Pregenerated sensors for C6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022181Ensembl transcript IDs: ENSMUST00000022788.15, ENSMUST00000161997.8, ENSMUST00000162350.3, ENSMUST00000162585.8
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATCTCCAGAGCCTTGATCCTCCTCAACAGCCTTGGGAGTCAAGCTaGGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGGAACTCGG | + |
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Preference number: 1 (lower is better) Translates to: YLQSLDPPQQPWESS*AQAQLMSLDVMGTR Trigger: CCGAGTTCCCATGACATCCAAGGACATGAGCTGTGCCTGAGCCCAGCTTGACTCCCAAGGCTGTTGAGGAGGATCAAGGCTCTGGAGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGCAGCAGGCACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCCTTGGGAGTCAAGCTaGGCTCAGGCACAGCTCATG | + |
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Preference number: 2 (lower is better) Translates to: PSSRHFASYLQSLDPPQQPWESS*AQAQLM Trigger: CATGAGCTGTGCCTGAGCCCAGCTTGACTCCCAAGG...CTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCCTGCTGCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| 3UTR CCA 72 bp | AGCCTTGATCCTCCTCAACAGCCTTGGGAGTCAAGCTaGGCTCAGGCACAGCTCATGTCCTTGGATGTCATG | + |
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Preference number: 3 (lower is better) Translates to: SLDPPQQPWESS*AQAQLMSLDVM Trigger: CATGACATCCAAGGACATGAGCTGTGCCTGAGCCCAGCTTGACTCCCAAGGCTGTTGAGGAGGATCAAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| 3UTR TCA 72 bp | AAGCAGCAGGCACTTTGCATCTTATCTCCAGAGCCTTaGTCCTCCTCAACAGCCTTGGGAGTCAAGCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: KQQALCILSPEP*SSSTALGVKLG Trigger: GCCCAGCTTGACTCCCAAGGCTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCCTGCTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| 3UTR CCA 72 bp | TTGTACAAAGAACAAGGGAAAGGACGACTGCTGACATaGGGGCTGAAGTCAGGCGCCAAGCAGCAGGCACTT | + |
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Preference number: 3 (lower is better) Translates to: LYKEQGKGRLLT*GLKSGAKQQAL Trigger: AAGTGCCTGCTGCTTGGCGCCTGACTTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTGTACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| 3UTR-3UTR CAA 90 bp | CAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGGCTGAAGTCAGGCGCCAACTTATCTCCAGAGCCTaGATCCTCCTCAACAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: QRTRERTTADMGAEVRRQLISRA*ILLNSL Trigger: AAGGCTGTTGAGGAGGATCAAGGCTCTGGAGATAAG...TTGGCGCCTGACTTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| 3UTR GCA 72 bp | ATTAAACCTATCAAGGTCTCATTTATTAAGCTGAGGTaGTTTCCTTATAAAGCATACATCGCGGAAAATAGG | + |
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Preference number: 3 (lower is better) Translates to: IKPIKVSFIKLR*FPYKAYIAENR Trigger: CCTATTTTCCGCGATGTATGCTTTATAAGGAAAGCACCTCAGCTTAATAAATGAGACCTTGATAGGTTTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR GCA 90 bp | ATCCTCCTCAACAGCCTTGGGAGTCAAGCTGGGCTCAGGCACAGCTCATGTCCTCACACAGGCATTCCGTaGCTGAGAGCCTGGGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: ILLNSLGSQAGLRHSSCPHTGIP*LRAWGG Trigger: GCCGCCCCAGGCTCTCAGGCACGGAATGCCTGTGTG...AGGACATGAGCTGTGCCTGAGCCCAGCTTGACTCCCAAGGCTGTTGAGGAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR GCA 90 bp | ATCCTCCTCAACAGCCTTGGGAGTCAAGCTGGGCTCAGGCACAGCTCATGTCCTCTCCCAAGCCAAGGCTaGTGCCTGCTGACTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: ILLNSLGSQAGLRHSSCPLPSQG*CLLTPP Trigger: GGGAGGAGTCAGCAGGCAGCAGCCTTGGCTTGGGAG...AGGACATGAGCTGTGCCTGAGCCCAGCTTGACTCCCAAGGCTGTTGAGGAGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR TCA 90 bp | GGACGACTGCTGACATGGGGGCTGAAGTCAGGCGCCAAGCAGCAGGCACTTTGCCAGTCTTCTTCTTGCTaGTCCTTGCCACCACAGCTT | + |
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Preference number: 4 (lower is better) Translates to: GRLLTWGLKSGAKQQALCQSSSC*SLPPQL Trigger: AAGCTGTGGTGGCAAGGATCAGCAAGAAGAAGACTG...GCAAAGTGCCTGCTGCTTGGCGCCTGACTTCAGCCCCCATGTCAGCAGTCGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR GCA 90 bp | CCAAGCAGCAGGCACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCCAAGCCAAGGCTGCTaGCTGCTGACTCCTCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: PSSRHFASYLQSLDPPQQPSQGC*LLTPPA Trigger: GGCGGGAGGAGTCAGCAGGCAGCAGCCTTGGCTTGG...CTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCCTGCTGCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR CCA 90 bp | GGACGACTGCTGACATGGGGGCTGAAGTCAGGCGCCAAGCAGCAGGCACTTTGCGGCAAGGGTCAAACTTaGCTGCATACTCTTGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: GRLLTWGLKSGAKQQALCGKGQT*LHTLEA Trigger: CGCTTCAAGAGTATGCAGCCAAGTTTGACCCTTGCC...GCAAAGTGCCTGCTGCTTGGCGCCTGACTTCAGCCCCCATGTCAGCAGTCGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR CCA 90 bp | ATCCTCCTCAACAGCCTTGGGAGTCAAGCTGGGCTCAGGCACAGCTCATGTCCTTGGGGCGGCCATTATTaGGACATGGAGCACACTGGC | + |
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Preference number: 4 (lower is better) Translates to: ILLNSLGSQAGLRHSSCPWGGHY*DMEHTG Trigger: GCCAGTGTGCTCCATGTCCCAATAATGGCCGCCCCA...AGGACATGAGCTGTGCCTGAGCCCAGCTTGACTCCCAAGGCTGTTGAGGAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR GCA 90 bp | ATAGGGGAGGGGTCGAGGGAGAGTTGTACAAAGAACAAGGGAAAGGACGACTGCCCTCTGGACCAGAGGTaGCCTTCTCCCAAGCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: IGEGSRESCTKNKGKDDCPLDQR*PSPKPR Trigger: CCTTGGCTTGGGAGAAGGGCACCTCTGGTCCAGAGG...GCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTCTCCCTCGACCCCTCCCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR CCA 90 bp | GGGAAAGGACGACTGCTGACATGGGGGCTGAAGTCAGGCGCCAAGCAGCAGGCACAAGAACTTCTCCTCTaGGCTCTCCTGCCAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: GKGRLLTWGLKSGAKQQAQELLL*ALLPEN Trigger: ATTTTCTGGCAGGAGAGCCCAGAGGAGAAGTTCTTG...TGCCTGCTGCTTGGCGCCTGACTTCAGCCCCCATGTCAGCAGTCGTCCTTTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR CCA 90 bp | GGGAAAGGACGACTGCTGACATGGGGGCTGAAGTCAGGCGCCAAGCAGCAGGCAATCAGATTTGTAACCTaGGGACCTGCGCTCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: GKGRLLTWGLKSGAKQQAIRFVT*GPALTV Trigger: AACTGTGAGCGCAGGTCCCCAGGTTACAAATCTGAT...TGCCTGCTGCTTGGCGCCTGACTTCAGCCCCCATGTCAGCAGTCGTCCTTTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR TCA 90 bp | ATCCTCCTCAACAGCCTTGGGAGTCAAGCTGGGCTCAGGCACAGCTCATGTCCTTCTGGGAGAGGTGGTTaGGAACACCCTGATTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ILLNSLGSQAGLRHSSCPSGRGG*EHPDSA Trigger: AGCAGAATCAGGGTGTTCTCAACCACCTCTCCCAGA...AGGACATGAGCTGTGCCTGAGCCCAGCTTGACTCCCAAGGCTGTTGAGGAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| 3UTR CAA 72 bp | ATGGGGGCTGAAGTCAGGCGCCAAGCAGCAGGCACTTaGCATCTTATCTCCAGAGCCTTGATCCTCCTCAAC | + |
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Preference number: 4 (lower is better) Translates to: MGAEVRRQAAGT*HLISRALILLN Trigger: GTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCCTGCTGCTTGGCGCCTGACTTCAGCCCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR GCA 90 bp | CCAAGCAGCAGGCACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCCAGTGCCCATCAGCTaGACACTAGGGATGGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: PSSRHFASYLQSLDPPQQPVPIS*TLGMGV Trigger: CACTCCCATCCCTAGTGTGCAGCTGATGGGCACTGG...CTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCCTGCTGCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR GCA 90 bp | AGCCTTGGGAGTCAAGCTGGGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGTCCTATAAGCAGCATTaGACGCACTCCAGGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: SLGSQAGLRHSSCPWMSWSYKQH*THSRKT Trigger: GGTCTTCCTGGAGTGCGTGCAATGCTGCTTATAGGA...CCATGACATCCAAGGACATGAGCTGTGCCTGAGCCCAGCTTGACTCCCAAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR CCA 90 bp | GCTGGGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGGAACTCGGAAAGAGAGCCATTATTGGGACATaGAGCACACTGGCAAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: AGLRHSSCPWMSWELGKRAIIGT*STLARV Trigger: GACCCTTGCCAGTGTGCTCCATGTCCCAATAATGGC...TCTCTTTCCGAGTTCCCATGACATCCAAGGACATGAGCTGTGCCTGAGCCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| 3UTR CAA 72 bp | CAAGCAGCAGGCACTTTGCATCTTATCTCCAGAGCCTaGATCCTCCTCAACAGCCTTGGGAGTCAAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QAAGTLHLISRA*ILLNSLGSQAG Trigger: CCCAGCTTGACTCCCAAGGCTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCCTGCTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR TCA 90 bp | CAGGCGCCAAGCAGCAGGCACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCTCCTAGGACACAGTTaGTGGGACATGTCTGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: QAPSSRHFASYLQSLDPPLLGHS*WDMSAS Trigger: ACTTGCAGACATGTCCCATCAACTGTGTCCTAGGAG...AGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCCTGCTGCTTGGCGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR TCA 90 bp | GCTGGGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGGAACTCGGAAAGAGACTTGAAGCGCTCTCCTaGGGTTGTTCCGTTTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: AGLRHSSCPWMSWELGKRLEALS*GCSVLS Trigger: TGACAAAACGGAACAACCTCAGGAGAGCGCTTCAAG...TCTCTTTCCGAGTTCCCATGACATCCAAGGACATGAGCTGTGCCTGAGCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR TCA 90 bp | ATAGGGGAGGGGTCGAGGGAGAGTTGTACAAAGAACAAGGGAAAGGACGACTGCTGGTTGAGAACACCCTaGTTCTGCTTCTGGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: IGEGSRESCTKNKGKDDCWLRTP*FCFWLS Trigger: GCTGAGCCAGAAGCAGAATCAGGGTGTTCTCAACCA...GCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTCTCCCTCGACCCCTCCCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR GCA 90 bp | ATCCTCCTCAACAGCCTTGGGAGTCAAGCTGGGCTCAGGCACAGCTCATGTCCTCTACTTGTCTCTGTCTaGTCTGGGTTCCAGAATTGC | + |
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Preference number: 4 (lower is better) Translates to: ILLNSLGSQAGLRHSSCPLLVSV*SGFQNC Trigger: GCAATTCTGGAACCCAGAGCAGACAGAGACAAGTAG...AGGACATGAGCTGTGCCTGAGCCCAGCTTGACTCCCAAGGCTGTTGAGGAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR CCA 90 bp | GTTGTACAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGGCTGAAGTCAGGGGACATGGAGCACACTaGCAAGGGTCAAACTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: VVQRTRERTTADMGAEVRGHGAH*QGSNLA Trigger: AGCCAAGTTTGACCCTTGCCAGTGTGCTCCATGTCC...CCTGACTTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTGTACAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR CCA 90 bp | GGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGGAACTCGGAAAGAGATAGGCAACAACAAAGCCTCTaGGGCATGTCAGCTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: GSGTAHVLGCHGNSERDRQQQSL*GMSAQW Trigger: CCATTGAGCTGACATGCCCCAGAGGCTTTGTTGTTG...CCTATCTCTTTCCGAGTTCCCATGACATCCAAGGACATGAGCTGTGCCTGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGTCTTAGGTGTTAGGAAGGGAATAAGGAGGAAGGGGGTGGCAACCAGCTTGGCTGCATACTCTTaGAGCGCTCTCCTGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: FTVLGVRKGIRRKGVATSLAAYS*SALLRL Trigger: CAACCTCAGGAGAGCGCTTCAAGAGTATGCAGCCAA...GCTGGTTGCCACCCCCTTCCTCCTTATTCCCTTCCTAACACCTAAGACTGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR TCA 90 bp | CCAAGCAGCAGGCACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCATTCCACATCTCCTTaGCTCCAGGTTCTGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PSSRHFASYLQSLDPPQQHSTSP*LQVLSG Trigger: ACCAGACAGAACCTGGAGTCAAGGAGATGTGGAATG...CTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCCTGCTGCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR CCA 90 bp | CCAAGCAGCAGGCACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGGGACCAGTGAGTCCATaGGTAGTGGTCACAGAAACA | + |
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Preference number: 4 (lower is better) Translates to: PSSRHFASYLQSLDPPQQGPVSP*VVVTET Trigger: TGTTTCTGTGACCACTACCCATGGACTCACTGGTCC...CTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCCTGCTGCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR CCA 90 bp | GCTGGGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGGAACTCGGAAAGAGATATTCTAAAGGCAGGTaGACAAGGGCTTTCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: AGLRHSSCPWMSWELGKRYSKGR*TRAFRK Trigger: CTTCCTGAAAGCCCTTGTCCACCTGCCTTTAGAATA...TCTCTTTCCGAGTTCCCATGACATCCAAGGACATGAGCTGTGCCTGAGCCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR CCA 90 bp | CCAAGCAGCAGGCACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGATAGACATTCTCCTCTaGACCAGAGGTGCCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: PSSRHFASYLQSLDPPQQIDILL*TRGALL Trigger: GAGAAGGGCACCTCTGGTCCAGAGGAGAATGTCTAT...CTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCCTGCTGCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR CCA 90 bp | AGCCTTGGGAGTCAAGCTGGGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGTTTTGTCACTGCACATaGGATGTTTCTGACCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: SLGSQAGLRHSSCPWMSWFCHCT*DVSDQV Trigger: GACTTGGTCAGAAACATCCCATGTGCAGTGACAAAA...CCATGACATCCAAGGACATGAGCTGTGCCTGAGCCCAGCTTGACTCCCAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR TCA 90 bp | ACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCCTTGGGAGTCAAACAAGGGTCACAGTCTaGCCATGTCCCATAGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TLHLISRALILLNSLGSQTRVTV*PCPIVS Trigger: GGAGACTATGGGACATGGTCAGACTGTGACCCTTGT...TTGACTCCCAAGGCTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR GCA 90 bp | GAGTTGTACAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGGCTGAAGTCAGACATGTCTGCAAGTTaGACTCTCTGGTCTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ELYKEQGKGRLLTWGLKSDMSAS*TLWSPA Trigger: AGCAGGAGACCAGAGAGTGCAACTTGCAGACATGTC...TGACTTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR GCA 90 bp | CCAAGCAGCAGGCACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCATTGCATTCTAACTTaGTGGGAATACAGCGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PSSRHFASYLQSLDPPQQHCILT*WEYSAH Trigger: GTGGGCGCTGTATTCCCAGCAAGTTAGAATGCAATG...CTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCCTGCTGCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR GCA 90 bp | ATCCTCCTCAACAGCCTTGGGAGTCAAGCTGGGCTCAGGCACAGCTCATGTCCTAGTCATTCTCTCCATTaGATTCTAACTTGCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: ILLNSLGSQAGLRHSSCPSHSLH*ILTCWE Trigger: TTCCCAGCAAGTTAGAATGCAATGGAGAGAATGACT...AGGACATGAGCTGTGCCTGAGCCCAGCTTGACTCCCAAGGCTGTTGAGGAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR GCA 90 bp | GGTCGAGGGAGAGTTGTACAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGCCAGTTTCCATCCACTaGATCAGATTTGTAACCTGG | + |
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Preference number: 4 (lower is better) Translates to: GRGRVVQRTRERTTADMGPVSIH*IRFVTW Trigger: CCAGGTTACAAATCTGATGCAGTGGATGGAAACTGG...CCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTCTCCCTCGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR GCA 90 bp | GAGTTGTACAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGGCTGAAGTCACTTCTTGCTGATCCTTaGCACCACAGCTTTGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: ELYKEQGKGRLLTWGLKSLLADP*HHSFVL Trigger: GAGGACAAAGCTGTGGTGGCAAGGATCAGCAAGAAG...TGACTTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR GCA 90 bp | GGGAGAGTTGTACAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGGCTGAACTCATTCCAGGTAAATaGGTTTTCTGGGAGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GRVVQRTRERTTADMGAELIPGK*VFWERW Trigger: CCACCTCTCCCAGAAAACGCATTTACCTGGAATGAG...TTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR CCA 90 bp | CACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCCTTGGGAGTCATGTCTCTGTCTGCTCTaGGTTCCAGAATTGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: HFASYLQSLDPPQQPWESCLCLL*VPELQD Trigger: GTCCTGCAATTCTGGAACCCAGAGCAGACAGAGACA...TGACTCCCAAGGCTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR CCA 90 bp | CACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCCTTGGGAGTCACCTGGACCAGGGAAATaGATTTCTCTGATCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: HFASYLQSLDPPQQPWESPGPGK*ISLIPA Trigger: TGCAGGGATCAGAGAAATCCATTTCCCTGGTCCAGG...TGACTCCCAAGGCTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR CCA 90 bp | ATAGGGGAGGGGTCGAGGGAGAGTTGTACAAAGAACAAGGGAAAGGACGACTGCATACACTCTCTGAAATaGGGAGATGGTCAGGACATC | + |
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Preference number: 4 (lower is better) Translates to: IGEGSRESCTKNKGKDDCIHSLK*GDGQDI Trigger: GATGTCCTGACCATCTCCCCATTTCAGAGAGTGTAT...GCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTCTCCCTCGACCCCTCCCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR CCA 90 bp | TCCTCCTCAACAGCCTTGGGAGTCAAGCTGGGCTCAGGCACAGCTCATGTCCTTTCAATGAATTTGAAATaGGAGGTGTCCAGGAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SSSTALGVKLGSGTAHVLSMNLK*EVSRSL Trigger: AAGACTCCTGGACACCTCCCATTTCAAATTCATTGA...AAGGACATGAGCTGTGCCTGAGCCCAGCTTGACTCCCAAGGCTGTTGAGGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR TCA 90 bp | GGGAGAGTTGTACAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGGCTGAACTCTGGTCTCCTGCTTaGTACAAAGCTTATCGCATA | + |
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Preference number: 4 (lower is better) Translates to: GRVVQRTRERTTADMGAELWSPA*YKAYRI Trigger: TATGCGATAAGCTTTGTATCAAGCAGGAGACCAGAG...TTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
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| CDS-3UTR TCA 90 bp | CAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGGCTGAAGTCAGGCGCCAAATTTTCCAGATTGGCTaGAACACGGTATGGATTACT | + |
|
Preference number: 4 (lower is better) Translates to: QRTRERTTADMGAEVRRQIFQIG*NTVWIT Trigger: AGTAATCCATACCGTGTTTCAGCCAATCTGGAAAAT...TTGGCGCCTGACTTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGGAACTCGGAAAGAGATAGGGAATCCAGTAAGACATaGAATTTCAACTTCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSGTAHVLGCHGNSERDRESSKT*NFNFLP Trigger: GGGGAGGAAGTTGAAATTTCATGTCTTACTGGATTC...CCTATCTCTTTCCGAGTTCCCATGACATCCAAGGACATGAGCTGTGCCTGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGCAGCAGGCACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCACTCTCTGGTCTCCTaGTTGATACAAAGCTTATCG | + |
|
Preference number: 4 (lower is better) Translates to: PSSRHFASYLQSLDPPQQHSLVS*LIQSLS Trigger: CGATAAGCTTTGTATCAAGCAGGAGACCAGAGAGTG...CTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCCTGCTGCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR GCA 90 bp | CACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCCTTGGGAGTCATTGATGGGACATGTCTaGAAGTTGCACTCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HFASYLQSLDPPQQPWESLMGHV*KLHSLV Trigger: GACCAGAGAGTGCAACTTGCAGACATGTCCCATCAA...TGACTCCCAAGGCTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCCTTGGGAGTCAAGAGTGTATATCCGTGTaGACACTGGCTTTGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLHLISRALILLNSLGSQECISV*TLALSS Trigger: GGAGGACAAAGCCAGTGTGCACACGGATATACACTC...TTGACTCCCAAGGCTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGAGTTGTACAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGGCTGAACAATTTTGCAGAGCTTaGAGGGGACACATGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRVVQRTRERTTADMGAEQFCRA*RGHMVE Trigger: TTCAACCATGTGTCCCCTCCAAGCTCTGCAAAATTG...TTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR TCA 90 bp | GGGGACTGTTATTCAAATTTTACAGTCTTAGGTGTTAGGAAGGGAATAAGGAGGGAGGGGACACATGGTTaGAAGGTCACCAGGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GDCYSNFTVLGVRKGIRREGTHG*KVTRGS Trigger: AGAGCCCCTGGTGACCTTTCAACCATGTGTCCCCTC...CCTCCTTATTCCCTTCCTAACACCTAAGACTGTAAAATTTGAATAACAGTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGGAACTCGGAAAGAGATGTCCTTTCATCCACTaGAAGACTGTCTTCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGLRHSSCPWMSWELGKRCPFIH*KTVFIF Trigger: AAAAATGAAGACAGTCTTTCAGTGGATGAAAGGACA...TCTCTTTCCGAGTTCCCATGACATCCAAGGACATGAGCTGTGCCTGAGCCCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR TCA 90 bp | TTTACAGTCTTAGGTGTTAGGAAGGGAATAAGGAGGAAGGGGGTGGCAACCAGCGGAAATGGATTTCTCTaGTCCCTGCAAAAAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: FTVLGVRKGIRRKGVATSGNGFL*SLQKGT Trigger: GGTTCCTTTTTGCAGGGATCAGAGAAATCCATTTCC...GCTGGTTGCCACCCCCTTCCTCCTTATTCCCTTCCTAACACCTAAGACTGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR TCA 90 bp | TTTACAGTCTTAGGTGTTAGGAAGGGAATAAGGAGGAAGGGGGTGGCAACCAGCACACTCTCGGGTTCTTaGTCTCCTATAAGCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: FTVLGVRKGIRRKGVATSTLSGS*SPISSI Trigger: AATGCTGCTTATAGGAGATCAAGAACCCGAGAGTGT...GCTGGTTGCCACCCCCTTCCTCCTTATTCCCTTCCTAACACCTAAGACTGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR GCA 90 bp | TTTACAGTCTTAGGTGTTAGGAAGGGAATAAGGAGGAAGGGGGTGGCAACCAGCGTTCCGTTTTGTCACTaGACATGGGATGTTTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FTVLGVRKGIRRKGVATSVPFCH*TWDVSD Trigger: GTCAGAAACATCCCATGTGCAGTGACAAAACGGAAC...GCTGGTTGCCACCCCCTTCCTCCTTATTCCCTTCCTAACACCTAAGACTGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGGAACTCGGAAAGAGACTAGAATCCTTCTTGTaGGAAGCTTTAATGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGLRHSSCPWMSWELGKRLESFL*EALMTL Trigger: CAAAGTCATTAAAGCTTCCCACAAGAAGGATTCTAG...TCTCTTTCCGAGTTCCCATGACATCCAAGGACATGAGCTGTGCCTGAGCCCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CCA 90 bp | CACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCCTTGGGAGTCAGGTAAATGCGTTTTCTaGGAGAGGTGGTTGAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: HFASYLQSLDPPQQPWESGKCVF*ERWLRT Trigger: TGTTCTCAACCACCTCTCCCAGAAAACGCATTTACC...TGACTCCCAAGGCTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTGTACAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGGCTGAAGTCATCTGAAATGGGGAGATaGTCAGGACATCCTGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: ELYKEQGKGRLLTWGLKSSEMGR*SGHPEQ Trigger: TTGTTCAGGATGTCCTGACCATCTCCCCATTTCAGA...TGACTTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGGGAGGGGTCGAGGGAGAGTTGTACAAAGAACAAGGGAAAGGACGACTGCTACATATTCCTCCAGTaGAAGAGTTGTCAAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: IGEGSRESCTKNKGKDDCYIFLQ*KSCQEL Trigger: AAGTTCTTGACAACTCTTTCACTGGAGGAATATGTA...GCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTCTCCCTCGACCCCTCCCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGAGTTGTACAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGGCTGAATTTGTACCTCAAAGTTaGCATTTTCCAGATTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRVVQRTRERTTADMGAEFVPQS*HFPDWL Trigger: CAGCCAATCTGGAAAATGTCAACTTTGAGGTACAAA...TTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTCTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTGTACAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGGCTGAAGTCACTTGCATGTATACCTTaGTGGTCCAGCAACAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELYKEQGKGRLLTWGLKSLACIP*WSSNNK Trigger: TTTGTTGTTGCTGGACCATCAAGGTATACATGCAAG...TGACTTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGCAGCAGGCACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGGATTTCTCTGATCCCTaGAAAAAGGAACCTCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSRHFASYLQSLDPPQQDFSDP*KKEPPY Trigger: ATATGGAGGTTCCTTTTTGCAGGGATCAGAGAAATC...CTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCCTGCTGCTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CCA 90 bp | GGGGACTGTTATTCAAATTTTACAGTCTTAGGTGTTAGGAAGGGAATAAGGAGGTATCCGTGTGCACACTaGCTTTGTCCTCCCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GDCYSNFTVLGVRKGIRRYPCAH*LCPPTV Trigger: AACTGTGGGAGGACAAAGCCAGTGTGCACACGGATA...CCTCCTTATTCCCTTCCTAACACCTAAGACTGTAAAATTTGAATAACAGTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCCTTGGGAGTCAATACTGGACACAGTTTTaGGCTTCTTCTTCTGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLHLISRALILLNSLGSQYWTQF*ASSSVK Trigger: TTTAACAGAAGAAGAAGCTCAAAACTGTGTCCAGTA...TTGACTCCCAAGGCTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS TCA 90 bp | CTCACCGTAGGTGCCGCTCTGGCACACACACAGGCATTCCGTGCCTaGGAGCCTGGGGCGGCCATTATTGGGACATGGAGCACACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LTVGAALAHTQAFRA*EPGAAIIGTWSTLA Trigger: TGCCAGTGTGCTCCATGTCCCAATAATGGCCGCCCCAGGCTCTCAGGCACGGAATGCCTGTGTGTGTGCCAGAGCGGCACCTACGGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS TCA 90 bp | TCTGGACCAGAGGTGCCCTTCTCCCAAGCCAAGGCTGCTGCCTGCTaGCTCCTCCCGCCCTGGACCAGGGAAATGGATTTCTCTGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGPEVPFSQAKAAAC*LLPPWTREMDFSDP Trigger: GGGATCAGAGAAATCCATTTCCCTGGTCCAGGGCGGGAGGAGTCAGCAGGCAGCAGCCTTGGCTTGGGAGAAGGGCACCTCTGGTCCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS CCA 90 bp | AGGTGCCGCTCTGGCACACACACAGGCATTCCGTGCCTGAGAGCCTaGGGCGGCCATTATTGGGACATGGAGCACACTGGCAAGGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RCRSGTHTGIPCLRA*GGHYWDMEHTGKGQ Trigger: TTGACCCTTGCCAGTGTGCTCCATGTCCCAATAATGGCCGCCCCAGGCTCTCAGGCACGGAATGCCTGTGTGTGTGCCAGAGCGGCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS GCA 90 bp | ATTCTCCTCTGGACCAGAGGTGCCCTTCTCCCAAGCCAAGGCTGCTaGCTGCTGACTCCTCCCGCCCTGGACCAGGGAAATGGATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILLWTRGALLPSQGC*LLTPPALDQGNGFL Trigger: GAGAAATCCATTTCCCTGGTCCAGGGCGGGAGGAGTCAGCAGGCAGCAGCCTTGGCTTGGGAGAAGGGCACCTCTGGTCCAGAGGAGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS GCA 90 bp | AGTTCTCACCGTAGGTGCCGCTCTGGCACACACACAGGCATTCCGTaGCTGAGAGCCTGGGGCGGCCATTATTGGGACATGGAGCACACT | + |
|
Preference number: 5 (lower is better) Translates to: SSHRRCRSGTHTGIP*LRAWGGHYWDMEHT Trigger: AGTGTGCTCCATGTCCCAATAATGGCCGCCCCAGGCTCTCAGGCACGGAATGCCTGTGTGTGTGCCAGAGCGGCACCTACGGTGAGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS GCA 90 bp | CAGATTTGTAACCTGGGGACCTGCGCTCACAGTTCTCACCGTAGGTaGCGCTCTGGCACACACACAGGCATTCCGTGCCTGAGAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QICNLGTCAHSSHRR*RSGTHTGIPCLRAW Trigger: CCAGGCTCTCAGGCACGGAATGCCTGTGTGTGTGCCAGAGCGGCACCTACGGTGAGAACTGTGAGCGCAGGTCCCCAGGTTACAAATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS GCA 90 bp | CCGATTCTAGCCACTCAGAATAGACATTCTCCTCTGGACCAGAGGTaGCCTTCTCCCAAGCCAAGGCTGCTGCCTGCTGACTCCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PILATQNRHSPLDQR*PSPKPRLLPADSSR Trigger: GCGGGAGGAGTCAGCAGGCAGCAGCCTTGGCTTGGGAGAAGGGCACCTCTGGTCCAGAGGAGAATGTCTATTCTGAGTGGCTAGAATCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS GCA 90 bp | AGCCCCAGTTTCCATCCACTGCATCAGATTTGTAACCTGGGGACCTaGGCTCACAGTTCTCACCGTAGGTGCCGCTCTGGCACACACACA | + |
|
Preference number: 5 (lower is better) Translates to: SPSFHPLHQICNLGT*AHSSHRRCRSGTHT Trigger: TGTGTGTGTGCCAGAGCGGCACCTACGGTGAGAACTGTGAGCGCAGGTCCCCAGGTTACAAATCTGATGCAGTGGATGGAAACTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS CCA 90 bp | ACACACACAGGCATTCCGTGCCTGAGAGCCTGGGGCGGCCATTATTaGGACATGGAGCACACTGGCAAGGGTCAAACTTGGCTGCATACT | + |
|
Preference number: 5 (lower is better) Translates to: THTGIPCLRAWGGHY*DMEHTGKGQTWLHT Trigger: AGTATGCAGCCAAGTTTGACCCTTGCCAGTGTGCTCCATGTCCCAATAATGGCCGCCCCAGGCTCTCAGGCACGGAATGCCTGTGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTTGGGAGTCAAGCTGGGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGGAGGCACGAGGTCCTTaGGCATTCCACATCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLGSQAGLRHSSCPWMSWEARGP*AFHISL Trigger: CAAGGAGATGTGGAATGCCAAAGGACCTCGTGCCTC...CCATGACATCCAAGGACATGAGCTGTGCCTGAGCCCAGCTTGACTCCCAAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | GGCACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCCTTGGGAGTGGAGGGGACACATGGTaGAAAGGTCACCAGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTLHLISRALILLNSLGSGGDTW*KGHQGL Trigger: GAGCCCCTGGTGACCTTTCAACCATGTGTCCCCTCC...ACTCCCAAGGCTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTTGGGAGTCAAGCTGGGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGCTTGGCTGCATACTCTaGAAGCGCTCTCCTGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLGSQAGLRHSSCPWMSWLGCIL*KRSPEV Trigger: AACCTCAGGAGAGCGCTTCAAGAGTATGCAGCCAAG...CCATGACATCCAAGGACATGAGCTGTGCCTGAGCCCAGCTTGACTCCCAAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGAGTTGTACAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGGCTGAACTGGGGCGGCCATTATaGGGACATGGAGCACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRVVQRTRERTTADMGAELGRPL*GHGAHW Trigger: CCAGTGTGCTCCATGTCCCAATAATGGCCGCCCCAG...TTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGGCTGAAGTCAGGCGCCAAGTGTGCACACTGGCTTaGTCCTCCCACAGTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QRTRERTTADMGAEVRRQVCTLA*SSHSSF Trigger: AAAGGAACTGTGGGAGGACAAAGCCAGTGTGCACAC...TTGGCGCCTGACTTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS TCA 90 bp | GGACATGGAGCACACTGGCAAGGGTCAAACTTGGCTGCATACTCTTaGAGCGCTCTCCTGAGGTTGTTCCGTTTTGTCACTGCACATGGG | + |
|
Preference number: 5 (lower is better) Translates to: GHGAHWQGSNLAAYS*SALLRLFRFVTAHG Trigger: CCCATGTGCAGTGACAAAACGGAACAACCTCAGGAGAGCGCTTCAAGAGTATGCAGCCAAGTTTGACCCTTGCCAGTGTGCTCCATGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS TCA 90 bp | TTGTCCTCCTCGCTGTGGCGCAGGGTTATTACACTCTCGGGTTCTTaGTCTCCTATAAGCAGCATTGCACGCACTCCAGGAAGACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSSSLWRRVITLSGS*SPISSIARTPGRPA Trigger: TGCTGGTCTTCCTGGAGTGCGTGCAATGCTGCTTATAGGAGATCAAGAACCCGAGAGTGTAATAACCCTGCGCCACAGCGAGGAGGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS CCA 90 bp | CCAAGGCTGCTGCCTGCTGACTCCTCCCGCCCTGGACCAGGGAAATaGATTTCTCTGATCCCTGCAAAAAGGAACCTCCATATTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRLLPADSSRPGPGK*ISLIPAKRNLHIFQ Trigger: CTGAAAAATATGGAGGTTCCTTTTTGCAGGGATCAGAGAAATCCATTTCCCTGGTCCAGGGCGGGAGGAGTCAGCAGGCAGCAGCCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | GGACGACTGCTGACATGGGGGCTGAAGTCAGGCGCCAAGCAGCAGGCACTTTGCTATTTTTCAGACAGCTaGTTTTTGGTGCACGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRLLTWGLKSGAKQQALCYFSDS*FLVHVS Trigger: AGACACGTGCACCAAAAACAAGCTGTCTGAAAAATA...GCAAAGTGCCTGCTGCTTGGCGCCTGACTTCAGCCCCCATGTCAGCAGTCGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | GGTCGAGGGAGAGTTGTACAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGAGCGCTCTCCTGAGGTaGTTCCGTTTTGTCACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRGRVVQRTRERTTADMGSALLR*FRFVTA Trigger: TGCAGTGACAAAACGGAACAACCTCAGGAGAGCGCT...CCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTCTCCCTCGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | ATAGGGGAGGGGTCGAGGGAGAGTTGTACAAAGAACAAGGGAAAGGACGACTGCGCATTCCACATCTCCTaGACTCCAGGTTCTGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IGEGSRESCTKNKGKDDCAFHIS*TPGSVW Trigger: CCAGACAGAACCTGGAGTCAAGGAGATGTGGAATGC...GCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTCTCCCTCGACCCCTCCCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS TCA 90 bp | GCGGCTGAATTGGTAGATAAGGTCATACTTGCCCCCAAGGGAGCCTaGGGTGAAGTAGTGGGTCCCGAAGTCATCAAATATCCGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: AAELVDKVILAPKGA*GEVVGPEVIKYPAV Trigger: TACAGCCGGATATTTGATGACTTCGGGACCCACTACTTCACCTCAGGCTCCCTTGGGGGCAAGTATGACCTTATCTACCAATTCAGCCGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGGAACTCGGAAAGAGACCTCCAGTGAAAGAGTaGTCAAGAACTTCTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGLRHSSCPWMSWELGKRPPVKE*SRTSPL Trigger: CAGAGGAGAAGTTCTTGACAACTCTTTCACTGGAGG...TCTCTTTCCGAGTTCCCATGACATCCAAGGACATGAGCTGTGCCTGAGCCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTTGGGAGTCAAGCTGGGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGCCTTGCATGTATACCTaGATGGTCCAGCAACAACAA | + |
|
Preference number: 5 (lower is better) Translates to: SLGSQAGLRHSSCPWMSWPCMYT*MVQQQQ Trigger: TTGTTGTTGCTGGACCATCAAGGTATACATGCAAGG...CCATGACATCCAAGGACATGAGCTGTGCCTGAGCCCAGCTTGACTCCCAAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS GCA 90 bp | GCCATTATTGGGACATGGAGCACACTGGCAAGGGTCAAACTTGGCTaGATACTCTTGAAGCGCTCTCCTGAGGTTGTTCCGTTTTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: AIIGTWSTLARVKLG*ILLKRSPEVVPFCH Trigger: GTGACAAAACGGAACAACCTCAGGAGAGCGCTTCAAGAGTATGCAGCCAAGTTTGACCCTTGCCAGTGTGCTCCATGTCCCAATAATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS CCA 90 bp | GCATGTCAGCTCAATGGATTCCCCAATCTGATACACTCTCTGAAATaGGGAGATGGTCAGGACATCCTGAACAACGGGCTTGAGGCACGA | + |
|
Preference number: 5 (lower is better) Translates to: ACQLNGFPNLIHSLK*GDGQDILNNGLEAR Trigger: TCGTGCCTCAAGCCCGTTGTTCAGGATGTCCTGACCATCTCCCCATTTCAGAGAGTGTATCAGATTGGGGAATCCATTGAGCTGACATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS TCA 90 bp | TGCCTGCTGACTCCTCCCGCCCTGGACCAGGGAAATGGATTTCTCTaGTCCCTGCAAAAAGGAACCTCCATATTTTTCAGACAGCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CLLTPPALDQGNGFL*SLQKGTSIFFRQLV Trigger: AACAAGCTGTCTGAAAAATATGGAGGTTCCTTTTTGCAGGGATCAGAGAAATCCATTTCCCTGGTCCAGGGCGGGAGGAGTCAGCAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS TCA 90 bp | ACAACGGGCTTGAGGCACGAGGTCCTTTGGCATTCCACATCTCCTTaGCTCCAGGTTCTGTCTGGTAAACATCTCAAGTACTGGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: TTGLRHEVLWHSTSP*LQVLSGKHLKYWNP Trigger: TGGATTCCAGTACTTGAGATGTTTACCAGACAGAACCTGGAGTCAAGGAGATGTGGAATGCCAAAGGACCTCGTGCCTCAAGCCCGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGGAACTCGGAAAGAGATAGGTTAGTCTCTTCAATTTaGCAGAGCTTGGAGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GSGTAHVLGCHGNSERDRLVSSI*QSLEGT Trigger: TGTCCCCTCCAAGCTCTGCAAAATTGAAGAGACTAA...CCTATCTCTTTCCGAGTTCCCATGACATCCAAGGACATGAGCTGTGCCTGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGGAACTCGGAAAGAGATAGGTACACTCTCGGGTTCTaGATCTCCTATAAGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSGTAHVLGCHGNSERDRYTLGF*ISYKQH Trigger: ATGCTGCTTATAGGAGATCAAGAACCCGAGAGTGTA...CCTATCTCTTTCCGAGTTCCCATGACATCCAAGGACATGAGCTGTGCCTGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | GGCACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCCTTGGGAGTTGTACAGTCTTCTTCTaGCTGATCCTTGCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: GTLHLISRALILLNSLGSCTVFF*LILATT Trigger: TGTGGTGGCAAGGATCAGCAAGAAGAAGACTGTACA...ACTCCCAAGGCTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS GCA 90 bp | CACAGGTCAATGAATTTGAAATGGGAGGTGTCCAGGAGTCTTCCTTaGATGTATACCTTGATGGTCCAGCAACAACAAAGCCTCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HRSMNLKWEVSRSLP*MYTLMVQQQQSLWG Trigger: GCCCCAGAGGCTTTGTTGTTGCTGGACCATCAAGGTATACATGCAAGGAAGACTCCTGGACACCTCCCATTTCAAATTCATTGACCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS GCA 90 bp | CTAATCTGGGCACCTCCCAGGGTTCAGTATTTCCACCTTTATGTTTaGACACCTCACCGCTCCCAGCGTACAGATGTTTACTGTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LIWAPPRVQYFHLYV*TPHRSQRTDVYCFL Trigger: GAGAAAACAGTAAACATCTGTACGCTGGGAGCGGTGAGGTGTGCAAACATAAAGGTGGAAATACTGAACCCTGGGAGGTGCCCAGATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162350.3 |
||
| CDS CCA 90 bp | GGTTCCAGAATTGCAGGACTTAGAACAGCTGGACCAGTGAGTCCATaGGTAGTGGTCACAGAAACAGGCTTCACTCTTGTCAATCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSRIAGLRTAGPVSP*VVVTETGFTLVNQH Trigger: ATGCTGATTGACAAGAGTGAAGCCTGTTTCTGTGACCACTACCCATGGACTCACTGGTCCAGCTGTTCTAAGTCCTGCAATTCTGGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022788.15 ENSMUST00000161997.8 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGGCTCAGGCACAGCTCATGTCCTTGGATGTCATGGGAACTCGGAAAGAGAGTTTGTACCTCAAAGTaGACATTTTCCAGATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGLRHSSCPWMSWELGKRVCTSK*TFSRLA Trigger: AGCCAATCTGGAAAATGTCAACTTTGAGGTACAAAC...TCTCTTTCCGAGTTCCCATGACATCCAAGGACATGAGCTGTGCCTGAGCCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGTCTTAGGTGTTAGGAAGGGAATAAGGAGGAAGGGGGTGGCAACCAGCTCAGACAGCTTGTTTTaGGTGCACGTGTCTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FTVLGVRKGIRRKGVATSSDSLF*VHVSSL Trigger: CAAGGAAGACACGTGCACCAAAAACAAGCTGTCTGA...GCTGGTTGCCACCCCCTTCCTCCTTATTCCCTTCCTAACACCTAAGACTGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | GAGTTGTACAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGGCTGAAGTCAGTCCAGGAGTCTTCCTaGCATGTATACCTTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: ELYKEQGKGRLLTWGLKSVQESS*HVYLDG Trigger: ACCATCAAGGTATACATGCAAGGAAGACTCCTGGAC...TGACTTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTGTACAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | CACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCCTTGGGAGTCACACAGGTCAATGAATTaGAAATGGGAGGTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HFASYLQSLDPPQQPWESHRSMN*KWEVSR Trigger: CCTGGACACCTCCCATTTCAAATTCATTGACCTGTG...TGACTCCCAAGGCTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS GCA 90 bp | TGCATACTCTTGAAGCGCTCTCCTGAGGTTGTTCCGTTTTGTCACTaGACATGGGATGTTTCTGACCAAGTCTGTAATTGGGGCAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CILLKRSPEVVPFCH*TWDVSDQVCNWGKL Trigger: AAGCTTGCCCCAATTACAGACTTGGTCAGAAACATCCCATGTGCAGTGACAAAACGGAACAACCTCAGGAGAGCGCTTCAAGAGTATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS CCA 90 bp | CTTCCTTGCATGTATACCTTGATGGTCCAGCAACAACAAAGCCTCTaGGGCATGTCAGCTCAATGGATTCCCCAATCTGATACACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPCMYTLMVQQQQSL*GMSAQWIPQSDTLS Trigger: AGAGAGTGTATCAGATTGGGGAATCCATTGAGCTGACATGCCCCAGAGGCTTTGTTGTTGCTGGACCATCAAGGTATACATGCAAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS CCA 90 bp | GCAAGTTTTAGCCTCTCAAGGCCCCATTCTAACTGTAGGCCTTCTTaGCAGGAACCAGAATGGACAAAGTGGGACTGGGTGTTGTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: ASFSLSRPHSNCRPS*QEPEWTKWDWVLFK Trigger: TTTAAACAACACCCAGTCCCACTTTGTCCATTCTGGTTCCTGCCAAGAAGGCCTACAGTTAGAATGGGGCCTTGAGAGGCTAAAACTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162350.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGAACAAGGGAAAGGACGACTGCTGACATGGGGGCTGAAGTCAGGCGCCAACAGAGGAACTTATTCTaGCAGTTAGTCTCTTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: QRTRERTTADMGAEVRRQQRNLF*QLVSSI Trigger: AATTGAAGAGACTAACTGCAAGAATAAGTTCCTCTG...TTGGCGCCTGACTTCAGCCCCCATGTCAGCAGTCGTCCTTTCCCTTGTTCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS-3UTR CAA 90 bp | GGCACTTTGCATCTTATCTCCAGAGCCTTGATCCTCCTCAACAGCCTTGGGAGTTTGACATTTTCCAGATaGGCTGAAACACGGTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTLHLISRALILLNSLGSLTFSR*AETRYG Trigger: TCCATACCGTGTTTCAGCCAATCTGGAAAATGTCAA...ACTCCCAAGGCTGTTGAGGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162585.8 |
||
| CDS TCA 90 bp | AGTTTCTTCTCATTCCAGGTAAATGCGTTTTCTGGGAGAGGTGGTTaGGAACACCCTGATTCTGCTTCTGGCTCAGCAAGGTCTACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SFFSFQVNAFSGRGG*EHPDSASGSARSTS Trigger: AGAAGTAGACCTTGCTGAGCCAGAAGCAGAATCAGGGTGTTCTCAACCACCTCTCCCAGAAAACGCATTTACCTGGAATGAGAAGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS TCA 90 bp | CACCGCTCCCAGCGTACAGATGTTTACTGTTTTCTCACGCATCGATaGCCCTATCTTTACACAGTAGAGTTGGTTTTCATCCTTGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HRSQRTDVYCFLTHR*PYLYTVELVFILGA Trigger: TGCTCCAAGGATGAAAACCAACTCTACTGTGTAAAGATAGGGTCATCGATGCGTGAGAAAACAGTAAACATCTGTACGCTGGGAGCGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162350.3 |
||
| CDS CCA 90 bp | CTCTTGAAGCGCTCTCCTGAGGTTGTTCCGTTTTGTCACTGCACATaGGATGTTTCTGACCAAGTCTGTAATTGGGGCAAGCTTATAATC | + |
|
Preference number: 5 (lower is better) Translates to: LLKRSPEVVPFCHCT*DVSDQVCNWGKLII Trigger: GATTATAAGCTTGCCCCAATTACAGACTTGGTCAGAAACATCCCATGTGCAGTGACAAAACGGAACAACCTCAGGAGAGCGCTTCAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CCA 90 bp | CCGTTTTGTCACTGCACATGGGATGTTTCTGACCAAGTCTGTAATTaGGGCAAGCTTATAATCAACTACAGCAGGGTTTTCCTTCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: PFCHCTWDVSDQVCN*GKLIINYSRVFLHR Trigger: TCGGTGAAGGAAAACCCTGCTGTAGTTGATTATAAGCTTGCCCCAATTACAGACTTGGTCAGAAACATCCCATGTGCAGTGACAAAACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS TCA 90 bp | ATCTTCTATAGTTTGTACCTCAAAGTTGACATTTTCCAGATTGGCTaGAACACGGTATGGATTACTGGCTCGACTGGTCTTGACAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IFYSLYLKVDIFQIG*NTVWITGSTGLDKF Trigger: AAACTTGTCAAGACCAGTCGAGCCAGTAATCCATACCGTGTTTCAGCCAATCTGGAAAATGTCAACTTTGAGGTACAAACTATAGAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022788.15 ENSMUST00000161997.8 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS TCA 90 bp | TTCTTCATCATCATTGATACATGGTTGTCCAACATTTTCCATTATTaGGACTGTACAGTCTTCTTCTTGCTGATCCTTGCCACCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FFIIIDTWLSNIFHY*DCTVFFLLILATTA Trigger: AGCTGTGGTGGCAAGGATCAGCAAGAAGAAGACTGTACAGTCTCAATAATGGAAAATGTTGGACAACCATGTATCAATGATGATGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS TCA 90 bp | AGTGAAATACTGGCTGGATCCCCCATCAAATATACAGAGATCTTCTaGATAAGCACTACAGTCTTCTTCTGGGGACATACAAATACACTT | + |
|
Preference number: 5 (lower is better) Translates to: SEILAGSPIKYTEIF*ISTTVFFWGHTNTL Trigger: AAGTGTATTTGTATGTCCCCAGAAGAAGACTGTAGTGCTTATTCAGAAGATCTCTGTATATTTGATGGGGGATCCAGCCAGTATTTCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162350.3 |
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| CDS GCA 72 bp | CTCTGGACCAGAGGTGCCCTTCTCCCAAGCCAAGGCTaGTGCCTGCTGACTCCTCCCGCCCTGGACCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LWTRGALLPSQG*CLLTPPALDQG Trigger: TCCCTGGTCCAGGGCGGGAGGAGTCAGCAGGCAGCAGCCTTGGCTTGGGAGAAGGGCACCTCTGGTCCAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS TCA 72 bp | GGTGCCGCTCTGGCACACACACAGGCATTCCGTGCCTaGGAGCCTGGGGCGGCCATTATTGGGACATGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GAALAHTQAFRA*EPGAAIIGTWS Trigger: GCTCCATGTCCCAATAATGGCCGCCCCAGGCTCTCAGGCACGGAATGCCTGTGTGTGTGCCAGAGCGGCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS GCA 72 bp | TGGACCAGAGGTGCCCTTCTCCCAAGCCAAGGCTGCTaGCTGCTGACTCCTCCCGCCCTGGACCAGGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: WTRGALLPSQGC*LLTPPALDQGN Trigger: ATTTCCCTGGTCCAGGGCGGGAGGAGTCAGCAGGCAGCAGCCTTGGCTTGGGAGAAGGGCACCTCTGGTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS GCA 72 bp | CGTAGGTGCCGCTCTGGCACACACACAGGCATTCCGTaGCTGAGAGCCTGGGGCGGCCATTATTGGGACATG | + |
|
Preference number: 6 (lower is better) Translates to: RRCRSGTHTGIP*LRAWGGHYWDM Trigger: CATGTCCCAATAATGGCCGCCCCAGGCTCTCAGGCACGGAATGCCTGTGTGTGTGCCAGAGCGGCACCTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS GCA 72 bp | AACCTGGGGACCTGCGCTCACAGTTCTCACCGTAGGTaGCGCTCTGGCACACACACAGGCATTCCGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: NLGTCAHSSHRR*RSGTHTGIPCL Trigger: CAGGCACGGAATGCCTGTGTGTGTGCCAGAGCGGCACCTACGGTGAGAACTGTGAGCGCAGGTCCCCAGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS CCA 72 bp | TCTGGCACACACACAGGCATTCCGTGCCTGAGAGCCTaGGGCGGCCATTATTGGGACATGGAGCACACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGTHTGIPCLRA*GGHYWDMEHTG Trigger: GCCAGTGTGCTCCATGTCCCAATAATGGCCGCCCCAGGCTCTCAGGCACGGAATGCCTGTGTGTGTGCCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS CCA 72 bp | GGCATTCCGTGCCTGAGAGCCTGGGGCGGCCATTATTaGGACATGGAGCACACTGGCAAGGGTCAAACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GIPCLRAWGGHY*DMEHTGKGQTW Trigger: CCAAGTTTGACCCTTGCCAGTGTGCTCCATGTCCCAATAATGGCCGCCCCAGGCTCTCAGGCACGGAATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS CAA 90 bp | CACACACACAGGCATTCCGTGCCTGAGAGCCTGGGGCGGCCATTATaGGGACATGGAGCACACTGGCAAGGGTCAAACTTGGCTGCATAC | + |
|
Preference number: 6 (lower is better) Translates to: HTHRHSVPESLGRPL*GHGAHWQGSNLAAY Trigger: GTATGCAGCCAAGTTTGACCCTTGCCAGTGTGCTCCATGTCCCAATAATGGCCGCCCCAGGCTCTCAGGCACGGAATGCCTGTGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS GCA 72 bp | GCCACTCAGAATAGACATTCTCCTCTGGACCAGAGGTaGCCTTCTCCCAAGCCAAGGCTGCTGCCTGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: ATQNRHSPLDQR*PSPKPRLLPAD Trigger: GTCAGCAGGCAGCAGCCTTGGCTTGGGAGAAGGGCACCTCTGGTCCAGAGGAGAATGTCTATTCTGAGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS CAA 72 bp | AGGCATTCCGTGCCTGAGAGCCTGGGGCGGCCATTATaGGGACATGGAGCACACTGGCAAGGGTCAAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: RHSVPESLGRPL*GHGAHWQGSNL Trigger: CAAGTTTGACCCTTGCCAGTGTGCTCCATGTCCCAATAATGGCCGCCCCAGGCTCTCAGGCACGGAATGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS GCA 72 bp | TTCCATCCACTGCATCAGATTTGTAACCTGGGGACCTaGGCTCACAGTTCTCACCGTAGGTGCCGCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FHPLHQICNLGT*AHSSHRRCRSG Trigger: GCCAGAGCGGCACCTACGGTGAGAACTGTGAGCGCAGGTCCCCAGGTTACAAATCTGATGCAGTGGATGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS GCA 72 bp | GGGACATGGAGCACACTGGCAAGGGTCAAACTTGGCTaGATACTCTTGAAGCGCTCTCCTGAGGTTGTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GTWSTLARVKLG*ILLKRSPEVVP Trigger: CGGAACAACCTCAGGAGAGCGCTTCAAGAGTATGCAGCCAAGTTTGACCCTTGCCAGTGTGCTCCATGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS CCA 72 bp | CTGCCTGCTGACTCCTCCCGCCCTGGACCAGGGAAATaGATTTCTCTGATCCCTGCAAAAAGGAACCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LPADSSRPGPGK*ISLIPAKRNLH Trigger: ATGGAGGTTCCTTTTTGCAGGGATCAGAGAAATCCATTTCCCTGGTCCAGGGCGGGAGGAGTCAGCAGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS TCA 72 bp | ATGGGGAGATGGTCAGGACATCCTGAACAACGGGCTTaGGGCACGAGGTCCTTTGGCATTCCACATCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: MGRWSGHPEQRA*GTRSFGIPHLL Trigger: AAGGAGATGTGGAATGCCAAAGGACCTCGTGCCTCAAGCCCGTTGTTCAGGATGTCCTGACCATCTCCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS CAA 72 bp | CTCGCTGTGGCGCAGGGTTATTACACTCTCGGGTTCTaGATCTCCTATAAGCAGCATTGCACGCACTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LAVAQGYYTLGF*ISYKQHCTHSR Trigger: CCTGGAGTGCGTGCAATGCTGCTTATAGGAGATCAAGAACCCGAGAGTGTAATAACCCTGCGCCACAGCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS CAA 90 bp | GGGACATGGAGCACACTGGCAAGGGTCAAACTTGGCTGCATACTCTaGAAGCGCTCTCCTGAGGTTGTTCCGTTTTGTCACTGCACATGG | + |
|
Preference number: 6 (lower is better) Translates to: GTWSTLARVKLGCIL*KRSPEVVPFCHCTW Trigger: CCATGTGCAGTGACAAAACGGAACAACCTCAGGAGAGCGCTTCAAGAGTATGCAGCCAAGTTTGACCCTTGCCAGTGTGCTCCATGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS CAA 90 bp | TTTGTCCTCCTCGCTGTGGCGCAGGGTTATTACACTCTCGGGTTCTaGATCTCCTATAAGCAGCATTGCACGCACTCCAGGAAGACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FVLLAVAQGYYTLGF*ISYKQHCTHSRKTS Trigger: GCTGGTCTTCCTGGAGTGCGTGCAATGCTGCTTATAGGAGATCAAGAACCCGAGAGTGTAATAACCCTGCGCCACAGCGAGGAGGACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS TCA 72 bp | TCGCTGTGGCGCAGGGTTATTACACTCTCGGGTTCTTaGTCTCCTATAAGCAGCATTGCACGCACTCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SLWRRVITLSGS*SPISSIARTPG Trigger: TCCTGGAGTGCGTGCAATGCTGCTTATAGGAGATCAAGAACCCGAGAGTGTAATAACCCTGCGCCACAGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
||
| CDS CAA 72 bp | ACAGTCTTCTTCTTGCTGATCCTTGCCACCACAGCTTaGTCCTCCTCGCTGTGGCGCAGGGTTATTACACTC | + |
|
Preference number: 6 (lower is better) Translates to: TVFFLLILATTA*SSSLWRRVITL Trigger: GAGTGTAATAACCCTGCGCCACAGCGAGGAGGACAAAGCTGTGGTGGCAAGGATCAGCAAGAAGAAGACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS TCA 72 bp | GCACACTGGCAAGGGTCAAACTTGGCTGCATACTCTTaGAGCGCTCTCCTGAGGTTGTTCCGTTTTGTCACT | + |
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Preference number: 6 (lower is better) Translates to: AHWQGSNLAAYS*SALLRLFRFVT Trigger: AGTGACAAAACGGAACAACCTCAGGAGAGCGCTTCAAGAGTATGCAGCCAAGTTTGACCCTTGCCAGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CAA 72 bp | AGCACACTGGCAAGGGTCAAACTTGGCTGCATACTCTaGAAGCGCTCTCCTGAGGTTGTTCCGTTTTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: STLARVKLGCIL*KRSPEVVPFCH Trigger: GTGACAAAACGGAACAACCTCAGGAGAGCGCTTCAAGAGTATGCAGCCAAGTTTGACCCTTGCCAGTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS TCA 72 bp | GGTCAAACTTGGCTGCATACTCTTGAAGCGCTCTCCTaGGGTTGTTCCGTTTTGTCACTGCACATGGGATGT | + |
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Preference number: 6 (lower is better) Translates to: GQTWLHTLEALS*GCSVLSLHMGC Trigger: ACATCCCATGTGCAGTGACAAAACGGAACAACCTCAGGAGAGCGCTTCAAGAGTATGCAGCCAAGTTTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS TCA 72 bp | TCATTCCAGGTAAATGCGTTTTCTGGGAGAGGTGGTTaGGAACACCCTGATTCTGCTTCTGGCTCAGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: SFQVNAFSGRGG*EHPDSASGSAR Trigger: CCTTGCTGAGCCAGAAGCAGAATCAGGGTGTTCTCAACCACCTCTCCCAGAAAACGCATTTACCTGGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CCA 72 bp | ATTGCAGGACTTAGAACAGCTGGACCAGTGAGTCCATaGGTAGTGGTCACAGAAACAGGCTTCACTCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: IAGLRTAGPVSP*VVVTETGFTLV Trigger: GACAAGAGTGAAGCCTGTTTCTGTGACCACTACCCATGGACTCACTGGTCCAGCTGTTCTAAGTCCTGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022788.15 ENSMUST00000161997.8 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CCA 72 bp | CGCTCTCCTGAGGTTGTTCCGTTTTGTCACTGCACATaGGATGTTTCTGACCAAGTCTGTAATTGGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: RSPEVVPFCHCT*DVSDQVCNWGK Trigger: CTTGCCCCAATTACAGACTTGGTCAGAAACATCCCATGTGCAGTGACAAAACGGAACAACCTCAGGAGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CCA 72 bp | CAGCAACAACAAAGCCTCTGGGGCATGTCAGCTCAATaGATTCCCCAATCTGATACACTCTCTGAAATGGGG | + |
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Preference number: 6 (lower is better) Translates to: QQQQSLWGMSAQ*IPQSDTLSEMG Trigger: CCCCATTTCAGAGAGTGTATCAGATTGGGGAATCCATTGAGCTGACATGCCCCAGAGGCTTTGTTGTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS TCA 72 bp | TTGAGGCACGAGGTCCTTTGGCATTCCACATCTCCTTaGCTCCAGGTTCTGTCTGGTAAACATCTCAAGTAC | + |
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Preference number: 6 (lower is better) Translates to: LRHEVLWHSTSP*LQVLSGKHLKY Trigger: GTACTTGAGATGTTTACCAGACAGAACCTGGAGTCAAGGAGATGTGGAATGCCAAAGGACCTCGTGCCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CAA 90 bp | AATTTGAAATGGGAGGTGTCCAGGAGTCTTCCTTGCATGTATACCTaGATGGTCCAGCAACAACAAAGCCTCTGGGGCATGTCAGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: NLKWEVSRSLPCMYT*MVQQQQSLWGMSAQ Trigger: TTGAGCTGACATGCCCCAGAGGCTTTGTTGTTGCTGGACCATCAAGGTATACATGCAAGGAAGACTCCTGGACACCTCCCATTTCAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CAA 90 bp | TCACAGGTCAATGAATTTGAAATGGGAGGTGTCCAGGAGTCTTCCTaGCATGTATACCTTGATGGTCCAGCAACAACAAAGCCTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SQVNEFEMGGVQESS*HVYLDGPATTKPLG Trigger: CCCCAGAGGCTTTGTTGTTGCTGGACCATCAAGGTATACATGCAAGGAAGACTCCTGGACACCTCCCATTTCAAATTCATTGACCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CAA 90 bp | AACTTGCTGGGAATACAGCGCCCACTGTCACAGAGGAACTTATTCTaGCAGTTAGTCTCTTCAATTTTGCAGAGCTTGGAGGGGACACAT | + |
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Preference number: 6 (lower is better) Translates to: NLLGIQRPLSQRNLF*QLVSSILQSLEGTH Trigger: ATGTGTCCCCTCCAAGCTCTGCAAAATTGAAGAGACTAACTGCAAGAATAAGTTCCTCTGTGACAGTGGGCGCTGTATTCCCAGCAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022788.15 ENSMUST00000161997.8 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS GCA 72 bp | TTGAAGCGCTCTCCTGAGGTTGTTCCGTTTTGTCACTaGACATGGGATGTTTCTGACCAAGTCTGTAATTGG | + |
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Preference number: 6 (lower is better) Translates to: LKRSPEVVPFCH*TWDVSDQVCNW Trigger: CCAATTACAGACTTGGTCAGAAACATCCCATGTGCAGTGACAAAACGGAACAACCTCAGGAGAGCGCTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CCA 72 bp | CTCCACAGTCATTCTCTCCATTGCATTCTAACTTGCTaGGAATACAGCGCCCACTGTCACAGAGGAACTTAT | + |
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Preference number: 6 (lower is better) Translates to: LHSHSLHCILTC*EYSAHCHRGTY Trigger: ATAAGTTCCTCTGTGACAGTGGGCGCTGTATTCCCAGCAAGTTAGAATGCAATGGAGAGAATGACTGTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022788.15 ENSMUST00000161997.8 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CCA 72 bp | ATGTATACCTTGATGGTCCAGCAACAACAAAGCCTCTaGGGCATGTCAGCTCAATGGATTCCCCAATCTGAT | + |
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Preference number: 6 (lower is better) Translates to: MYTLMVQQQQSL*GMSAQWIPQSD Trigger: ATCAGATTGGGGAATCCATTGAGCTGACATGCCCCAGAGGCTTTGTTGTTGCTGGACCATCAAGGTATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CAA 72 bp | GGAATACAGCGCCCACTGTCACAGAGGAACTTATTCTaGCAGTTAGTCTCTTCAATTTTGCAGAGCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GIQRPLSQRNLF*QLVSSILQSLE Trigger: CTCCAAGCTCTGCAAAATTGAAGAGACTAACTGCAAGAATAAGTTCCTCTGTGACAGTGGGCGCTGTATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022788.15 ENSMUST00000161997.8 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CAA 72 bp | AGTCATAGCAGGTGTTGTATCCACAGGACACTCTCTTaGTGCTATTCACTGCAAGTTTTAGCCTCTCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: SHSRCCIHRTLS*CYSLQVLASQG Trigger: GCCTTGAGAGGCTAAAACTTGCAGTGAATAGCACAAAGAGAGTGTCCTGTGGATACAACACCTGCTATGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162350.3 |
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| CDS GCA 72 bp | ATGAATTTGAAATGGGAGGTGTCCAGGAGTCTTCCTTaGATGTATACCTTGATGGTCCAGCAACAACAAAGC | + |
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Preference number: 6 (lower is better) Translates to: MNLKWEVSRSLP*MYTLMVQQQQS Trigger: GCTTTGTTGTTGCTGGACCATCAAGGTATACATGCAAGGAAGACTCCTGGACACCTCCCATTTCAAATTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CCA 72 bp | CACTGCACATGGGATGTTTCTGACCAAGTCTGTAATTaGGGCAAGCTTATAATCAACTACAGCAGGGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: HCTWDVSDQVCN*GKLIINYSRVF Trigger: GAAAACCCTGCTGTAGTTGATTATAAGCTTGCCCCAATTACAGACTTGGTCAGAAACATCCCATGTGCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CAA 72 bp | GCTGAAACACGGTATGGATTACTGGCTCGACTGGTCTaGACAAGTTTACATATTCCTCCAGTGAAAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: AETRYGLLARLV*TSLHIPPVKEL Trigger: CAACTCTTTCACTGGAGGAATATGTAAACTTGTCAAGACCAGTCGAGCCAGTAATCCATACCGTGTTTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022788.15 ENSMUST00000161997.8 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CAA 90 bp | TCCAGATTGGCTGAAACACGGTATGGATTACTGGCTCGACTGGTCTaGACAAGTTTACATATTCCTCCAGTGAAAGAGTTGTCAAGAACT | + |
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Preference number: 6 (lower is better) Translates to: SRLAETRYGLLARLV*TSLHIPPVKELSRT Trigger: AGTTCTTGACAACTCTTTCACTGGAGGAATATGTAAACTTGTCAAGACCAGTCGAGCCAGTAATCCATACCGTGTTTCAGCCAATCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022788.15 ENSMUST00000161997.8 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS GCA 72 bp | ATGGGACATGTCTGCAAGTTGCACTCTCTGGTCTCCTaGTTGATACAAAGCTTATCGCATAAGTTTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: MGHVCKLHSLVS*LIQSLSHKFFQ Trigger: TTGGAAAAACTTATGCGATAAGCTTTGTATCAAGCAGGAGACCAGAGAGTGCAACTTGCAGACATGTCCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022788.15 ENSMUST00000161997.8 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CCA 72 bp | CCAGCCAAAAATTTGCAAGCGGATGAAGTGAAATACTaGCTGGATCCCCCATCAAATATACAGAGATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PAKNLQADEVKY*LDPPSNIQRSS Trigger: AGAAGATCTCTGTATATTTGATGGGGGATCCAGCCAGTATTTCACTTCATCCGCTTGCAAATTTTTGGCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162350.3 |
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| CDS CAA 72 bp | AATGAATTTGAAATGGGAGGTGTCCAGGAGTCTTCCTaGCATGTATACCTTGATGGTCCAGCAACAACAAAG | + |
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Preference number: 6 (lower is better) Translates to: NEFEMGGVQESS*HVYLDGPATTK Trigger: CTTTGTTGTTGCTGGACCATCAAGGTATACATGCAAGGAAGACTCCTGGACACCTCCCATTTCAAATTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS TCA 72 bp | GACATGTCTGCAAGTTGCACTCTCTGGTCTCCTGCTTaGTACAAAGCTTATCGCATAAGTTTTTCCAATAGT | + |
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Preference number: 6 (lower is better) Translates to: DMSASCTLWSPA*YKAYRISFSNS Trigger: ACTATTGGAAAAACTTATGCGATAAGCTTTGTATCAAGCAGGAGACCAGAGAGTGCAACTTGCAGACATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022788.15 ENSMUST00000161997.8 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS TCA 72 bp | CAGCGTACAGATGTTTACTGTTTTCTCACGCATCGATaGCCCTATCTTTACACAGTAGAGTTGGTTTTCATC | + |
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Preference number: 6 (lower is better) Translates to: QRTDVYCFLTHR*PYLYTVELVFI Trigger: GATGAAAACCAACTCTACTGTGTAAAGATAGGGTCATCGATGCGTGAGAAAACAGTAAACATCTGTACGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162350.3 |
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| CDS CAA 90 bp | AAGTCATCTTCTATAGTTTGTACCTCAAAGTTGACATTTTCCAGATaGGCTGAAACACGGTATGGATTACTGGCTCGACTGGTCTTGACA | + |
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Preference number: 6 (lower is better) Translates to: KSSSIVCTSKLTFSR*AETRYGLLARLVLT Trigger: TGTCAAGACCAGTCGAGCCAGTAATCCATACCGTGTTTCAGCCAATCTGGAAAATGTCAACTTTGAGGTACAAACTATAGAAGATGACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022788.15 ENSMUST00000161997.8 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS CAA 90 bp | GCTTCTGGCTCAGCAAGGTCTACTTCTTTCATTTCTTCATCATCATaGATACATGGTTGTCCAACATTTTCCATTATTGAGACTGTACAG | + |
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Preference number: 6 (lower is better) Translates to: ASGSARSTSFISSSS*IHGCPTFSIIETVQ Trigger: CTGTACAGTCTCAATAATGGAAAATGTTGGACAACCATGTATCAATGATGATGAAGAAATGAAAGAAGTAGACCTTGCTGAGCCAGAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS TCA 72 bp | ATCATTGATACATGGTTGTCCAACATTTTCCATTATTaGGACTGTACAGTCTTCTTCTTGCTGATCCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: IIDTWLSNIFHY*DCTVFFLLILA Trigger: GGCAAGGATCAGCAAGAAGAAGACTGTACAGTCTCAATAATGGAAAATGTTGGACAACCATGTATCAATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS GCA 72 bp | AGGAACCTCCATATTTTTCAGACAGCTTGTTTTTGGTaGACGTGTCTTCCTTGTGTATTTCCATATAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: RNLHIFQTACFW*TCLPCVFPYKE Trigger: TTCTTTATATGGAAATACACAAGGAAGACACGTGCACCAAAAACAAGCTGTCTGAAAAATATGGAGGTTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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| CDS TCA 72 bp | AACTTAAGTTTCTTTGTTTCATACTGGACACAGTTTTaGGCTTCTTCTTCTGTTAAACCTGAGTTCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: NLSFFVSYWTQF*ASSSVKPEFCS Trigger: GCTACAGAACTCAGGTTTAACAGAAGAAGAAGCTCAAAACTGTGTCCAGTATGAAACAAAGAAACTTAAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022788.15 ENSMUST00000162350.3 ENSMUST00000162585.8 |
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