Pregenerated sensors for C5AR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074361Ensembl transcript IDs: ENSMUST00000098792.10, ENSMUST00000171425.4, ENSMUST00000238893.2, ENSMUST00000238927.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGTGCCTGGCTCCACTCTATTTCTTGAGACAGGGGTTTGTTGATTaGGCTAGACCACTTGTCCAGAGAACCCCTTGGATCCACCTATTC | + |
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Preference number: 1 (lower is better) Translates to: PCLAPLYFLRQGFVD*ARPLVQRTPWIHLF Trigger: GAATAGGTGGATCCAAGGGGTTCTCTGGACAAGTGGTCTAGCCCAATCAACAAACCCCTGTCTCAAGAAATAGAGTGGAGCCAGGCACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR CCA 90 bp | AACACCAAAGTGTACTTTCAAAAAGAAATTTTTGCCAGGCAATGGTaGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGGCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: NTKVYFQKEIFARQW*RTPLIPTLGRQRQV Trigger: CACCTGCCTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAAATTTCTTTTTGAAAGTACACTTTGGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR CCA 90 bp | TACAACACCAAAGTGTACTTTCAAAAAGAAATTTTTGCCAGGCAATaGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: YNTKVYFQKEIFARQ*WRTPLIPTLGRQRQ Trigger: CTGCCTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAAATTTCTTTTTGAAAGTACACTTTGGTGTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR CCA 90 bp | AGCAACACAAACAGGCCCACTGAGCAGTTGAAAACAATCAGAGTGTaGACAGAGGAAATGCAGTACTTTCTAAGACAGAGGAGGGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: SNTNRPTEQLKTIRV*TEEMQYFLRQRRGE Trigger: TTCTCCCCTCCTCTGTCTTAGAAAGTACTGCATTTCCTCTGTCCACACTCTGATTGTTTTCAACTGCTCAGTGGGCCTGTTTGTGTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR GCA 90 bp | TCTCCTTTCATACAACACCAAAGTGTACTTTCAAAAAGAAATTTTTaGCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAG | + |
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Preference number: 1 (lower is better) Translates to: SPFIQHQSVLSKRNF*QAMVAHAFNPNARE Trigger: CTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAAATTTCTTTTTGAAAGTACACTTTGGTGTTGTATGAAAGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR TCA 90 bp | GACCTTTATATCAGGGTTTTGAACGAGCAAGTGCACAATGAATATTaGATGAAGAACAAAAGCCATCTCCGAGCTCCTGCATCCAGCTAT | + |
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Preference number: 1 (lower is better) Translates to: DLYIRVLNEQVHNEY*MKNKSHLRAPASSY Trigger: ATAGCTGGATGCAGGAGCTCGGAGATGGCTTTTGTTCTTCATTCAATATTCATTGTGCACTTGCTCGTTCAAAACCCTGATATAAAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTGCCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGGGCCCTAGGGATCTGTaGGGGAGAGTTGGCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: FCQAMVAHAFNPNAREAEGPRDL*GRVGWT Trigger: TGTCCAGCCAACTCTCCCCCACAGATCCCTAGGGCC...CTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTGCCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGTCCTGGGGAAGGAATTaGCTCCAGCCACTGTCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: FCQAMVAHAFNPNAREAESWGRN*LQPLSA Trigger: GGCTGACAGTGGCTGGAGCCAATTCCTTCCCCAGGA...CTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTGCCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGGCATCCAGCTATGCTTaGAGCTGCACAGTTGTGCGA | + |
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Preference number: 2 (lower is better) Translates to: FCQAMVAHAFNPNAREAEASSYA*SCTVVR Trigger: TCGCACAACTGTGCAGCTTCAAGCATAGCTGGATGC...CTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTGCCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGTCTGTGGGGGAGAGTTaGCTGGACACAGTATGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: FCQAMVAHAFNPNAREAESVGES*LDTVCH Trigger: ATGGCATACTGTGTCCAGCCAACTCTCCCCCACAGA...CTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTGCCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGTCAGGGAAGGCTTCTTaGAAGAGATACCCCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: FCQAMVAHAFNPNAREAESGKAS*KRYPRA Trigger: TGCTCTGGGGTATCTCTTCCAAGAAGCCTTCCCTGA...CTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR TCA 90 bp | CACTATGTAGATCAGGCTAGCCTGGCTCGACCTCCCAAATCTCCATCTGGACCTCCATACACAGCTCTGTaGAGGTGGTGGGGCTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: HYVDQASLARPPKSPSGPPYTAL*RWWGSN Trigger: GTTTGAGCCCCACCACCTTCACAGAGCTGTGTATGG...AGGTCCAGATGGAGATTTGGGAGGTCGAGCCAGGCTAGCCTGATCTACATAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGATTGGGCTAGACCACTTGTCCAGAGAACCCCTTGGATCCACCTATTCCCTTCCTGGGGAAGGAATTaGCTCCAGCCACTGTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: VDWARPLVQRTPWIHLFPSWGRN*LQPLSA Trigger: GGCTGACAGTGGCTGGAGCCAATTCCTTCCCCAGGA...AGGGAATAGGTGGATCCAAGGGGTTCTCTGGACAAGTGGTCTAGCCCAATCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | CAATTGATAGAGCATGTGCCTAGCATGCATGAAGCCCTGAGGTTGATCACCAGCGGCCCTAGGGATCTGTaGGGGAGAGTTGGCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: QLIEHVPSMHEALRLITSGPRDL*GRVGWT Trigger: TGTCCAGCCAACTCTCCCCCACAGATCCCTAGGGCC...GCTGGTGATCAACCTCAGGGCTTCATGCATGCTAGGCACATGCTCTATCAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | GGATGCTCAGGTCCATTAGTCAGGTTTTGGCTCAGTCATTACCCGTTGTTCAGGTCCTGGGGAAGGAATTaGCTCCAGCCACTGTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: GCSGPLVRFWLSHYPLFRSWGRN*LQPLSA Trigger: GGCTGACAGTGGCTGGAGCCAATTCCTTCCCCAGGA...CCTGAACAACGGGTAATGACTGAGCCAAAACCTGACTAATGGACCTGAGCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGCTCAAACTCAGGTCCTaGTTTGTACAGCAGGCACTC | + |
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Preference number: 2 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKLKLRS*FVQQAL Trigger: GAGTGCCTGCTGTACAAACCAGGACCTGAGTTTGAG...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGAAGAACCCTTGTTTCTaGGAGGGATGCAAGTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKKNPCF*EGCKSG Trigger: CCCTGACTTGCATCCCTCCCAGAAACAAGGGTTCTT...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR TCA 90 bp | CCGTGCCTGGCTCCACTCTATTTCTTGAGACAGGGGTTTGTTGATTGGGCTAGAGCATCCAGCTATGCTTaGAGCTGCACAGTTGTGCGA | + |
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Preference number: 2 (lower is better) Translates to: PCLAPLYFLRQGFVDWARASSYA*SCTVVR Trigger: TCGCACAACTGTGCAGCTTCAAGCATAGCTGGATGC...TCTAGCCCAATCAACAAACCCCTGTCTCAAGAAATAGAGTGGAGCCAGGCACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR TCA 90 bp | GGATGCTCAGGTCCATTAGTCAGGTTTTGGCTCAGTCATTACCCGTTGTTCAGGCCATACACAGCTCTGTaGAGGTGGTGGGGCTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: GCSGPLVRFWLSHYPLFRPYTAL*RWWGSN Trigger: GTTTGAGCCCCACCACCTTCACAGAGCTGTGTATGG...CCTGAACAACGGGTAATGACTGAGCCAAAACCTGACTAATGGACCTGAGCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR TCA 90 bp | CAATTGATAGAGCATGTGCCTAGCATGCATGAAGCCCTGAGGTTGATCACCAGCCCATACACAGCTCTGTaGAGGTGGTGGGGCTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: QLIEHVPSMHEALRLITSPYTAL*RWWGSN Trigger: GTTTGAGCCCCACCACCTTCACAGAGCTGTGTATGG...GCTGGTGATCAACCTCAGGGCTTCATGCATGCTAGGCACATGCTCTATCAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTGCCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGTCTGGGCATTTGTGTTaGAGAGATTGCAAGATAGGA | + |
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Preference number: 2 (lower is better) Translates to: FCQAMVAHAFNPNAREAESGHLC*RDCKIG Trigger: TCCTATCTTGCAATCTCTTCAACACAAATGCCCAGA...CTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR TCA 90 bp | CAATTGATAGAGCATGTGCCTAGCATGCATGAAGCCCTGAGGTTGATCACCAGCGCTTACAACCAAGCCTaGCACCCTGAGTTCGATCCC | + |
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Preference number: 2 (lower is better) Translates to: QLIEHVPSMHEALRLITSAYNQA*HPEFDP Trigger: GGGATCGAACTCAGGGTGTCAGGCTTGGTTGTAAGC...GCTGGTGATCAACCTCAGGGCTTCATGCATGCTAGGCACATGCTCTATCAATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | CACTATGTAGATCAGGCTAGCCTGGCTCGACCTCCCAAATCTCCATCTGGACCTCTCAAACTCAGGTCCTaGTTTGTACAGCAGGCACTC | + |
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Preference number: 2 (lower is better) Translates to: HYVDQASLARPPKSPSGPLKLRS*FVQQAL Trigger: GAGTGCCTGCTGTACAAACCAGGACCTGAGTTTGAG...AGGTCCAGATGGAGATTTGGGAGGTCGAGCCAGGCTAGCCTGATCTACATAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATACCCCAGAGCAAGGCCTTTGTGTTTGCTCTGTCTGCTTGGAATAGTTCCGCATCCAGCTATGCTTaGAGCTGCACAGTTGTGCGA | + |
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Preference number: 2 (lower is better) Translates to: EIPQSKAFVFALSAWNSSASSYA*SCTVVR Trigger: TCGCACAACTGTGCAGCTTCAAGCATAGCTGGATGC...GGAACTATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGCTCTGGGGTATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGTCCCAAATCTCCATCTaGACCTCACTACGTAGATCA | + |
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Preference number: 2 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKSQISI*TSLRRS Trigger: TGATCTACGTAGTGAGGTCCAGATGGAGATTTGGGA...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | CAATTGATAGAGCATGTGCCTAGCATGCATGAAGCCCTGAGGTTGATCACCAGCTCTGTGGGGGAGAGTTaGCTGGACACAGTATGCCAT | + |
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Preference number: 2 (lower is better) Translates to: QLIEHVPSMHEALRLITSSVGES*LDTVCH Trigger: ATGGCATACTGTGTCCAGCCAACTCTCCCCCACAGA...GCTGGTGATCAACCTCAGGGCTTCATGCATGCTAGGCACATGCTCTATCAATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGTCTGGGCATTTGTGTTaGAGAGATTGCAAGATAGGA | + |
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Preference number: 2 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKSGHLC*RDCKIG Trigger: TCCTATCTTGCAATCTCTTCAACACAAATGCCCAGA...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | GGATGCTCAGGTCCATTAGTCAGGTTTTGGCTCAGTCATTACCCGTTGTTCAGGCCCCAGCACCCTCTTTaGGTTCTATGGAACATCTCA | + |
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Preference number: 2 (lower is better) Translates to: GCSGPLVRFWLSHYPLFRPQHPL*VLWNIS Trigger: TGAGATGTTCCATAGAACCCAAAGAGGGTGCTGGGG...CCTGAACAACGGGTAATGACTGAGCCAAAACCTGACTAATGGACCTGAGCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | GAGATACCCCAGAGCAAGGCCTTTGTGTTTGCTCTGTCTGCTTGGAATAGTTCCCCCCAGCACCCTCTTTaGGTTCTATGGAACATCTCA | + |
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Preference number: 2 (lower is better) Translates to: EIPQSKAFVFALSAWNSSPQHPL*VLWNIS Trigger: TGAGATGTTCCATAGAACCCAAAGAGGGTGCTGGGG...GGAACTATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGCTCTGGGGTATCTC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | GGATGCTCAGGTCCATTAGTCAGGTTTTGGCTCAGTCATTACCCGTTGTTCAGGCTCAAACTCAGGTCCTaGTTTGTACAGCAGGCACTC | + |
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Preference number: 2 (lower is better) Translates to: GCSGPLVRFWLSHYPLFRLKLRS*FVQQAL Trigger: GAGTGCCTGCTGTACAAACCAGGACCTGAGTTTGAG...CCTGAACAACGGGTAATGACTGAGCCAAAACCTGACTAATGGACCTGAGCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | CTTACAACCAAGCCTGACACCCTGAGTTCGATCCCAAGGACCCATATGATGGAATCAGGGAAGGCTTCTTaGAAGAGATACCCCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: LTTKPDTLSSIPRTHMMESGKAS*KRYPRA Trigger: TGCTCTGGGGTATCTCTTCCAAGAAGCCTTCCCTGA...TTCCATCATATGGGTCCTTGGGATCGAACTCAGGGTGTCAGGCTTGGTTGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | CAATTGATAGAGCATGTGCCTAGCATGCATGAAGCCCTGAGGTTGATCACCAGCAAGAACCCTTGTTTCTaGGAGGGATGCAAGTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: QLIEHVPSMHEALRLITSKNPCF*EGCKSG Trigger: CCCTGACTTGCATCCCTCCCAGAAACAAGGGTTCTT...GCTGGTGATCAACCTCAGGGCTTCATGCATGCTAGGCACATGCTCTATCAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR GCA 90 bp | GAGATACCCCAGAGCAAGGCCTTTGTGTTTGCTCTGTCTGCTTGGAATAGTTCCCTGGATGTCTTCATCTaGTACTCTCCACCTGGATCT | + |
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Preference number: 2 (lower is better) Translates to: EIPQSKAFVFALSAWNSSLDVFI*YSPPGS Trigger: AGATCCAGGTGGAGAGTAGCAGATGAAGACATCCAG...GGAACTATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGCTCTGGGGTATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | GGATGCTCAGGTCCATTAGTCAGGTTTTGGCTCAGTCATTACCCGTTGTTCAGGTCCCAAATCTCCATCTaGACCTCACTACGTAGATCA | + |
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Preference number: 2 (lower is better) Translates to: GCSGPLVRFWLSHYPLFRSQISI*TSLRRS Trigger: TGATCTACGTAGTGAGGTCCAGATGGAGATTTGGGA...CCTGAACAACGGGTAATGACTGAGCCAAAACCTGACTAATGGACCTGAGCATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR CCA 90 bp | CAATTGATAGAGCATGTGCCTAGCATGCATGAAGCCCTGAGGTTGATCACCAGCTCCCAAATCTCCATCTaGACCTCACTACGTAGATCA | + |
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Preference number: 2 (lower is better) Translates to: QLIEHVPSMHEALRLITSSQISI*TSLRRS Trigger: TGATCTACGTAGTGAGGTCCAGATGGAGATTTGGGA...GCTGGTGATCAACCTCAGGGCTTCATGCATGCTAGGCACATGCTCTATCAATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR TCA 90 bp | CTTACAACCAAGCCTGACACCCTGAGTTCGATCCCAAGGACCCATATGATGGAATCTGGGCATTTGTGTTaGAGAGATTGCAAGATAGGA | + |
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Preference number: 2 (lower is better) Translates to: LTTKPDTLSSIPRTHMMESGHLC*RDCKIG Trigger: TCCTATCTTGCAATCTCTTCAACACAAATGCCCAGA...TTCCATCATATGGGTCCTTGGGATCGAACTCAGGGTGTCAGGCTTGGTTGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR GCA 90 bp | GAGATACCCCAGAGCAAGGCCTTTGTGTTTGCTCTGTCTGCTTGGAATAGTTCCAGATTTAAGCATGGATaGTCAGGTCCATTAGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: EIPQSKAFVFALSAWNSSRFKHG*SGPLVR Trigger: CCTGACTAATGGACCTGAGCATCCATGCTTAAATCT...GGAACTATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGCTCTGGGGTATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR CAA 90 bp | CCTCTCTCACTCTTAGGGGACTTAGGATTTATCTGGGCATTTGTGTaGAAGAGATTGCAAGATAGGAAGAACCCTTGTTTCTGGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PLSLLGDLGFIWAFV*KRLQDRKNPCFWEG Trigger: TCCCTCCCAGAAACAAGGGTTCTTCCTATCTTGCAATCTCTTCAACACAAATGCCCAGATAAATCCTAAGTCCCCTAAGAGTGAGAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| 3UTR-3UTR TCA 90 bp | TTGATTGGGCTAGACCACTTGTCCAGAGAACCCCTTGGATCCACCTATTCCCTCCGAGCAAGTGCACAATaGATATTGAATGAAGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: LIGLDHLSREPLGSTYSLRASAQ*ILNEEQ Trigger: TTGTTCTTCATTCAATATTCATTGTGCACTTGCTCG...GAGGGAATAGGTGGATCCAAGGGGTTCTCTGGACAAGTGGTCTAGCCCAATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR CAA 90 bp | CTCTTAGGGGACTTAGGATTTATCTGGGCATTTGTGTTGAAGAGATaGCAAGATAGGAAGAACCCTTGTTTCTGGGAGGGATGCAAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LLGDLGFIWAFVLKR*QDRKNPCFWEGCKS Trigger: TGACTTGCATCCCTCCCAGAAACAAGGGTTCTTCCTATCTTGCAATCTCTTCAACACAAATGCCCAGATAAATCCTAAGTCCCCTAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGATACCCCAGAGCAAGGCCTTTGTGTTTGCTCTGTCTGCTTGGAATAGTTCCCGAGCAAGTGCACAATaGATATTGAATGAAGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: EIPQSKAFVFALSAWNSSRASAQ*ILNEEQ Trigger: TTGTTCTTCATTCAATATTCATTGTGCACTTGCTCG...GGAACTATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGCTCTGGGGTATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGCCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGAACTCAGGTCCTGGTTaGTACAGCAGGCACTCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: FCQAMVAHAFNPNAREAENSGPG*YSRHSS Trigger: GCTCGAGTGCCTGCTGTACAAACCAGGACCTGAGTT...CTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGCCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGTGCATCCAGCTATGCTaGAAGCTGCACAGTTGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: FCQAMVAHAFNPNAREAECIQLC*KLHSCA Trigger: CGCACAACTGTGCAGCTTCAAGCATAGCTGGATGCA...CTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGCCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGTGTCCAGAGAACCCCTaGGATCCACCTATTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: FCQAMVAHAFNPNAREAECPENP*DPPIPS Trigger: TGAGGGAATAGGTGGATCCAAGGGGTTCTCTGGACA...CTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR TCA 72 bp | ATCCCAACGCTCGGGAGGCAGAGGCAGGTGGATTTCTaGGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: IPTLGRQRQVDF*VRGQPGLQSEF Trigger: GAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGCGTTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGGTCAGGGAAGGCTTCTaGGAAGAGATACCCCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKVREGF*EEIPQS Trigger: GCTCTGGGGTATCTCTTCCAAGAAGCCTTCCCTGAC...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR CCA 72 bp | AGAAAACCAAGACCAAAGCCAGGCCCTAGGGATCTGTaGGGGAGAGTTGGCTGGACACAGTATGCCATAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RKPRPKPGPRDL*GRVGWTQYAIG Trigger: GCCTATGGCATACTGTGTCCAGCCAACTCTCCCCCACAGATCCCTAGGGCCTGGCTTTGGTCTTGGTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGATACCCCAGAGCAAGGCCTTTGTGTTTGCTCTGTCTGCTTGGAATAGTTCCCTCCTGGGGAAGGAATaGGCTCCAGCCACTGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: EIPQSKAFVFALSAWNSSLLGKE*APATVS Trigger: GCTGACAGTGGCTGGAGCCAATTCCTTCCCCAGGAG...GGAACTATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGCTCTGGGGTATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTATGTAGATCAGGCTAGCCTGGCTCGACCTCCCAAATCTCCATCTGGACCTAACTCAGGTCCTGGTTaGTACAGCAGGCACTCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: HYVDQASLARPPKSPSGPNSGPG*YSRHSS Trigger: GCTCGAGTGCCTGCTGTACAAACCAGGACCTGAGTT...AGGTCCAGATGGAGATTTGGGAGGTCGAGCCAGGCTAGCCTGATCTACATAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGCCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGGCAAGGCCTTTGTGTTaGCTCTGTCTGCTTGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: FCQAMVAHAFNPNAREAEARPLC*LCLLGI Trigger: TATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGC...CTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGCCCAGAGCAAGGCCTTaGTGTTTGCTCTGTCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKPRARP*CLLCLL Trigger: AAGCAGACAGAGCAAACACAAAGGCCTTGCTCTGGG...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR TCA 72 bp | GGGAGAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTaGGATGGCTCCGCCAGTAAAGGTGCTTACAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: GRKRQDGGVWGW*DGSASKGAYNQ Trigger: TTGGTTGTAAGCACCTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR CCA 72 bp | AAGCCAGGCCCTAGGGATCTGTGGGGGAGAGTTGGCTaGACACAGTATGCCATAGGCGTTAAAGTTCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: KPGPRDLWGRVG*TQYAIGVKVLQ Trigger: TTGCAGAACTTTAACGCCTATGGCATACTGTGTCCAGCCAACTCTCCCCCACAGATCCCTAGGGCCTGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR TCA 72 bp | AAAAGCCATCTCCGAGCTCCTGCATCCAGCTATGCTTaGAGCTGCACAGTTGTGCGATGGCCTAGGAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: KSHLRAPASSYA*SCTVVRWPRKS Trigger: GGATTTCCTAGGCCATCGCACAACTGTGCAGCTTCAAGCATAGCTGGATGCAGGAGCTCGGAGATGGCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR TCA 72 bp | GATGGCTCCGCCAGTAAAGGTGCTTACAACCAAGCCTaGCACCCTGAGTTCGATCCCAAGGACCCATATGAT | + |
|
Preference number: 3 (lower is better) Translates to: DGSASKGAYNQA*HPEFDPKDPYD Trigger: ATCATATGGGTCCTTGGGATCGAACTCAGGGTGTCAGGCTTGGTTGTAAGCACCTTTACTGGCGGAGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTGATTGGGCTAGACCACTTGTCCAGAGAACCCCTTGGATCCACCTATTCCCTTGCATCCAGCTATGCTaGAAGCTGCACAGTTGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: VDWARPLVQRTPWIHLFPCIQLC*KLHSCA Trigger: CGCACAACTGTGCAGCTTCAAGCATAGCTGGATGCA...AGGGAATAGGTGGATCCAAGGGGTTCTCTGGACAAGTGGTCTAGCCCAATCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATGCTCAGGTCCATTAGTCAGGTTTTGGCTCAGTCATTACCCGTTGTTCAGGAACTCAGGTCCTGGTTaGTACAGCAGGCACTCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GCSGPLVRFWLSHYPLFRNSGPG*YSRHSS Trigger: GCTCGAGTGCCTGCTGTACAAACCAGGACCTGAGTT...CCTGAACAACGGGTAATGACTGAGCCAAAACCTGACTAATGGACCTGAGCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGATACCCCAGAGCAAGGCCTTTGTGTTTGCTCTGTCTGCTTGGAATAGTTCCAACTCAGGTCCTGGTTaGTACAGCAGGCACTCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: EIPQSKAFVFALSAWNSSNSGPG*YSRHSS Trigger: GCTCGAGTGCCTGCTGTACAAACCAGGACCTGAGTT...GGAACTATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGCTCTGGGGTATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | CCGTGCCTGGCTCCACTCTATTTCTTGAGACAGGGGTTTGTTGATTGGGCTAGATGTCCAGAGAACCCCTaGGATCCACCTATTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PCLAPLYFLRQGFVDWARCPENP*DPPIPS Trigger: TGAGGGAATAGGTGGATCCAAGGGGTTCTCTGGACA...TCTAGCCCAATCAACAAACCCCTGTCTCAAGAAATAGAGTGGAGCCAGGCACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGGCAAGGCCTTTGTGTTaGCTCTGTCTGCTTGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKARPLC*LCLLGI Trigger: TATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGC...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGATACCCCAGAGCAAGGCCTTTGTGTTTGCTCTGTCTGCTTGGAATAGTTCCTGCATCCAGCTATGCTaGAAGCTGCACAGTTGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: EIPQSKAFVFALSAWNSSCIQLC*KLHSCA Trigger: CGCACAACTGTGCAGCTTCAAGCATAGCTGGATGCA...GGAACTATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGCTCTGGGGTATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTACAACCAAGCCTGACACCCTGAGTTCGATCCCAAGGACCCATATGATGGAATGCATCCAGCTATGCTaGAAGCTGCACAGTTGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: LTTKPDTLSSIPRTHMMECIQLC*KLHSCA Trigger: CGCACAACTGTGCAGCTTCAAGCATAGCTGGATGCA...TTCCATCATATGGGTCCTTGGGATCGAACTCAGGGTGTCAGGCTTGGTTGTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATGCTCAGGTCCATTAGTCAGGTTTTGGCTCAGTCATTACCCGTTGTTCAGGTGTCCAGAGAACCCCTaGGATCCACCTATTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GCSGPLVRFWLSHYPLFRCPENP*DPPIPS Trigger: TGAGGGAATAGGTGGATCCAAGGGGTTCTCTGGACA...CCTGAACAACGGGTAATGACTGAGCCAAAACCTGACTAATGGACCTGAGCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTATGTAGATCAGGCTAGCCTGGCTCGACCTCCCAAATCTCCATCTGGACCTGCTCCACTCTATTTCTaGAGACAGGGGTTTGTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: HYVDQASLARPPKSPSGPAPLYF*RQGFVD Trigger: ATCAACAAACCCCTGTCTCAAGAAATAGAGTGGAGC...AGGTCCAGATGGAGATTTGGGAGGTCGAGCCAGGCTAGCCTGATCTACATAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGATCTGGGCATTTGTGTaGAAGAGATTGCAAGATAGG | + |
|
Preference number: 3 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKIWAFV*KRLQDR Trigger: CCTATCTTGCAATCTCTTCAACACAAATGCCCAGAT...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | CAATTGATAGAGCATGTGCCTAGCATGCATGAAGCCCTGAGGTTGATCACCAGCAGGCCCACTGAGCAGTaGAAAACAATCAGAGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: QLIEHVPSMHEALRLITSRPTEQ*KTIRVW Trigger: CCACACTCTGATTGTTTTCAACTGCTCAGTGGGCCT...GCTGGTGATCAACCTCAGGGCTTCATGCATGCTAGGCACATGCTCTATCAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR TCA 72 bp | AGTTATCACCACCGTGCCTGGCTCCACTCTATTTCTTaGGACAGGGGTTTGTTGATTGGGCTAGACCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: SYHHRAWLHSIS*DRGLLIGLDHL Trigger: CAAGTGGTCTAGCCCAATCAACAAACCCCTGTCTCAAGAAATAGAGTGGAGCCAGGCACGGTGGTGATAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR CCA 72 bp | CCCCAGAGCAAGGCCTTTGTGTTTGCTCTGTCTGCTTaGAATAGTTCCCCAGATTTAAGCATGGATGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PQSKAFVFALSA*NSSPDLSMDAQ Trigger: CTGAGCATCCATGCTTAAATCTGGGGAACTATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGCTCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR CCA 72 bp | GTGTACTTTCAAAAAGAAATTTTTGCCAGGCAATGGTaGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VYFQKEIFARQW*RTPLIPTLGRQ Trigger: CTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAAATTTCTTTTTGAAAGTACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTACAACCAAGCCTGACACCCTGAGTTCGATCCCAAGGACCCATATGATGGAAGCAAGGCCTTTGTGTTaGCTCTGTCTGCTTGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: LTTKPDTLSSIPRTHMMEARPLC*LCLLGI Trigger: TATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGC...TTCCATCATATGGGTCCTTGGGATCGAACTCAGGGTGTCAGGCTTGGTTGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTACAACCAAGCCTGACACCCTGAGTTCGATCCCAAGGACCCATATGATGGAAGCTCCACTCTATTTCTaGAGACAGGGGTTTGTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LTTKPDTLSSIPRTHMMEAPLYF*RQGFVD Trigger: ATCAACAAACCCCTGTCTCAAGAAATAGAGTGGAGC...TTCCATCATATGGGTCCTTGGGATCGAACTCAGGGTGTCAGGCTTGGTTGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATGCTCAGGTCCATTAGTCAGGTTTTGGCTCAGTCATTACCCGTTGTTCAGGGCTCCACTCTATTTCTaGAGACAGGGGTTTGTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: GCSGPLVRFWLSHYPLFRAPLYF*RQGFVD Trigger: ATCAACAAACCCCTGTCTCAAGAAATAGAGTGGAGC...CCTGAACAACGGGTAATGACTGAGCCAAAACCTGACTAATGGACCTGAGCATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTACAACCAAGCCTGACACCCTGAGTTCGATCCCAAGGACCCATATGATGGAATCCATTAGTCAGGTTTaGGCTCAGTCATTACCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: LTTKPDTLSSIPRTHMMESISQV*AQSLPV Trigger: AACGGGTAATGACTGAGCCAAAACCTGACTAATGGA...TTCCATCATATGGGTCCTTGGGATCGAACTCAGGGTGTCAGGCTTGGTTGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR CCA 72 bp | AAAGTGTACTTTCAAAAAGAAATTTTTGCCAGGCAATaGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KVYFQKEIFARQ*WRTPLIPTLGR Trigger: CCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAAATTTCTTTTTGAAAGTACACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTACAACCAAGCCTGACACCCTGAGTTCGATCCCAAGGACCCATATGATGGAATTTGTGTTGAAGAGATaGCAAGATAGGAAGAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: LTTKPDTLSSIPRTHMMEFVLKR*QDRKNP Trigger: AGGGTTCTTCCTATCTTGCAATCTCTTCAACACAAA...TTCCATCATATGGGTCCTTGGGATCGAACTCAGGGTGTCAGGCTTGGTTGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR-3UTR CAA 90 bp | CAATTGATAGAGCATGTGCCTAGCATGCATGAAGCCCTGAGGTTGATCACCAGCTTTGTGTTGAAGAGATaGCAAGATAGGAAGAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: QLIEHVPSMHEALRLITSFVLKR*QDRKNP Trigger: AGGGTTCTTCCTATCTTGCAATCTCTTCAACACAAA...GCTGGTGATCAACCTCAGGGCTTCATGCATGCTAGGCACATGCTCTATCAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR GCA 72 bp | TGTGTGTCCCTAAGGTTAAGACTGGATGTCTTCATCTaGTACTCTCCACCTGGATCTCACTATGTAGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: CVSLRLRLDVFI*YSPPGSHYVDQ Trigger: CTGATCTACATAGTGAGATCCAGGTGGAGAGTAGCAGATGAAGACATCCAGTCTTAACCTTAGGGACACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR TCA 72 bp | ATCAGGGTTTTGAACGAGCAAGTGCACAATGAATATTaGATGAAGAACAAAAGCCATCTCCGAGCTCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: IRVLNEQVHNEY*MKNKSHLRAPA Trigger: TGCAGGAGCTCGGAGATGGCTTTTGTTCTTCATTCAATATTCATTGTGCACTTGCTCGTTCAAAACCCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR CCA 72 bp | GTTCCTCTCTCACTCTTAGGGGACTTAGGATTTATCTaGGCATTTGTGTTGAAGAGATTGCAAGATAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VPLSLLGDLGFI*AFVLKRLQDRK Trigger: CTTCCTATCTTGCAATCTCTTCAACACAAATGCCCAGATAAATCCTAAGTCCCCTAAGAGTGAGAGAGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR GCA 90 bp | TTTTGCCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGACGCCACCAGGGTGTTaGCTGGCACACCCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FCQAMVAHAFNPNAREAETPPGC*LAHPPG Trigger: TCCTGGTGGGTGTGCCAGGCAACACCCTGGTGGCGT...CTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGCCACCACGACAGCTGTaGCCAGGGGCCAATGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKPPRQL*PGANGG Trigger: GCCGCCATTGGCCCCTGGGCACAGCTGTCGTGGTGG...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR GCA 90 bp | TTTTGCCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGGCGAGGAGCAAGGAGTaGGGAGGAGCCGCTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: FCQAMVAHAFNPNAREAEARSKE*GGAAAM Trigger: CATTGCAGCGGCTCCTCCGCACTCCTTGCTCCTCGC...CTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGGGCCAGTGGCCCTTTTaGGCGATGGGCACAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKGQWPF*AMGTAR Trigger: CCTGGCTGTGCCCATCGCCCAAAAGGGCCACTGGCC...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR TCA 90 bp | TTTTGCCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGCCTTCCAGGAGGGCCTaGAAGCCAGTAGGAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FCQAMVAHAFNPNAREAEPSRRA*KPVGRG Trigger: ACCTCTTCCTACTGGCTTTCAGGCCCTCCTGGAAGG...CTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR TCA 90 bp | TTTTGCCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGGGATTGAGAGCACTGTaGGCCAGGGCCAGGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: FCQAMVAHAFNPNAREAEGLRAL*ARARPL Trigger: TAATGGCCTGGCCCTGGCTCACAGTGCTCTCAATCC...CTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGGCGAGGAGCAAGGAGTaGGGAGGAGCCGCTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKARSKE*GGAAAM Trigger: CATTGCAGCGGCTCCTCCGCACTCCTTGCTCCTCGC...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGTCCCTCAGGGCCCAGTaGCATGCAGCCTGGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKSLRAQ*HAAWSD Trigger: GTCACTCCAGGCTGCATGCCACTGGGCCCTGAGGGA...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR GCA 90 bp | GGATGCTCAGGTCCATTAGTCAGGTTTTGGCTCAGTCATTACCCGTTGTTCAGGCCACCACGACAGCTGTaGCCAGGGGCCAATGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GCSGPLVRFWLSHYPLFRPPRQL*PGANGG Trigger: GCCGCCATTGGCCCCTGGGCACAGCTGTCGTGGTGG...CCTGAACAACGGGTAATGACTGAGCCAAAACCTGACTAATGGACCTGAGCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR GCA 90 bp | GAGATACCCCAGAGCAAGGCCTTTGTGTTTGCTCTGTCTGCTTGGAATAGTTCCCCACCACGACAGCTGTaGCCAGGGGCCAATGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: EIPQSKAFVFALSAWNSSPPRQL*PGANGG Trigger: GCCGCCATTGGCCCCTGGGCACAGCTGTCGTGGTGG...GGAACTATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGCTCTGGGGTATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR CCA 90 bp | CACTATGTAGATCAGGCTAGCCTGGCTCGACCTCCCAAATCTCCATCTGGACCTTCCCTCAGGGCCCAGTaGCATGCAGCCTGGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HYVDQASLARPPKSPSGPSLRAQ*HAAWSD Trigger: GTCACTCCAGGCTGCATGCCACTGGGCCCTGAGGGA...AGGTCCAGATGGAGATTTGGGAGGTCGAGCCAGGCTAGCCTGATCTACATAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGCCTTCCAGGAGGGCCTaGAAGCCAGTAGGAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKPSRRA*KPVGRG Trigger: ACCTCTTCCTACTGGCTTTCAGGCCCTCCTGGAAGG...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR GCA 90 bp | CCGTGCCTGGCTCCACTCTATTTCTTGAGACAGGGGTTTGTTGATTGGGCTAGACCCCCAGACACCGGCTaGGCTGTTCTCTGCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PCLAPLYFLRQGFVDWARPPDTG*AVLCLS Trigger: TGAGAGGCAGAGAACAGCGCAGCCGGTGTCTGGGGG...TCTAGCCCAATCAACAAACCCCTGTCTCAAGAAATAGAGTGGAGCCAGGCACGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098792.10 |
||
| CDS-3UTR GCA 90 bp | GTTGATTGGGCTAGACCACTTGTCCAGAGAACCCCTTGGATCCACCTATTCCCTACGCCACCAGGGTGTTaGCTGGCACACCCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VDWARPLVQRTPWIHLFPTPPGC*LAHPPG Trigger: TCCTGGTGGGTGTGCCAGGCAACACCCTGGTGGCGT...AGGGAATAGGTGGATCCAAGGGGTTCTCTGGACAAGTGGTCTAGCCCAATCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR GCA 90 bp | TTGATTGGGCTAGACCACTTGTCCAGAGAACCCCTTGGATCCACCTATTCCCTCGCGAGGAGCAAGGAGTaGGGAGGAGCCGCTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LIGLDHLSREPLGSTYSLARSKE*GGAAAM Trigger: CATTGCAGCGGCTCCTCCGCACTCCTTGCTCCTCGC...GAGGGAATAGGTGGATCCAAGGGGTTCTCTGGACAAGTGGTCTAGCCCAATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR CCA 90 bp | CTTACAACCAAGCCTGACACCCTGAGTTCGATCCCAAGGACCCATATGATGGAAGGCCAGTGGCCCTTTTaGGCGATGGGCACAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTTKPDTLSSIPRTHMMEGQWPF*AMGTAR Trigger: CCTGGCTGTGCCCATCGCCCAAAAGGGCCACTGGCC...TTCCATCATATGGGTCCTTGGGATCGAACTCAGGGTGTCAGGCTTGGTTGTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR CCA 90 bp | GAGATACCCCAGAGCAAGGCCTTTGTGTTTGCTCTGTCTGCTTGGAATAGTTCCGGCCAGTGGCCCTTTTaGGCGATGGGCACAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EIPQSKAFVFALSAWNSSGQWPF*AMGTAR Trigger: CCTGGCTGTGCCCATCGCCCAAAAGGGCCACTGGCC...GGAACTATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGCTCTGGGGTATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR TCA 90 bp | CACTATGTAGATCAGGCTAGCCTGGCTCGACCTCCCAAATCTCCATCTGGACCTGGATTGAGAGCACTGTaGGCCAGGGCCAGGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: HYVDQASLARPPKSPSGPGLRAL*ARARPL Trigger: TAATGGCCTGGCCCTGGCTCACAGTGCTCTCAATCC...AGGTCCAGATGGAGATTTGGGAGGTCGAGCCAGGCTAGCCTGATCTACATAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR GCA 90 bp | CTTACAACCAAGCCTGACACCCTGAGTTCGATCCCAAGGACCCATATGATGGAAACGCCACCAGGGTGTTaGCTGGCACACCCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTTKPDTLSSIPRTHMMETPPGC*LAHPPG Trigger: TCCTGGTGGGTGTGCCAGGCAACACCCTGGTGGCGT...TTCCATCATATGGGTCCTTGGGATCGAACTCAGGGTGTCAGGCTTGGTTGTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR GCA 90 bp | GGATGCTCAGGTCCATTAGTCAGGTTTTGGCTCAGTCATTACCCGTTGTTCAGGGCGAGGAGCAAGGAGTaGGGAGGAGCCGCTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GCSGPLVRFWLSHYPLFRARSKE*GGAAAM Trigger: CATTGCAGCGGCTCCTCCGCACTCCTTGCTCCTCGC...CCTGAACAACGGGTAATGACTGAGCCAAAACCTGACTAATGGACCTGAGCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGGGCCATGAACACCAATaGCCCCAGGAAGCCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKGHEHQ*PQEAKE Trigger: CTCTTTGGCTTCCTGGGGCCATTGGTGTTCATGGCC...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR TCA 90 bp | GAGATACCCCAGAGCAAGGCCTTTGTGTTTGCTCTGTCTGCTTGGAATAGTTCCTGGCAACCTCGGCGCTaGCCGATCCCCCATAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: EIPQSKAFVFALSAWNSSWQPRR*PIPHSL Trigger: TAGACTATGGGGGATCGGTCAGCGCCGAGGTTGCCA...GGAACTATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGCTCTGGGGTATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR GCA 90 bp | TTTTGCCAGGCAATGGTGGCGCACGCCTTTAATCCCAACGCTCGGGAGGCAGAGCAGCCTGGAGTGACTTaGAGAGTTGTTTTCTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FCQAMVAHAFNPNAREAEQPGVT*RVVFFR Trigger: TCGGAAGAAAACAACTCTGCAAGTCACTCCAGGCTG...CTCTGCCTCCCGAGCGTTGGGATTAAAGGCGTGCGCCACCATTGCCTGGCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR CCA 90 bp | CACTATGTAGATCAGGCTAGCCTGGCTCGACCTCCCAAATCTCCATCTGGACCTGGCCATGAACACCAATaGCCCCAGGAAGCCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HYVDQASLARPPKSPSGPGHEHQ*PQEAKE Trigger: CTCTTTGGCTTCCTGGGGCCATTGGTGTTCATGGCC...AGGTCCAGATGGAGATTTGGGAGGTCGAGCCAGGCTAGCCTGATCTACATAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR TCA 90 bp | CAATTGATAGAGCATGTGCCTAGCATGCATGAAGCCCTGAGGTTGATCACCAGCCCTTCCAGGAGGGCCTaGAAGCCAGTAGGAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QLIEHVPSMHEALRLITSPSRRA*KPVGRG Trigger: ACCTCTTCCTACTGGCTTTCAGGCCCTCCTGGAAGG...GCTGGTGATCAACCTCAGGGCTTCATGCATGCTAGGCACATGCTCTATCAATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR TCA 90 bp | CTTACAACCAAGCCTGACACCCTGAGTTCGATCCCAAGGACCCATATGATGGAACCTTCCAGGAGGGCCTaGAAGCCAGTAGGAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTTKPDTLSSIPRTHMMEPSRRA*KPVGRG Trigger: ACCTCTTCCTACTGGCTTTCAGGCCCTCCTGGAAGG...TTCCATCATATGGGTCCTTGGGATCGAACTCAGGGTGTCAGGCTTGGTTGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR TCA 90 bp | CAATTGATAGAGCATGTGCCTAGCATGCATGAAGCCCTGAGGTTGATCACCAGCGGATTGAGAGCACTGTaGGCCAGGGCCAGGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: QLIEHVPSMHEALRLITSGLRAL*ARARPL Trigger: TAATGGCCTGGCCCTGGCTCACAGTGCTCTCAATCC...GCTGGTGATCAACCTCAGGGCTTCATGCATGCTAGGCACATGCTCTATCAATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGGCATGCAGCCTGGAGTaGCTTGCAGAGTTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKACSLE*LAELFS Trigger: AGAAAACAACTCTGCAAGTCACTCCAGGCTGCATGC...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR TCA 90 bp | TTGATTGGGCTAGACCACTTGTCCAGAGAACCCCTTGGATCCACCTATTCCCTCGCATGCAGCCTGGAGTaGCTTGCAGAGTTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIGLDHLSREPLGSTYSLACSLE*LAELFS Trigger: AGAAAACAACTCTGCAAGTCACTCCAGGCTGCATGC...GAGGGAATAGGTGGATCCAAGGGGTTCTCTGGACAAGTGGTCTAGCCCAATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR TCA 90 bp | GAGATACCCCAGAGCAAGGCCTTTGTGTTTGCTCTGTCTGCTTGGAATAGTTCCGCATGCAGCCTGGAGTaGCTTGCAGAGTTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EIPQSKAFVFALSAWNSSACSLE*LAELFS Trigger: AGAAAACAACTCTGCAAGTCACTCCAGGCTGCATGC...GGAACTATTCCAAGCAGACAGAGCAAACACAAAGGCCTTGCTCTGGGGTATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR TCA 90 bp | CAATTGATAGAGCATGTGCCTAGCATGCATGAAGCCCTGAGGTTGATCACCAGCGCATGCAGCCTGGAGTaGCTTGCAGAGTTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLIEHVPSMHEALRLITSACSLE*LAELFS Trigger: AGAAAACAACTCTGCAAGTCACTCCAGGCTGCATGC...GCTGGTGATCAACCTCAGGGCTTCATGCATGCTAGGCACATGCTCTATCAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR GCA 90 bp | GGATGCTCAGGTCCATTAGTCAGGTTTTGGCTCAGTCATTACCCGTTGTTCAGGAAATGTTCGATGATCTaGACCCTTCCAGGAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GCSGPLVRFWLSHYPLFRKCSMI*TLPGGP Trigger: AGGCCCTCCTGGAAGGGTGCAGATCATCGAACATTT...CCTGAACAACGGGTAATGACTGAGCCAAAACCTGACTAATGGACCTGAGCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR GCA 90 bp | CAATTGATAGAGCATGTGCCTAGCATGCATGAAGCCCTGAGGTTGATCACCAGCCAGCCTGGAGTGACTTaGAGAGTTGTTTTCTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QLIEHVPSMHEALRLITSQPGVT*RVVFFR Trigger: TCGGAAGAAAACAACTCTGCAAGTCACTCCAGGCTG...GCTGGTGATCAACCTCAGGGCTTCATGCATGCTAGGCACATGCTCTATCAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS-3UTR GCA 90 bp | GGATGCTCAGGTCCATTAGTCAGGTTTTGGCTCAGTCATTACCCGTTGTTCAGGCAGCCTGGAGTGACTTaGAGAGTTGTTTTCTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GCSGPLVRFWLSHYPLFRQPGVT*RVVFFR Trigger: TCGGAAGAAAACAACTCTGCAAGTCACTCCAGGCTG...CCTGAACAACGGGTAATGACTGAGCCAAAACCTGACTAATGGACCTGAGCATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR CAA 72 bp | TCAGACAGACAGATGTATACATTGTTCAAGGAGGGTTaGGGGTGGAGCTCAGTAACAGGACAGCTTCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SDRQMYTLFKEG*GWSSVTGQLPR Trigger: TCTAGGAAGCTGTCCTGTTACTGAGCTCCACCCCAAACCCTCCTTGAACAATGTATACATCTGTCTGTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR CAA 72 bp | GACTTAGGATTTATCTGGGCATTTGTGTTGAAGAGATaGCAAGATAGGAAGAACCCTTGTTTCTGGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLGFIWAFVLKR*QDRKNPCFWEG Trigger: TCCCTCCCAGAAACAAGGGTTCTTCCTATCTTGCAATCTCTTCAACACAAATGCCCAGATAAATCCTAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| 3UTR CAA 72 bp | CTCTTAGGGGACTTAGGATTTATCTGGGCATTTGTGTaGAAGAGATTGCAAGATAGGAAGAACCCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLGDLGFIWAFV*KRLQDRKNPCF Trigger: GAAACAAGGGTTCTTCCTATCTTGCAATCTCTTCAACACAAATGCCCAGATAAATCCTAAGTCCCCTAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS CCA 90 bp | GCCAGCAGCCTGCCGCCCCGTATGGCCAGTGGCCCTTTTGGGCGATaGGCACAGCCAGGAAGGGCAGAGACACACAACAAAGCAAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ASSLPPRMASGPFGR*AQPGRAETHNKASR Trigger: CCGACTTGCTTTGTTGTGTGTCTCTGCCCTTCCTGGCTGTGCCCATCGCCCAAAAGGGCCACTGGCCATACGGGGCGGCAGGCTGCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
||
| CDS CCA 90 bp | GTGATGGAGGACAACAGCCAGCAGCCTGCCGCCCCGTATGGCCAGTaGCCCTTTTGGGCGATGGGCACAGCCAGGAAGGGCAGAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: VMEDNSQQPAAPYGQ*PFWAMGTARKGRDT Trigger: TGTGTCTCTGCCCTTCCTGGCTGTGCCCATCGCCCAAAAGGGCCACTGGCCATACGGGGCGGCAGGCTGCTGGCTGTTGTCCTCCATCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS CCA 90 bp | GACAACAGCCAGCAGCCTGCCGCCCCGTATGGCCAGTGGCCCTTTTaGGCGATGGGCACAGCCAGGAAGGGCAGAGACACACAACAAAGC | + |
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Preference number: 5 (lower is better) Translates to: DNSQQPAAPYGQWPF*AMGTARKGRDTQQS Trigger: GCTTTGTTGTGTGTCTCTGCCCTTCCTGGCTGTGCCCATCGCCCAAAAGGGCCACTGGCCATACGGGGCGGCAGGCTGCTGGCTGTTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS TCA 90 bp | GGCGGCGGGCCATCTGCCGTTGGAGGATGCCGTGACAACCGGCCATaGACACCAATGGCCCCAGGAAGCCAAAGAGGAATCGAACAGTGG | + |
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Preference number: 5 (lower is better) Translates to: GGGPSAVGGCRDNRP*TPMAPGSQRGIEQW Trigger: CCACTGTTCGATTCCTCTTTGGCTTCCTGGGGCCATTGGTGTTCATGGCCGGTTGTCACGGCATCCTCCAACGGCAGATGGCCCGCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS GCA 90 bp | GGCATACATAGACAGAATGGTGATGGAGGACAACAGCCAGCAGCCTaGCGCCCCGTATGGCCAGTGGCCCTTTTGGGCGATGGGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: GIHRQNGDGGQQPAA*RPVWPVALLGDGHS Trigger: GCTGTGCCCATCGCCCAAAAGGGCCACTGGCCATACGGGGCGGCAGGCTGCTGGCTGTTGTCCTCCATCACCATTCTGTCTATGTATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS CCA 90 bp | GCACAGCCAGGAAGGGCAGAGACACACAACAAAGCAAGTCGGCCATaGTCAGGTGCAGGAACCAAGAGGCCCCAAGCCTGTGGCGGGACT | + |
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Preference number: 5 (lower is better) Translates to: AQPGRAETHNKASRP*SGAGTKRPQACGGT Trigger: AGTCCCGCCACAGGCTTGGGGCCTCTTGGTTCCTGCACCTGACCATGGCCGACTTGCTTTGTTGTGTGTCTCTGCCCTTCCTGGCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS-3UTR CAA 90 bp | GAAAGAGACAAGACGGAGGAGTTTGGGGCTGGTGAGATGGCTCCGCCAGTAAAGTGGCCAGTGGCCCTTTaGGGCGATGGGCACAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: ERDKTEEFGAGEMAPPVKWPVAL*GDGHSQ Trigger: CTGGCTGTGCCCATCGCCCAAAAGGGCCACTGGCCA...CTTTACTGGCGGAGCCATCTCACCAGCCCCAAACTCCTCCGTCTTGTCTCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS GCA 90 bp | AGGAAGGGCAGAGACACACAACAAAGCAAGTCGGCCATGGTCAGGTaGAGGAACCAAGAGGCCCCAAGCCTGTGGCGGGACTCTTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: RKGRDTQQSKSAMVR*RNQEAPSLWRDSFQ Trigger: CTGGAAAGAGTCCCGCCACAGGCTTGGGGCCTCTTGGTTCCTGCACCTGACCATGGCCGACTTGCTTTGTTGTGTGTCTCTGCCCTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS-3UTR CAA 90 bp | GTTGATTGGGCTAGACCACTTGTCCAGAGAACCCCTTGGATCCACCTATTCCCTTGGCCAGTGGCCCTTTaGGGCGATGGGCACAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: VDWARPLVQRTPWIHLFPWPVAL*GDGHSQ Trigger: CTGGCTGTGCCCATCGCCCAAAAGGGCCACTGGCCA...AGGGAATAGGTGGATCCAAGGGGTTCTCTGGACAAGTGGTCTAGCCCAATCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS-3UTR CAA 90 bp | CCGTGCCTGGCTCCACTCTATTTCTTGAGACAGGGGTTTGTTGATTGGGCTAGATGGCCAGTGGCCCTTTaGGGCGATGGGCACAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: PCLAPLYFLRQGFVDWARWPVAL*GDGHSQ Trigger: CTGGCTGTGCCCATCGCCCAAAAGGGCCACTGGCCA...TCTAGCCCAATCAACAAACCCCTGTCTCAAGAAATAGAGTGGAGCCAGGCACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS-3UTR CAA 90 bp | TTGATTGGGCTAGACCACTTGTCCAGAGAACCCCTTGGATCCACCTATTCCCTCTGGCCAGTGGCCCTTTaGGGCGATGGGCACAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LIGLDHLSREPLGSTYSLWPVAL*GDGHSQ Trigger: CTGGCTGTGCCCATCGCCCAAAAGGGCCACTGGCCA...GAGGGAATAGGTGGATCCAAGGGGTTCTCTGGACAAGTGGTCTAGCCCAATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS CCA 90 bp | CATCTGCCGTTGGAGGATGCCGTGACAACCGGCCATGAACACCAATaGCCCCAGGAAGCCAAAGAGGAATCGAACAGTGGTGATGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: HLPLEDAVTTGHEHQ*PQEAKEESNSGDGN Trigger: GTTGCCATCACCACTGTTCGATTCCTCTTTGGCTTCCTGGGGCCATTGGTGTTCATGGCCGGTTGTCACGGCATCCTCCAACGGCAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS CCA 90 bp | CCGGCATCTCAGACACCATTTCGTGGCTGGTGGATATGGATACCTTaGTCACCGCACTTTCCTCATCCTGTGGATCCCTCAGGGCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: PASQTPFRGWWIWIP*SPHFPHPVDPSGPS Trigger: ACTGGGCCCTGAGGGATCCACAGGATGAGGAAAGTGCGGTGACCAAGGTATCCATATCCACCAGCCACGAAATGGTGTCTGAGATGCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS CCA 90 bp | CACTGTAGTGTTCATGGTCATACTCATAGTCATAATACTCGCTGGTaGTGTGGTTCATCATTCTGGCCCCCAGACACCCGTCTCCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: HCSVHGHTHSHNTRW*CGSSFWPPDTRLPA Trigger: GGCTGGGAGACGGGTGTCTGGGGGCCAGAATGATGAACCACACCACCAGCGAGTATTATGACTATGAGTATGACCATGAACACTACAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238893.2 |
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| CDS-3UTR CAA 90 bp | CTTACAACCAAGCCTGACACCCTGAGTTCGATCCCAAGGACCCATATGATGGAAGCAGCCTGGAGTGACTaGCAGAGTTGTTTTCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: LTTKPDTLSSIPRTHMMEAAWSD*QSCFLP Trigger: CGGAAGAAAACAACTCTGCAAGTCACTCCAGGCTGC...TTCCATCATATGGGTCCTTGGGATCGAACTCAGGGTGTCAGGCTTGGTTGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS TCA 90 bp | TGTTTTCTTCCGAAATACAAAAACATTATGGGATTGAGAGCACTGTaGGCCAGGGCCAGGCCATTAAACAGAGGCTCCGCCTCCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: CFLPKYKNIMGLRAL*ARARPLNRGSASRT Trigger: GGTCCTGGAGGCGGAGCCTCTGTTTAATGGCCTGGCCCTGGCTCACAGTGCTCTCAATCCCATAATGTTTTTGTATTTCGGAAGAAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS CAA 72 bp | CCAGCAGCCTGCCGCCCCGTATGGCCAGTGGCCCTTTaGGGCGATGGGCACAGCCAGGAAGGGCAGAGACAC | + |
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Preference number: 6 (lower is better) Translates to: PAACRPVWPVAL*GDGHSQEGQRH Trigger: GTGTCTCTGCCCTTCCTGGCTGTGCCCATCGCCCAAAAGGGCCACTGGCCATACGGGGCGGCAGGCTGCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS CCA 72 bp | CAGCAGCCTGCCGCCCCGTATGGCCAGTGGCCCTTTTaGGCGATGGGCACAGCCAGGAAGGGCAGAGACACA | + |
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Preference number: 6 (lower is better) Translates to: QQPAAPYGQWPF*AMGTARKGRDT Trigger: TGTGTCTCTGCCCTTCCTGGCTGTGCCCATCGCCCAAAAGGGCCACTGGCCATACGGGGCGGCAGGCTGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS CCA 72 bp | GATGGAGGACAACAGCCAGCAGCCTGCCGCCCCGTATaGCCAGTGGCCCTTTTGGGCGATGGGCACAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: DGGQQPAACRPV*PVALLGDGHSQ Trigger: CTGGCTGTGCCCATCGCCCAAAAGGGCCACTGGCCATACGGGGCGGCAGGCTGCTGGCTGTTGTCCTCCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS GCA 72 bp | GACCCGGGCGAGGAGCAAGGAGTGCGGAGGAGCCGCTaGAATGATTACCCGCAGGACGTGATAAGGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: DPGEEQGVRRSR*NDYPQDVIRGP Trigger: TGGACCCCTTATCACGTCCTGCGGGTAATCATTGCAGCGGCTCCTCCGCACTCCTTGCTCCTCGCCCGGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS CAA 90 bp | GGACAACAGCCAGCAGCCTGCCGCCCCGTATGGCCAGTGGCCCTTTaGGGCGATGGGCACAGCCAGGAAGGGCAGAGACACACAACAAAG | + |
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Preference number: 6 (lower is better) Translates to: GQQPAACRPVWPVAL*GDGHSQEGQRHTTK Trigger: CTTTGTTGTGTGTCTCTGCCCTTCCTGGCTGTGCCCATCGCCCAAAAGGGCCACTGGCCATACGGGGCGGCAGGCTGCTGGCTGTTGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS TCA 72 bp | GGGCGAGGAGCAAGGAGTGCGGAGGAGCCGCTGCAATaGTTACCCGCAGGACGTGATAAGGGGTCCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: GRGARSAEEPLQ*LPAGRDKGSSK Trigger: TTTGCTGGACCCCTTATCACGTCCTGCGGGTAATCATTGCAGCGGCTCCTCCGCACTCCTTGCTCCTCGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS GCA 72 bp | AGACAGAATGGTGATGGAGGACAACAGCCAGCAGCCTaGCGCCCCGTATGGCCAGTGGCCCTTTTGGGCGAT | + |
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Preference number: 6 (lower is better) Translates to: RQNGDGGQQPAA*RPVWPVALLGD Trigger: ATCGCCCAAAAGGGCCACTGGCCATACGGGGCGGCAGGCTGCTGGCTGTTGTCCTCCATCACCATTCTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS TCA 72 bp | GAGGAGGCCTGGACCACACGCACCCCAAATGTTCGATaGTCTGCACCCTTCCAGGAGGGCCTGAAAGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: EEAWTTRTPNVR*SAPFQEGLKAS Trigger: ACTGGCTTTCAGGCCCTCCTGGAAGGGTGCAGATCATCGAACATTTGGGGTGCGTGTGGTCCAGGCCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS TCA 72 bp | CCATCTGCCGTTGGAGGATGCCGTGACAACCGGCCATaGACACCAATGGCCCCAGGAAGCCAAAGAGGAATC | + |
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Preference number: 6 (lower is better) Translates to: PSAVGGCRDNRP*TPMAPGSQRGI Trigger: GATTCCTCTTTGGCTTCCTGGGGCCATTGGTGTTCATGGCCGGTTGTCACGGCATCCTCCAACGGCAGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS CCA 72 bp | GGAAGGGCAGAGACACACAACAAAGCAAGTCGGCCATaGTCAGGTGCAGGAACCAAGAGGCCCCAAGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: GRAETHNKASRP*SGAGTKRPQAC Trigger: ACAGGCTTGGGGCCTCTTGGTTCCTGCACCTGACCATGGCCGACTTGCTTTGTTGTGTGTCTCTGCCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS CAA 90 bp | ACCGGCATCTCAGACACCATTTCGTGGCTGGTGGATATGGATACCTaGGTCACCGCACTTTCCTCATCCTGTGGATCCCTCAGGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: TGISDTISWLVDMDT*VTALSSSCGSLRAQ Trigger: CTGGGCCCTGAGGGATCCACAGGATGAGGAAAGTGCGGTGACCAAGGTATCCATATCCACCAGCCACGAAATGGTGTCTGAGATGCCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS CCA 72 bp | AGTCATAATACTCGCTGGTGGTGTGGTTCATCATTCTaGCCCCCAGACACCGGCTGCGCTGTTCTCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SHNTRWWCGSSF*PPDTGCAVLCL Trigger: GAGGCAGAGAACAGCGCAGCCGGTGTCTGGGGGCCAGAATGATGAACCACACCACCAGCGAGTATTATGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098792.10 |
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| CDS CCA 72 bp | TTGGAGGATGCCGTGACAACCGGCCATGAACACCAATaGCCCCAGGAAGCCAAAGAGGAATCGAACAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: LEDAVTTGHEHQ*PQEAKEESNSG Trigger: ACCACTGTTCGATTCCTCTTTGGCTTCCTGGGGCCATTGGTGTTCATGGCCGGTTGTCACGGCATCCTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS CCA 72 bp | CCGGCATCTCAGACACCATTTCGTGGCTGGTGGATATaGATACCTTGGTCACCGCACTTTCCTCATCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PASQTPFRGWWI*IPWSPHFPHPV Trigger: CACAGGATGAGGAAAGTGCGGTGACCAAGGTATCCATATCCACCAGCCACGAAATGGTGTCTGAGATGCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS CCA 72 bp | AGTCATAATACTCGCTGGTGGTGTGGTTCATCATTCTaGCCCCCAGACACCCGTCTCCCAGCCCCTCATATT | + |
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Preference number: 6 (lower is better) Translates to: SHNTRWWCGSSF*PPDTRLPAPHI Trigger: AATATGAGGGGCTGGGAGACGGGTGTCTGGGGGCCAGAATGATGAACCACACCACCAGCGAGTATTATGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238893.2 |
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| CDS CCA 72 bp | CAGACACCATTTCGTGGCTGGTGGATATGGATACCTTaGTCACCGCACTTTCCTCATCCTGTGGATCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: QTPFRGWWIWIP*SPHFPHPVDPS Trigger: TGAGGGATCCACAGGATGAGGAAAGTGCGGTGACCAAGGTATCCATATCCACCAGCCACGAAATGGTGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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| CDS CAA 72 bp | TCAGACACCATTTCGTGGCTGGTGGATATGGATACCTaGGTCACCGCACTTTCCTCATCCTGTGGATCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SDTISWLVDMDT*VTALSSSCGSL Trigger: GAGGGATCCACAGGATGAGGAAAGTGCGGTGACCAAGGTATCCATATCCACCAGCCACGAAATGGTGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098792.10 ENSMUST00000171425.4 ENSMUST00000238893.2 ENSMUST00000238927.2 |
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