trigger: GCTGGATGAAGGAATGCTGCAGTCATTAATGGAGCT...CAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCAAATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTTATCACCACTGCAGATaGTTCCTCCAAACTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFYHHCR*FLQTCL Trigger: CAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATA...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR TCA 90 bp | TGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCTTCACAAAACTCTCCTaGTATACCTACTCCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CHVVGTGTRFIHRLSLSFFTKLS*YTYSFN Trigger: ATTGAAGGAGTAGGTATATCAGGAGAGTTTTGTGAA...GAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CCA 90 bp | ATAATTTGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGCCGCCAATGCATTTTTaGACTTCATCCACAGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IICHVVGTGTRFIHRLSLPPMHF*TSSTVV Trigger: TACTACTGTGGATGAAGTCCAAAAATGCATTGGCGG...CAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCAAATTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| 3UTR CAA 72 bp | ACTGCATTTTCTGACTTGTCCTCCCTCAGCAGTCACTaGGATGCTACATATGTTGATGTTAATAATTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: TAFSDLSSLSSH*DATYVDVNNLL Trigger: GAGTAAATTATTAACATCAACATATGTAGCATCCAAGTGACTGCTGAGGGAGGACAAGTCAGAAAATGCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR TCA 90 bp | TGCATCAGGCTGGATTTCTATTTCAAAAGTCTCCTCCATGTTGATCTGTTAAAATTCACAAAACTCTCCTaGTATACCTACTCCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CIRLDFYFKSLLHVDLLKFTKLS*YTYSFN Trigger: ATTGAAGGAGTAGGTATATCAGGAGAGTTTTGTGAA...TTTTAACAGATCAACATGGAGGAGACTTTTGAAATAGAAATCCAGCCTGATGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGATTTCTATTTCAAAAGTCTCCTCCATGTTGATCTGTTAAAAAGTCCATTCACAAAACTCTCCTaGTATACCTACTCCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RLDFYFKSLLHVDLLKSPFTKLS*YTYSFN Trigger: ATTGAAGGAGTAGGTATATCAGGAGAGTTTTGTGAA...TGGACTTTTTAACAGATCAACATGGAGGAGACTTTTGAAATAGAAATCCAGCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS GCA 90 bp | GTGGTGGGTTGTTGCACTGTCTCCTCCTCTCCTGGGAACCTCCTCTaGACTCTGACCAGGAACTCCAGCAGCTCCAGTGGCCAGCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VVGCCTVSSSPGNLL*TLTRNSSSSSGQRL Trigger: AAGCCGCTGGCCACTGGAGCTGCTGGAGTTCCTGGTCAGAGTGCAGAGGAGGTTCCCAGGAGAGGAGGAGACAGTGCAACAACCCACCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS TCA 90 bp | AGTCACTCAACTGACAGGACACTGCTTGCGGGGTCACAGCTCGGGTaGCCCGCTGGTTCACCTTCTCTTGTGCAGTTACCCCAGGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SHSTDRTLLAGSQLG*PAGSPSLVQLPQGA Trigger: GGCACCCTGGGGTAACTGCACAAGAGAAGGTGAACCAGCGGGTCACCCGAGCTGTGACCCCGCAAGCAGTGTCCTGTCAGTTGAGTGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
||
| CDS TCA 90 bp | ATCACCGTGCGTTCACAGGCCAGGCCCTGCCGGCCCATACTACACTaGCACCGGCAGTTGGTGCCGTCAAGTATGGGTTCCCCATTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ITVRSQARPCRPILH*HRQLVPSSMGSPLL Trigger: CAACAATGGGGAACCCATACTTGACGGCACCAACTGCCGGTGTCAGTGTAGTATGGGCCGGCAGGGCCTGGCCTGTGAACGCACGGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS GCA 90 bp | TTGCGGGGTCACAGCTCGGGTGACCCGCTGGTTCACCTTCTCTTGTaGAGTTACCCCAGGGTGCCATGCCACCAAAGACAAGCCAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LRGHSSGDPLVHLLL*SYPRVPCHQRQAKE Trigger: TTCTTTGGCTTGTCTTTGGTGGCATGGCACCCTGGGGTAACTGCACAAGAGAAGGTGAACCAGCGGGTCACCCGAGCTGTGACCCCGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
||
| CDS GCA 90 bp | AAGGTGTGGGGCTGTCACAGCTGGCCTCATCCCAGATATCACCACTaGAGATGGTTCCTCCAAACTTGCTTGGCTGCAAGAGGCTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: KVWGCHSWPHPRYHH*RWFLQTCLAARGSG Trigger: ACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATCTGGGATGAGGCCAGCTGTGACAGCCCCACACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS GCA 90 bp | CAGCGACCTGTCTCTCTACACTGGAAATCCTGTCCACACTGTGCTTaGCTTAGACAAGGTGTGGGGCTGTCACAGCTGGCCTCATCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QRPVSLHWKSCPHCA*LRQGVGLSQLASSQ Trigger: CTGGGATGAGGCCAGCTGTGACAGCCCCACACCTTGTCTAAGGCAAGCACAGTGTGGACAGGATTTCCAGTGTAGAGAGACAGGTCGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS CCA 90 bp | TGGGGCTGTCACAGCTGGCCTCATCCCAGATATCACCACTGCAGATaGTTCCTCCAAACTTGCTTGGCTGCAAGAGGCTCCGGTATCGGT | + |
|
Preference number: 5 (lower is better) Translates to: WGCHSWPHPRYHHCR*FLQTCLAARGSGIG Trigger: ACCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATCTGGGATGAGGCCAGCTGTGACAGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS-3UTR CAA 90 bp | AGCTCACTCTGGGTGTTGCTATCCCTGGGCAGGTGGTATTGGGTGATCCAAGAGATGGGTTCCCCATTGTaGAAGCAGGGCCCACAACGA | + |
|
Preference number: 5 (lower is better) Translates to: SSLWVLLSLGRWYWVIQEMGSPL*KQGPQR Trigger: TCGTTGTGGGCCCTGCTTCAACAATGGGGAACCCAT...CTCTTGGATCACCCAATACCACCTGCCCAGGGATAGCAACACCCAGAGTGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS-3UTR CAA 90 bp | GGGCAGGTGGTATTGGGTGATCCAAGAGAGCAGGCTGAGAAAACCATGAGGAGGATGGGTTCCCCATTGTaGAAGCAGGGCCCACAACGA | + |
|
Preference number: 5 (lower is better) Translates to: GQVVLGDPREQAEKTMRRMGSPL*KQGPQR Trigger: TCGTTGTGGGCCCTGCTTCAACAATGGGGAACCCAT...CCTCCTCATGGTTTTCTCAGCCTGCTCTCTTGGATCACCCAATACCACCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS TCA 90 bp | GCATTAAATTCCATCAGGTACTGGTCCAAAGCCCGTCGCAGGTTCTaGCGTTTCGTCTCCAGGGGTCCCAAGTTTGTGTGCCGCAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALNSIRYWSKARRRF*RFVSRGPKFVCRSS Trigger: GCTACTGCGGCACACAAACTTGGGACCCCTGGAGACGAAACGTCAGAACCTGCGACGGGCTTTGGACCAGTACCTGATGGAATTTAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS CCA 90 bp | GTCCACACTGTGCTTGCCTTAGACAAGGTGTGGGGCTGTCACAGCTaGCCTCATCCCAGATATCACCACTGCAGATGGTTCCTCCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: VHTVLALDKVWGCHS*PHPRYHHCRWFLQT Trigger: AGTTTGGAGGAACCATCTGCAGTGGTGATATCTGGGATGAGGCCAGCTGTGACAGCCCCACACCTTGTCTAAGGCAAGCACAGTGTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS-3UTR CAA 90 bp | AGGACTAGTGCCCTTACAAAAGAGGCCCTAGAGGCCCCTCTGCCATGTGATAACTTCCTCCAAACTTGCTaGGCTGCAAGAGGCTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RTSALTKEALEAPLPCDNFLQTC*AARGSG Trigger: ACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAA...GTTATCACATGGCAGAGGGGCCTCTAGGGCCTCTTTTGTAAGGGCACTAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS-3UTR CAA 90 bp | TTGGCTGGTGTGACTGGCTCTTTTCGGGAAGGTCAGGGAATGGACGTTGATCTTGGGGTACCTCCATTCTaGGGTGGTGGGTTGTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LAGVTGSFREGQGMDVDLGVPPF*GGGLLH Trigger: GTGCAACAACCCACCACCCAAGAATGGAGGTACCCC...AAGATCAACGTCCATTCCCTGACCTTCCCGAAAAGAGCCAGTCACACCAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS GCA 90 bp | AAAAGTCTCCTCCATGTTGATCTCCATTCTTGGGTGGTGGGTTGTTaGACTGTCTCCTCCTCTCCTGGGAACCTCCTCTGCACTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: KSLLHVDLHSWVVGC*TVSSSPGNLLCTLT Trigger: GGTCAGAGTGCAGAGGAGGTTCCCAGGAGAGGAGGAGACAGTGCAACAACCCACCACCCAAGAATGGAGATCAACATGGAGGAGACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048947.15 |
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| CDS GCA 90 bp | TGGCCTCATCCCAGATATCACCACTGCAGATGGTTCCTCCAAACTTaGTTGGCTGCAAGAGGCTCCGGTATCGGTATGGTTCACCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WPHPRYHHCRWFLQT*LAARGSGIGMVHLL Trigger: GAGAAGGTGAACCATACCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATCTGGGATGAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106808.10 |
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| CDS-3UTR CAA 90 bp | AGCTCACTCTGGGTGTTGCTATCCCTGGGCAGGTGGTATTGGGTGATCCAAGAGGACAGAACTTCCACCTaGCACCCGAGAAATGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSLWVLLSLGRWYWVIQEDRTST*HPRNDV Trigger: GACATCATTTCTCGGGTGCAAGGTGGAAGTTCTGTC...CTCTTGGATCACCCAATACCACCTGCCCAGGGATAGCAACACCCAGAGTGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS-3UTR CAA 90 bp | TTGGCTGGTGTGACTGGCTCTTTTCGGGAAGGTCAGGGAATGGACGTTGATCTTGCGGCTTTGAAGTCTTaGAGCCCCTCTATCACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LAGVTGSFREGQGMDVDLAALKS*SPSITV Trigger: CACGGTGATAGAGGGGCTCAAAGACTTCAAAGCCGC...AAGATCAACGTCCATTCCCTGACCTTCCCGAAAAGAGCCAGTCACACCAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS GCA 90 bp | TCCCAGATATCACCACTGCAGATGGTTCCTCCAAACTTGCTTGGCTaGAAGAGGCTCCGGTATCGGTATGGTTCACCTTCTCTTGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQISPLQMVPPNLLG*KRLRYRYGSPSLVQ Trigger: CTGCACAAGAGAAGGTGAACCATACCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATCTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106808.10 |
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| CDS-3UTR CAA 90 bp | TTAGTGATTGATGTTGGAGGACTCAGCTCACTCTGGGTGTTGCTATCCCTGGGCATGGTTCCTCCAAACTaGCTTGGCTGCAAGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVIDVGGLSSLWVLLSLGMVPPN*LGCKRL Trigger: GAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCAT...GCCCAGGGATAGCAACACCCAGAGTGAGCTGAGTCCTCCAACATCAATCACTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS-3UTR CAA 90 bp | GATCGCTGCTTCAGTTCCTGCCTCCAGGTTCCTGCCTTGAATTCCTGCCCTGACTTTCTCCAGTCTCCATaGTACACAGTTTCACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: DRCFSSCLQVPALNSCPDFLQSP*YTVSHW Trigger: CCAGTGTGAAACTGTGTACAATGGAGACTGGAGAAA...GTCAGGGCAGGAATTCAAGGCAGGAACCTGGAGGCAGGAACTGAAGCAGCGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS-3UTR CAA 90 bp | GATCGCTGCTTCAGTTCCTGCCTCCAGGTTCCTGCCTTGAATTCCTGCCCTGACACCGCCAATGCATTTTaGGACTTCATCCACAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: DRCFSSCLQVPALNSCPDTANAF*DFIHSS Trigger: ACTACTGTGGATGAAGTCCAAAAATGCATTGGCGGT...GTCAGGGCAGGAATTCAAGGCAGGAACCTGGAGGCAGGAACTGAAGCAGCGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS-3UTR CAA 90 bp | GATAGAAAGGTGGTTCTGGGAAGTAAAGGGCAACAACTCCCTGGAACAAAGAGGTTGGGTGGTGGGTTGTaGCACTGTCTCCTCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DRKVVLGSKGQQLPGTKRLGGGL*HCLLLS Trigger: GGAGAGGAGGAGACAGTGCAACAACCCACCACCCAA...CCTCTTTGTTCCAGGGAGTTGTTGCCCTTTACTTCCCAGAACCACCTTTCTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS TCA 90 bp | TTGTACCCCAAGGCTGCCCTTTCTGATCCTGGGATTGGTTCATACTaGTGGCAATCATCCTCAGTGACCCTGACATCTTCACAGTCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LYPKAALSDPGIGSY*WQSSSVTLTSSQSD Trigger: GTCCGACTGTGAAGATGTCAGGGTCACTGAGGATGATTGCCATCAGTATGAACCAATCCCAGGATCAGAAAGGGCAGCCTTGGGGTACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS GCA 90 bp | TGGCCTCATCCCAGATATCACCACTGCAGATGGTTCCTCCAAACTTaGTTGGCTGCAAGAGGCTCCGGTATCGGTACTTTTTATCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: WPHPRYHHCRWFLQT*LAARGSGIGTFYPD Trigger: GTCAGGATAAAAAGTACCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATCTGGGATGAGGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
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| CDS CCA 90 bp | TCCGAAAGTATTTCTCATCCTCCCCATAGTAGAGGCGCTCACAGGTaGGGTCGTACCGCAGCTTTCTCCAGTCTCCATTGTACACAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SESISHPPHSRGAHR*GRTAAFSSLHCTQF Trigger: AAACTGTGTACAATGGAGACTGGAGAAAGCTGCGGTACGACCCCACCTGTGAGCGCCTCTACTATGGGGAGGATGAGAAATACTTTCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS CCA 90 bp | CTCATCCCAGATATCACCACTGCAGATGGTTCCTCCAAACTTGCTTaGCTGCAAGAGGCTCCGGTATCGGTATGGTTCACCTTCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LIPDITTADGSSKLA*LQEAPVSVWFTFSC Trigger: ACAAGAGAAGGTGAACCATACCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATCTGGGATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | ATGCTGGGATTTCTAAGTTCTCCACATGGAAGCCCTCTACCCAGTGTGGAAAGATTCCTCCAAACTTGCTaGGCTGCAAGAGGCTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: MLGFLSSPHGSPLPSVERFLQTC*AARGSG Trigger: ACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAA...TCTTTCCACACTGGGTAGAGGGCTTCCATGTGGAGAACTTAGAAATCCCAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | CCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTGGGGTACCTCCATTCTaGGGTGGTGGGTTGTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PCGRHWNTFHTPSFFVFRGVPPF*GGGLLH Trigger: GTGCAACAACCCACCACCCAAGAATGGAGGTACCCC...ACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS TCA 90 bp | AGCTTCCTCTTGAGTCAGGATGTTGTACCCCAAGGCTGCCCTTTCTaGTCCTGGGATTGGTTCATACTGATGGCAATCATCCTCAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SFLLSQDVVPQGCPF*SWDWFILMAIILSD Trigger: GTCACTGAGGATGATTGCCATCAGTATGAACCAATCCCAGGATCAGAAAGGGCAGCCTTGGGGTACAACATCCTGACTCAAGAGGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS GCA 90 bp | CTGCTGTTGTGTGTCAAGACACTGCCCCAGACAGAACTTCCACCTTaGACCCGAGAAATGATGTCCTCCACTCCTGTGATTTTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLCVKTLPQTELPP*TREMMSSTPVIFFL Trigger: AAGGAAGAAAATCACAGGAGTGGAGGACATCATTTCTCGGGTGCAAGGTGGAAGTTCTGTCTGGGGCAGTGTCTTGACACACAACAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS CCA 90 bp | CTCATCCCAGATATCACCACTGCAGATGGTTCCTCCAAACTTGCTTaGCTGCAAGAGGCTCCGGTATCGGTACTTTTTATCCTGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: LIPDITTADGSSKLA*LQEAPVSVLFILTW Trigger: CCATGTCAGGATAAAAAGTACCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATCTGGGATGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
||
| CDS-3UTR CAA 90 bp | TGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCTTCCTCCAAACTTGCTaGGCTGCAAGAGGCTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: CHVVGTGTRFIHRLSLSFFLQTC*AARGSG Trigger: ACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAA...GAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | GATAGAAAGGTGGTTCTGGGAAGTAAAGGGCAACAACTCCCTGGAACAAAGAGGATGGTTCCTCCAAACTaGCTTGGCTGCAAGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DRKVVLGSKGQQLPGTKRMVPPN*LGCKRL Trigger: GAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCAT...CCTCTTTGTTCCAGGGAGTTGTTGCCCTTTACTTCCCAGAACCACCTTTCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGTGGTATTGGGTGATCCAAGAGAGCAGGCTGAGAAAACCATGAGGAGGTTTCTGATCCTGGGATaGGTTCATACTGATGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GQVVLGDPREQAEKTMRRFLILG*VHTDGN Trigger: ATTGCCATCAGTATGAACCAATCCCAGGATCAGAAA...CCTCCTCATGGTTTTCTCAGCCTGCTCTCTTGGATCACCCAATACCACCTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | GTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTCTGGTTCACCTTCTCTaGTGCAGTTACCCCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VVGTGTRFIHRLSLSFVILVHLL*CSYPRV Trigger: CACCCTGGGGTAACTGCACAAGAGAAGGTGAACCAG...AATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
||
| CDS-3UTR CAA 90 bp | TTAGTGATTGATGTTGGAGGACTCAGCTCACTCTGGGTGTTGCTATCCCTGGGCTTTCTCCAGTCTCCATaGTACACAGTTTCACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVIDVGGLSSLWVLLSLGFLQSP*YTVSHW Trigger: CCAGTGTGAAACTGTGTACAATGGAGACTGGAGAAA...GCCCAGGGATAGCAACACCCAGAGTGAGCTGAGTCCTCCAACATCAATCACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | TTACTCAGAGCAGCAAGCAGTCCTAACCAGCAACCCAGACAGGTAACAGCATCTAAAACTCTGAGGAGATaGAAGTATCCGCCAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLRAASSPNQQPRQVTASKTLRR*KYPPGL Trigger: AAGCCCTGGCGGATACTTCAATCTCCTCAGAGTTTT...AGATGCTGTTACCTGTCTGGGTTGCTGGTTAGGACTGCTTGCTGCTCTGAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | GATAGAAAGGTGGTTCTGGGAAGTAAAGGGCAACAACTCCCTGGAACAAAGAGGGACAGAACTTCCACCTaGCACCCGAGAAATGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: DRKVVLGSKGQQLPGTKRDRTST*HPRNDV Trigger: GACATCATTTCTCGGGTGCAAGGTGGAAGTTCTGTC...CCTCTTTGTTCCAGGGAGTTGTTGCCCTTTACTTCCCAGAACCACCTTTCTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | CCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTGTAATGGCACTGCTGTaGTGTGTCAAGACACTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PCGRHWNTFHTPSFFVFRVMALL*CVKTLP Trigger: GGGCAGTGTCTTGACACACAACAGCAGTGCCATTAC...ACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTTTGGGTGGTGGGTTGTaGCACTGTCTCCTCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFLGGGL*HCLLLS Trigger: GGAGAGGAGGAGACAGTGCAACAACCCACCACCCAA...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | AGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTTCCCTGGTTCACCTTCTCTaGTGCAGTTACCCCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RHWNTFHTPSFFVFRHFSLVHLL*CSYPRV Trigger: CACCCTGGGGTAACTGCACAAGAGAAGGTGAACCAG...GGAAAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGTGGTATTGGGTGATCCAAGAGAGCAGGCTGAGAAAACCATGAGGAGGTCATCCAGCACAATATaGTTCCTTCTCATCTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GQVVLGDPREQAEKTMRRSSSTI*FLLILN Trigger: GTTTAAGATGAGAAGGAACAATATTGTGCTGGATGA...CCTCCTCATGGTTTTCTCAGCCTGCTCTCTTGGATCACCCAATACCACCTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | GTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTGTAATGGCACTGCTGTaGTGTGTCAAGACACTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VVGTGTRFIHRLSLSFVIVMALL*CVKTLP Trigger: GGGCAGTGTCTTGACACACAACAGCAGTGCCATTAC...AATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | TTTGTCTTTCGTCATTTTTCCCAGTCCCCACGTTCTTTCTCACTGTCAGGTTTTATGGGTTCCCCATTGTaGAAGCAGGGCCCACAACGA | + |
|
Preference number: 5 (lower is better) Translates to: FVFRHFSQSPRSFSLSGFMGSPL*KQGPQR Trigger: TCGTTGTGGGCCCTGCTTCAACAATGGGGAACCCAT...AAAACCTGACAGTGAGAAAGAACGTGGGGACTGGGAAAAATGACGAAAGACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | TTTGTCTTTCGTCATTTTTCCCAGTCCCCACGTTCTTTCTCACTGTCAGGTTTTGCGGCTTTGAAGTCTTaGAGCCCCTCTATCACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FVFRHFSQSPRSFSLSGFAALKS*SPSITV Trigger: CACGGTGATAGAGGGGCTCAAAGACTTCAAAGCCGC...AAAACCTGACAGTGAGAAAGAACGTGGGGACTGGGAAAAATGACGAAAGACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTGCGGCTTTGAAGTCTTaGAGCCCCTCTATCACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFAALKS*SPSITV Trigger: CACGGTGATAGAGGGGCTCAAAGACTTCAAAGCCGC...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | TTGGATGCTACATATGTTGATGTTAATAATTTACTCCCAGTGGCCCAAGAGCCTTTGGGTGGTGGGTTGTaGCACTGTCTCCTCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LDATYVDVNNLLPVAQEPLGGGL*HCLLLS Trigger: GGAGAGGAGGAGACAGTGCAACAACCCACCACCCAA...AGGCTCTTGGGCCACTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | ATAATTTGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGATGGTTCCTCCAAACTaGCTTGGCTGCAAGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IICHVVGTGTRFIHRLSLMVPPN*LGCKRL Trigger: GAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCAT...CAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCAAATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | CCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTAAAACTCTGAGGAGATaGAAGTATCCGCCAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PCGRHWNTFHTPSFFVFRKTLRR*KYPPGL Trigger: AAGCCCTGGCGGATACTTCAATCTCCTCAGAGTTTT...ACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | TTACTCAGAGCAGCAAGCAGTCCTAACCAGCAACCCAGACAGGTAACAGCATCTATCCAGTCACCTCTATaGAGACAGGACTTTTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRAASSPNQQPRQVTASIQSPL*RQDFLL Trigger: CAGTAAAAAGTCCTGTCTCAATAGAGGTGACTGGAT...AGATGCTGTTACCTGTCTGGGTTGCTGGTTAGGACTGCTTGCTGCTCTGAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | GTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTGACAGAACTTCCACCTaGCACCCGAGAAATGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: VVGTGTRFIHRLSLSFVIDRTST*HPRNDV Trigger: GACATCATTTCTCGGGTGCAAGGTGGAAGTTCTGTC...AATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | TTTGTCTTTCGTCATTTTTCCCAGTCCCCACGTTCTTTCTCACTGTCAGGTTTTGTAATGGCACTGCTGTaGTGTGTCAAGACACTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FVFRHFSQSPRSFSLSGFVMALL*CVKTLP Trigger: GGGCAGTGTCTTGACACACAACAGCAGTGCCATTAC...AAAACCTGACAGTGAGAAAGAACGTGGGGACTGGGAAAAATGACGAAAGACAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | CCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTAAAGTCTCCTCCATGTaGATCTCCATTCTTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PCGRHWNTFHTPSFFVFRKVSSM*ISILGW Trigger: CCACCCAAGAATGGAGATCAACATGGAGGAGACTTT...ACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048947.15 |
||
| CDS TCA 90 bp | AAATCGATAACAACAGGGTTATACTTTAACGATCTCCCCCAGGACTaGTATGTAATGGCACTGCTGTTGTGTGTCAAGACACTGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KSITTGLYFNDLPQD*YVMALLLCVKTLPQ Trigger: CTGGGGCAGTGTCTTGACACACAACAGCAGTGCCATTACATATCAGTCCTGGGGGAGATCGTTAAAGTATAACCCTGTTGTTATCGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | TGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCTTTCTCCAGTCTCCATaGTACACAGTTTCACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: CHVVGTGTRFIHRLSLSFFLQSP*YTVSHW Trigger: CCAGTGTGAAACTGTGTACAATGGAGACTGGAGAAA...GAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | CCCTCAGCAGTCACTTGGATGCTACATATGTTGATGTTAATAATTTACTCCCAGATGGTTCACCTTCTCTaGTGCAGTTACCCCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSAVTWMLHMLMLIIYSQMVHLL*CSYPRV Trigger: CACCCTGGGGTAACTGCACAAGAGAAGGTGAACCAT...CTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAAGTGACTGCTGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | AGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTTCCAAAACTCTGAGGAGATaGAAGTATCCGCCAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RHWNTFHTPSFFVFRHFSKTLRR*KYPPGL Trigger: AAGCCCTGGCGGATACTTCAATCTCCTCAGAGTTTT...GGAAAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | GGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTTCCCTTTCTGATCCTGGGATaGGTTCATACTGATGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GTGTRFIHRLSLSFVIFPFLILG*VHTDGN Trigger: ATTGCCATCAGTATGAACCAATCCCAGGATCAGAAA...GGGAAAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | GGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCTTTCGTCATTTTACCGCCAATGCATTTTaGGACTTCATCCACAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GRHWNTFHTPSFFVFRHFTANAF*DFIHSS Trigger: ACTACTGTGGATGAAGTCCAAAAATGCATTGGCGGT...AAAATGACGAAAGACAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | TTTGTCTTTCGTCATTTTTCCCAGTCCCCACGTTCTTTCTCACTGTCAGGTTTTTTTCTGATCCTGGGATaGGTTCATACTGATGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FVFRHFSQSPRSFSLSGFFLILG*VHTDGN Trigger: ATTGCCATCAGTATGAACCAATCCCAGGATCAGAAA...AAAACCTGACAGTGAGAAAGAACGTGGGGACTGGGAAAAATGACGAAAGACAAA 42% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | TTTGTCTTTCGTCATTTTTCCCAGTCCCCACGTTCTTTCTCACTGTCAGGTTTTATCCAGTCACCTCTATaGAGACAGGACTTTTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: FVFRHFSQSPRSFSLSGFIQSPL*RQDFLL Trigger: CAGTAAAAAGTCCTGTCTCAATAGAGGTGACTGGAT...AAAACCTGACAGTGAGAAAGAACGTGGGGACTGGGAAAAATGACGAAAGACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | TTGGATGCTACATATGTTGATGTTAATAATTTACTCCCAGTGGCCCAAGAGCCTACCGCCAATGCATTTTaGGACTTCATCCACAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LDATYVDVNNLLPVAQEPTANAF*DFIHSS Trigger: ACTACTGTGGATGAAGTCCAAAAATGCATTGGCGGT...AGGCTCTTGGGCCACTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS TCA 90 bp | CCTTATGTCACGGTCACCATCTCCAGAGTTTTCACAAAACTCTCCTaGTATACCTACTCCTTCAATTGTACTATCCTTAATTCCTATGCC | + |
|
Preference number: 5 (lower is better) Translates to: PYVTVTISRVFTKLS*YTYSFNCTILNSYA Trigger: GGCATAGGAATTAAGGATAGTACAATTGAAGGAGTAGGTATATCAGGAGAGTTTTGTGAAAACTCTGGAGATGGTGACCGTGACATAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | TTGGATGCTACATATGTTGATGTTAATAATTTACTCCCAGTGGCCCAAGAGCCTATCCAGTCACCTCTATaGAGACAGGACTTTTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: LDATYVDVNNLLPVAQEPIQSPL*RQDFLL Trigger: CAGTAAAAAGTCCTGTCTCAATAGAGGTGACTGGAT...AGGCTCTTGGGCCACTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS CCA 90 bp | TCTTCTCATTATACTTGTTTAACTTGTTCAGGAATGAAGATGCTTTaGACCCGGATCCAGTCACCTCTATTGAGACAGGACTTTTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: SSHYTCLTCSGMKML*TRIQSPLLRQDFLL Trigger: CAGTAAAAAGTCCTGTCTCAATAGAGGTGACTGGATCCGGGTCCAAAGCATCTTCATTCCTGAACAAGTTAAACAAGTATAATGAGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | ATAATTTGCCATGTGGTAGGCACTGGAACACGTTTCATACACCGTCTTTCTTTGTCATCCAGCACAATATaGTTCCTTCTCATCTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IICHVVGTGTRFIHRLSLSSSTI*FLLILN Trigger: GTTTAAGATGAGAAGGAACAATATTGTGCTGGATGA...CAAAGAAAGACGGTGTATGAAACGTGTTCCAGTGCCTACCACATGGCAAATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS GCA 90 bp | CATTCCTTCATCCAGCACAATATTGTTCCTTCTCATCTTAAACTGTaGAGTCTGTATCTTTGTAGACACTCTCATGAAGCCATATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HSFIQHNIVPSHLKL*SLYLCRHSHEAISL Trigger: AAGAGATATGGCTTCATGAGAGTGTCTACAAAGATACAGACTGCACAGTTTAAGATGAGAAGGAACAATATTGTGCTGGATGAAGGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS-3UTR CAA 90 bp | CCCTCAGCAGTCACTTGGATGCTACATATGTTGATGTTAATAATTTACTCCCAGTCATCCAGCACAATATaGTTCCTTCTCATCTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSAVTWMLHMLMLIIYSQSSSTI*FLLILN Trigger: GTTTAAGATGAGAAGGAACAATATTGTGCTGGATGA...CTGGGAGTAAATTATTAACATCAACATATGTAGCATCCAAGTGACTGCTGAGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS TCA 72 bp | CGTTCACAGGCCAGGCCCTGCCGGCCCATACTACACTaGCACCGGCAGTTGGTGCCGTCAAGTATGGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSQARPCRPILH*HRQLVPSSMGS Trigger: GGAACCCATACTTGACGGCACCAACTGCCGGTGTCAGTGTAGTATGGGCCGGCAGGGCCTGGCCTGTGAACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS CCA 72 bp | GACACTGCTTGCGGGGTCACAGCTCGGGTGACCCGCTaGTTCACCTTCTCTTGTGCAGTTACCCCAGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: DTACGVTARVTR*FTFSCAVTPGC Trigger: GCACCCTGGGGTAACTGCACAAGAGAAGGTGAACCAGCGGGTCACCCGAGCTGTGACCCCGCAAGCAGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
||
| CDS CAA 72 bp | CTCCAGCAGCTCCAGTGGCCAGCGGCTTTGAAGTCTTaGAGCCCCTCTATCACCGTGCGTTCACAGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LQQLQWPAALKS*SPSITVRSQAR Trigger: CCTGGCCTGTGAACGCACGGTGATAGAGGGGCTCAAAGACTTCAAAGCCGCTGGCCACTGGAGCTGCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS TCA 72 bp | ACTGACAGGACACTGCTTGCGGGGTCACAGCTCGGGTaGCCCGCTGGTTCACCTTCTCTTGTGCAGTTACCC | + |
|
Preference number: 6 (lower is better) Translates to: TDRTLLAGSQLG*PAGSPSLVQLP Trigger: GGGTAACTGCACAAGAGAAGGTGAACCAGCGGGTCACCCGAGCTGTGACCCCGCAAGCAGTGTCCTGTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
||
| CDS CAA 72 bp | GGTCACAGCTCGGGTGACCCGCTGGTTCACCTTCTCTaGTGCAGTTACCCCAGGGTGCCATGCCACCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GHSSGDPLVHLL*CSYPRVPCHQR Trigger: TCTTTGGTGGCATGGCACCCTGGGGTAACTGCACAAGAGAAGGTGAACCAGCGGGTCACCCGAGCTGTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
||
| CDS CAA 90 bp | TGCTTGCGGGGTCACAGCTCGGGTGACCCGCTGGTTCACCTTCTCTaGTGCAGTTACCCCAGGGTGCCATGCCACCAAAGACAAGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: CLRGHSSGDPLVHLL*CSYPRVPCHQRQAK Trigger: TTTGGCTTGTCTTTGGTGGCATGGCACCCTGGGGTAACTGCACAAGAGAAGGTGAACCAGCGGGTCACCCGAGCTGTGACCCCGCAAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
||
| CDS CAA 72 bp | CCATTTGTACCAGTCACTCAACTGACAGGACACTGCTaGCGGGGTCACAGCTCGGGTGACCCGCTGGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PFVPVTQLTGHC*RGHSSGDPLVH Trigger: GTGAACCAGCGGGTCACCCGAGCTGTGACCCCGCAAGCAGTGTCCTGTCAGTTGAGTGACTGGTACAAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
||
| CDS TCA 72 bp | TCCATCAGGTACTGGTCCAAAGCCCGTCGCAGGTTCTaGCGTTTCGTCTCCAGGGGTCCCAAGTTTGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SIRYWSKARRRF*RFVSRGPKFVC Trigger: GCACACAAACTTGGGACCCCTGGAGACGAAACGTCAGAACCTGCGACGGGCTTTGGACCAGTACCTGATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS CCA 72 bp | CCATCCAGGCAGTCGTTATCTCCGTTACACACCAGGTaGCGTTTCAGGCAGCGACCTGTCTCTCTACACTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSRQSLSPLHTR*RFRQRPVSLHW Trigger: CCAGTGTAGAGAGACAGGTCGCTGCCTGAAACGCCACCTGGTGTGTAACGGAGATAACGACTGCCTGGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
||
| CDS GCA 72 bp | GTCTCTCTACACTGGAAATCCTGTCCACACTGTGCTTaGCTTAGACAAGGTGTGGGGCTGTCACAGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VSLHWKSCPHCA*LRQGVGLSQLA Trigger: GGCCAGCTGTGACAGCCCCACACCTTGTCTAAGGCAAGCACAGTGTGGACAGGATTTCCAGTGTAGAGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS GCA 72 bp | CTCCATGTTGATCTCCATTCTTGGGTGGTGGGTTGTTaGACTGTCTCCTCCTCTCCTGGGAACCTCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LHVDLHSWVVGC*TVSSSPGNLLC Trigger: GCAGAGGAGGTTCCCAGGAGAGGAGGAGACAGTGCAACAACCCACCACCCAAGAATGGAGATCAACATGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048947.15 |
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| CDS CCA 72 bp | CACAGCTGGCCTCATCCCAGATATCACCACTGCAGATaGTTCCTCCAAACTTGCTTGGCTGCAAGAGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: HSWPHPRYHHCR*FLQTCLAARGS Trigger: GGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATCTGGGATGAGGCCAGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS CCA 72 bp | GTGCTTGCCTTAGACAAGGTGTGGGGCTGTCACAGCTaGCCTCATCCCAGATATCACCACTGCAGATGGTTC | + |
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Preference number: 6 (lower is better) Translates to: VLALDKVWGCHS*PHPRYHHCRWF Trigger: GAACCATCTGCAGTGGTGATATCTGGGATGAGGCCAGCTGTGACAGCCCCACACCTTGTCTAAGGCAAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS CAA 90 bp | ACAATCTGTCCATTTGTACCAGTCACTCAACTGACAGGACACTGCTaGCGGGGTCACAGCTCGGGTGACCCGCTGGTTCACCTTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: TICPFVPVTQLTGHC*RGHSSGDPLVHLLL Trigger: CAAGAGAAGGTGAACCAGCGGGTCACCCGAGCTGTGACCCCGCAAGCAGTGTCCTGTCAGTTGAGTGACTGGTACAAATGGACAGATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
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| CDS GCA 72 bp | GGCTGTCACAGCTGGCCTCATCCCAGATATCACCACTaGAGATGGTTCCTCCAAACTTGCTTGGCTGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: GCHSWPHPRYHH*RWFLQTCLAAR Trigger: TCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATCTGGGATGAGGCCAGCTGTGACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS CCA 72 bp | ATTTCTCATCCTCCCCATAGTAGAGGCGCTCACAGGTaGGGTCGTACCGCAGCTTTCTCCAGTCTCCATTGT | + |
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Preference number: 6 (lower is better) Translates to: ISHPPHSRGAHR*GRTAAFSSLHC Trigger: ACAATGGAGACTGGAGAAAGCTGCGGTACGACCCCACCTGTGAGCGCCTCTACTATGGGGAGGATGAGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS CAA 90 bp | CTGGCCTCATCCCAGATATCACCACTGCAGATGGTTCCTCCAAACTaGCTTGGCTGCAAGAGGCTCCGGTATCGGTATGGTTCACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LASSQISPLQMVPPN*LGCKRLRYRYGSPS Trigger: AGAAGGTGAACCATACCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATCTGGGATGAGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106808.10 |
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| CDS GCA 72 bp | TCACCACTGCAGATGGTTCCTCCAAACTTGCTTGGCTaGAAGAGGCTCCGGTATCGGTATGGTTCACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SPLQMVPPNLLG*KRLRYRYGSPS Trigger: AGAAGGTGAACCATACCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106808.10 |
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| CDS GCA 72 bp | CCCAGATATCACCACTGCAGATGGTTCCTCCAAACTTaGTTGGCTGCAAGAGGCTCCGGTATCGGTATGGTT | + |
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Preference number: 6 (lower is better) Translates to: PRYHHCRWFLQT*LAARGSGIGMV Trigger: AACCATACCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106808.10 |
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| CDS CCA 72 bp | AAAGTCTCCTCCATGTTGATCTCCATTCTTGGGTGGTaGGTTGTTGCACTGTCTCCTCCTCTCCTGGGAACC | + |
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Preference number: 6 (lower is better) Translates to: KVSSMLISILGW*VVALSPPLLGT Trigger: GGTTCCCAGGAGAGGAGGAGACAGTGCAACAACCCACCACCCAAGAATGGAGATCAACATGGAGGAGACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048947.15 |
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| CDS CCA 72 bp | GATATCACCACTGCAGATGGTTCCTCCAAACTTGCTTaGCTGCAAGAGGCTCCGGTATCGGTATGGTTCACC | + |
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Preference number: 6 (lower is better) Translates to: DITTADGSSKLA*LQEAPVSVWFT Trigger: GGTGAACCATACCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106808.10 |
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| CDS CAA 72 bp | GTGTGTCAAGACACTGCCCCAGACAGAACTTCCACCTaGCACCCGAGAAATGATGTCCTCCACTCCTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: VCQDTAPDRTST*HPRNDVLHSCD Trigger: ATCACAGGAGTGGAGGACATCATTTCTCGGGTGCAAGGTGGAAGTTCTGTCTGGGGCAGTGTCTTGACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS CAA 72 bp | TCCCAGATATCACCACTGCAGATGGTTCCTCCAAACTaGCTTGGCTGCAAGAGGCTCCGGTATCGGTATGGT | + |
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Preference number: 6 (lower is better) Translates to: SQISPLQMVPPN*LGCKRLRYRYG Trigger: ACCATACCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106808.10 |
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| CDS GCA 72 bp | CCCAGATATCACCACTGCAGATGGTTCCTCCAAACTTaGTTGGCTGCAAGAGGCTCCGGTATCGGTACTTTT | + |
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Preference number: 6 (lower is better) Translates to: PRYHHCRWFLQT*LAARGSGIGTF Trigger: AAAAGTACCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
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| CDS GCA 72 bp | TGTGTCAAGACACTGCCCCAGACAGAACTTCCACCTTaGACCCGAGAAATGATGTCCTCCACTCCTGTGATT | + |
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Preference number: 6 (lower is better) Translates to: CVKTLPQTELPP*TREMMSSTPVI Trigger: AATCACAGGAGTGGAGGACATCATTTCTCGGGTGCAAGGTGGAAGTTCTGTCTGGGGCAGTGTCTTGACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS CCA 72 bp | TCAAAAGTCTCCTCCATGTTGATCTCCATTCTTGGGTaGTGGGTTGTTGCACTGTCTCCTCCTCTCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SKVSSMLISILG*WVVALSPPLLG Trigger: TCCCAGGAGAGGAGGAGACAGTGCAACAACCCACCACCCAAGAATGGAGATCAACATGGAGGAGACTTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048947.15 |
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| CDS CAA 72 bp | TCCCAGATATCACCACTGCAGATGGTTCCTCCAAACTaGCTTGGCTGCAAGAGGCTCCGGTATCGGTACTTT | + |
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Preference number: 6 (lower is better) Translates to: SQISPLQMVPPN*LGCKRLRYRYF Trigger: AAAGTACCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
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| CDS CAA 90 bp | ACTGCTGTTGTGTGTCAAGACACTGCCCCAGACAGAACTTCCACCTaGCACCCGAGAAATGATGTCCTCCACTCCTGTGATTTTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: TAVVCQDTAPDRTST*HPRNDVLHSCDFLP Trigger: AGGAAGAAAATCACAGGAGTGGAGGACATCATTTCTCGGGTGCAAGGTGGAAGTTCTGTCTGGGGCAGTGTCTTGACACACAACAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS TCA 72 bp | AAGGCTGCCCTTTCTGATCCTGGGATTGGTTCATACTaGTGGCAATCATCCTCAGTGACCCTGACATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: KAALSDPGIGSY*WQSSSVTLTSS Trigger: TGAAGATGTCAGGGTCACTGAGGATGATTGCCATCAGTATGAACCAATCCCAGGATCAGAAAGGGCAGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS TCA 72 bp | TTGAGTCAGGATGTTGTACCCCAAGGCTGCCCTTTCTaGTCCTGGGATTGGTTCATACTGATGGCAATCATC | + |
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Preference number: 6 (lower is better) Translates to: LSQDVVPQGCPF*SWDWFILMAII Trigger: GATGATTGCCATCAGTATGAACCAATCCCAGGATCAGAAAGGGCAGCCTTGGGGTACAACATCCTGACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS CCA 72 bp | GATATCACCACTGCAGATGGTTCCTCCAAACTTGCTTaGCTGCAAGAGGCTCCGGTATCGGTACTTTTTATC | + |
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Preference number: 6 (lower is better) Translates to: DITTADGSSKLA*LQEAPVSVLFI Trigger: GATAAAAAGTACCGATACCGGAGCCTCTTGCAGCCAAGCAAGTTTGGAGGAACCATCTGCAGTGGTGATATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 |
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| CDS CAA 72 bp | ATAATACTTAGCATCGTAAACACTCTGAGCTTCCTCTaGAGTCAGGATGTTGTACCCCAAGGCTGCCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: IILSIVNTLSFL*SQDVVPQGCPF Trigger: GAAAGGGCAGCCTTGGGGTACAACATCCTGACTCAAGAGGAAGCTCAGAGTGTTTACGATGCTAAGTATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS TCA 72 bp | ACAACAGGGTTATACTTTAACGATCTCCCCCAGGACTaGTATGTAATGGCACTGCTGTTGTGTGTCAAGACA | + |
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Preference number: 6 (lower is better) Translates to: TTGLYFNDLPQD*YVMALLLCVKT Trigger: TGTCTTGACACACAACAGCAGTGCCATTACATATCAGTCCTGGGGGAGATCGTTAAAGTATAACCCTGTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS CCA 72 bp | TATACTTGTTTAACTTGTTCAGGAATGAAGATGCTTTaGACCCGGATCCAGTCACCTCTATTGAGACAGGAC | + |
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Preference number: 6 (lower is better) Translates to: YTCLTCSGMKML*TRIQSPLLRQD Trigger: GTCCTGTCTCAATAGAGGTGACTGGATCCGGGTCCAAAGCATCTTCATTCCTGAACAAGTTAAACAAGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS CAA 72 bp | TTATACTTGTTTAACTTGTTCAGGAATGAAGATGCTTaGGACCCGGATCCAGTCACCTCTATTGAGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: LYLFNLFRNEDA*DPDPVTSIETG Trigger: TCCTGTCTCAATAGAGGTGACTGGATCCGGGTCCAAAGCATCTTCATTCCTGAACAAGTTAAACAAGTATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS CAA 72 bp | CTTAATTCCTATGCCAATGCCACCGCCAATGCATTTTaGGACTTCATCCACAGTAGTACCTTCAGTTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: LNSYANATANAF*DFIHSSTFSFH Trigger: ATGAAAACTGAAGGTACTACTGTGGATGAAGTCCAAAAATGCATTGGCGGTGGCATTGGCATAGGAATTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS GCA 72 bp | ATCCAGCACAATATTGTTCCTTCTCATCTTAAACTGTaGAGTCTGTATCTTTGTAGACACTCTCATGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: IQHNIVPSHLKL*SLYLCRHSHEA Trigger: GGCTTCATGAGAGTGTCTACAAAGATACAGACTGCACAGTTTAAGATGAGAAGGAACAATATTGTGCTGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS CCA 72 bp | TTAATTCCTATGCCAATGCCACCGCCAATGCATTTTTaGACTTCATCCACAGTAGTACCTTCAGTTTTCATT | + |
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Preference number: 6 (lower is better) Translates to: LIPMPMPPPMHF*TSSTVVPSVFI Trigger: AATGAAAACTGAAGGTACTACTGTGGATGAAGTCCAAAAATGCATTGGCGGTGGCATTGGCATAGGAATTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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| CDS TCA 72 bp | ACGGTCACCATCTCCAGAGTTTTCACAAAACTCTCCTaGTATACCTACTCCTTCAATTGTACTATCCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: TVTISRVFTKLS*YTYSFNCTILN Trigger: ATTAAGGATAGTACAATTGAAGGAGTAGGTATATCAGGAGAGTTTTGTGAAAACTCTGGAGATGGTGACCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048947.15 ENSMUST00000064873.9 ENSMUST00000106808.10 |
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