Pregenerated sensors for C5AR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049130Ensembl transcript IDs: ENSMUST00000050770.6, ENSMUST00000168818.2, ENSMUST00000209442.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAAGTATGATGACCTGGGTTCGATTCCATGAGGACCTTCATGGTTaGAATGAGAGAACCAATTTCAACAGGTTGTCCTCTGACCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: PSMMTWVRFHEDLHG*NERTNFNRLSSDLH Trigger: GTGGAGGTCAGAGGACAACCTGTTGAAATTGGTTCTCTCATTGCAACCATGAAGGTCCTCATGGAATCGAACCCAGGTCATCATACTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCACATGCTGGGATATAGGTTTGCGCCACCACACCCAGGTCTTCTTTCACGGTCACAGGAGGATCTaGAGTTCAAGGCCAGACTAC | + |
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Preference number: 2 (lower is better) Translates to: PPTCWDIGLRHHTQVFFHGHRRI*SSRPDY Trigger: GTAGTCTGGCCTTGAACTCCAGATCCTCCTGTGACC...GTGAAAGAAGACCTGGGTGTGGTGGCGCAAACCTATATCCCAGCATGTGGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCACATGCTGGGATATAGGTTTGCGCCACCACACCCAGGTCTTCTTTCACTCCACACATATACCATaGCATTTGCCCAGCACCACC | + |
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Preference number: 2 (lower is better) Translates to: PPTCWDIGLRHHTQVFFHSTHIP*HLPSTT Trigger: GGTGGTGCTGGGCAAATGTCATGGTATATGTGTGGA...GTGAAAGAAGACCTGGGTGTGGTGGCGCAAACCTATATCCCAGCATGTGGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCACATGCTGGGATATAGGTTTGCGCCACCACACCCAGGTCTTCTTTCACATTGGGTGGATACTGGTTaGCTGGGGTTTGGGGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: SHMLGYRFAPPHPGLLSHWVDTG*LGFGAV Trigger: TACAGCCCCAAACCCCAGGCAACCAGTATCCACCCA...ATGTGAAAGAAGACCTGGGTGTGGTGGCGCAAACCTATATCCCAGCATGTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCACATGCTGGGATATAGGTTTGCGCCACCACACCCAGGTCTTCTTTCACATACGACACTTGGGAGATaGTCACAGGAGGATCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SHMLGYRFAPPHPGLLSHTTLGR*SQEDLE Trigger: CTCCAGATCCTCCTGTGACCATCTCCCAAGTGTCGT...ATGTGAAAGAAGACCTGGGTGTGGTGGCGCAAACCTATATCCCAGCATGTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCACATGCTGGGATATAGGTTTGCGCCACCACACCCAGGTCTTCTTTCACAAAAGAAATAAAGGGTaGGTGGATACTGGTTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: PPTCWDIGLRHHTQVFFHKRNKG*VDTGCL Trigger: CAGGCAACCAGTATCCACCCACCCTTTATTTCTTTT...GTGAAAGAAGACCTGGGTGTGGTGGCGCAAACCTATATCCCAGCATGTGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR-3UTR TCA 90 bp | CATGAGACAGTCTCCCTGGGTAAGCCAGGCTGGGTTCTAAAACTCAATTCTGGCTGTAGCTTGCTTATGTaGTATATCCATAAGCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HETVSLGKPGWVLKLNSGCSLLM*YIHKPW Trigger: CCAGGGCTTATGGATATATCACATAAGCAAGCTACA...GCCAGAATTGAGTTTTAGAACCCAGCCTGGCTTACCCAGGGAGACTGTCTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR-3UTR CCA 90 bp | CATGAGACAGTCTCCCTGGGTAAGCCAGGCTGGGTTCTAAAACTCAATTCTGGCAAAAGAAATAAAGGGTaGGTGGATACTGGTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: HETVSLGKPGWVLKLNSGKRNKG*VDTGCL Trigger: CAGGCAACCAGTATCCACCCACCCTTTATTTCTTTT...GCCAGAATTGAGTTTTAGAACCCAGCCTGGCTTACCCAGGGAGACTGTCTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTTCGATTCCATGAGGACCTTCATGGTTGCAATGAGAGAACCAATTTCAACATCCACACATATACCATaGCATTTGCCCAGCACCACC | + |
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Preference number: 2 (lower is better) Translates to: GFDSMRTFMVAMREPISTSTHIP*HLPSTT Trigger: GGTGGTGCTGGGCAAATGTCATGGTATATGTGTGGA...TGTTGAAATTGGTTCTCTCATTGCAACCATGAAGGTCCTCATGGAATCGAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTTCGATTCCATGAGGACCTTCATGGTTGCAATGAGAGAACCAATTTCAACAGGTTCCATTGAGACCTaGGTTCAGACCAGAACCATA | + |
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Preference number: 2 (lower is better) Translates to: GFDSMRTFMVAMREPISTGSIET*VQTRTI Trigger: TATGGTTCTGGTCTGAACCCAGGTCTCAATGGAACC...TGTTGAAATTGGTTCTCTCATTGCAACCATGAAGGTCCTCATGGAATCGAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTGCAATGAGAGAACCAATTTCAACAGGTTGTCCTCTGACCTCCACACATATTTTGGGGCTGTAGCTTaGTTATGTGATATATCCATA | + |
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Preference number: 2 (lower is better) Translates to: GCNERTNFNRLSSDLHTYFGAVA*LCDISI Trigger: TATGGATATATCACATAAGCAAGCTACAGCCCCAAA...ATATGTGTGGAGGTCAGAGGACAACCTGTTGAAATTGGTTCTCTCATTGCAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTTCGATTCCATGAGGACCTTCATGGTTGCAATGAGAGAACCAATTTCAACATTTGGGGCTGTAGCTTaGTTATGTGATATATCCATA | + |
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Preference number: 2 (lower is better) Translates to: GFDSMRTFMVAMREPISTFGAVA*LCDISI Trigger: TATGGATATATCACATAAGCAAGCTACAGCCCCAAA...TGTTGAAATTGGTTCTCTCATTGCAACCATGAAGGTCCTCATGGAATCGAACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR CCA 72 bp | TCGGACACAACAGCACAGGTCTACAGTCACGACACTTaGGAGATGGTCACAGGAGGATCTGGAGTTCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: SDTTAQVYSHDT*EMVTGGSGVQG Trigger: GCCTTGAACTCCAGATCCTCCTGTGACCATCTCCCAAGTGTCGTGACTGTAGACCTGTGCTGTTGTGTCCGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR TCA 72 bp | AAGCCAGGCTGGGTTCTAAAACTCAATTCTGGCCCCTaGACCTCCCACATGCTGGGATATAGGTTTGCGCCA | + |
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Preference number: 3 (lower is better) Translates to: KPGWVLKLNSGP*TSHMLGYRFAP Trigger: TGGCGCAAACCTATATCCCAGCATGTGGGAGGTTCAGGGGCCAGAATTGAGTTTTAGAACCCAGCCTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR CCA 72 bp | CAACAGCACAGGTCTACAGTCACGACACTTGGGAGATaGTCACAGGAGGATCTGGAGTTCAAGGCCAGACTA | + |
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Preference number: 3 (lower is better) Translates to: QQHRSTVTTLGR*SQEDLEFKARL Trigger: TAGTCTGGCCTTGAACTCCAGATCCTCCTGTGACCATCTCCCAAGTGTCGTGACTGTAGACCTGTGCTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR TCA 72 bp | TGGTTGCCTGGGGTTTGGGGCTGTAGCTTGCTTATGTaGTATATCCATAAGCCCTGGGTTCCATTGAGACCT | + |
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Preference number: 3 (lower is better) Translates to: WLPGVWGCSLLM*YIHKPWVPLRP Trigger: AGGTCTCAATGGAACCCAGGGCTTATGGATATATCACATAAGCAAGCTACAGCCCCAAACCCCAGGCAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR GCA 72 bp | GTGGATACTGGTTGCCTGGGGTTTGGGGCTGTAGCTTaGTTATGTGATATATCCATAAGCCCTGGGTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: VDTGCLGFGAVA*LCDISISPGFH Trigger: ATGGAACCCAGGGCTTATGGATATATCACATAAGCAAGCTACAGCCCCAAACCCCAGGCAACCAGTATCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR TCA 72 bp | AAAGAACGCATTATAAGACAGGACACCTCTGGCCAGTaGTGTGACTCAGCAGGTAAAGGTGTTTGCTGCCAA | + |
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Preference number: 3 (lower is better) Translates to: KERIIRQDTSGQ*CDSAGKGVCCQ Trigger: TTGGCAGCAAACACCTTTACCTGCTGAGTCACATCACTGGCCAGAGGTGTCCTGTCTTATAATGCGTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR-3UTR CAA 90 bp | GGGTTCGATTCCATGAGGACCTTCATGGTTGCAATGAGAGAACCAATTTCAACAGGCCAGGAAATTCTCTaGTTCTCTGTTATCCAACCC | + |
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Preference number: 3 (lower is better) Translates to: GFDSMRTFMVAMREPISTGQEIL*FSVIQP Trigger: GGGTTGGATAACAGAGAACAAGAGAATTTCCTGGCC...TGTTGAAATTGGTTCTCTCATTGCAACCATGAAGGTCCTCATGGAATCGAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR GCA 90 bp | TCCCACATGCTGGGATATAGGTTTGCGCCACCACACCCAGGTCTTCTTTCACATTGGAGCGCGTGGCCTTaGGACTCCAGGTCCGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: SHMLGYRFAPPHPGLLSHWSAWP*DSRSGA Trigger: TGCTCCGGACCTGGAGTCGCAAGGCCACGCGCTCCA...ATGTGAAAGAAGACCTGGGTGTGGTGGCGCAAACCTATATCCCAGCATGTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR GCA 90 bp | ATGGTCACAGGAGGATCTGGAGTTCAAGGCCAGACTACCCTACATGAGACCTTGTGGAGCGCGTGGCCTTaGGACTCCAGGTCCGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: MVTGGSGVQGQTTLHETLWSAWP*DSRSGA Trigger: TGCTCCGGACCTGGAGTCGCAAGGCCACGCGCTCCA...CAAGGTCTCATGTAGGGTAGTCTGGCCTTGAACTCCAGATCCTCCTGTGACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR TCA 90 bp | ATGGTCACAGGAGGATCTGGAGTTCAAGGCCAGACTACCCTACATGAGACCTTGGTCCCGCGGACCTTCTaGCACCAGATGGGCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: MVTGGSGVQGQTTLHETLVPRTF*HQMGLN Trigger: GTTCAAGCCCATCTGGTGTCAGAAGGTCCGCGGGAC...CAAGGTCTCATGTAGGGTAGTCTGGCCTTGAACTCCAGATCCTCCTGTGACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR TCA 90 bp | GGCCAGGAAATTCTCTTGTTCTCTGTTATCCAACCCCTGGAGGTCATCATTAGGCAGCCATCACCACTTTaGGCGTCTTGGTGGAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: GQEILLFSVIQPLEVIIRQPSPL*ASWWSA Trigger: CGCGCTCCACCAAGACGCTCAAAGTGGTGATGGCTG...CCTAATGATGACCTCCAGGGGTTGGATAACAGAGAACAAGAGAATTTCCTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR CCA 90 bp | ATGGTCACAGGAGGATCTGGAGTTCAAGGCCAGACTACCCTACATGAGACCTTGCCACAGCCTTCTCTTTaGGGAAGCTACCCCCACCAT | + |
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Preference number: 4 (lower is better) Translates to: MVTGGSGVQGQTTLHETLPQPSL*GSYPHH Trigger: ATGGTGGGGGTAGCTTCCCCAAAGAGAAGGCTGTGG...CAAGGTCTCATGTAGGGTAGTCTGGCCTTGAACTCCAGATCCTCCTGTGACCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR CCA 90 bp | CATGAGACAGTCTCCCTGGGTAAGCCAGGCTGGGTTCTAAAACTCAATTCTGGCCTTAGGAGTCGTCCATaGAAACCCTGGCCAGCCATG | + |
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Preference number: 4 (lower is better) Translates to: HETVSLGKPGWVLKLNSGLRSRP*KPWPAM Trigger: CATGGCTGGCCAGGGTTTCCATGGACGACTCCTAAG...GCCAGAATTGAGTTTTAGAACCCAGCCTGGCTTACCCAGGGAGACTGTCTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR TCA 90 bp | CATGAGACAGTCTCCCTGGGTAAGCCAGGCTGGGTTCTAAAACTCAATTCTGGCCGAAGGATGGAATGGTaGGGAGCAATGCTAAGACCC | + |
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Preference number: 4 (lower is better) Translates to: HETVSLGKPGWVLKLNSGRRMEW*GAMLRP Trigger: GGGTCTTAGCATTGCTCCTCACCATTCCATCCTTCG...GCCAGAATTGAGTTTTAGAACCCAGCCTGGCTTACCCAGGGAGACTGTCTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR TCA 90 bp | TCATATACTGTTTATTTGGATCTCATGAGACAGTCTCCCTGGGTAAGCCAGGCTGTCCCGCGGACCTTCTaGCACCAGATGGGCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SYTVYLDLMRQSPWVSQAVPRTF*HQMGLN Trigger: GTTCAAGCCCATCTGGTGTCAGAAGGTCCGCGGGAC...AGCCTGGCTTACCCAGGGAGACTGTCTCATGAGATCCAAATAAACAGTATATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR TCA 90 bp | GGGTTCGATTCCATGAGGACCTTCATGGTTGCAATGAGAGAACCAATTTCAACACAGCCATCACCACTTTaGGCGTCTTGGTGGAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: GFDSMRTFMVAMREPISTQPSPL*ASWWSA Trigger: CGCGCTCCACCAAGACGCTCAAAGTGGTGATGGCTG...TGTTGAAATTGGTTCTCTCATTGCAACCATGAAGGTCCTCATGGAATCGAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR CCA 90 bp | GGGTTCGATTCCATGAGGACCTTCATGGTTGCAATGAGAGAACCAATTTCAACACCATCAGCCGCAGGATaGCCACAGCCTTCTCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GFDSMRTFMVAMREPISTPSAAG*PQPSLW Trigger: CCAAAGAGAAGGCTGTGGCCATCCTGCGGCTGATGG...TGTTGAAATTGGTTCTCTCATTGCAACCATGAAGGTCCTCATGGAATCGAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR CCA 90 bp | CAGAAAATTAAACATGCAAAGAGAAGGAAGGAAGGAAGGAGGAGAGGCAGGAGGCTTAGGAGTCGTCCATaGAAACCCTGGCCAGCCATG | + |
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Preference number: 4 (lower is better) Translates to: QKIKHAKRRKEGRRRGRRLRSRP*KPWPAM Trigger: CATGGCTGGCCAGGGTTTCCATGGACGACTCCTAAG...CCTCCTGCCTCTCCTCCTTCCTTCCTTCCTTCTCTTTGCATGTTTAATTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR TCA 90 bp | TCATATACTGTTTATTTGGATCTCATGAGACAGTCTCCCTGGGTAAGCCAGGCTGACACCAGATGGGCTTaGACACCAGCAGGAAACGGT | + |
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Preference number: 4 (lower is better) Translates to: SYTVYLDLMRQSPWVSQADTRWA*TPAGNG Trigger: ACCGTTTCCTGCTGGTGTTCAAGCCCATCTGGTGTC...AGCCTGGCTTACCCAGGGAGACTGTCTCATGAGATCCAAATAAACAGTATATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR CCA 90 bp | GGGTTCGATTCCATGAGGACCTTCATGGTTGCAATGAGAGAACCAATTTCAACACCACAGCCTTCTCTTTaGGGAAGCTACCCCCACCAT | + |
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Preference number: 4 (lower is better) Translates to: GFDSMRTFMVAMREPISTPQPSL*GSYPHH Trigger: ATGGTGGGGGTAGCTTCCCCAAAGAGAAGGCTGTGG...TGTTGAAATTGGTTCTCTCATTGCAACCATGAAGGTCCTCATGGAATCGAACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR TCA 90 bp | AAATTCTCTTGTTCTCTGTTATCCAACCCCTGGAGGTCATCATTAGGTGTATCTCGAAGGATGGAATGGTaGGGAGCAATGCTAAGACCC | + |
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Preference number: 4 (lower is better) Translates to: KFSCSLLSNPWRSSLGVSRRMEW*GAMLRP Trigger: GGGTCTTAGCATTGCTCCTCACCATTCCATCCTTCG...AGATACACCTAATGATGACCTCCAGGGGTTGGATAACAGAGAACAAGAGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR GCA 90 bp | TCATATACTGTTTATTTGGATCTCATGAGACAGTCTCCCTGGGTAAGCCAGGCTAAGTCTTGCTATCCCTaGCCACTGAATCCTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SYTVYLDLMRQSPWVSQAKSCYP*PLNPQR Trigger: TCTCTGAGGATTCAGTGGGCAGGGATAGCAAGACTT...AGCCTGGCTTACCCAGGGAGACTGTCTCATGAGATCCAAATAAACAGTATATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR GCA 90 bp | GGGTTCGATTCCATGAGGACCTTCATGGTTGCAATGAGAGAACCAATTTCAACAAAGTCTTGCTATCCCTaGCCACTGAATCCTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: GFDSMRTFMVAMREPISTKSCYP*PLNPQR Trigger: TCTCTGAGGATTCAGTGGGCAGGGATAGCAAGACTT...TGTTGAAATTGGTTCTCTCATTGCAACCATGAAGGTCCTCATGGAATCGAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR CAA 72 bp | CTTCATGGTTGCAATGAGAGAACCAATTTCAACAGGTaGTCCTCTGACCTCCACACATATACCATGACATTT | + |
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Preference number: 4 (lower is better) Translates to: LHGCNERTNFNR*SSDLHTYTMTF Trigger: AAATGTCATGGTATATGTGTGGAGGTCAGAGGACAACCTGTTGAAATTGGTTCTCTCATTGCAACCATGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| 3UTR CAA 72 bp | CAAAACCATTCCCATGCTTGCATGATACTTCTGGTGTaGATCTGTACATATTTTCTAGCCAACACATACACT | + |
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Preference number: 4 (lower is better) Translates to: QNHSHACMILLV*ICTYFLANTYT Trigger: AGTGTATGTGTTGGCTAGAAAATATGTACAGATCAACACCAGAAGTATCATGCAAGCATGGGAATGGTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS TCA 90 bp | GCCACTCCACAGGCCATCCATGCCAGGCCAGTCCCGCGGACCTTCTaGCACCAGATGGGCTTGAACACCAGCAGGAAACGGTCGGCACTA | + |
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Preference number: 5 (lower is better) Translates to: ATPQAIHARPVPRTF*HQMGLNTSRKRSAL Trigger: TAGTGCCGACCGTTTCCTGCTGGTGTTCAAGCCCATCTGGTGTCAGAAGGTCCGCGGGACTGGCCTGGCATGGATGGCCTGTGGAGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 ENSMUST00000209442.2 |
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| CDS-3UTR CAA 90 bp | ATGGTCACAGGAGGATCTGGAGTTCAAGGCCAGACTACCCTACATGAGACCTTGATACTGGCGTACATGTaGAGCAGGATGAGCGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: MVTGGSGVQGQTTLHETLILAYM*SRMSEG Trigger: GCCCTCGCTCATCCTGCTCAACATGTACGCCAGTAT...CAAGGTCTCATGTAGGGTAGTCTGGCCTTGAACTCCAGATCCTCCTGTGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR CAA 90 bp | TCCCACATGCTGGGATATAGGTTTGCGCCACCACACCCAGGTCTTCTTTCACATATACTGGCGTACATGTaGAGCAGGATGAGCGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SHMLGYRFAPPHPGLLSHILAYM*SRMSEG Trigger: GCCCTCGCTCATCCTGCTCAACATGTACGCCAGTAT...ATGTGAAAGAAGACCTGGGTGTGGTGGCGCAAACCTATATCCCAGCATGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR CAA 90 bp | GGCCAGGAAATTCTCTTGTTCTCTGTTATCCAACCCCTGGAGGTCATCATTAGGACAGCCATCACCACTTaGAGCGTCTTGGTGGAGCGC | + |
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Preference number: 5 (lower is better) Translates to: GQEILLFSVIQPLEVIIRTAITT*SVLVER Trigger: GCGCTCCACCAAGACGCTCAAAGTGGTGATGGCTGT...CCTAATGATGACCTCCAGGGGTTGGATAACAGAGAACAAGAGAATTTCCTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS-3UTR CAA 90 bp | TCATATACTGTTTATTTGGATCTCATGAGACAGTCTCCCTGGGTAAGCCAGGCTACAGCCATCACCACTTaGAGCGTCTTGGTGGAGCGC | + |
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Preference number: 5 (lower is better) Translates to: SYTVYLDLMRQSPWVSQATAITT*SVLVER Trigger: GCGCTCCACCAAGACGCTCAAAGTGGTGATGGCTGT...AGCCTGGCTTACCCAGGGAGACTGTCTCATGAGATCCAAATAAACAGTATATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS TCA 90 bp | GGGGAAGCTACCCCCACCATAGTTAATACCACATACAGTGTGCTCTaGGTAGAAGTCCTTATATGCCTCCCGGTACACGAAGGATGGAAT | + |
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Preference number: 5 (lower is better) Translates to: GEATPTIVNTTYSVL*VEVLICLPVHEGWN Trigger: ATTCCATCCTTCGTGTACCGGGAGGCATATAAGGACTTCTACTCAGAGCACACTGTATGTGGTATTAACTATGGTGGGGGTAGCTTCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS CAA 90 bp | CACGAGAGGAGGTCGGCCACCGCCAGATTCAGAAACCAGATGGCGTaGACGGCCCGTCTGGCCTCGAAGGCTGTCACCCACACCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: HERRSATARFRNQMA*TARLASKAVTHTTR Trigger: CCTGGTGGTGTGGGTGACAGCCTTCGAGGCCAGACGGGCCGTCAACGCCATCTGGTTTCTGAATCTGGCGGTGGCCGACCTCCTCTCGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 ENSMUST00000209442.2 |
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| CDS CAA 72 bp | AGGTCGGCCACCGCCAGATTCAGAAACCAGATGGCGTaGACGGCCCGTCTGGCCTCGAAGGCTGTCACCCAC | + |
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Preference number: 6 (lower is better) Translates to: RSATARFRNQMA*TARLASKAVTH Trigger: GTGGGTGACAGCCTTCGAGGCCAGACGGGCCGTCAACGCCATCTGGTTTCTGAATCTGGCGGTGGCCGACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 ENSMUST00000209442.2 |
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| CDS CAA 90 bp | CGGTCGGCACTAATGGTAGCCAGCAGCAGGATACTGGCGTACATGTaGAGCAGGATGAGCGAGGGCAGGACTATACAGGCGGTGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: RSALMVASSRILAYM*SRMSEGRTIQAVAS Trigger: TGATGCCACCGCCTGTATAGTCCTGCCCTCGCTCATCCTGCTCAACATGTACGCCAGTATCCTGCTGCTGGCTACCATTAGTGCCGACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 ENSMUST00000209442.2 |
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| CDS CAA 90 bp | AAGATAAAGAAACAGATGACCACAGCCATCACCACTTTGAGCGTCTaGGTGGAGCGCGTGGCCTTGCGACTCCAGGTCCGGAGCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: KIKKQMTTAITTLSV*VERVALRLQVRSRR Trigger: CCTCCTGCTCCGGACCTGGAGTCGCAAGGCCACGCGCTCCACCAAGACGCTCAAAGTGGTGATGGCTGTGGTCATCTGTTTCTTTATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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| CDS GCA 72 bp | TCCCACCAGGAACACCACCGAGTAGATGATAAGGGCTaGAACATCCCCAGGTTGCCGCTTCGGGAGGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: SHQEHHRVDDKG*NIPRLPLREVN Trigger: ATTCACCTCCCGAAGCGGCAACCTGGGGATGTTGCAGCCCTTATCATCTACTCGGTGGTGTTCCTGGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 ENSMUST00000209442.2 |
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| CDS CAA 72 bp | CACCGAGTAGATGATAAGGGCTGCAACATCCCCAGGTaGCCGCTTCGGGAGGTGAATGCCATCCGCAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: HRVDDKGCNIPR*PLREVNAIRRY Trigger: ATACCTGCGGATGGCATTCACCTCCCGAAGCGGCAACCTGGGGATGTTGCAGCCCTTATCATCTACTCGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 ENSMUST00000209442.2 |
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| CDS CAA 90 bp | CAGGAACACCACCGAGTAGATGATAAGGGCTGCAACATCCCCAGGTaGCCGCTTCGGGAGGTGAATGCCATCCGCAGGTATGTTAGGATC | + |
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Preference number: 6 (lower is better) Translates to: QEHHRVDDKGCNIPR*PLREVNAIRRYVRI Trigger: GATCCTAACATACCTGCGGATGGCATTCACCTCCCGAAGCGGCAACCTGGGGATGTTGCAGCCCTTATCATCTACTCGGTGGTGTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 ENSMUST00000209442.2 |
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| CDS TCA 72 bp | CCTTATATGCCTCCCGGTACACGAAGGATGGAATGGTaGGGAGCAATGCTAAGACCCAGGCCACTCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: PYMPPGTRRMEW*GAMLRPRPLHR Trigger: CCTGTGGAGTGGCCTGGGTCTTAGCATTGCTCCTCACCATTCCATCCTTCGTGTACCGGGAGGCATATAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 ENSMUST00000209442.2 |
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| CDS CAA 72 bp | CTAATGGTAGCCAGCAGCAGGATACTGGCGTACATGTaGAGCAGGATGAGCGAGGGCAGGACTATACAGGCG | + |
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Preference number: 6 (lower is better) Translates to: LMVASSRILAYM*SRMSEGRTIQA Trigger: CGCCTGTATAGTCCTGCCCTCGCTCATCCTGCTCAACATGTACGCCAGTATCCTGCTGCTGGCTACCATTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 ENSMUST00000209442.2 |
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| CDS TCA 72 bp | ACCCCCACCATAGTTAATACCACATACAGTGTGCTCTaGGTAGAAGTCCTTATATGCCTCCCGGTACACGAA | + |
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Preference number: 6 (lower is better) Translates to: TPTIVNTTYSVL*VEVLICLPVHE Trigger: TTCGTGTACCGGGAGGCATATAAGGACTTCTACTCAGAGCACACTGTATGTGGTATTAACTATGGTGGGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050770.6 ENSMUST00000168818.2 |
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